Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380018004.01.T01 | XP_003603961.1 | 71.574 | 197 | 14 | 2 | 85 | 239 | 173 | 369 | 2.85E-84 | 265 |
| MsG0380018004.01.T01 | XP_003603961.1 | 95.833 | 72 | 3 | 0 | 5 | 76 | 15 | 86 | 3.04E-39 | 149 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380018004.01.T01 | Q9FYZ9 | 27.714 | 350 | 135 | 8 | 5 | 238 | 17 | 364 | 1.71E-29 | 116 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380018004.01.T01 | G7J763 | 71.574 | 197 | 14 | 2 | 85 | 239 | 173 | 369 | 1.36e-84 | 265 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048509.01 | MsG0380018004.01 | 0.851205 | 1.032634e-60 | 2.074415e-57 |
| MsG0180000367.01 | MsG0380018004.01 | 0.815521 | 8.861441e-52 | 6.123632e-49 |
| MsG0180000497.01 | MsG0380018004.01 | 0.832927 | 7.149489e-56 | 8.108060e-53 |
| MsG0180001079.01 | MsG0380018004.01 | 0.808530 | 2.959867e-50 | 1.696475e-47 |
| MsG0180001290.01 | MsG0380018004.01 | 0.820640 | 6.163987e-53 | 4.904189e-50 |
| MsG0180001497.01 | MsG0380018004.01 | 0.829401 | 5.256262e-55 | 5.374035e-52 |
| MsG0180002808.01 | MsG0380018004.01 | 0.844645 | 6.651364e-59 | 1.080793e-55 |
| MsG0180003320.01 | MsG0380018004.01 | 0.812807 | 3.521193e-51 | 2.260468e-48 |
| MsG0180003375.01 | MsG0380018004.01 | 0.832421 | 9.545418e-56 | 1.066381e-52 |
| MsG0180003483.01 | MsG0380018004.01 | 0.807702 | 4.441616e-50 | 2.490951e-47 |
| MsG0180003484.01 | MsG0380018004.01 | 0.832022 | 1.198428e-55 | 1.323193e-52 |
| MsG0180003504.01 | MsG0380018004.01 | 0.835211 | 1.914800e-56 | 2.325791e-53 |
| MsG0180004549.01 | MsG0380018004.01 | 0.801119 | 1.046508e-48 | 4.957832e-46 |
| MsG0180004652.01 | MsG0380018004.01 | 0.805475 | 1.311352e-49 | 6.944265e-47 |
| MsG0180004705.01 | MsG0380018004.01 | 0.852314 | 5.008705e-61 | 1.042510e-57 |
| MsG0180004942.01 | MsG0380018004.01 | 0.802454 | 5.566345e-49 | 2.727855e-46 |
| MsG0180004948.01 | MsG0380018004.01 | 0.824875 | 6.368141e-54 | 5.712450e-51 |
| MsG0180005096.01 | MsG0380018004.01 | 0.823421 | 1.398125e-53 | 1.203155e-50 |
| MsG0180005353.01 | MsG0380018004.01 | 0.800176 | 1.629733e-48 | 7.537864e-46 |
| MsG0180005623.01 | MsG0380018004.01 | 0.808409 | 3.141174e-50 | 1.794717e-47 |
| MsG0180005757.01 | MsG0380018004.01 | 0.855310 | 6.875103e-62 | 1.580665e-58 |
| MsG0180006182.01 | MsG0380018004.01 | 0.815205 | 1.041375e-51 | 7.133651e-49 |
| MsG0180006191.01 | MsG0380018004.01 | 0.858957 | 5.763773e-63 | 1.497287e-59 |
| MsG0280006316.01 | MsG0380018004.01 | 0.815874 | 7.390363e-52 | 5.156329e-49 |
| MsG0280010617.01 | MsG0380018004.01 | 0.818168 | 2.256484e-52 | 1.676490e-49 |
| MsG0280011016.01 | MsG0380018004.01 | 0.811949 | 5.420447e-51 | 3.401062e-48 |
| MsG0380011686.01 | MsG0380018004.01 | 0.825971 | 3.503535e-54 | 3.242427e-51 |
| MsG0380011974.01 | MsG0380018004.01 | 0.806529 | 7.869099e-50 | 4.281084e-47 |
| MsG0380012889.01 | MsG0380018004.01 | 0.803765 | 2.982608e-49 | 1.511476e-46 |
| MsG0380012900.01 | MsG0380018004.01 | 0.839058 | 1.987903e-57 | 2.713369e-54 |
| MsG0380013041.01 | MsG0380018004.01 | 0.818392 | 2.007662e-52 | 1.500980e-49 |
| MsG0380013415.01 | MsG0380018004.01 | 0.851702 | 7.470459e-61 | 1.524906e-57 |
| MsG0380014410.01 | MsG0380018004.01 | 0.805516 | 1.285803e-49 | 6.815896e-47 |
| MsG0380014734.01 | MsG0380018004.01 | 0.824421 | 8.144532e-54 | 7.210179e-51 |
| MsG0380015323.01 | MsG0380018004.01 | 0.803240 | 3.830932e-49 | 1.915349e-46 |
| MsG0380015572.01 | MsG0380018004.01 | 0.800806 | 1.212485e-48 | 5.698501e-46 |
| MsG0380016372.01 | MsG0380018004.01 | 0.825598 | 4.295847e-54 | 3.933543e-51 |
| MsG0380016485.01 | MsG0380018004.01 | 0.836923 | 7.038990e-57 | 9.000776e-54 |
| MsG0380017030.01 | MsG0380018004.01 | 0.802543 | 5.336321e-49 | 2.621007e-46 |
| MsG0380017898.01 | MsG0380018004.01 | 0.833242 | 5.967714e-56 | 6.832397e-53 |
| MsG0380017901.01 | MsG0380018004.01 | 0.843902 | 1.052586e-58 | 1.671257e-55 |
| MsG0380018004.01 | MsG0480018362.01 | 0.808525 | 2.968102e-50 | 1.700972e-47 |
| MsG0380018004.01 | MsG0480018440.01 | 0.808930 | 2.431530e-50 | 1.408277e-47 |
| MsG0380018004.01 | MsG0480018559.01 | 0.812224 | 4.721066e-51 | 2.984667e-48 |
| MsG0380018004.01 | MsG0480018563.01 | 0.822280 | 2.577332e-53 | 2.147611e-50 |
| MsG0380018004.01 | MsG0480018613.01 | 0.806676 | 7.327535e-50 | 4.001292e-47 |
| MsG0380018004.01 | MsG0480019024.01 | 0.802475 | 5.511664e-49 | 2.702430e-46 |
| MsG0380018004.01 | MsG0480019510.01 | 0.849840 | 2.497327e-60 | 4.796669e-57 |
| MsG0380018004.01 | MsG0480019545.01 | 0.813175 | 2.923124e-51 | 1.895195e-48 |
| MsG0380018004.01 | MsG0480019663.01 | 0.806199 | 9.236576e-50 | 4.983074e-47 |
| MsG0380018004.01 | MsG0480019935.01 | 0.817997 | 2.466474e-52 | 1.823976e-49 |
| MsG0380018004.01 | MsG0480020722.01 | 0.841085 | 5.884239e-58 | 8.550174e-55 |
| MsG0380018004.01 | MsG0480021129.01 | 0.804761 | 1.849381e-49 | 9.615710e-47 |
| MsG0380018004.01 | MsG0480021133.01 | 0.806347 | 8.597598e-50 | 4.655634e-47 |
| MsG0380018004.01 | MsG0480021361.01 | 0.801995 | 6.919584e-49 | 3.351461e-46 |
| MsG0380018004.01 | MsG0480021396.01 | 0.827928 | 1.192824e-54 | 1.168112e-51 |
| MsG0380018004.01 | MsG0480021433.01 | 0.847940 | 8.413706e-60 | 1.519548e-56 |
| MsG0380018004.01 | MsG0480022309.01 | 0.821857 | 3.231124e-53 | 2.660084e-50 |
| MsG0380018004.01 | MsG0480022428.01 | 0.820871 | 5.455240e-53 | 4.368908e-50 |
| MsG0380018004.01 | MsG0480022735.01 | 0.807235 | 5.579963e-50 | 3.091656e-47 |
| MsG0380018004.01 | MsG0480022833.01 | 0.856110 | 4.013942e-62 | 9.476308e-59 |
| MsG0380018004.01 | MsG0480022886.01 | 0.839731 | 1.329521e-57 | 1.852521e-54 |
| MsG0380018004.01 | MsG0480023322.01 | 0.866597 | 2.537599e-65 | 8.601476e-62 |
| MsG0380018004.01 | MsG0480023364.01 | 0.800280 | 1.551884e-48 | 7.197200e-46 |
| MsG0380018004.01 | MsG0580024218.01 | 0.801476 | 8.843688e-49 | 4.227533e-46 |
| MsG0380018004.01 | MsG0580025023.01 | 0.839682 | 1.368873e-57 | 1.904531e-54 |
| MsG0380018004.01 | MsG0580025431.01 | 0.805459 | 1.321691e-49 | 6.996307e-47 |
| MsG0380018004.01 | MsG0580025432.01 | 0.823369 | 1.437733e-53 | 1.235385e-50 |
| MsG0380018004.01 | MsG0580025507.01 | 0.835059 | 2.091225e-56 | 2.528186e-53 |
| MsG0380018004.01 | MsG0580025620.01 | 0.803258 | 3.799023e-49 | 1.900249e-46 |
| MsG0380018004.01 | MsG0580025633.01 | 0.817101 | 3.926235e-52 | 2.832970e-49 |
| MsG0380018004.01 | MsG0580026162.01 | 0.805917 | 1.059176e-49 | 5.673039e-47 |
| MsG0380018004.01 | MsG0580026311.01 | 0.840543 | 8.164459e-58 | 1.166749e-54 |
| MsG0380018004.01 | MsG0580027036.01 | 0.803970 | 2.703451e-49 | 1.377278e-46 |
| MsG0380018004.01 | MsG0580027337.01 | 0.805570 | 1.252150e-49 | 6.647006e-47 |
| MsG0380018004.01 | MsG0580028302.01 | 0.844420 | 7.644238e-59 | 1.233381e-55 |
| MsG0380018004.01 | MsG0580028490.01 | 0.807435 | 5.062733e-50 | 2.819587e-47 |
| MsG0380018004.01 | MsG0580028565.01 | 0.836134 | 1.118293e-56 | 1.396513e-53 |
| MsG0380018004.01 | MsG0580029438.01 | 0.820641 | 6.162521e-53 | 4.903068e-50 |
| MsG0380018004.01 | MsG0680030296.01 | 0.805218 | 1.484702e-49 | 7.810454e-47 |
| MsG0380018004.01 | MsG0680030613.01 | 0.831891 | 1.290631e-55 | 1.419731e-52 |
| MsG0380018004.01 | MsG0680031464.01 | 0.806637 | 7.467065e-50 | 4.073358e-47 |
| MsG0380018004.01 | MsG0680031474.01 | 0.802453 | 5.571013e-49 | 2.730007e-46 |
| MsG0380018004.01 | MsG0680031841.01 | 0.810718 | 1.002508e-50 | 6.088629e-48 |
| MsG0380018004.01 | MsG0680033467.01 | 0.812893 | 3.370502e-51 | 2.168848e-48 |
| MsG0380018004.01 | MsG0680034330.01 | 0.812310 | 4.520953e-51 | 2.864660e-48 |
| MsG0380018004.01 | MsG0680034333.01 | 0.820861 | 5.484312e-53 | 4.390934e-50 |
| MsG0380018004.01 | MsG0680034354.01 | 0.805140 | 1.541286e-49 | 8.092159e-47 |
| MsG0380018004.01 | MsG0680034362.01 | 0.818520 | 1.878084e-52 | 1.409050e-49 |
| MsG0380018004.01 | MsG0680034418.01 | 0.818563 | 1.836361e-52 | 1.379310e-49 |
| MsG0380018004.01 | MsG0680034978.01 | 0.803564 | 3.283055e-49 | 1.655253e-46 |
| MsG0380018004.01 | MsG0780036370.01 | 0.813887 | 2.038781e-51 | 1.347737e-48 |
| MsG0380018004.01 | MsG0780036480.01 | 0.825639 | 4.200601e-54 | 3.850748e-51 |
| MsG0380018004.01 | MsG0780036611.01 | 0.800637 | 1.312824e-48 | 6.143804e-46 |
| MsG0380018004.01 | MsG0780038307.01 | 0.837919 | 3.911282e-57 | 5.156521e-54 |
| MsG0380018004.01 | MsG0780038519.01 | 0.814964 | 1.178284e-51 | 8.019081e-49 |
| MsG0380018004.01 | MsG0780038810.01 | 0.843751 | 1.155753e-58 | 1.826126e-55 |
| MsG0380018004.01 | MsG0780039237.01 | 0.803229 | 3.851838e-49 | 1.925204e-46 |
| MsG0380018004.01 | MsG0780039619.01 | 0.835630 | 1.500717e-56 | 1.845633e-53 |
| MsG0380018004.01 | MsG0780039773.01 | 0.800309 | 1.530801e-48 | 7.105015e-46 |
| MsG0380018004.01 | MsG0780039883.01 | 0.825627 | 4.228826e-54 | 3.875331e-51 |
| MsG0380018004.01 | MsG0780039916.01 | 0.876100 | 1.825930e-68 | 8.741795e-65 |
| MsG0380018004.01 | MsG0780039923.01 | 0.828907 | 6.924402e-55 | 6.976518e-52 |
| MsG0380018004.01 | MsG0780039925.01 | 0.848434 | 6.145554e-60 | 1.127664e-56 |
| MsG0380018004.01 | MsG0780040021.01 | 0.804352 | 2.251071e-49 | 1.158101e-46 |
| MsG0380018004.01 | MsG0780040022.01 | 0.836254 | 1.041991e-56 | 1.306146e-53 |
| MsG0380018004.01 | MsG0780040560.01 | 0.831952 | 1.246491e-55 | 1.373547e-52 |
| MsG0380018004.01 | MsG0780040808.01 | 0.812419 | 4.280774e-51 | 2.720537e-48 |
| MsG0380018004.01 | MsG0780040878.01 | 0.823462 | 1.367335e-53 | 1.178084e-50 |
| MsG0380018004.01 | MsG0780040977.01 | 0.806423 | 8.285141e-50 | 4.495207e-47 |
| MsG0380018004.01 | MsG0780041036.01 | 0.802228 | 6.196480e-49 | 3.019125e-46 |
| MsG0380018004.01 | MsG0780041180.01 | 0.881246 | 2.815537e-70 | 1.637155e-66 |
| MsG0380018004.01 | MsG0780041397.01 | 0.843862 | 1.079279e-58 | 1.711388e-55 |
| MsG0380018004.01 | MsG0880042122.01 | 0.827417 | 1.582535e-54 | 1.526976e-51 |
| MsG0380018004.01 | MsG0880042591.01 | 0.808373 | 3.196927e-50 | 1.824886e-47 |
| MsG0380018004.01 | MsG0880042633.01 | 0.840102 | 1.064194e-57 | 1.500330e-54 |
| MsG0380018004.01 | MsG0880042635.01 | 0.866391 | 2.950290e-65 | 9.926987e-62 |
| MsG0380018004.01 | MsG0880042644.01 | 0.816866 | 4.433901e-52 | 3.178874e-49 |
| MsG0380018004.01 | MsG0880042810.01 | 0.821304 | 4.335675e-53 | 3.514158e-50 |
| MsG0380018004.01 | MsG0880043550.01 | 0.837442 | 5.185644e-57 | 6.737037e-54 |
| MsG0380018004.01 | MsG0880043882.01 | 0.817777 | 2.765985e-52 | 2.033160e-49 |
| MsG0380018004.01 | MsG0880043953.01 | 0.829975 | 3.809126e-55 | 3.959940e-52 |
| MsG0380018004.01 | MsG0880043998.01 | 0.801589 | 8.384833e-49 | 4.019446e-46 |
| MsG0380018004.01 | MsG0880044688.01 | 0.836552 | 8.751552e-57 | 1.106627e-53 |
| MsG0380018004.01 | MsG0880045128.01 | 0.809867 | 1.530540e-50 | 9.088857e-48 |
| MsG0380018004.01 | MsG0880045645.01 | 0.800855 | 1.184850e-48 | 5.575866e-46 |
| MsG0380018004.01 | MsG0880045686.01 | 0.817733 | 2.828921e-52 | 2.076981e-49 |
| MsG0380018004.01 | MsG0880045852.01 | 0.832761 | 7.862043e-56 | 8.872506e-53 |
| MsG0380018004.01 | MsG0880045854.01 | 0.843200 | 1.622103e-58 | 2.518683e-55 |
| MsG0380018004.01 | MsG0880045856.01 | 0.844426 | 7.615169e-59 | 1.228962e-55 |
| MsG0380018004.01 | MsG0880046071.01 | 0.818811 | 1.612823e-52 | 1.219725e-49 |
| MsG0380018004.01 | MsG0880046137.01 | 0.819575 | 1.080825e-52 | 8.349468e-50 |
| MsG0380018004.01 | MsG0880046402.01 | 0.802067 | 6.688504e-49 | 3.245531e-46 |
| MsG0380018004.01 | MsG0880046693.01 | 0.831115 | 2.003830e-55 | 2.153674e-52 |
| MsG0380018004.01 | MsG0880046932.01 | 0.821896 | 3.164398e-53 | 2.608015e-50 |
| MsG0380018004.01 | MsG0880046945.01 | 0.857470 | 1.597535e-62 | 3.947127e-59 |
| MsG0380018004.01 | MsG0880047057.01 | 0.865574 | 5.349136e-65 | 1.748867e-61 |
| MsG0380018004.01 | MsG0880047450.01 | 0.841369 | 4.954478e-58 | 7.264449e-55 |
| MsG0380018004.01 | MsG0880047714.01 | 0.854822 | 9.529600e-62 | 2.155672e-58 |
| MsG0280006829.01 | MsG0380018004.01 | 0.807988 | 3.862212e-50 | 2.182283e-47 |
| MsG0280006851.01 | MsG0380018004.01 | 0.814644 | 1.387086e-51 | 9.359319e-49 |
| MsG0280007199.01 | MsG0380018004.01 | 0.815737 | 7.928976e-52 | 5.512092e-49 |
| MsG0280007281.01 | MsG0380018004.01 | 0.816947 | 4.251102e-52 | 3.054798e-49 |
| MsG0280007786.01 | MsG0380018004.01 | 0.837038 | 6.580453e-57 | 8.444050e-54 |
| MsG0280008226.01 | MsG0380018004.01 | 0.850646 | 1.484506e-60 | 2.927778e-57 |
| MsG0280009167.01 | MsG0380018004.01 | 0.825070 | 5.728683e-54 | 5.167354e-51 |
| MsG0280009232.01 | MsG0380018004.01 | 0.810233 | 1.276173e-50 | 7.651060e-48 |
| MsG0280009521.01 | MsG0380018004.01 | 0.805916 | 1.059332e-49 | 5.673787e-47 |
| MsG0280009526.01 | MsG0380018004.01 | 0.813757 | 2.177124e-51 | 1.434103e-48 |
| MsG0280009767.01 | MsG0380018004.01 | 0.824247 | 8.951863e-54 | 7.885594e-51 |
| MsG0280010410.01 | MsG0380018004.01 | 0.825994 | 3.459083e-54 | 3.203390e-51 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380018004.01.T01 | MTR_3g117060 | 71.574 | 197 | 14 | 2 | 85 | 239 | 173 | 369 | 3.45e-88 | 265 |
| MsG0380018004.01.T01 | MTR_3g117060 | 95.833 | 72 | 3 | 0 | 5 | 76 | 15 | 86 | 3.68e-43 | 149 |
| MsG0380018004.01.T01 | MTR_6g015620 | 96.053 | 76 | 3 | 0 | 164 | 239 | 63 | 138 | 1.00e-44 | 147 |
| MsG0380018004.01.T01 | MTR_7g084620 | 29.944 | 354 | 126 | 10 | 3 | 237 | 13 | 363 | 1.69e-31 | 119 |
| MsG0380018004.01.T01 | MTR_3g467560 | 35.385 | 195 | 84 | 2 | 83 | 237 | 195 | 387 | 4.16e-31 | 118 |
| MsG0380018004.01.T01 | MTR_3g467560 | 52.000 | 75 | 35 | 1 | 3 | 76 | 37 | 111 | 3.74e-16 | 77.0 |
| MsG0380018004.01.T01 | MTR_8g077030 | 31.923 | 260 | 106 | 8 | 5 | 213 | 15 | 254 | 1.50e-26 | 107 |
| MsG0380018004.01.T01 | MTR_7g084350 | 35.385 | 195 | 78 | 4 | 87 | 237 | 173 | 363 | 3.95e-26 | 104 |
| MsG0380018004.01.T01 | MTR_7g084350 | 47.436 | 78 | 40 | 1 | 3 | 79 | 11 | 88 | 6.60e-16 | 76.3 |
| MsG0380018004.01.T01 | MTR_4g018820 | 33.684 | 190 | 88 | 3 | 87 | 238 | 169 | 358 | 1.72e-24 | 100 |
| MsG0380018004.01.T01 | MTR_4g018820 | 47.297 | 74 | 39 | 0 | 3 | 76 | 13 | 86 | 7.68e-16 | 75.9 |
| MsG0380018004.01.T01 | MTR_3g467270 | 32.836 | 201 | 86 | 4 | 87 | 238 | 168 | 368 | 2.94e-23 | 97.1 |
| MsG0380018004.01.T01 | MTR_3g467270 | 47.222 | 72 | 38 | 0 | 5 | 76 | 14 | 85 | 2.13e-14 | 72.0 |
| MsG0380018004.01.T01 | MTR_8g076900 | 30.928 | 194 | 93 | 3 | 87 | 239 | 169 | 362 | 3.86e-22 | 93.6 |
| MsG0380018004.01.T01 | MTR_8g076900 | 44.595 | 74 | 41 | 0 | 3 | 76 | 13 | 86 | 1.33e-12 | 66.6 |
| MsG0380018004.01.T01 | MTR_8g020690 | 29.167 | 192 | 97 | 3 | 87 | 239 | 169 | 360 | 6.12e-22 | 93.2 |
| MsG0380018004.01.T01 | MTR_8g020690 | 50.000 | 70 | 35 | 0 | 6 | 75 | 16 | 85 | 6.93e-13 | 67.4 |
| MsG0380018004.01.T01 | MTR_8g077040 | 29.500 | 200 | 92 | 3 | 87 | 237 | 169 | 368 | 2.94e-21 | 91.3 |
| MsG0380018004.01.T01 | MTR_8g077040 | 51.351 | 74 | 36 | 0 | 3 | 76 | 13 | 86 | 8.30e-18 | 81.6 |
| MsG0380018004.01.T01 | MTR_6g056070 | 31.016 | 187 | 94 | 4 | 87 | 238 | 170 | 356 | 4.50e-21 | 90.9 |
| MsG0380018004.01.T01 | MTR_6g056070 | 49.333 | 75 | 38 | 0 | 2 | 76 | 13 | 87 | 7.54e-15 | 73.2 |
| MsG0380018004.01.T01 | MTR_5g020940 | 25.419 | 358 | 145 | 10 | 3 | 238 | 23 | 380 | 4.74e-21 | 90.9 |
| MsG0380018004.01.T01 | MTR_1g022455 | 31.658 | 199 | 92 | 5 | 83 | 238 | 181 | 378 | 1.46e-20 | 89.4 |
| MsG0380018004.01.T01 | MTR_1g022465 | 32.323 | 198 | 91 | 5 | 83 | 238 | 181 | 377 | 3.98e-20 | 88.2 |
| MsG0380018004.01.T01 | MTR_5g046110 | 34.545 | 165 | 69 | 6 | 83 | 210 | 231 | 393 | 1.05e-19 | 87.4 |
| MsG0380018004.01.T01 | MTR_5g046110 | 39.474 | 76 | 46 | 0 | 3 | 78 | 73 | 148 | 1.98e-13 | 69.3 |
| MsG0380018004.01.T01 | MTR_8g020700 | 30.319 | 188 | 95 | 4 | 87 | 238 | 169 | 356 | 2.41e-19 | 85.9 |
| MsG0380018004.01.T01 | MTR_8g020700 | 46.479 | 71 | 38 | 0 | 5 | 75 | 15 | 85 | 1.06e-11 | 63.9 |
| MsG0380018004.01.T01 | MTR_8g076900 | 48.052 | 77 | 36 | 1 | 87 | 159 | 169 | 245 | 1.20e-17 | 80.1 |
| MsG0380018004.01.T01 | MTR_8g076900 | 44.595 | 74 | 41 | 0 | 3 | 76 | 13 | 86 | 1.35e-12 | 65.9 |
| MsG0380018004.01.T01 | MTR_8g020700 | 41.026 | 78 | 41 | 1 | 87 | 159 | 169 | 246 | 2.12e-12 | 65.5 |
| MsG0380018004.01.T01 | MTR_8g020700 | 46.479 | 71 | 38 | 0 | 5 | 75 | 15 | 85 | 1.23e-11 | 63.2 |
| MsG0380018004.01.T01 | MTR_1g108660 | 25.962 | 208 | 115 | 5 | 59 | 232 | 127 | 329 | 3.15e-11 | 62.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380018004.01.T01 | AT5G38020 | 26.331 | 338 | 125 | 7 | 7 | 221 | 14 | 350 | 4.08e-25 | 102 |
| MsG0380018004.01.T01 | AT3G11480 | 30.366 | 191 | 94 | 3 | 87 | 238 | 189 | 379 | 6.84e-21 | 90.5 |
| MsG0380018004.01.T01 | AT1G19640 | 30.500 | 200 | 89 | 4 | 88 | 237 | 188 | 387 | 4.07e-19 | 85.5 |
| MsG0380018004.01.T01 | AT5G04370 | 27.895 | 190 | 96 | 4 | 90 | 238 | 220 | 409 | 2.73e-16 | 77.8 |
| MsG0380018004.01.T01 | AT5G04370 | 27.895 | 190 | 96 | 4 | 90 | 238 | 206 | 395 | 2.75e-16 | 77.8 |
| MsG0380018004.01.T01 | AT5G04370 | 27.895 | 190 | 96 | 4 | 90 | 238 | 201 | 390 | 3.70e-16 | 77.4 |
| MsG0380018004.01.T01 | AT5G66430 | 27.919 | 197 | 96 | 3 | 88 | 238 | 158 | 354 | 4.06e-16 | 77.0 |
| MsG0380018004.01.T01 | AT5G38020 | 28.191 | 188 | 81 | 4 | 87 | 221 | 125 | 311 | 7.45e-16 | 75.9 |
| MsG0380018004.01.T01 | AT5G04380 | 28.902 | 173 | 79 | 3 | 89 | 217 | 125 | 297 | 3.73e-15 | 73.9 |
| MsG0380018004.01.T01 | AT4G36470 | 29.518 | 166 | 79 | 3 | 83 | 210 | 177 | 342 | 3.84e-15 | 74.3 |
| MsG0380018004.01.T01 | AT4G36470 | 50.820 | 61 | 30 | 0 | 6 | 66 | 19 | 79 | 9.39e-13 | 67.4 |
| MsG0380018004.01.T01 | AT5G04380 | 28.902 | 173 | 79 | 3 | 89 | 217 | 196 | 368 | 5.57e-15 | 73.9 |
| MsG0380018004.01.T01 | AT5G04380 | 29.341 | 167 | 79 | 3 | 89 | 217 | 192 | 357 | 5.76e-15 | 73.6 |
| MsG0380018004.01.T01 | AT3G21950 | 25.698 | 179 | 81 | 3 | 87 | 213 | 164 | 342 | 5.51e-13 | 67.8 |
| MsG0380018004.01.T01 | AT3G21950 | 37.662 | 77 | 44 | 1 | 87 | 159 | 164 | 240 | 1.51e-12 | 66.6 |
Find 40 sgRNAs with CRISPR-Local
Find 130 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATAAGATTATTAAACTTTA+TGG | 0.051266 | 3:+103201280 | MsG0380018004.01.T01:CDS |
| TGCAAATAACTCCACATTTC+AGG | 0.197207 | 3:+103199023 | MsG0380018004.01.T01:CDS |
| TCAGCCACTTTCAAACAATT+TGG | 0.225467 | 3:-103199356 | None:intergenic |
| ACTTTATGGAGTTGAGAAAT+TGG | 0.267027 | 3:+103201294 | MsG0380018004.01.T01:CDS |
| ATCAGGTCCAAATGCACTTT+TGG | 0.294357 | 3:+103199391 | MsG0380018004.01.T01:CDS |
| TAATGGATGAATTATTCATT+AGG | 0.303398 | 3:+103201251 | MsG0380018004.01.T01:CDS |
| GCAATGGTCCTAACACTTAT+TGG | 0.313733 | 3:+103200508 | MsG0380018004.01.T01:CDS |
| CGTTCGTCTGAACTGCTTCC+TGG | 0.322621 | 3:+103200481 | MsG0380018004.01.T01:CDS |
| GATGCAACCAAAAGTGCATT+TGG | 0.356622 | 3:-103199398 | None:intergenic |
| AGAGTTTGGAGAAGAAATAA+TGG | 0.384468 | 3:+103201234 | MsG0380018004.01.T01:CDS |
| CTGGAGGGCTTGCCCTTGTT+AGG | 0.391432 | 3:-103200399 | None:intergenic |
| CATCTCTGCCAATAAGTGTT+AGG | 0.402508 | 3:-103200516 | None:intergenic |
| ATAAATGCATGGGTTGTCAT+TGG | 0.420457 | 3:+103200553 | MsG0380018004.01.T01:CDS |
| GTAAATATTCCCTTGTTCAA+TGG | 0.427132 | 3:-103200377 | None:intergenic |
| GCTGACTTAGGTTGTTCATC+AGG | 0.433358 | 3:+103199374 | MsG0380018004.01.T01:CDS |
| AGAGACAATTAGAACGGATT+GGG | 0.455968 | 3:+103201103 | MsG0380018004.01.T01:intron |
| TAGAGACAATTAGAACGGAT+TGG | 0.473214 | 3:+103201102 | MsG0380018004.01.T01:intron |
| AAAATGAACTTATAAATGCA+TGG | 0.515846 | 3:+103200542 | MsG0380018004.01.T01:CDS |
| ACTGCTTCCTGGTGGTGCAA+TGG | 0.531373 | 3:+103200492 | MsG0380018004.01.T01:CDS |
| AAGGGAATATTTACCTAACA+AGG | 0.547386 | 3:+103200386 | MsG0380018004.01.T01:CDS |
| TGTTTGAAAGTGGCTGACTT+AGG | 0.547633 | 3:+103199362 | MsG0380018004.01.T01:CDS |
| AAATGAACTTATAAATGCAT+GGG | 0.553184 | 3:+103200543 | MsG0380018004.01.T01:CDS |
| TTATGGAGTTGAGAAATTGG+AGG | 0.566069 | 3:+103201297 | MsG0380018004.01.T01:CDS |
| TGCTTTAGAACCATTGAACA+AGG | 0.566704 | 3:+103200367 | MsG0380018004.01.T01:CDS |
| CTTCACATGAATGGAGGTGA+GGG | 0.577850 | 3:+103198990 | None:intergenic |
| ATTAATCATTACCTGAAATG+TGG | 0.578791 | 3:-103199034 | None:intergenic |
| GTTAGGACCATTGCACCACC+AGG | 0.591625 | 3:-103200499 | None:intergenic |
| CCTTCACATGAATGGAGGTG+AGG | 0.602736 | 3:+103198989 | None:intergenic |
| AACAAGGGCAAGCCCTCCAG+CGG | 0.613717 | 3:+103200402 | MsG0380018004.01.T01:CDS |
| TACTTGAAGATAGTATAATG+AGG | 0.631232 | 3:+103199315 | MsG0380018004.01.T01:CDS |
| ACTCAATGACATGGCCGCAG+AGG | 0.644339 | 3:+103200582 | MsG0380018004.01.T01:CDS |
| TGGCATGGCACTCAATGACA+TGG | 0.644988 | 3:+103200573 | MsG0380018004.01.T01:CDS |
| GCAGAGAATGGTGATGCTGA+CGG | 0.652786 | 3:+103199283 | MsG0380018004.01.T01:intron |
| TGCATGGGTTGTCATTGGCA+TGG | 0.666196 | 3:+103200558 | MsG0380018004.01.T01:CDS |
| AGGGAATATTTACCTAACAA+GGG | 0.666854 | 3:+103200387 | MsG0380018004.01.T01:CDS |
| ATGTTGTTTGATTACCTCTG+CGG | 0.673521 | 3:-103200596 | None:intergenic |
| GCTTTAGAACCATTGAACAA+GGG | 0.677096 | 3:+103200368 | MsG0380018004.01.T01:CDS |
| GATGAAGACACAAGAGCTGA+GGG | 0.692498 | 3:+103201166 | MsG0380018004.01.T01:CDS |
| TCGTCTGAACTGCTTCCTGG+TGG | 0.698405 | 3:+103200484 | MsG0380018004.01.T01:CDS |
| TGATGAAGACACAAGAGCTG+AGG | 0.700921 | 3:+103201165 | MsG0380018004.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAATCATATACTATATTA+TGG | - | Chr3:103200235-103200254 | None:intergenic | 10.0% |
| !! | AAAATAAAAGTTGTAATTAA+TGG | + | Chr3:103199994-103200013 | MsG0380018004.01.T01:intron | 10.0% |
| !! | AAATTAATTAAACATTAACA+GGG | - | Chr3:103200319-103200338 | None:intergenic | 10.0% |
| !! | AATAAGATTATTAAACTTTA+TGG | + | Chr3:103201280-103201299 | MsG0380018004.01.T01:CDS | 10.0% |
| !! | TATCATTATACTAATTAATT+TGG | + | Chr3:103200831-103200850 | MsG0380018004.01.T01:intron | 10.0% |
| !!! | TATGTATGTATTATTTTATT+TGG | + | Chr3:103200958-103200977 | MsG0380018004.01.T01:intron | 10.0% |
| !!! | TTTTAAAATATTTTTTATCG+CGG | - | Chr3:103199834-103199853 | None:intergenic | 10.0% |
| !!! | TTTTTAAAATTTATATAAGC+GGG | - | Chr3:103200720-103200739 | None:intergenic | 10.0% |
| !! | AATTAATTAAACATTAACAG+GGG | - | Chr3:103200318-103200337 | None:intergenic | 15.0% |
| !! | CAAATTAATTAAACATTAAC+AGG | - | Chr3:103200320-103200339 | None:intergenic | 15.0% |
| !! | CTGTTAATGTTTAATTAATT+TGG | + | Chr3:103200318-103200337 | MsG0380018004.01.T01:intron | 15.0% |
| !!! | AATGATATTTTGATAATTGT+GGG | - | Chr3:103200818-103200837 | None:intergenic | 15.0% |
| !!! | AGTATATGATTTTTTTTTGA+AGG | + | Chr3:103200241-103200260 | MsG0380018004.01.T01:intron | 15.0% |
| !!! | TAATGATATTTTGATAATTG+TGG | - | Chr3:103200819-103200838 | None:intergenic | 15.0% |
| !! | AAAAAAATTGTTGCAACAAT+TGG | + | Chr3:103199925-103199944 | MsG0380018004.01.T01:intron | 20.0% |
| !! | AAAATGAACTTATAAATGCA+TGG | + | Chr3:103200542-103200561 | MsG0380018004.01.T01:CDS | 20.0% |
| !! | AAATAAGCACAAAATAACTT+CGG | - | Chr3:103199810-103199829 | None:intergenic | 20.0% |
| !! | AAATGAACTTATAAATGCAT+GGG | + | Chr3:103200543-103200562 | MsG0380018004.01.T01:CDS | 20.0% |
| !! | AAATTATCTGCAAATATGAT+TGG | - | Chr3:103200091-103200110 | None:intergenic | 20.0% |
| !! | ACTCACTTTGTAAATAATTA+AGG | - | Chr3:103200884-103200903 | None:intergenic | 20.0% |
| !!! | TAATGGATGAATTATTCATT+AGG | + | Chr3:103201251-103201270 | MsG0380018004.01.T01:CDS | 20.0% |
| !!! | TACATACATATTTTTTTTCG+TGG | - | Chr3:103200195-103200214 | None:intergenic | 20.0% |
| !!! | TTTTCGTGGTATAAATTTTT+TGG | - | Chr3:103200181-103200200 | None:intergenic | 20.0% |
| ! | ATGCAAATTCTACAAAACAA+TGG | - | Chr3:103199104-103199123 | None:intergenic | 25.0% |
| ! | ATTAATCATTACCTGAAATG+TGG | - | Chr3:103199037-103199056 | None:intergenic | 25.0% |
| ! | GTAGTCTCTTATAAAAATCA+GGG | - | Chr3:103199541-103199560 | None:intergenic | 25.0% |
| ! | TACTTGAAGATAGTATAATG+AGG | + | Chr3:103199315-103199334 | MsG0380018004.01.T01:CDS | 25.0% |
| ! | TATTTGGTATATGCAGAAAT+TGG | + | Chr3:103200974-103200993 | MsG0380018004.01.T01:intron | 25.0% |
| ! | TGATGTCAATATATATATCC+TGG | + | Chr3:103200858-103200877 | MsG0380018004.01.T01:intron | 25.0% |
| ! | TGTAGTCTCTTATAAAAATC+AGG | - | Chr3:103199542-103199561 | None:intergenic | 25.0% |
| ! | TTGCAAAGTAATAATATGGT+AGG | + | Chr3:103200287-103200306 | MsG0380018004.01.T01:intron | 25.0% |
| !! | AAAAATAAGATTGGTTGTGT+TGG | - | Chr3:103200059-103200078 | None:intergenic | 25.0% |
| !! | AAAAGTTGACTAGTTGATAT+TGG | - | Chr3:103199077-103199096 | None:intergenic | 25.0% |
| !! | ATTTTCATATCATTTAAGCC+CGG | + | Chr3:103199723-103199742 | MsG0380018004.01.T01:intron | 25.0% |
| !! | TTTTCCAAATTGTTTGAAAG+TGG | + | Chr3:103199352-103199371 | MsG0380018004.01.T01:CDS | 25.0% |
| !! | TTTTTATATTTGTGACCAAC+CGG | - | Chr3:103199745-103199764 | None:intergenic | 25.0% |
| !!! | ACACAACCAATCTTATTTTT+TGG | + | Chr3:103200059-103200078 | MsG0380018004.01.T01:intron | 25.0% |
| !!! | ATACACAGTTTTGTTTTGAT+AGG | - | Chr3:103200941-103200960 | None:intergenic | 25.0% |
| !!! | TATCAAAAGCTTTTGGTAAT+TGG | - | Chr3:103199133-103199152 | None:intergenic | 25.0% |
| !!! | TATCAACTAGTCAACTTTTT+TGG | + | Chr3:103199078-103199097 | MsG0380018004.01.T01:intron | 25.0% |
| AAAAAGTGAATGGAATTGTC+GGG | - | Chr3:103199637-103199656 | None:intergenic | 30.0% | |
| AAGGGAATATTTACCTAACA+AGG | + | Chr3:103200386-103200405 | MsG0380018004.01.T01:CDS | 30.0% | |
| AAGGTTAGAGACAATTAGAA+CGG | + | Chr3:103201097-103201116 | MsG0380018004.01.T01:intron | 30.0% | |
| ACTTTATGGAGTTGAGAAAT+TGG | + | Chr3:103201294-103201313 | MsG0380018004.01.T01:CDS | 30.0% | |
| AGAAAAGTGATTGAAGAAGA+AGG | + | Chr3:103201059-103201078 | MsG0380018004.01.T01:intron | 30.0% | |
| AGAGTTTGGAGAAGAAATAA+TGG | + | Chr3:103201234-103201253 | MsG0380018004.01.T01:CDS | 30.0% | |
| AGGGAATATTTACCTAACAA+GGG | + | Chr3:103200387-103200406 | MsG0380018004.01.T01:CDS | 30.0% | |
| CATTCTCTGCATACATATAT+GGG | - | Chr3:103199273-103199292 | None:intergenic | 30.0% | |
| CTTTGTAAATAATTAAGGCC+AGG | - | Chr3:103200879-103200898 | None:intergenic | 30.0% | |
| GAAAAAGTGAATGGAATTGT+CGG | - | Chr3:103199638-103199657 | None:intergenic | 30.0% | |
| GAAAAGTGATTGAAGAAGAA+GGG | + | Chr3:103201060-103201079 | MsG0380018004.01.T01:intron | 30.0% | |
| GTAAATATTCCCTTGTTCAA+TGG | - | Chr3:103200380-103200399 | None:intergenic | 30.0% | |
| GTATTGAAGTCATTTCCAAT+AGG | - | Chr3:103199503-103199522 | None:intergenic | 30.0% | |
| TCGCTTGCAAAGTAATAATA+TGG | + | Chr3:103200283-103200302 | MsG0380018004.01.T01:intron | 30.0% | |
| TCTGGACCAAAAAATAAGAT+TGG | - | Chr3:103200068-103200087 | None:intergenic | 30.0% | |
| TGAGGAAAAAACTGAAACAT+GGG | - | Chr3:103199476-103199495 | None:intergenic | 30.0% | |
| TTGAGGAAAAAACTGAAACA+TGG | - | Chr3:103199477-103199496 | None:intergenic | 30.0% | |
| TTTAGTCCATGTTTCTTTAG+TGG | + | Chr3:103199580-103199599 | MsG0380018004.01.T01:intron | 30.0% | |
| TTTGACATCTCTAACACTTA+AGG | - | Chr3:103199232-103199251 | None:intergenic | 30.0% | |
| ! | TGGACAATATCAAAAGCTTT+TGG | - | Chr3:103199140-103199159 | None:intergenic | 30.0% |
| ! | TTTTATATTTGTGACCAACC+GGG | - | Chr3:103199744-103199763 | None:intergenic | 30.0% |
| !!! | TCAATTTTGAAGTCAGAGTT+TGG | + | Chr3:103201220-103201239 | MsG0380018004.01.T01:CDS | 30.0% |
| !!! | TTTTTTCCTCAATGACCTAT+TGG | + | Chr3:103199485-103199504 | MsG0380018004.01.T01:intron | 30.0% |
| AAAAGTGAATGGAATTGTCG+GGG | - | Chr3:103199636-103199655 | None:intergenic | 35.0% | |
| AGGAGGAATGAAAAAGTGAA+TGG | - | Chr3:103199647-103199666 | None:intergenic | 35.0% | |
| ATCAGGGAGTAACTTAAAAG+TGG | - | Chr3:103199525-103199544 | None:intergenic | 35.0% | |
| ATTGGTGGAGCAATCAAAAT+TGG | + | Chr3:103200992-103201011 | MsG0380018004.01.T01:intron | 35.0% | |
| CCATATATGTATGCAGAGAA+TGG | + | Chr3:103199271-103199290 | MsG0380018004.01.T01:intron | 35.0% | |
| CCATTCTCTGCATACATATA+TGG | - | Chr3:103199274-103199293 | None:intergenic | 35.0% | |
| TAAGAGACTACAAGAAGAGA+AGG | + | Chr3:103199550-103199569 | MsG0380018004.01.T01:intron | 35.0% | |
| TAGAGACAATTAGAACGGAT+TGG | + | Chr3:103201102-103201121 | MsG0380018004.01.T01:intron | 35.0% | |
| TCATTTCCAATAGGTCATTG+AGG | - | Chr3:103199494-103199513 | None:intergenic | 35.0% | |
| TCCAAGGTAGTATACTAATC+TGG | + | Chr3:103199687-103199706 | MsG0380018004.01.T01:intron | 35.0% | |
| TCCAGATTAGTATACTACCT+TGG | - | Chr3:103199691-103199710 | None:intergenic | 35.0% | |
| TGCAAATAACTCCACATTTC+AGG | + | Chr3:103199023-103199042 | MsG0380018004.01.T01:CDS | 35.0% | |
| TTATGGAGTTGAGAAATTGG+AGG | + | Chr3:103201297-103201316 | MsG0380018004.01.T01:CDS | 35.0% | |
| TTGGTATATGCAGAAATTGG+TGG | + | Chr3:103200977-103200996 | MsG0380018004.01.T01:intron | 35.0% | |
| ! | AAGGGTCTTTTGATGTTCAA+AGG | + | Chr3:103201078-103201097 | MsG0380018004.01.T01:intron | 35.0% |
| ! | AGAGACAATTAGAACGGATT+GGG | + | Chr3:103201103-103201122 | MsG0380018004.01.T01:intron | 35.0% |
| ! | ATAAATGCATGGGTTGTCAT+TGG | + | Chr3:103200553-103200572 | MsG0380018004.01.T01:CDS | 35.0% |
| ! | ATCTGCAAATATGATTGGTC+TGG | - | Chr3:103200086-103200105 | None:intergenic | 35.0% |
| ! | ATGTTGTTTGATTACCTCTG+CGG | - | Chr3:103200599-103200618 | None:intergenic | 35.0% |
| ! | TCAGCCACTTTCAAACAATT+TGG | - | Chr3:103199359-103199378 | None:intergenic | 35.0% |
| !! | GCTTTAGAACCATTGAACAA+GGG | + | Chr3:103200368-103200387 | MsG0380018004.01.T01:CDS | 35.0% |
| !! | TGCTTTAGAACCATTGAACA+AGG | + | Chr3:103200367-103200386 | MsG0380018004.01.T01:CDS | 35.0% |
| AAGCCAATGTAGACTATAGG+AGG | - | Chr3:103199667-103199686 | None:intergenic | 40.0% | |
| CATCTCTGCCAATAAGTGTT+AGG | - | Chr3:103200519-103200538 | None:intergenic | 40.0% | |
| GCAATGGTCCTAACACTTAT+TGG | + | Chr3:103200508-103200527 | MsG0380018004.01.T01:CDS | 40.0% | |
| GGAAAGCCAATGTAGACTAT+AGG | - | Chr3:103199670-103199689 | None:intergenic | 40.0% | |
| GGTGTTCCACTAAAGAAACA+TGG | - | Chr3:103199589-103199608 | None:intergenic | 40.0% | |
| GTTTCTTTAGTGGAACACCT+GGG | + | Chr3:103199590-103199609 | MsG0380018004.01.T01:intron | 40.0% | |
| TCATATCATTTAAGCCCGGT+TGG | + | Chr3:103199727-103199746 | MsG0380018004.01.T01:intron | 40.0% | |
| TGTTTCTTTAGTGGAACACC+TGG | + | Chr3:103199589-103199608 | MsG0380018004.01.T01:intron | 40.0% | |
| TTCTAATCTCCTCAGACGTA+GGG | - | Chr3:103201043-103201062 | None:intergenic | 40.0% | |
| TTTCTAATCTCCTCAGACGT+AGG | - | Chr3:103201044-103201063 | None:intergenic | 40.0% | |
| ! | AAAGCATCTTGCAACACATC+TGG | - | Chr3:103200353-103200372 | None:intergenic | 40.0% |
| ! | ATCAGGTCCAAATGCACTTT+TGG | + | Chr3:103199391-103199410 | MsG0380018004.01.T01:CDS | 40.0% |
| ! | GAACACCTGGGTCTTTTTAT+GGG | + | Chr3:103199602-103199621 | MsG0380018004.01.T01:intron | 40.0% |
| ! | GACTAGTTGATATTGGAGCA+AGG | - | Chr3:103199070-103199089 | None:intergenic | 40.0% |
| ! | GATGCAACCAAAAGTGCATT+TGG | - | Chr3:103199401-103199420 | None:intergenic | 40.0% |
| ! | TGTTTGAAAGTGGCTGACTT+AGG | + | Chr3:103199362-103199381 | MsG0380018004.01.T01:CDS | 40.0% |
| !! | AAATATGCTTTTTGCACCGC+TGG | - | Chr3:103200421-103200440 | None:intergenic | 40.0% |
| !! | TAGTCTACATTGGCTTTCCA+AGG | + | Chr3:103199671-103199690 | MsG0380018004.01.T01:intron | 40.0% |
| ACTGAAACATGGGTGACTCA+TGG | - | Chr3:103199466-103199485 | None:intergenic | 45.0% | |
| AGTCTCCCATAAAAAGACCC+AGG | - | Chr3:103199610-103199629 | None:intergenic | 45.0% | |
| CCAATGTAGACTATAGGAGG+AGG | - | Chr3:103199664-103199683 | None:intergenic | 45.0% | |
| CCTCCTCCTATAGTCTACAT+TGG | + | Chr3:103199661-103199680 | MsG0380018004.01.T01:intron | 45.0% | |
| GATGAAGACACAAGAGCTGA+GGG | + | Chr3:103201166-103201185 | MsG0380018004.01.T01:CDS | 45.0% | |
| TGATGAAGACACAAGAGCTG+AGG | + | Chr3:103201165-103201184 | MsG0380018004.01.T01:CDS | 45.0% | |
| ! | GCTGACTTAGGTTGTTCATC+AGG | + | Chr3:103199374-103199393 | MsG0380018004.01.T01:CDS | 45.0% |
| ! | GGAACACCTGGGTCTTTTTA+TGG | + | Chr3:103199601-103199620 | MsG0380018004.01.T01:intron | 45.0% |
| !!! | AATTAATTTTTTTTTTTGAA+AGG | - | Chr3:103200670-103200689 | None:intergenic | 5.0% |
| !!! | CTTTTATTTTTAAAAAAATT+AGG | - | Chr3:103199984-103200003 | None:intergenic | 5.0% |
| !!! | TAACTTTTTTATAATATAAA+TGG | - | Chr3:103199160-103199179 | None:intergenic | 5.0% |
| !!! | TTTTTTAAAATTTATATAAG+CGG | - | Chr3:103200721-103200740 | None:intergenic | 5.0% |
| ATCCTATTGCCCTACGTCTG+AGG | + | Chr3:103201031-103201050 | MsG0380018004.01.T01:intron | 50.0% | |
| TCAGACGTAGGGCAATAGGA+TGG | - | Chr3:103201032-103201051 | None:intergenic | 50.0% | |
| TGGCATGGCACTCAATGACA+TGG | + | Chr3:103200573-103200592 | MsG0380018004.01.T01:CDS | 50.0% | |
| ! | GCAGAGAATGGTGATGCTGA+CGG | + | Chr3:103199283-103199302 | MsG0380018004.01.T01:intron | 50.0% |
| ! | TGCATGGGTTGTCATTGGCA+TGG | + | Chr3:103200558-103200577 | MsG0380018004.01.T01:CDS | 50.0% |
| !! | ATGCTTTTTGCACCGCTGGA+GGG | - | Chr3:103200417-103200436 | None:intergenic | 50.0% |
| !! | TATGCTTTTTGCACCGCTGG+AGG | - | Chr3:103200418-103200437 | None:intergenic | 50.0% |
| ACTCAATGACATGGCCGCAG+AGG | + | Chr3:103200582-103200601 | MsG0380018004.01.T01:CDS | 55.0% | |
| CGTTCGTCTGAACTGCTTCC+TGG | + | Chr3:103200481-103200500 | MsG0380018004.01.T01:CDS | 55.0% | |
| CTCCTCAGACGTAGGGCAAT+AGG | - | Chr3:103201036-103201055 | None:intergenic | 55.0% | |
| GTTAGGACCATTGCACCACC+AGG | - | Chr3:103200502-103200521 | None:intergenic | 55.0% | |
| TCGTCTGAACTGCTTCCTGG+TGG | + | Chr3:103200484-103200503 | MsG0380018004.01.T01:CDS | 55.0% | |
| ! | ACTGCTTCCTGGTGGTGCAA+TGG | + | Chr3:103200492-103200511 | MsG0380018004.01.T01:CDS | 55.0% |
| AACAAGGGCAAGCCCTCCAG+CGG | + | Chr3:103200402-103200421 | MsG0380018004.01.T01:CDS | 60.0% | |
| CTGGAGGGCTTGCCCTTGTT+AGG | - | Chr3:103200402-103200421 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr3 | gene | 103199000 | 103201357 | 103199000 | ID=MsG0380018004.01;Name=MsG0380018004.01 |
| Chr3 | mRNA | 103199000 | 103201357 | 103199000 | ID=MsG0380018004.01.T01;Parent=MsG0380018004.01;Name=MsG0380018004.01.T01;_AED=0.50;_eAED=0.51;_QI=0|0|0|1|1|1|4|0|239 |
| Chr3 | exon | 103199000 | 103199044 | 103199000 | ID=MsG0380018004.01.T01:exon:18389;Parent=MsG0380018004.01.T01 |
| Chr3 | exon | 103199287 | 103199468 | 103199287 | ID=MsG0380018004.01.T01:exon:18390;Parent=MsG0380018004.01.T01 |
| Chr3 | exon | 103200354 | 103200603 | 103200354 | ID=MsG0380018004.01.T01:exon:18391;Parent=MsG0380018004.01.T01 |
| Chr3 | exon | 103201115 | 103201357 | 103201115 | ID=MsG0380018004.01.T01:exon:18392;Parent=MsG0380018004.01.T01 |
| Chr3 | CDS | 103199000 | 103199044 | 103199000 | ID=MsG0380018004.01.T01:cds;Parent=MsG0380018004.01.T01 |
| Chr3 | CDS | 103199287 | 103199468 | 103199287 | ID=MsG0380018004.01.T01:cds;Parent=MsG0380018004.01.T01 |
| Chr3 | CDS | 103200354 | 103200603 | 103200354 | ID=MsG0380018004.01.T01:cds;Parent=MsG0380018004.01.T01 |
| Chr3 | CDS | 103201115 | 103201357 | 103201115 | ID=MsG0380018004.01.T01:cds;Parent=MsG0380018004.01.T01 |
| Gene Sequence |
| Protein sequence |
