Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480019807.01.T01 | XP_024631145.1 | 89.258 | 391 | 42 | 0 | 1 | 391 | 1 | 391 | 0 | 701 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480019807.01.T01 | Q9FZ70 | 42.268 | 388 | 204 | 9 | 15 | 391 | 3 | 381 | 4.39E-81 | 258 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480019807.01.T01 | G7I5B2 | 89.231 | 390 | 42 | 0 | 2 | 391 | 12 | 401 | 0.0 | 698 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080049016.01 | MsG0480019807.01 | 0.801577 | 8.433227e-49 | 4.041520e-46 |
| MsG0180003350.01 | MsG0480019807.01 | 0.817988 | 2.477977e-52 | 1.831980e-49 |
| MsG0180004773.01 | MsG0480019807.01 | 0.817205 | 3.720900e-52 | 2.692439e-49 |
| MsG0180004865.01 | MsG0480019807.01 | 0.817801 | 2.731668e-52 | 2.009274e-49 |
| MsG0180005806.01 | MsG0480019807.01 | 0.807803 | 4.229056e-50 | 2.377983e-47 |
| MsG0180006209.01 | MsG0480019807.01 | 0.802593 | 5.212856e-49 | 2.563635e-46 |
| MsG0480019807.01 | MsG0480021109.01 | 0.815646 | 8.309523e-52 | 5.762154e-49 |
| MsG0480019807.01 | MsG0480021563.01 | 0.819614 | 1.058998e-52 | 8.188961e-50 |
| MsG0480019807.01 | MsG0480022150.01 | 0.827777 | 1.297224e-54 | 1.264670e-51 |
| MsG0480019807.01 | MsG0480022935.01 | 0.835817 | 1.345300e-56 | 1.663818e-53 |
| MsG0480019807.01 | MsG0580029820.01 | 0.814241 | 1.702697e-51 | 1.136439e-48 |
| MsG0480019807.01 | MsG0780038263.01 | 0.806254 | 8.995511e-50 | 4.859818e-47 |
| MsG0480019807.01 | MsG0880042895.01 | 0.806442 | 8.208799e-50 | 4.456012e-47 |
| MsG0480019807.01 | MsG0880042921.01 | 0.831796 | 1.362655e-55 | 1.494672e-52 |
| MsG0480019807.01 | MsG0880046024.01 | 0.810168 | 1.318325e-50 | 7.890415e-48 |
| MsG0480019807.01 | MsG0880046574.01 | 0.855033 | 8.276421e-62 | 1.885140e-58 |
| MsG0480018098.01 | MsG0480019807.01 | 0.816983 | 4.173163e-52 | 3.001689e-49 |
| MsG0480018100.01 | MsG0480019807.01 | 0.809335 | 1.991345e-50 | 1.165967e-47 |
| MsG0480018101.01 | MsG0480019807.01 | 0.803515 | 3.360767e-49 | 1.692240e-46 |
| MsG0280007600.01 | MsG0480019807.01 | 0.810612 | 1.057197e-50 | 6.402264e-48 |
| MsG0280010461.01 | MsG0480019807.01 | 0.800112 | 1.679219e-48 | 7.754358e-46 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480019807.01.T01 | MTR_1g021820 | 89.231 | 390 | 42 | 0 | 2 | 391 | 12 | 401 | 0.0 | 698 |
| MsG0480019807.01.T01 | MTR_1g021825 | 77.525 | 396 | 80 | 3 | 3 | 391 | 2 | 395 | 0.0 | 613 |
| MsG0480019807.01.T01 | MTR_1g021825 | 77.136 | 398 | 82 | 3 | 1 | 391 | 71 | 466 | 0.0 | 612 |
| MsG0480019807.01.T01 | MTR_1g013580 | 56.188 | 404 | 154 | 9 | 4 | 390 | 3 | 400 | 2.71e-146 | 423 |
| MsG0480019807.01.T01 | MTR_2g047872 | 55.911 | 406 | 159 | 8 | 2 | 391 | 5 | 406 | 5.52e-142 | 412 |
| MsG0480019807.01.T01 | MTR_1g013560 | 53.827 | 405 | 169 | 6 | 2 | 390 | 3 | 405 | 2.83e-141 | 410 |
| MsG0480019807.01.T01 | MTR_4g057725 | 54.768 | 409 | 165 | 7 | 1 | 391 | 3 | 409 | 1.90e-137 | 400 |
| MsG0480019807.01.T01 | MTR_1g014450 | 53.367 | 401 | 165 | 7 | 7 | 390 | 3 | 398 | 3.20e-135 | 395 |
| MsG0480019807.01.T01 | MTR_1g011400 | 56.122 | 392 | 155 | 6 | 14 | 390 | 3 | 392 | 5.03e-135 | 394 |
| MsG0480019807.01.T01 | MTR_2g047848 | 53.418 | 395 | 166 | 6 | 12 | 390 | 1 | 393 | 2.11e-134 | 392 |
| MsG0480019807.01.T01 | MTR_2g047858 | 55.216 | 393 | 159 | 7 | 14 | 391 | 111 | 501 | 2.45e-134 | 396 |
| MsG0480019807.01.T01 | MTR_2g091145 | 51.358 | 405 | 178 | 7 | 2 | 390 | 5 | 406 | 4.12e-131 | 384 |
| MsG0480019807.01.T01 | MTR_1g016340 | 51.456 | 412 | 172 | 10 | 1 | 390 | 5 | 410 | 3.60e-128 | 377 |
| MsG0480019807.01.T01 | MTR_1g016340 | 52.381 | 399 | 164 | 9 | 14 | 390 | 11 | 405 | 2.60e-127 | 375 |
| MsG0480019807.01.T01 | MTR_5g040850 | 52.538 | 394 | 166 | 6 | 12 | 391 | 1 | 387 | 3.77e-127 | 374 |
| MsG0480019807.01.T01 | MTR_1g013840 | 54.476 | 391 | 161 | 6 | 16 | 391 | 54 | 442 | 8.33e-126 | 372 |
| MsG0480019807.01.T01 | MTR_1g013560 | 53.913 | 345 | 148 | 4 | 2 | 337 | 3 | 345 | 1.23e-123 | 362 |
| MsG0480019807.01.T01 | MTR_1g011410 | 56.932 | 339 | 139 | 4 | 7 | 340 | 302 | 638 | 5.40e-119 | 360 |
| MsG0480019807.01.T01 | MTR_1g011410 | 52.795 | 322 | 124 | 3 | 14 | 335 | 3 | 296 | 3.64e-98 | 306 |
| MsG0480019807.01.T01 | MTR_1g016310 | 52.695 | 334 | 149 | 4 | 1 | 326 | 3 | 335 | 6.05e-118 | 347 |
| MsG0480019807.01.T01 | MTR_1g011430 | 51.571 | 382 | 129 | 6 | 12 | 390 | 1 | 329 | 4.84e-117 | 346 |
| MsG0480019807.01.T01 | MTR_1g016310 | 51.462 | 342 | 157 | 4 | 1 | 334 | 3 | 343 | 4.76e-116 | 346 |
| MsG0480019807.01.T01 | MTR_1g013610 | 52.695 | 334 | 130 | 4 | 12 | 337 | 1 | 314 | 3.05e-106 | 319 |
| MsG0480019807.01.T01 | MTR_1g013280 | 49.558 | 339 | 134 | 6 | 61 | 390 | 1 | 311 | 2.26e-98 | 297 |
| MsG0480019807.01.T01 | MTR_1g028860 | 53.211 | 218 | 92 | 3 | 30 | 239 | 2 | 217 | 4.12e-69 | 220 |
| MsG0480019807.01.T01 | MTR_0049s0110 | 36.788 | 386 | 226 | 7 | 17 | 391 | 7 | 385 | 3.96e-68 | 222 |
| MsG0480019807.01.T01 | MTR_2g047852 | 49.339 | 227 | 83 | 3 | 16 | 238 | 7 | 205 | 4.66e-63 | 202 |
| MsG0480019807.01.T01 | MTR_1g013630 | 56.931 | 202 | 77 | 3 | 14 | 207 | 35 | 234 | 9.21e-63 | 207 |
| MsG0480019807.01.T01 | MTR_0049s0110 | 37.771 | 323 | 192 | 6 | 17 | 337 | 7 | 322 | 3.19e-59 | 196 |
| MsG0480019807.01.T01 | MTR_0049s0110 | 37.771 | 323 | 192 | 6 | 17 | 337 | 7 | 322 | 5.29e-59 | 196 |
| MsG0480019807.01.T01 | MTR_0049s0110 | 38.697 | 261 | 152 | 5 | 17 | 276 | 7 | 260 | 1.77e-53 | 179 |
| MsG0480019807.01.T01 | MTR_1g013620 | 43.750 | 208 | 80 | 4 | 190 | 390 | 1 | 178 | 4.43e-37 | 135 |
| MsG0480019807.01.T01 | MTR_5g038430 | 28.941 | 387 | 243 | 9 | 18 | 391 | 96 | 463 | 4.03e-33 | 130 |
| MsG0480019807.01.T01 | MTR_7g090750 | 28.297 | 417 | 267 | 12 | 12 | 409 | 3 | 406 | 1.20e-26 | 111 |
| MsG0480019807.01.T01 | MTR_0227s0010 | 31.734 | 271 | 141 | 7 | 18 | 281 | 15 | 248 | 9.97e-26 | 107 |
| MsG0480019807.01.T01 | MTR_1g010190 | 60.870 | 69 | 27 | 0 | 283 | 351 | 12 | 80 | 5.32e-22 | 90.1 |
| MsG0480019807.01.T01 | MTR_8g095590 | 26.613 | 372 | 207 | 14 | 18 | 371 | 15 | 338 | 1.79e-20 | 93.6 |
| MsG0480019807.01.T01 | MTR_6g013240 | 29.075 | 227 | 132 | 6 | 21 | 223 | 75 | 296 | 5.60e-17 | 83.6 |
| MsG0480019807.01.T01 | MTR_6g013380 | 29.075 | 227 | 132 | 6 | 21 | 223 | 70 | 291 | 5.71e-17 | 83.6 |
| MsG0480019807.01.T01 | MTR_7g056447 | 33.462 | 260 | 138 | 10 | 13 | 269 | 4 | 231 | 6.24e-17 | 81.3 |
| MsG0480019807.01.T01 | MTR_1g115245 | 31.739 | 230 | 132 | 9 | 2 | 224 | 16 | 227 | 3.12e-16 | 79.3 |
| MsG0480019807.01.T01 | MTR_2g100590 | 29.289 | 239 | 148 | 6 | 15 | 243 | 39 | 266 | 1.11e-15 | 79.0 |
| MsG0480019807.01.T01 | MTR_2g100590 | 29.289 | 239 | 148 | 6 | 15 | 243 | 39 | 266 | 1.37e-15 | 78.6 |
| MsG0480019807.01.T01 | MTR_8g015830 | 31.797 | 217 | 114 | 7 | 14 | 202 | 4 | 214 | 1.64e-15 | 78.6 |
| MsG0480019807.01.T01 | MTR_8g015830 | 31.797 | 217 | 114 | 7 | 14 | 202 | 4 | 214 | 1.94e-15 | 78.6 |
| MsG0480019807.01.T01 | MTR_2g100590 | 29.289 | 239 | 148 | 6 | 15 | 243 | 39 | 266 | 2.32e-15 | 78.6 |
| MsG0480019807.01.T01 | MTR_3g036250 | 25.693 | 397 | 227 | 14 | 15 | 397 | 2 | 344 | 2.62e-15 | 77.4 |
| MsG0480019807.01.T01 | MTR_7g095350 | 29.412 | 221 | 136 | 5 | 23 | 223 | 13 | 233 | 2.99e-15 | 77.8 |
| MsG0480019807.01.T01 | MTR_7g095350 | 29.412 | 221 | 136 | 5 | 23 | 223 | 13 | 233 | 3.06e-15 | 77.4 |
| MsG0480019807.01.T01 | MTR_7g095350 | 29.412 | 221 | 136 | 5 | 23 | 223 | 21 | 241 | 3.22e-15 | 77.4 |
| MsG0480019807.01.T01 | MTR_7g095350 | 29.412 | 221 | 136 | 5 | 23 | 223 | 13 | 233 | 4.58e-15 | 77.4 |
| MsG0480019807.01.T01 | MTR_7g095350 | 29.412 | 221 | 136 | 5 | 23 | 223 | 21 | 241 | 5.69e-15 | 77.0 |
| MsG0480019807.01.T01 | MTR_1g115250 | 38.514 | 148 | 79 | 6 | 13 | 155 | 27 | 167 | 1.37e-14 | 75.5 |
| MsG0480019807.01.T01 | MTR_7g105510 | 29.204 | 226 | 135 | 6 | 21 | 223 | 35 | 258 | 4.20e-14 | 73.6 |
| MsG0480019807.01.T01 | MTR_2g082850 | 31.492 | 181 | 113 | 4 | 12 | 185 | 16 | 192 | 6.76e-14 | 73.2 |
| MsG0480019807.01.T01 | MTR_8g015680 | 30.233 | 215 | 117 | 6 | 12 | 202 | 1 | 206 | 1.49e-13 | 72.8 |
| MsG0480019807.01.T01 | MTR_8g017280 | 29.143 | 175 | 117 | 3 | 11 | 182 | 29 | 199 | 1.87e-13 | 70.9 |
| MsG0480019807.01.T01 | MTR_7g056433 | 33.014 | 209 | 113 | 7 | 7 | 202 | 2 | 196 | 1.92e-13 | 71.6 |
| MsG0480019807.01.T01 | MTR_7g098510 | 24.242 | 396 | 222 | 11 | 18 | 391 | 18 | 357 | 1.97e-13 | 71.6 |
| MsG0480019807.01.T01 | MTR_8g017280 | 29.143 | 175 | 117 | 3 | 11 | 182 | 29 | 199 | 2.03e-13 | 72.0 |
| MsG0480019807.01.T01 | MTR_2g100570 | 30.531 | 226 | 135 | 6 | 13 | 223 | 67 | 285 | 2.43e-13 | 72.0 |
| MsG0480019807.01.T01 | MTR_4g056030 | 27.790 | 457 | 247 | 21 | 13 | 412 | 4 | 434 | 4.25e-13 | 71.2 |
| MsG0480019807.01.T01 | MTR_2g100570 | 29.915 | 234 | 142 | 6 | 5 | 223 | 59 | 285 | 5.20e-13 | 70.9 |
| MsG0480019807.01.T01 | MTR_2g100570 | 30.531 | 226 | 135 | 6 | 13 | 223 | 67 | 285 | 6.37e-13 | 70.9 |
| MsG0480019807.01.T01 | MTR_8g467800 | 26.327 | 452 | 273 | 19 | 2 | 408 | 4 | 440 | 6.55e-13 | 70.5 |
| MsG0480019807.01.T01 | MTR_4g080787 | 24.444 | 450 | 259 | 17 | 18 | 408 | 19 | 446 | 1.80e-12 | 69.3 |
| MsG0480019807.01.T01 | MTR_4g045900 | 23.810 | 462 | 254 | 18 | 18 | 390 | 26 | 478 | 2.75e-12 | 68.6 |
| MsG0480019807.01.T01 | MTR_7g115270 | 32.143 | 196 | 113 | 7 | 18 | 200 | 12 | 200 | 4.02e-12 | 67.8 |
| MsG0480019807.01.T01 | MTR_7g025080 | 46.053 | 76 | 40 | 1 | 14 | 88 | 2 | 77 | 4.63e-12 | 67.4 |
| MsG0480019807.01.T01 | MTR_8g014160 | 23.000 | 400 | 244 | 11 | 12 | 390 | 35 | 391 | 5.81e-12 | 67.4 |
| MsG0480019807.01.T01 | MTR_2g082800 | 32.948 | 173 | 107 | 7 | 13 | 183 | 22 | 187 | 9.25e-12 | 66.6 |
| MsG0480019807.01.T01 | MTR_7g098570 | 24.121 | 398 | 245 | 13 | 2 | 390 | 9 | 358 | 9.98e-12 | 67.0 |
| MsG0480019807.01.T01 | MTR_8g014260 | 29.225 | 284 | 143 | 13 | 15 | 249 | 13 | 287 | 1.09e-11 | 66.6 |
| MsG0480019807.01.T01 | MTR_8g015770 | 28.509 | 228 | 118 | 8 | 14 | 202 | 2 | 223 | 1.09e-11 | 67.0 |
| MsG0480019807.01.T01 | MTR_8g468470 | 24.771 | 436 | 245 | 14 | 18 | 390 | 14 | 429 | 1.33e-11 | 66.6 |
| MsG0480019807.01.T01 | MTR_5g087940 | 35.461 | 141 | 80 | 3 | 15 | 155 | 23 | 152 | 2.61e-11 | 65.5 |
| MsG0480019807.01.T01 | MTR_5g039950 | 24.096 | 415 | 266 | 12 | 13 | 404 | 18 | 406 | 2.64e-11 | 65.5 |
| MsG0480019807.01.T01 | MTR_8g467800 | 39.604 | 101 | 55 | 3 | 2 | 101 | 4 | 99 | 2.78e-11 | 65.1 |
| MsG0480019807.01.T01 | MTR_5g021550 | 32.192 | 146 | 89 | 4 | 14 | 150 | 15 | 159 | 3.08e-11 | 62.0 |
| MsG0480019807.01.T01 | MTR_7g095560 | 28.194 | 227 | 133 | 7 | 23 | 223 | 16 | 238 | 3.28e-11 | 65.5 |
| MsG0480019807.01.T01 | MTR_7g032380 | 27.636 | 275 | 164 | 11 | 18 | 279 | 11 | 263 | 4.12e-11 | 64.3 |
| MsG0480019807.01.T01 | MTR_7g023330 | 25.320 | 391 | 242 | 15 | 15 | 394 | 17 | 368 | 6.15e-11 | 64.3 |
| MsG0480019807.01.T01 | MTR_4g080773 | 25.111 | 450 | 261 | 18 | 18 | 412 | 19 | 447 | 9.66e-11 | 63.9 |
| MsG0480019807.01.T01 | MTR_7g087040 | 29.911 | 224 | 132 | 6 | 23 | 223 | 11 | 232 | 9.97e-11 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480019807.01.T01 | AT1G13570 | 42.268 | 388 | 204 | 9 | 15 | 391 | 3 | 381 | 4.48e-82 | 258 |
| MsG0480019807.01.T01 | AT1G13570 | 42.268 | 388 | 204 | 9 | 15 | 391 | 3 | 381 | 4.48e-82 | 258 |
| MsG0480019807.01.T01 | AT1G13570 | 43.682 | 277 | 145 | 6 | 15 | 288 | 3 | 271 | 5.17e-62 | 202 |
| MsG0480019807.01.T01 | AT1G66310 | 29.858 | 422 | 230 | 21 | 13 | 391 | 14 | 412 | 8.52e-20 | 91.3 |
| MsG0480019807.01.T01 | AT5G56440 | 31.905 | 210 | 130 | 6 | 18 | 221 | 2 | 204 | 1.04e-18 | 88.2 |
| MsG0480019807.01.T01 | AT4G10400 | 27.485 | 342 | 211 | 10 | 18 | 342 | 2 | 323 | 2.16e-17 | 84.0 |
| MsG0480019807.01.T01 | AT4G10400 | 27.485 | 342 | 211 | 10 | 18 | 342 | 2 | 323 | 2.16e-17 | 84.0 |
| MsG0480019807.01.T01 | AT4G10400 | 27.485 | 342 | 211 | 10 | 18 | 342 | 2 | 323 | 2.16e-17 | 84.0 |
| MsG0480019807.01.T01 | AT3G52680 | 26.686 | 341 | 218 | 10 | 18 | 340 | 21 | 347 | 4.77e-17 | 83.2 |
| MsG0480019807.01.T01 | AT5G22720 | 29.104 | 268 | 169 | 9 | 1 | 255 | 6 | 265 | 7.73e-17 | 82.8 |
| MsG0480019807.01.T01 | AT3G58860 | 29.323 | 266 | 152 | 9 | 12 | 245 | 1 | 262 | 2.29e-16 | 81.3 |
| MsG0480019807.01.T01 | AT3G52680 | 30.986 | 213 | 133 | 5 | 18 | 223 | 21 | 226 | 2.52e-16 | 80.5 |
| MsG0480019807.01.T01 | AT5G53840 | 27.119 | 413 | 241 | 16 | 16 | 391 | 16 | 405 | 4.44e-16 | 80.1 |
| MsG0480019807.01.T01 | AT3G59200 | 31.387 | 274 | 152 | 12 | 18 | 270 | 7 | 265 | 4.86e-16 | 80.5 |
| MsG0480019807.01.T01 | AT3G59200 | 31.387 | 274 | 152 | 12 | 18 | 270 | 7 | 265 | 4.99e-16 | 79.3 |
| MsG0480019807.01.T01 | AT3G26922 | 29.801 | 302 | 182 | 12 | 18 | 303 | 14 | 301 | 7.19e-16 | 78.2 |
| MsG0480019807.01.T01 | AT3G26922 | 29.801 | 302 | 182 | 12 | 18 | 303 | 14 | 301 | 7.19e-16 | 78.2 |
| MsG0480019807.01.T01 | AT3G58960 | 30.000 | 230 | 137 | 7 | 18 | 235 | 2 | 219 | 1.01e-15 | 79.3 |
| MsG0480019807.01.T01 | AT4G00160 | 31.414 | 191 | 120 | 5 | 18 | 203 | 16 | 200 | 1.12e-15 | 79.0 |
| MsG0480019807.01.T01 | AT1G32375 | 23.134 | 402 | 267 | 13 | 18 | 391 | 2 | 389 | 1.44e-15 | 78.6 |
| MsG0480019807.01.T01 | AT1G32375 | 23.134 | 402 | 267 | 13 | 18 | 391 | 2 | 389 | 1.44e-15 | 78.6 |
| MsG0480019807.01.T01 | AT5G22730 | 25.571 | 438 | 261 | 15 | 2 | 391 | 13 | 433 | 2.28e-15 | 78.2 |
| MsG0480019807.01.T01 | AT5G22730 | 25.571 | 438 | 261 | 15 | 2 | 391 | 13 | 433 | 2.28e-15 | 78.2 |
| MsG0480019807.01.T01 | AT4G14103 | 30.657 | 274 | 170 | 11 | 18 | 279 | 8 | 273 | 4.14e-15 | 77.0 |
| MsG0480019807.01.T01 | AT4G14103 | 30.657 | 274 | 170 | 11 | 18 | 279 | 8 | 273 | 4.14e-15 | 77.0 |
| MsG0480019807.01.T01 | AT1G66300 | 27.356 | 435 | 252 | 19 | 3 | 391 | 10 | 426 | 4.85e-15 | 77.0 |
| MsG0480019807.01.T01 | AT5G22730 | 31.128 | 257 | 150 | 10 | 2 | 244 | 13 | 256 | 5.52e-15 | 76.6 |
| MsG0480019807.01.T01 | AT4G14103 | 30.657 | 274 | 170 | 11 | 18 | 279 | 8 | 273 | 5.55e-15 | 77.0 |
| MsG0480019807.01.T01 | AT5G56420 | 31.019 | 216 | 128 | 7 | 18 | 223 | 6 | 210 | 1.08e-14 | 75.9 |
| MsG0480019807.01.T01 | AT5G56420 | 31.019 | 216 | 128 | 7 | 18 | 223 | 6 | 210 | 1.08e-14 | 75.9 |
| MsG0480019807.01.T01 | AT5G56420 | 31.019 | 216 | 128 | 7 | 18 | 223 | 6 | 210 | 1.08e-14 | 75.9 |
| MsG0480019807.01.T01 | AT3G58980 | 30.515 | 272 | 133 | 11 | 18 | 246 | 2 | 260 | 1.50e-14 | 75.9 |
| MsG0480019807.01.T01 | AT4G09920 | 30.189 | 212 | 136 | 5 | 18 | 223 | 2 | 207 | 1.79e-14 | 73.9 |
| MsG0480019807.01.T01 | AT4G09920 | 30.189 | 212 | 136 | 5 | 18 | 223 | 2 | 207 | 1.79e-14 | 73.9 |
| MsG0480019807.01.T01 | AT4G09920 | 30.189 | 212 | 136 | 5 | 18 | 223 | 2 | 207 | 1.79e-14 | 73.9 |
| MsG0480019807.01.T01 | AT4G15060 | 25.854 | 410 | 240 | 17 | 1 | 371 | 9 | 393 | 2.38e-14 | 74.7 |
| MsG0480019807.01.T01 | AT4G09920 | 30.189 | 212 | 136 | 5 | 18 | 223 | 2 | 207 | 2.41e-14 | 73.9 |
| MsG0480019807.01.T01 | AT4G09920 | 30.189 | 212 | 136 | 5 | 18 | 223 | 2 | 207 | 2.41e-14 | 73.9 |
| MsG0480019807.01.T01 | AT4G14096 | 25.355 | 422 | 251 | 18 | 18 | 390 | 8 | 414 | 2.43e-14 | 75.1 |
| MsG0480019807.01.T01 | AT4G14096 | 25.355 | 422 | 251 | 18 | 18 | 390 | 8 | 414 | 2.43e-14 | 75.1 |
| MsG0480019807.01.T01 | AT1G78760 | 24.460 | 417 | 252 | 18 | 16 | 390 | 14 | 409 | 2.56e-14 | 74.7 |
| MsG0480019807.01.T01 | AT5G56370 | 29.607 | 331 | 203 | 15 | 18 | 335 | 2 | 315 | 2.67e-14 | 73.9 |
| MsG0480019807.01.T01 | AT3G59000 | 26.897 | 435 | 242 | 16 | 18 | 390 | 2 | 422 | 3.63e-14 | 74.7 |
| MsG0480019807.01.T01 | AT5G56370 | 28.500 | 400 | 238 | 18 | 18 | 391 | 2 | 379 | 4.65e-14 | 73.9 |
| MsG0480019807.01.T01 | AT5G56370 | 28.500 | 400 | 238 | 18 | 18 | 391 | 2 | 379 | 4.65e-14 | 73.9 |
| MsG0480019807.01.T01 | AT3G59230 | 33.000 | 200 | 119 | 6 | 18 | 204 | 12 | 209 | 6.00e-14 | 73.9 |
| MsG0480019807.01.T01 | AT4G15060 | 26.854 | 391 | 225 | 17 | 2 | 371 | 156 | 506 | 6.48e-14 | 73.9 |
| MsG0480019807.01.T01 | AT4G13960 | 33.796 | 216 | 128 | 8 | 18 | 224 | 2 | 211 | 8.71e-14 | 73.2 |
| MsG0480019807.01.T01 | AT4G13960 | 33.796 | 216 | 128 | 8 | 18 | 224 | 2 | 211 | 8.71e-14 | 73.2 |
| MsG0480019807.01.T01 | AT3G59190 | 27.826 | 230 | 153 | 7 | 18 | 236 | 12 | 239 | 1.19e-13 | 72.4 |
| MsG0480019807.01.T01 | AT5G41840 | 28.175 | 252 | 149 | 7 | 6 | 227 | 2 | 251 | 1.50e-13 | 72.8 |
| MsG0480019807.01.T01 | AT3G59190 | 28.139 | 231 | 151 | 8 | 18 | 236 | 12 | 239 | 2.35e-13 | 72.0 |
| MsG0480019807.01.T01 | AT3G59000 | 40.678 | 118 | 65 | 3 | 18 | 130 | 2 | 119 | 2.67e-13 | 71.2 |
| MsG0480019807.01.T01 | AT3G58880 | 31.163 | 215 | 136 | 8 | 18 | 223 | 3 | 214 | 2.82e-13 | 71.6 |
| MsG0480019807.01.T01 | AT5G22610 | 27.193 | 228 | 136 | 7 | 18 | 226 | 18 | 234 | 3.41e-13 | 71.6 |
| MsG0480019807.01.T01 | AT4G00315 | 29.358 | 218 | 134 | 6 | 18 | 223 | 2 | 211 | 4.70e-13 | 70.9 |
| MsG0480019807.01.T01 | AT1G58310 | 27.083 | 384 | 195 | 17 | 18 | 333 | 8 | 374 | 6.38e-13 | 70.9 |
| MsG0480019807.01.T01 | AT3G28410 | 27.727 | 220 | 137 | 8 | 15 | 228 | 25 | 228 | 6.62e-13 | 70.5 |
| MsG0480019807.01.T01 | AT2G04230 | 30.088 | 226 | 149 | 7 | 18 | 236 | 13 | 236 | 7.18e-13 | 70.5 |
| MsG0480019807.01.T01 | AT3G49150 | 31.532 | 222 | 121 | 9 | 18 | 221 | 16 | 224 | 9.78e-13 | 70.1 |
| MsG0480019807.01.T01 | AT3G59240 | 27.619 | 315 | 182 | 14 | 18 | 293 | 8 | 315 | 1.03e-12 | 70.1 |
| MsG0480019807.01.T01 | AT5G44950 | 26.766 | 269 | 156 | 8 | 18 | 254 | 4 | 263 | 1.16e-12 | 69.7 |
| MsG0480019807.01.T01 | AT1G51370 | 25.666 | 413 | 249 | 15 | 12 | 390 | 14 | 402 | 1.82e-12 | 68.9 |
| MsG0480019807.01.T01 | AT3G51530 | 30.736 | 231 | 137 | 10 | 5 | 227 | 19 | 234 | 2.07e-12 | 68.9 |
| MsG0480019807.01.T01 | AT1G51370 | 26.724 | 348 | 216 | 12 | 12 | 339 | 14 | 342 | 2.30e-12 | 68.2 |
| MsG0480019807.01.T01 | AT5G50270 | 24.930 | 357 | 203 | 15 | 18 | 335 | 2 | 332 | 3.80e-12 | 68.2 |
| MsG0480019807.01.T01 | AT1G55030 | 28.448 | 348 | 192 | 17 | 18 | 336 | 19 | 338 | 3.83e-12 | 68.2 |
| MsG0480019807.01.T01 | AT5G02700 | 26.364 | 220 | 140 | 7 | 15 | 228 | 24 | 227 | 4.28e-12 | 68.2 |
| MsG0480019807.01.T01 | AT1G51370 | 27.682 | 289 | 174 | 11 | 12 | 280 | 14 | 287 | 5.11e-12 | 67.8 |
| MsG0480019807.01.T01 | AT4G00320 | 27.679 | 224 | 124 | 7 | 7 | 205 | 3 | 213 | 5.95e-12 | 67.8 |
| MsG0480019807.01.T01 | AT1G55030 | 28.736 | 348 | 191 | 17 | 18 | 336 | 9 | 328 | 5.97e-12 | 67.4 |
| MsG0480019807.01.T01 | AT5G44490 | 23.583 | 441 | 261 | 17 | 5 | 391 | 2 | 420 | 6.02e-12 | 67.8 |
| MsG0480019807.01.T01 | AT5G56570 | 24.096 | 415 | 263 | 17 | 15 | 404 | 33 | 420 | 6.45e-12 | 67.4 |
| MsG0480019807.01.T01 | AT5G56410 | 27.237 | 257 | 144 | 6 | 31 | 244 | 16 | 272 | 7.12e-12 | 67.4 |
| MsG0480019807.01.T01 | AT5G44490 | 23.583 | 441 | 261 | 17 | 5 | 391 | 2 | 420 | 7.25e-12 | 67.4 |
| MsG0480019807.01.T01 | AT5G22610 | 26.818 | 220 | 136 | 7 | 18 | 223 | 18 | 226 | 1.50e-11 | 66.6 |
| MsG0480019807.01.T01 | AT5G02910 | 26.801 | 347 | 206 | 13 | 18 | 335 | 11 | 338 | 2.40e-11 | 65.1 |
| MsG0480019807.01.T01 | AT4G22280 | 29.688 | 192 | 121 | 7 | 18 | 204 | 2 | 184 | 2.43e-11 | 65.5 |
| MsG0480019807.01.T01 | AT5G41830 | 27.602 | 221 | 126 | 7 | 7 | 204 | 3 | 212 | 2.75e-11 | 65.9 |
| MsG0480019807.01.T01 | AT1G69630 | 29.744 | 195 | 121 | 5 | 15 | 202 | 15 | 200 | 2.75e-11 | 65.5 |
| MsG0480019807.01.T01 | AT5G03100 | 25.249 | 301 | 177 | 10 | 18 | 289 | 9 | 290 | 2.82e-11 | 64.7 |
| MsG0480019807.01.T01 | AT5G03100 | 25.249 | 301 | 177 | 10 | 18 | 289 | 9 | 290 | 2.82e-11 | 64.7 |
| MsG0480019807.01.T01 | AT4G13965 | 24.507 | 355 | 196 | 10 | 18 | 336 | 10 | 328 | 3.19e-11 | 65.1 |
| MsG0480019807.01.T01 | AT5G02910 | 26.801 | 347 | 206 | 13 | 18 | 335 | 11 | 338 | 3.55e-11 | 64.7 |
| MsG0480019807.01.T01 | AT4G22280 | 29.167 | 192 | 122 | 6 | 18 | 204 | 2 | 184 | 3.85e-11 | 64.3 |
| MsG0480019807.01.T01 | AT3G26922 | 28.671 | 286 | 174 | 12 | 34 | 303 | 1 | 272 | 4.15e-11 | 63.9 |
| MsG0480019807.01.T01 | AT3G26922 | 28.671 | 286 | 174 | 12 | 34 | 303 | 1 | 272 | 4.15e-11 | 63.9 |
| MsG0480019807.01.T01 | AT5G25850 | 31.016 | 187 | 117 | 6 | 18 | 202 | 20 | 196 | 4.19e-11 | 65.1 |
| MsG0480019807.01.T01 | AT5G54820 | 26.255 | 259 | 158 | 9 | 16 | 245 | 5 | 259 | 5.77e-11 | 64.7 |
| MsG0480019807.01.T01 | AT5G02910 | 26.801 | 347 | 206 | 13 | 18 | 335 | 11 | 338 | 6.52e-11 | 64.3 |
| MsG0480019807.01.T01 | AT5G56560 | 28.326 | 233 | 137 | 12 | 15 | 238 | 2 | 213 | 8.20e-11 | 64.3 |
Find 88 sgRNAs with CRISPR-Local
Find 135 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTCTGGCTGCTTCCTTAAT+TGG | 0.205674 | 4:-27641967 | None:intergenic |
| GTTGACAAACCATGCCTATT+TGG | 0.234739 | 4:+27643351 | MsG0480019807.01.T01:CDS |
| CAATATTCAGAAAACAAATT+AGG | 0.275049 | 4:-27641817 | None:intergenic |
| ATCATTAAAGTTTATGCATA+TGG | 0.276553 | 4:-27642928 | None:intergenic |
| AAGAGTTTGTGTTAGAAATC+TGG | 0.283438 | 4:+27642232 | MsG0480019807.01.T01:CDS |
| CATGTACTTATTCTCCATTC+TGG | 0.283492 | 4:+27642120 | MsG0480019807.01.T01:CDS |
| TTTATTTGTCTATTAAATAA+TGG | 0.297122 | 4:-27641703 | None:intergenic |
| CTCACCTAATCTACGAGAAT+TGG | 0.327148 | 4:+27642989 | MsG0480019807.01.T01:CDS |
| GGTAGATAAAATACTTGTTC+TGG | 0.331898 | 4:-27641983 | None:intergenic |
| TCATTATCAAACACAAGATT+TGG | 0.334429 | 4:-27642033 | None:intergenic |
| TAAAAGGTCATTAGAAGTTT+CGG | 0.342074 | 4:-27642064 | None:intergenic |
| CATGACTGGCCGATCCAAAT+AGG | 0.352972 | 4:-27643365 | None:intergenic |
| GCATGAACGCTCTAGCAATT+TGG | 0.354505 | 4:+27642629 | MsG0480019807.01.T01:CDS |
| ATTTCCAATTCTCGTAGATT+AGG | 0.367571 | 4:-27642993 | None:intergenic |
| ATACCACCATCAACATTTCA+AGG | 0.369396 | 4:+27642342 | MsG0480019807.01.T01:CDS |
| GCTTGCTCTTGATAACTAAA+AGG | 0.372194 | 4:-27642080 | None:intergenic |
| CGTCTGATACGCAAGGAGAC+TGG | 0.376356 | 4:-27641882 | None:intergenic |
| GCATGGTTTGTCAACGGAAC+AGG | 0.398730 | 4:-27643343 | None:intergenic |
| AACGCTATAAAATACCTTCA+TGG | 0.398891 | 4:+27642268 | MsG0480019807.01.T01:CDS |
| GAACATTGATGGAGAATTTG+AGG | 0.403009 | 4:+27642524 | MsG0480019807.01.T01:CDS |
| ATAATACTAATGAGTTGATT+AGG | 0.405951 | 4:-27641598 | None:intergenic |
| CTACCAACTGGAGGTACAAA+TGG | 0.415469 | 4:+27642001 | MsG0480019807.01.T01:CDS |
| TTGAAGCCTTGAAATGTTGA+TGG | 0.419068 | 4:-27642348 | None:intergenic |
| AAAATCATTACTTACGGTCT+AGG | 0.429313 | 4:-27643571 | None:intergenic |
| ACATACTTCACTTGCATGAC+TGG | 0.429422 | 4:-27643379 | None:intergenic |
| AAACTATTGACCAGGGTTGT+AGG | 0.433500 | 4:-27641665 | None:intergenic |
| AGATATCTTCCGTGGTGTCT+CGG | 0.440118 | 4:+27643757 | MsG0480019807.01.T01:three_prime_UTR |
| GTGAGAATAGGTGGCATCTC+TGG | 0.446886 | 4:+27643400 | MsG0480019807.01.T01:CDS |
| ATCTTAATATCTAGCACAAT+CGG | 0.453114 | 4:+27643713 | MsG0480019807.01.T01:three_prime_UTR |
| ATTTAGAATTATTAGAATGC+TGG | 0.466467 | 4:+27642316 | MsG0480019807.01.T01:CDS |
| GTCTGATACGCAAGGAGACT+GGG | 0.470015 | 4:-27641881 | None:intergenic |
| ATGTCAATCGTTCAAGCAAA+AGG | 0.471429 | 4:-27642443 | None:intergenic |
| TCGTTCAAGCAAAAGGCAGC+TGG | 0.482008 | 4:-27642436 | None:intergenic |
| CACGGGGTAGGAAGCTCTAA+TGG | 0.482328 | 4:-27642885 | None:intergenic |
| CATAAACTTTAATGATTCAA+AGG | 0.483498 | 4:+27642935 | MsG0480019807.01.T01:CDS |
| TGGTAAACTACTAACTCTAT+CGG | 0.486556 | 4:-27641911 | None:intergenic |
| TGAAAGAACTATTGCGGATG+AGG | 0.488648 | 4:+27643522 | MsG0480019807.01.T01:CDS |
| AAACTCTTTAACCTGCCATC+TGG | 0.488698 | 4:-27642217 | None:intergenic |
| AGCTCCCTACCACACACGTA+GGG | 0.502117 | 4:-27643631 | None:intergenic |
| TAATCTACGAGAATTGGAAA+TGG | 0.514737 | 4:+27642995 | MsG0480019807.01.T01:CDS |
| CAAGTGAAGTATGTGAGAAT+AGG | 0.521251 | 4:+27643388 | MsG0480019807.01.T01:CDS |
| TTAATTACTACCTACAACCC+TGG | 0.523938 | 4:+27641655 | MsG0480019807.01.T01:five_prime_UTR |
| ATCTCCAGGCTGCGTATATG+AGG | 0.527733 | 4:-27642672 | None:intergenic |
| CGGTAATACCAACATTGTTA+CGG | 0.532434 | 4:+27643733 | MsG0480019807.01.T01:three_prime_UTR |
| GGTAAACTACTAACTCTATC+GGG | 0.539598 | 4:-27641910 | None:intergenic |
| TCCGGTCCGACGTTTAAAGC+AGG | 0.543713 | 4:-27643494 | None:intergenic |
| TTGCATGAAAACTATTGACC+AGG | 0.545360 | 4:-27641673 | None:intergenic |
| TCTACCTCATATACGCAGCC+TGG | 0.550582 | 4:+27642668 | MsG0480019807.01.T01:CDS |
| GTAAATAACTTCAGCTCGTG+AGG | 0.552911 | 4:-27643549 | None:intergenic |
| GGTCCATTTGTACCTCCAGT+TGG | 0.554074 | 4:-27642004 | None:intergenic |
| TCTTTATCTAACCAGATGGC+AGG | 0.558711 | 4:+27642206 | MsG0480019807.01.T01:CDS |
| AATAGTTCTTTCATCAACTC+CGG | 0.570479 | 4:-27643512 | None:intergenic |
| ACCTGCTTTAAACGTCGGAC+CGG | 0.576995 | 4:+27643493 | MsG0480019807.01.T01:CDS |
| TTGACATTGATCAACTTCGA+TGG | 0.578034 | 4:+27642459 | MsG0480019807.01.T01:CDS |
| GTGAAGTATGTGAGAATAGG+TGG | 0.582575 | 4:+27643391 | MsG0480019807.01.T01:CDS |
| CAAACCATGCCTATTTGGAT+CGG | 0.584800 | 4:+27643356 | MsG0480019807.01.T01:CDS |
| TGACAAGAAAATAACCATGA+AGG | 0.587372 | 4:-27642282 | None:intergenic |
| TCTACGAGAATTGGAAATGG+TGG | 0.588559 | 4:+27642998 | MsG0480019807.01.T01:CDS |
| GATATCTACCGTAACAATGT+TGG | 0.589278 | 4:-27643741 | None:intergenic |
| GATAGAGTTAGTAGTTTACC+AGG | 0.591174 | 4:+27641913 | MsG0480019807.01.T01:CDS |
| AAGCTGATGAAGTCTAACTC+AGG | 0.595650 | 4:-27643430 | None:intergenic |
| GAGAACTTCGAAAGCAAACA+AGG | 0.598820 | 4:+27642600 | MsG0480019807.01.T01:CDS |
| CTTAGATCAACGCACGGGGT+AGG | 0.603539 | 4:-27642897 | None:intergenic |
| ATGTGGTTTATTATAAGACC+TGG | 0.606081 | 4:-27641931 | None:intergenic |
| TCTTCAATGAGACGTTGTCG+CGG | 0.607081 | 4:-27641561 | None:intergenic |
| TATAACTTAGATCAACGCAC+GGG | 0.607237 | 4:-27642902 | None:intergenic |
| GCGACAACGTCTCATTGAAG+AGG | 0.613382 | 4:+27641563 | MsG0480019807.01.T01:five_prime_UTR |
| GGCTCCTCGTCTGATACGCA+AGG | 0.617251 | 4:-27641889 | None:intergenic |
| TGCATGAAAACTATTGACCA+GGG | 0.617743 | 4:-27641672 | None:intergenic |
| GTCTCCTTGCGTATCAGACG+AGG | 0.618721 | 4:+27641885 | MsG0480019807.01.T01:CDS |
| CTGAAACCTGCTTTAAACGT+CGG | 0.626977 | 4:+27643488 | MsG0480019807.01.T01:CDS |
| AAACACAAGATTTGGAAGTG+TGG | 0.633110 | 4:-27642025 | None:intergenic |
| AAATAGGCATGGTTTGTCAA+CGG | 0.636771 | 4:-27643349 | None:intergenic |
| CTCCCTACCACACACGTAGG+GGG | 0.641473 | 4:-27643629 | None:intergenic |
| ATACTAATGAGTTGATTAGG+TGG | 0.643196 | 4:-27641595 | None:intergenic |
| CTGGCCGATCCAAATAGGCA+TGG | 0.648014 | 4:-27643360 | None:intergenic |
| ATGTCACTGATATTGATCGA+TGG | 0.655748 | 4:+27642181 | MsG0480019807.01.T01:CDS |
| GTTACGGTAGATATCTTCCG+TGG | 0.656938 | 4:+27643749 | MsG0480019807.01.T01:three_prime_UTR |
| TTGTATGTAGGTACGATCTG+AGG | 0.659027 | 4:+27643315 | MsG0480019807.01.T01:intron |
| GCTCCCTACCACACACGTAG+GGG | 0.659488 | 4:-27643630 | None:intergenic |
| GGACTCTTTATCTAACCAGA+TGG | 0.661378 | 4:+27642202 | MsG0480019807.01.T01:CDS |
| AGTTGATGAAAGAACTATTG+CGG | 0.662211 | 4:+27643516 | MsG0480019807.01.T01:CDS |
| ATATAACTTAGATCAACGCA+CGG | 0.662554 | 4:-27642903 | None:intergenic |
| AAGTTCAAACCGAGACACCA+CGG | 0.678233 | 4:-27643766 | None:intergenic |
| CAGCTCCCTACCACACACGT+AGG | 0.681797 | 4:-27643632 | None:intergenic |
| AAAGAAACACTTTCAAGACA+AGG | 0.682252 | 4:-27643658 | None:intergenic |
| AAGCCTTGAAATGTTGATGG+TGG | 0.685200 | 4:-27642345 | None:intergenic |
| ATAACTTAGATCAACGCACG+GGG | 0.741044 | 4:-27642901 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTATTTGTCTATTAAATAA+TGG | - | Chr4:27641706-27641725 | None:intergenic | 10.0% |
| !! | AATCAATAATATAATTGTGT+TGG | + | Chr4:27643150-27643169 | MsG0480019807.01.T01:intron | 15.0% |
| !! | ATCATTAAAGTTTATGCATA+TGG | - | Chr4:27642931-27642950 | None:intergenic | 20.0% |
| !! | CAATATTCAGAAAACAAATT+AGG | - | Chr4:27641820-27641839 | None:intergenic | 20.0% |
| !! | CATAAACTTTAATGATTCAA+AGG | + | Chr4:27642935-27642954 | MsG0480019807.01.T01:CDS | 20.0% |
| !! | TAAATAACAAAAACAGTATG+TGG | - | Chr4:27643054-27643073 | None:intergenic | 20.0% |
| !!! | ATAATACTAATGAGTTGATT+AGG | - | Chr4:27641601-27641620 | None:intergenic | 20.0% |
| !!! | ATTATTGATTGAAATTCAAG+TGG | - | Chr4:27643140-27643159 | None:intergenic | 20.0% |
| !!! | ATTTAGAATTATTAGAATGC+TGG | + | Chr4:27642316-27642335 | MsG0480019807.01.T01:CDS | 20.0% |
| !!! | ATTTTGTAATTTGAATTCAG+AGG | + | Chr4:27641741-27641760 | MsG0480019807.01.T01:five_prime_UTR | 20.0% |
| !!! | CAAATTGTATTTTTTATGCA+AGG | - | Chr4:27643691-27643710 | None:intergenic | 20.0% |
| !!! | CTAATTTGTTTTCTGAATAT+TGG | + | Chr4:27641818-27641837 | MsG0480019807.01.T01:five_prime_UTR | 20.0% |
| !!! | GATTAACAACTATTTTTTGA+AGG | + | Chr4:27642692-27642711 | MsG0480019807.01.T01:CDS | 20.0% |
| !!! | TTATTGATTGAAATTCAAGT+GGG | - | Chr4:27643139-27643158 | None:intergenic | 20.0% |
| ! | AAAAATAGTTGTTAATCTCC+AGG | - | Chr4:27642689-27642708 | None:intergenic | 25.0% |
| ! | AAGTTTCATACATATGATTG+TGG | - | Chr4:27642769-27642788 | None:intergenic | 25.0% |
| ! | ATCTTAATATCTAGCACAAT+CGG | + | Chr4:27643713-27643732 | MsG0480019807.01.T01:three_prime_UTR | 25.0% |
| ! | ATGTTCAAAAATTGGAGATT+TGG | - | Chr4:27642510-27642529 | None:intergenic | 25.0% |
| ! | TAAAAGGTCATTAGAAGTTT+CGG | - | Chr4:27642067-27642086 | None:intergenic | 25.0% |
| ! | TCATTATCAAACACAAGATT+TGG | - | Chr4:27642036-27642055 | None:intergenic | 25.0% |
| ! | TCGGTAAAAATCATTACTTA+CGG | - | Chr4:27643580-27643599 | None:intergenic | 25.0% |
| ! | TGTAGGTAGTAATTAAAAAG+TGG | - | Chr4:27641651-27641670 | None:intergenic | 25.0% |
| !! | TGGTGCATTTTAAATTTGTA+GGG | - | Chr4:27642749-27642768 | None:intergenic | 25.0% |
| AAAATCATTACTTACGGTCT+AGG | - | Chr4:27643574-27643593 | None:intergenic | 30.0% | |
| AAAGAAACACTTTCAAGACA+AGG | - | Chr4:27643661-27643680 | None:intergenic | 30.0% | |
| AACGCTATAAAATACCTTCA+TGG | + | Chr4:27642268-27642287 | MsG0480019807.01.T01:CDS | 30.0% | |
| AAGAGTTTGTGTTAGAAATC+TGG | + | Chr4:27642232-27642251 | MsG0480019807.01.T01:CDS | 30.0% | |
| AATAGTTCTTTCATCAACTC+CGG | - | Chr4:27643515-27643534 | None:intergenic | 30.0% | |
| AGTATTTGTCTAGTAAGTTC+TGG | + | Chr4:27643251-27643270 | MsG0480019807.01.T01:intron | 30.0% | |
| ATATAACTTAGATCAACGCA+CGG | - | Chr4:27642906-27642925 | None:intergenic | 30.0% | |
| ATGTGGTTTATTATAAGACC+TGG | - | Chr4:27641934-27641953 | None:intergenic | 30.0% | |
| ATTTCCAATTCTCGTAGATT+AGG | - | Chr4:27642996-27643015 | None:intergenic | 30.0% | |
| CTCCATCAATGTTCAAAAAT+TGG | - | Chr4:27642518-27642537 | None:intergenic | 30.0% | |
| GGTAGATAAAATACTTGTTC+TGG | - | Chr4:27641986-27642005 | None:intergenic | 30.0% | |
| TAATCTACGAGAATTGGAAA+TGG | + | Chr4:27642995-27643014 | MsG0480019807.01.T01:CDS | 30.0% | |
| TGACAAGAAAATAACCATGA+AGG | - | Chr4:27642285-27642304 | None:intergenic | 30.0% | |
| TGGTAAACTACTAACTCTAT+CGG | - | Chr4:27641914-27641933 | None:intergenic | 30.0% | |
| ! | ACTCATATAAGCTTGATTTG+TGG | + | Chr4:27643026-27643045 | MsG0480019807.01.T01:intron | 30.0% |
| ! | AGGCACTTTGAAAAGAAAAA+TGG | - | Chr4:27643113-27643132 | None:intergenic | 30.0% |
| ! | CAAGTATTTTATCTACCAAC+TGG | + | Chr4:27641989-27642008 | MsG0480019807.01.T01:CDS | 30.0% |
| ! | CTCCAATTTTTGAACATTGA+TGG | + | Chr4:27642513-27642532 | MsG0480019807.01.T01:CDS | 30.0% |
| ! | GTATTAGAGATTGTGTTGTT+TGG | + | Chr4:27643180-27643199 | MsG0480019807.01.T01:intron | 30.0% |
| ! | GTGGTGCATTTTAAATTTGT+AGG | - | Chr4:27642750-27642769 | None:intergenic | 30.0% |
| !! | AGTTGATGAAAGAACTATTG+CGG | + | Chr4:27643516-27643535 | MsG0480019807.01.T01:CDS | 30.0% |
| !! | ATACTAATGAGTTGATTAGG+TGG | - | Chr4:27641598-27641617 | None:intergenic | 30.0% |
| !! | TCTCTCATTTTTGCCAATTA+AGG | + | Chr4:27641954-27641973 | MsG0480019807.01.T01:CDS | 30.0% |
| !!! | ATGAAGGTATTTTATAGCGT+TGG | - | Chr4:27642269-27642288 | None:intergenic | 30.0% |
| AAACACAAGATTTGGAAGTG+TGG | - | Chr4:27642028-27642047 | None:intergenic | 35.0% | |
| ATACCACCATCAACATTTCA+AGG | + | Chr4:27642342-27642361 | MsG0480019807.01.T01:CDS | 35.0% | |
| ATGTCAATCGTTCAAGCAAA+AGG | - | Chr4:27642446-27642465 | None:intergenic | 35.0% | |
| ATGTCACTGATATTGATCGA+TGG | + | Chr4:27642181-27642200 | MsG0480019807.01.T01:CDS | 35.0% | |
| CAAGTGAAGTATGTGAGAAT+AGG | + | Chr4:27643388-27643407 | MsG0480019807.01.T01:CDS | 35.0% | |
| CATGTACTTATTCTCCATTC+TGG | + | Chr4:27642120-27642139 | MsG0480019807.01.T01:CDS | 35.0% | |
| CGGTAATACCAACATTGTTA+CGG | + | Chr4:27643733-27643752 | MsG0480019807.01.T01:three_prime_UTR | 35.0% | |
| GAAACAAGACAGAAAGTGAA+TGG | - | Chr4:27642836-27642855 | None:intergenic | 35.0% | |
| GAACATTGATGGAGAATTTG+AGG | + | Chr4:27642524-27642543 | MsG0480019807.01.T01:CDS | 35.0% | |
| GATAGAGTTAGTAGTTTACC+AGG | + | Chr4:27641913-27641932 | MsG0480019807.01.T01:CDS | 35.0% | |
| GATATCTACCGTAACAATGT+TGG | - | Chr4:27643744-27643763 | None:intergenic | 35.0% | |
| GGTAAACTACTAACTCTATC+GGG | - | Chr4:27641913-27641932 | None:intergenic | 35.0% | |
| TATAACTTAGATCAACGCAC+GGG | - | Chr4:27642905-27642924 | None:intergenic | 35.0% | |
| TCAAAAAGTTCAAGCTCTCT+CGG | + | Chr4:27642148-27642167 | MsG0480019807.01.T01:CDS | 35.0% | |
| TGCATGAAAACTATTGACCA+GGG | - | Chr4:27641675-27641694 | None:intergenic | 35.0% | |
| TGTGTGTTACGATTGTATGT+AGG | + | Chr4:27643303-27643322 | MsG0480019807.01.T01:intron | 35.0% | |
| TTAATTACTACCTACAACCC+TGG | + | Chr4:27641655-27641674 | MsG0480019807.01.T01:five_prime_UTR | 35.0% | |
| TTGAAGCCTTGAAATGTTGA+TGG | - | Chr4:27642351-27642370 | None:intergenic | 35.0% | |
| TTGACATTGATCAACTTCGA+TGG | + | Chr4:27642459-27642478 | MsG0480019807.01.T01:CDS | 35.0% | |
| TTGCATGAAAACTATTGACC+AGG | - | Chr4:27641676-27641695 | None:intergenic | 35.0% | |
| TTGGCAAAAATGAGAGAATG+TGG | - | Chr4:27641951-27641970 | None:intergenic | 35.0% | |
| ! | AAATAGGCATGGTTTGTCAA+CGG | - | Chr4:27643352-27643371 | None:intergenic | 35.0% |
| ! | GAGAGCTTGAACTTTTTGAT+TGG | - | Chr4:27642147-27642166 | None:intergenic | 35.0% |
| ! | GATTTTTACCGAACTCTTGA+TGG | + | Chr4:27643588-27643607 | MsG0480019807.01.T01:three_prime_UTR | 35.0% |
| ! | GCTTGCTCTTGATAACTAAA+AGG | - | Chr4:27642083-27642102 | None:intergenic | 35.0% |
| ! | GTATTTTATCTACCAACTGG+AGG | + | Chr4:27641992-27642011 | MsG0480019807.01.T01:CDS | 35.0% |
| !! | ACTTTTTGATTGGTCCAGAA+TGG | - | Chr4:27642137-27642156 | None:intergenic | 35.0% |
| !! | ATTGAAATTCAAGTGGGTTG+AGG | - | Chr4:27643133-27643152 | None:intergenic | 35.0% |
| !!! | TGCTCCAGTATTTGGTTTTA+GGG | + | Chr4:27642856-27642875 | MsG0480019807.01.T01:intron | 35.0% |
| AAACTATTGACCAGGGTTGT+AGG | - | Chr4:27641668-27641687 | None:intergenic | 40.0% | |
| AAACTCTTTAACCTGCCATC+TGG | - | Chr4:27642220-27642239 | None:intergenic | 40.0% | |
| AAGCTGATGAAGTCTAACTC+AGG | - | Chr4:27643433-27643452 | None:intergenic | 40.0% | |
| ACATACTTCACTTGCATGAC+TGG | - | Chr4:27643382-27643401 | None:intergenic | 40.0% | |
| ATAACTTAGATCAACGCACG+GGG | - | Chr4:27642904-27642923 | None:intergenic | 40.0% | |
| CAAAAAGTTCAAGCTCTCTC+GGG | + | Chr4:27642149-27642168 | MsG0480019807.01.T01:CDS | 40.0% | |
| CAAACCATGCCTATTTGGAT+CGG | + | Chr4:27643356-27643375 | MsG0480019807.01.T01:CDS | 40.0% | |
| CAACCCCTAAAACCAAATAC+TGG | - | Chr4:27642863-27642882 | None:intergenic | 40.0% | |
| CTCACCTAATCTACGAGAAT+TGG | + | Chr4:27642989-27643008 | MsG0480019807.01.T01:CDS | 40.0% | |
| GAGAACTTCGAAAGCAAACA+AGG | + | Chr4:27642600-27642619 | MsG0480019807.01.T01:CDS | 40.0% | |
| GGACTCTTTATCTAACCAGA+TGG | + | Chr4:27642202-27642221 | MsG0480019807.01.T01:CDS | 40.0% | |
| GTAAATAACTTCAGCTCGTG+AGG | - | Chr4:27643552-27643571 | None:intergenic | 40.0% | |
| GTGAAGTATGTGAGAATAGG+TGG | + | Chr4:27643391-27643410 | MsG0480019807.01.T01:CDS | 40.0% | |
| GTTGACAAACCATGCCTATT+TGG | + | Chr4:27643351-27643370 | MsG0480019807.01.T01:CDS | 40.0% | |
| TCTACGAGAATTGGAAATGG+TGG | + | Chr4:27642998-27643017 | MsG0480019807.01.T01:CDS | 40.0% | |
| TCTTTATCTAACCAGATGGC+AGG | + | Chr4:27642206-27642225 | MsG0480019807.01.T01:CDS | 40.0% | |
| TGAAAGAACTATTGCGGATG+AGG | + | Chr4:27643522-27643541 | MsG0480019807.01.T01:CDS | 40.0% | |
| TTGTATGTAGGTACGATCTG+AGG | + | Chr4:27643315-27643334 | MsG0480019807.01.T01:intron | 40.0% | |
| ! | AAGCCTTGAAATGTTGATGG+TGG | - | Chr4:27642348-27642367 | None:intergenic | 40.0% |
| ! | CTGAAACCTGCTTTAAACGT+CGG | + | Chr4:27643488-27643507 | MsG0480019807.01.T01:CDS | 40.0% |
| ! | GCAGTTTTCCATCAAGAGTT+CGG | - | Chr4:27643599-27643618 | None:intergenic | 40.0% |
| !! | CTTGTTTCTGCTCCAGTATT+TGG | + | Chr4:27642848-27642867 | MsG0480019807.01.T01:intron | 40.0% |
| !! | TCAGTCATCTTTTCTAGCAC+TGG | - | Chr4:27643472-27643491 | None:intergenic | 40.0% |
| !!! | CTGCTCCAGTATTTGGTTTT+AGG | + | Chr4:27642855-27642874 | MsG0480019807.01.T01:intron | 40.0% |
| !!! | GCTCCAGTATTTGGTTTTAG+GGG | + | Chr4:27642857-27642876 | MsG0480019807.01.T01:intron | 40.0% |
| !!! | GGTATTTTATAGCGTTGGTC+TGG | - | Chr4:27642264-27642283 | None:intergenic | 40.0% |
| AAGTTCAAACCGAGACACCA+CGG | - | Chr4:27643769-27643788 | None:intergenic | 45.0% | |
| AGATATCTTCCGTGGTGTCT+CGG | + | Chr4:27643757-27643776 | MsG0480019807.01.T01:three_prime_UTR | 45.0% | |
| GCATGAACGCTCTAGCAATT+TGG | + | Chr4:27642629-27642648 | MsG0480019807.01.T01:CDS | 45.0% | |
| GTTACGGTAGATATCTTCCG+TGG | + | Chr4:27643749-27643768 | MsG0480019807.01.T01:three_prime_UTR | 45.0% | |
| TCTTCAATGAGACGTTGTCG+CGG | - | Chr4:27641564-27641583 | None:intergenic | 45.0% | |
| ! | CTACCAACTGGAGGTACAAA+TGG | + | Chr4:27642001-27642020 | MsG0480019807.01.T01:CDS | 45.0% |
| ! | GTTCTGGCTGCTTCCTTAAT+TGG | - | Chr4:27641970-27641989 | None:intergenic | 45.0% |
| ATCTCCAGGCTGCGTATATG+AGG | - | Chr4:27642675-27642694 | None:intergenic | 50.0% | |
| GCGACAACGTCTCATTGAAG+AGG | + | Chr4:27641563-27641582 | MsG0480019807.01.T01:five_prime_UTR | 50.0% | |
| GGTCCATTTGTACCTCCAGT+TGG | - | Chr4:27642007-27642026 | None:intergenic | 50.0% | |
| GTCTGATACGCAAGGAGACT+GGG | - | Chr4:27641884-27641903 | None:intergenic | 50.0% | |
| GTGAGAATAGGTGGCATCTC+TGG | + | Chr4:27643400-27643419 | MsG0480019807.01.T01:CDS | 50.0% | |
| TCGTTCAAGCAAAAGGCAGC+TGG | - | Chr4:27642439-27642458 | None:intergenic | 50.0% | |
| TCTACCTCATATACGCAGCC+TGG | + | Chr4:27642668-27642687 | MsG0480019807.01.T01:CDS | 50.0% | |
| ! | ACCTGCTTTAAACGTCGGAC+CGG | + | Chr4:27643493-27643512 | MsG0480019807.01.T01:CDS | 50.0% |
| ! | CATGACTGGCCGATCCAAAT+AGG | - | Chr4:27643368-27643387 | None:intergenic | 50.0% |
| ! | GCATGGTTTGTCAACGGAAC+AGG | - | Chr4:27643346-27643365 | None:intergenic | 50.0% |
| AGCTCCCTACCACACACGTA+GGG | - | Chr4:27643634-27643653 | None:intergenic | 55.0% | |
| ATTAGTGCCCCCTACGTGTG+TGG | + | Chr4:27643622-27643641 | MsG0480019807.01.T01:three_prime_UTR | 55.0% | |
| CGTCTGATACGCAAGGAGAC+TGG | - | Chr4:27641885-27641904 | None:intergenic | 55.0% | |
| CTGGCCGATCCAAATAGGCA+TGG | - | Chr4:27643363-27643382 | None:intergenic | 55.0% | |
| CTTAGATCAACGCACGGGGT+AGG | - | Chr4:27642900-27642919 | None:intergenic | 55.0% | |
| GTCTCCTTGCGTATCAGACG+AGG | + | Chr4:27641885-27641904 | MsG0480019807.01.T01:CDS | 55.0% | |
| ! | CACGGGGTAGGAAGCTCTAA+TGG | - | Chr4:27642888-27642907 | None:intergenic | 55.0% |
| ! | TCCGGTCCGACGTTTAAAGC+AGG | - | Chr4:27643497-27643516 | None:intergenic | 55.0% |
| !! | ACACACGTAGGGGGCACTAA+TGG | - | Chr4:27643623-27643642 | None:intergenic | 55.0% |
| CAGCTCCCTACCACACACGT+AGG | - | Chr4:27643635-27643654 | None:intergenic | 60.0% | |
| CGTTGTCGCGGACAGCAGTT+TGG | - | Chr4:27641552-27641571 | None:intergenic | 60.0% | |
| CTCCCTACCACACACGTAGG+GGG | - | Chr4:27643632-27643651 | None:intergenic | 60.0% | |
| GCTCCCTACCACACACGTAG+GGG | - | Chr4:27643633-27643652 | None:intergenic | 60.0% | |
| GGCTCCTCGTCTGATACGCA+AGG | - | Chr4:27641892-27641911 | None:intergenic | 60.0% | |
| TGCCCCCTACGTGTGTGGTA+GGG | + | Chr4:27643627-27643646 | MsG0480019807.01.T01:three_prime_UTR | 60.0% | |
| GTGCCCCCTACGTGTGTGGT+AGG | + | Chr4:27643626-27643645 | MsG0480019807.01.T01:three_prime_UTR | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr4 | gene | 27641551 | 27643849 | 27641551 | ID=MsG0480019807.01;Name=MsG0480019807.01 |
| Chr4 | mRNA | 27641551 | 27643849 | 27641551 | ID=MsG0480019807.01.T01;Parent=MsG0480019807.01;Name=MsG0480019807.01.T01;_AED=0.38;_eAED=0.38;_QI=311|1|1|1|1|1|3|288|414 |
| Chr4 | exon | 27641551 | 27642713 | 27641551 | ID=MsG0480019807.01.T01:exon:5097;Parent=MsG0480019807.01.T01 |
| Chr4 | exon | 27642864 | 27643019 | 27642864 | ID=MsG0480019807.01.T01:exon:5098;Parent=MsG0480019807.01.T01 |
| Chr4 | exon | 27643325 | 27643849 | 27643325 | ID=MsG0480019807.01.T01:exon:5099;Parent=MsG0480019807.01.T01 |
| Chr4 | five_prime_UTR | 27641551 | 27641861 | 27641551 | ID=MsG0480019807.01.T01:five_prime_utr;Parent=MsG0480019807.01.T01 |
| Chr4 | CDS | 27641862 | 27642713 | 27641862 | ID=MsG0480019807.01.T01:cds;Parent=MsG0480019807.01.T01 |
| Chr4 | CDS | 27642864 | 27643019 | 27642864 | ID=MsG0480019807.01.T01:cds;Parent=MsG0480019807.01.T01 |
| Chr4 | CDS | 27643325 | 27643561 | 27643325 | ID=MsG0480019807.01.T01:cds;Parent=MsG0480019807.01.T01 |
| Chr4 | three_prime_UTR | 27643562 | 27643849 | 27643562 | ID=MsG0480019807.01.T01:three_prime_utr;Parent=MsG0480019807.01.T01 |
| Gene Sequence |
| Protein sequence |
