Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480021109.01.T01 | XP_013456242.1 | 96.766 | 402 | 13 | 0 | 7 | 408 | 396 | 797 | 0 | 823 |
| MsG0480021109.01.T02 | XP_013456242.1 | 64.706 | 85 | 0 | 1 | 1 | 55 | 816 | 900 | 2.99E-22 | 100 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480021109.01.T01 | O24370 | 69.975 | 403 | 119 | 2 | 7 | 408 | 389 | 790 | 0 | 619 |
| MsG0480021109.01.T02 | Q8GSM2 | 49.412 | 85 | 13 | 1 | 1 | 55 | 806 | 890 | 6.58E-18 | 80.1 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480021109.01.T01 | A0A072UMH4 | 96.766 | 402 | 13 | 0 | 7 | 408 | 396 | 797 | 0.0 | 823 |
| MsG0480021109.01.T02 | A0A072UMH4 | 64.706 | 85 | 0 | 1 | 1 | 55 | 816 | 900 | 1.43e-22 | 100 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048969.01 | MsG0480021109.01 | 0.830349 | 3.087152e-55 | 3.244320e-52 |
| MsG0080049016.01 | MsG0480021109.01 | 0.833707 | 4.568398e-56 | 5.303280e-53 |
| MsG0080049018.01 | MsG0480021109.01 | 0.801571 | 8.455141e-49 | 4.051389e-46 |
| MsG0180000127.01 | MsG0480021109.01 | 0.825931 | 3.581613e-54 | 3.310896e-51 |
| MsG0180001615.01 | MsG0480021109.01 | 0.815355 | 9.646903e-52 | 6.635944e-49 |
| MsG0180001827.01 | MsG0480021109.01 | 0.838626 | 2.571394e-57 | 3.464172e-54 |
| MsG0180001907.01 | MsG0480021109.01 | 0.819526 | 1.109149e-52 | 8.556429e-50 |
| MsG0180002891.01 | MsG0480021109.01 | 0.827300 | 1.688623e-54 | 1.623746e-51 |
| MsG0180004164.01 | MsG0480021109.01 | 0.825963 | 3.518276e-54 | 3.255356e-51 |
| MsG0180004193.01 | MsG0480021109.01 | 0.803672 | 3.117510e-49 | 1.576005e-46 |
| MsG0180004277.01 | MsG0480021109.01 | 0.808685 | 2.742294e-50 | 1.578059e-47 |
| MsG0180004988.01 | MsG0480021109.01 | 0.802514 | 5.412431e-49 | 2.656309e-46 |
| MsG0180005991.01 | MsG0480021109.01 | 0.838561 | 2.673514e-57 | 3.594305e-54 |
| MsG0280010584.01 | MsG0480021109.01 | 0.855206 | 7.368613e-62 | 1.687907e-58 |
| MsG0280011222.01 | MsG0480021109.01 | 0.811981 | 5.332639e-51 | 3.348872e-48 |
| MsG0380012251.01 | MsG0480021109.01 | 0.837378 | 5.386362e-57 | 6.983124e-54 |
| MsG0380012583.01 | MsG0480021109.01 | 0.839413 | 1.608439e-57 | 2.219627e-54 |
| MsG0380014168.01 | MsG0480021109.01 | 0.822127 | 2.796738e-53 | 2.320194e-50 |
| MsG0380014411.01 | MsG0480021109.01 | 0.810141 | 1.335960e-50 | 7.990327e-48 |
| MsG0380014530.01 | MsG0480021109.01 | 0.806059 | 9.888138e-50 | 5.315452e-47 |
| MsG0380014794.01 | MsG0480021109.01 | 0.816043 | 6.776701e-52 | 4.750515e-49 |
| MsG0480018844.01 | MsG0480021109.01 | 0.802458 | 5.557128e-49 | 2.723572e-46 |
| MsG0480018910.01 | MsG0480021109.01 | 0.800952 | 1.132310e-48 | 5.341662e-46 |
| MsG0480019693.01 | MsG0480021109.01 | 0.842365 | 2.703634e-58 | 4.090281e-55 |
| MsG0480019807.01 | MsG0480021109.01 | 0.815646 | 8.309523e-52 | 5.762154e-49 |
| MsG0480019974.01 | MsG0480021109.01 | 0.800218 | 1.597458e-48 | 7.396859e-46 |
| MsG0480020433.01 | MsG0480021109.01 | 0.807639 | 4.582363e-50 | 2.565594e-47 |
| MsG0480021109.01 | MsG0480021111.01 | 0.945345 | 3.632630e-104 | 5.519807e-99 |
| MsG0480021109.01 | MsG0480021563.01 | 0.808318 | 3.284573e-50 | 1.872231e-47 |
| MsG0480021109.01 | MsG0480021788.01 | 0.802614 | 5.159635e-49 | 2.538835e-46 |
| MsG0480021109.01 | MsG0480021789.01 | 0.810698 | 1.012961e-50 | 6.148698e-48 |
| MsG0480021109.01 | MsG0480021892.01 | 0.841409 | 4.835054e-58 | 7.098607e-55 |
| MsG0480021109.01 | MsG0480021999.01 | 0.835250 | 1.871407e-56 | 2.275829e-53 |
| MsG0480021109.01 | MsG0480022002.01 | 0.829508 | 4.950050e-55 | 5.076460e-52 |
| MsG0480021109.01 | MsG0480022150.01 | 0.830121 | 3.509242e-55 | 3.663507e-52 |
| MsG0480021109.01 | MsG0480022935.01 | 0.862557 | 4.656900e-64 | 1.369459e-60 |
| MsG0480021109.01 | MsG0480023148.01 | 0.811705 | 6.126031e-51 | 3.818729e-48 |
| MsG0480021109.01 | MsG0480023616.01 | 0.809615 | 1.733568e-50 | 1.022723e-47 |
| MsG0480021109.01 | MsG0480023998.01 | 0.834130 | 3.580993e-56 | 4.210305e-53 |
| MsG0480021109.01 | MsG0580024665.01 | 0.807096 | 5.971226e-50 | 3.296372e-47 |
| MsG0480021109.01 | MsG0580024820.01 | 0.835462 | 1.655009e-56 | 2.025252e-53 |
| MsG0480021109.01 | MsG0580025373.01 | 0.812317 | 4.506569e-51 | 2.856057e-48 |
| MsG0480021109.01 | MsG0580028013.01 | 0.804749 | 1.860134e-49 | 9.668913e-47 |
| MsG0480021109.01 | MsG0580028093.01 | 0.811266 | 7.628879e-51 | 4.700872e-48 |
| MsG0480021109.01 | MsG0580028397.01 | 0.838408 | 2.927319e-57 | 3.917287e-54 |
| MsG0480021109.01 | MsG0580028398.01 | 0.822863 | 1.886718e-53 | 1.598421e-50 |
| MsG0480021109.01 | MsG0580028403.01 | 0.818522 | 1.875886e-52 | 1.407468e-49 |
| MsG0480021109.01 | MsG0680030644.01 | 0.810070 | 1.384005e-50 | 8.262456e-48 |
| MsG0480021109.01 | MsG0680031791.01 | 0.813708 | 2.232873e-51 | 1.468897e-48 |
| MsG0480021109.01 | MsG0680032000.01 | 0.823517 | 1.327668e-53 | 1.145711e-50 |
| MsG0480021109.01 | MsG0680032002.01 | 0.818102 | 2.335583e-52 | 1.732076e-49 |
| MsG0480021109.01 | MsG0680032003.01 | 0.814647 | 1.384675e-51 | 9.343855e-49 |
| MsG0480021109.01 | MsG0680032274.01 | 0.801772 | 7.692019e-49 | 3.704408e-46 |
| MsG0480021109.01 | MsG0680032275.01 | 0.808662 | 2.774706e-50 | 1.595716e-47 |
| MsG0480021109.01 | MsG0680033952.01 | 0.820643 | 6.153373e-53 | 4.896282e-50 |
| MsG0480021109.01 | MsG0680035612.01 | 0.823390 | 1.421248e-53 | 1.221941e-50 |
| MsG0480021109.01 | MsG0680035831.01 | 0.819310 | 1.241965e-52 | 9.522550e-50 |
| MsG0480021109.01 | MsG0780036424.01 | 0.810907 | 9.124603e-51 | 5.569783e-48 |
| MsG0480021109.01 | MsG0780036583.01 | 0.829771 | 4.273014e-55 | 4.416560e-52 |
| MsG0480021109.01 | MsG0780036584.01 | 0.851696 | 7.499494e-61 | 1.530571e-57 |
| MsG0480021109.01 | MsG0780038115.01 | 0.807336 | 5.311482e-50 | 2.950653e-47 |
| MsG0480021109.01 | MsG0780038334.01 | 0.801421 | 9.074476e-49 | 4.331809e-46 |
| MsG0480021109.01 | MsG0780038337.01 | 0.821391 | 4.139225e-53 | 3.363128e-50 |
| MsG0480021109.01 | MsG0780039256.01 | 0.801688 | 7.999768e-49 | 3.844501e-46 |
| MsG0480021109.01 | MsG0780039339.01 | 0.822968 | 1.782924e-53 | 1.514961e-50 |
| MsG0480021109.01 | MsG0780040701.01 | 0.826175 | 3.132708e-54 | 2.916081e-51 |
| MsG0480021109.01 | MsG0780041588.01 | 0.820197 | 7.789751e-53 | 6.122924e-50 |
| MsG0480021109.01 | MsG0780041617.01 | 0.844864 | 5.804784e-59 | 9.497712e-56 |
| MsG0480021109.01 | MsG0780041618.01 | 0.854629 | 1.083898e-61 | 2.435913e-58 |
| MsG0480021109.01 | MsG0880042921.01 | 0.823317 | 1.478328e-53 | 1.268493e-50 |
| MsG0480021109.01 | MsG0880042922.01 | 0.838578 | 2.645519e-57 | 3.558765e-54 |
| MsG0480021109.01 | MsG0880043156.01 | 0.854951 | 8.743526e-62 | 1.986070e-58 |
| MsG0480021109.01 | MsG0880044333.01 | 0.803801 | 2.931400e-49 | 1.486903e-46 |
| MsG0480021109.01 | MsG0880045150.01 | 0.820078 | 8.293929e-53 | 6.498086e-50 |
| MsG0480021109.01 | MsG0880045170.01 | 0.805404 | 1.356838e-49 | 7.172224e-47 |
| MsG0480021109.01 | MsG0880045259.01 | 0.820770 | 5.754349e-53 | 4.595224e-50 |
| MsG0480021109.01 | MsG0880045377.01 | 0.839779 | 1.292028e-57 | 1.802995e-54 |
| MsG0480021109.01 | MsG0880045400.01 | 0.822354 | 2.477468e-53 | 2.068789e-50 |
| MsG0480021109.01 | MsG0880045409.01 | 0.817809 | 2.720390e-52 | 2.001448e-49 |
| MsG0480021109.01 | MsG0880045423.01 | 0.832656 | 8.345887e-56 | 9.389529e-53 |
| MsG0480021109.01 | MsG0880045899.01 | 0.808519 | 2.975935e-50 | 1.705206e-47 |
| MsG0480021109.01 | MsG0880045923.01 | 0.810673 | 1.025421e-50 | 6.220171e-48 |
| MsG0480021109.01 | MsG0880046406.01 | 0.834752 | 2.499764e-56 | 2.994093e-53 |
| MsG0480021109.01 | MsG0880046456.01 | 0.805278 | 1.442122e-49 | 7.597976e-47 |
| MsG0480021109.01 | MsG0880046540.01 | 0.802759 | 4.816802e-49 | 2.378952e-46 |
| MsG0480021109.01 | MsG0880046549.01 | 0.807417 | 5.107108e-50 | 2.843048e-47 |
| MsG0480021109.01 | MsG0880046574.01 | 0.839798 | 1.277572e-57 | 1.783932e-54 |
| MsG0480021109.01 | MsG0880046584.01 | 0.801508 | 8.710383e-49 | 4.167176e-46 |
| MsG0480021109.01 | MsG0880046639.01 | 0.808827 | 2.558336e-50 | 1.477698e-47 |
| MsG0480021109.01 | MsG0880046968.01 | 0.826694 | 2.357268e-54 | 2.226851e-51 |
| MsG0480021109.01 | MsG0880046969.01 | 0.809923 | 1.488700e-50 | 8.853529e-48 |
| MsG0480021109.01 | MsG0880047112.01 | 0.812463 | 4.186510e-51 | 2.663792e-48 |
| MsG0380015501.01 | MsG0480021109.01 | 0.815824 | 7.585616e-52 | 5.285350e-49 |
| MsG0380017353.01 | MsG0480021109.01 | 0.805117 | 1.558387e-49 | 8.177072e-47 |
| MsG0480018098.01 | MsG0480021109.01 | 0.804531 | 2.065545e-49 | 1.067521e-46 |
| MsG0480018100.01 | MsG0480021109.01 | 0.822467 | 2.332636e-53 | 1.954027e-50 |
| MsG0480018323.01 | MsG0480021109.01 | 0.802348 | 5.853642e-49 | 2.860999e-46 |
| MsG0280006587.01 | MsG0480021109.01 | 0.812961 | 3.256814e-51 | 2.099408e-48 |
| MsG0280007036.01 | MsG0480021109.01 | 0.806527 | 7.877437e-50 | 4.285325e-47 |
| MsG0280007047.01 | MsG0480021109.01 | 0.813365 | 2.655350e-51 | 1.730694e-48 |
| MsG0280007600.01 | MsG0480021109.01 | 0.828587 | 8.273046e-55 | 8.258633e-52 |
| MsG0280008233.01 | MsG0480021109.01 | 0.834453 | 2.971912e-56 | 3.528562e-53 |
| MsG0280008531.01 | MsG0480021109.01 | 0.812805 | 3.524340e-51 | 2.262398e-48 |
| MsG0280008939.01 | MsG0480021109.01 | 0.811771 | 5.925588e-51 | 3.700363e-48 |
| MsG0280009434.01 | MsG0480021109.01 | 0.836685 | 8.095097e-57 | 1.027759e-53 |
| MsG0280009520.01 | MsG0480021109.01 | 0.845803 | 3.234432e-59 | 5.454634e-56 |
| MsG0280010523.01 | MsG0480021109.01 | 0.843605 | 1.264334e-58 | 1.988688e-55 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480021109.01.T01 | MTR_4g066170 | 96.766 | 402 | 13 | 0 | 7 | 408 | 396 | 797 | 0.0 | 823 |
| MsG0480021109.01.T01 | MTR_3g479460 | 67.413 | 402 | 130 | 1 | 7 | 408 | 394 | 794 | 0.0 | 607 |
| MsG0480021109.01.T01 | MTR_3g079450 | 69.018 | 397 | 122 | 1 | 10 | 406 | 396 | 791 | 0.0 | 603 |
| MsG0480021109.01.T01 | MTR_3g079420 | 70.500 | 400 | 116 | 2 | 10 | 408 | 358 | 756 | 0.0 | 594 |
| MsG0480021109.01.T01 | MTR_8g080230 | 55.276 | 398 | 174 | 3 | 10 | 407 | 411 | 804 | 8.55e-163 | 481 |
| MsG0480021109.01.T01 | MTR_8g020970 | 53.500 | 400 | 182 | 3 | 7 | 406 | 420 | 815 | 2.53e-155 | 462 |
| MsG0480021109.01.T01 | MTR_8g018730 | 52.296 | 392 | 178 | 6 | 14 | 403 | 86 | 470 | 4.43e-137 | 404 |
| MsG0480021109.01.T01 | MTR_5g024020 | 53.665 | 382 | 170 | 6 | 14 | 393 | 369 | 745 | 7.09e-135 | 407 |
| MsG0480021109.01.T01 | MTR_1g104650 | 51.562 | 384 | 180 | 5 | 14 | 395 | 352 | 731 | 1.22e-134 | 407 |
| MsG0480021109.01.T01 | MTR_8g018730 | 52.296 | 392 | 178 | 6 | 14 | 403 | 336 | 720 | 2.97e-134 | 405 |
| MsG0480021109.01.T01 | MTR_8g018730 | 52.296 | 392 | 178 | 6 | 14 | 403 | 366 | 750 | 8.15e-134 | 405 |
| MsG0480021109.01.T01 | MTR_8g018735 | 52.344 | 384 | 176 | 5 | 14 | 395 | 367 | 745 | 1.31e-133 | 404 |
| MsG0480021109.01.T01 | MTR_8g018420 | 51.571 | 382 | 179 | 6 | 14 | 393 | 356 | 733 | 1.17e-132 | 402 |
| MsG0480021109.01.T01 | MTR_7g113410 | 51.157 | 389 | 184 | 5 | 7 | 393 | 361 | 745 | 2.11e-132 | 401 |
| MsG0480021109.01.T01 | MTR_1g083020 | 52.185 | 389 | 180 | 5 | 7 | 393 | 352 | 736 | 3.98e-132 | 400 |
| MsG0480021109.01.T01 | MTR_2g099560 | 51.823 | 384 | 177 | 6 | 14 | 395 | 366 | 743 | 4.32e-132 | 400 |
| MsG0480021109.01.T01 | MTR_8g018570 | 51.031 | 388 | 184 | 5 | 10 | 395 | 366 | 749 | 7.90e-130 | 395 |
| MsG0480021109.01.T01 | MTR_2g099570 | 49.872 | 391 | 190 | 5 | 11 | 399 | 359 | 745 | 1.06e-129 | 394 |
| MsG0480021109.01.T01 | MTR_4g088810 | 48.705 | 386 | 190 | 3 | 14 | 399 | 401 | 778 | 1.06e-129 | 395 |
| MsG0480021109.01.T01 | MTR_8g018430 | 50.256 | 390 | 176 | 6 | 14 | 395 | 361 | 740 | 3.00e-129 | 393 |
| MsG0480021109.01.T01 | MTR_8g018510 | 50.508 | 394 | 177 | 6 | 14 | 399 | 369 | 752 | 3.30e-129 | 393 |
| MsG0480021109.01.T01 | MTR_3g079450 | 69.412 | 255 | 78 | 0 | 10 | 264 | 396 | 650 | 4.16e-129 | 386 |
| MsG0480021109.01.T01 | MTR_8g018520 | 49.257 | 404 | 186 | 7 | 14 | 408 | 368 | 761 | 9.18e-129 | 392 |
| MsG0480021109.01.T01 | MTR_8g018690 | 49.246 | 398 | 184 | 6 | 10 | 399 | 341 | 728 | 5.65e-128 | 389 |
| MsG0480021109.01.T01 | MTR_8g018550 | 51.554 | 386 | 181 | 5 | 10 | 393 | 364 | 745 | 1.06e-127 | 389 |
| MsG0480021109.01.T01 | MTR_8g020990 | 50.777 | 386 | 184 | 5 | 10 | 393 | 364 | 745 | 1.08e-127 | 389 |
| MsG0480021109.01.T01 | MTR_8g018690 | 49.246 | 398 | 184 | 6 | 10 | 399 | 361 | 748 | 1.17e-127 | 389 |
| MsG0480021109.01.T01 | MTR_3g081130 | 48.861 | 395 | 195 | 6 | 10 | 401 | 282 | 672 | 8.94e-127 | 384 |
| MsG0480021109.01.T01 | MTR_3g081130 | 48.861 | 395 | 195 | 6 | 10 | 401 | 354 | 744 | 1.26e-126 | 386 |
| MsG0480021109.01.T01 | MTR_8g018450 | 49.614 | 389 | 190 | 6 | 14 | 399 | 326 | 711 | 4.09e-126 | 384 |
| MsG0480021109.01.T01 | MTR_8g018590 | 48.985 | 394 | 191 | 7 | 7 | 395 | 314 | 702 | 4.06e-120 | 368 |
| MsG0480021109.01.T01 | MTR_5g024020 | 49.738 | 382 | 149 | 6 | 14 | 393 | 369 | 709 | 5.01e-120 | 368 |
| MsG0480021109.01.T01 | MTR_8g018650 | 47.654 | 405 | 193 | 5 | 5 | 408 | 314 | 700 | 6.16e-118 | 362 |
| MsG0480021109.01.T01 | MTR_8g018620 | 47.558 | 389 | 186 | 4 | 5 | 393 | 314 | 684 | 8.17e-116 | 357 |
| MsG0480021109.01.T01 | MTR_8g011340 | 43.333 | 390 | 208 | 7 | 9 | 395 | 367 | 746 | 1.04e-104 | 328 |
| MsG0480021109.01.T01 | MTR_6g452500 | 42.821 | 390 | 207 | 8 | 9 | 395 | 125 | 501 | 6.68e-103 | 318 |
| MsG0480021109.01.T01 | MTR_8g020970 | 53.876 | 258 | 118 | 1 | 7 | 264 | 420 | 676 | 6.98e-96 | 301 |
| MsG0480021109.01.T01 | MTR_8g021020 | 48.814 | 295 | 147 | 3 | 101 | 393 | 16 | 308 | 5.72e-91 | 281 |
| MsG0480021109.01.T01 | MTR_8g018735 | 50.988 | 253 | 118 | 4 | 14 | 264 | 367 | 615 | 2.29e-76 | 249 |
| MsG0480021109.01.T01 | MTR_7g012030 | 68.908 | 119 | 37 | 0 | 166 | 284 | 85 | 203 | 2.16e-56 | 185 |
| MsG0480021109.01.T01 | MTR_8g463810 | 43.556 | 225 | 63 | 2 | 76 | 300 | 197 | 357 | 9.11e-53 | 181 |
| MsG0480021109.01.T01 | MTR_6g046330 | 62.308 | 130 | 38 | 1 | 166 | 284 | 75 | 204 | 1.20e-50 | 173 |
| MsG0480021109.01.T02 | MTR_4g066170 | 64.706 | 85 | 0 | 1 | 1 | 55 | 816 | 900 | 3.62e-26 | 100 |
| MsG0480021109.01.T02 | MTR_3g479460 | 45.882 | 85 | 16 | 1 | 1 | 55 | 813 | 897 | 1.46e-16 | 73.6 |
| MsG0480021109.01.T02 | MTR_3g079450 | 43.529 | 85 | 18 | 1 | 1 | 55 | 812 | 896 | 1.35e-13 | 65.1 |
| MsG0480021109.01.T02 | MTR_3g079420 | 61.364 | 44 | 17 | 0 | 3 | 46 | 777 | 820 | 2.03e-13 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480021109.01.T01 | AT3G45140 | 65.578 | 398 | 136 | 1 | 10 | 407 | 390 | 786 | 0.0 | 568 |
| MsG0480021109.01.T01 | AT3G45140 | 65.578 | 398 | 136 | 1 | 10 | 407 | 248 | 644 | 0.0 | 565 |
| MsG0480021109.01.T01 | AT1G67560 | 51.896 | 422 | 183 | 6 | 1 | 406 | 387 | 804 | 2.14e-155 | 462 |
| MsG0480021109.01.T01 | AT1G17420 | 52.750 | 400 | 185 | 3 | 7 | 406 | 412 | 807 | 5.14e-151 | 451 |
| MsG0480021109.01.T01 | AT1G72520 | 52.357 | 403 | 186 | 5 | 7 | 407 | 417 | 815 | 7.30e-149 | 446 |
| MsG0480021109.01.T01 | AT3G22400 | 51.508 | 398 | 185 | 6 | 7 | 402 | 375 | 766 | 2.95e-137 | 414 |
| MsG0480021109.01.T01 | AT1G55020 | 52.632 | 399 | 179 | 7 | 7 | 401 | 353 | 745 | 6.81e-137 | 412 |
| MsG0480021109.01.T02 | AT3G45140 | 63.043 | 46 | 17 | 0 | 1 | 46 | 806 | 851 | 1.12e-14 | 68.2 |
| MsG0480021109.01.T02 | AT3G45140 | 63.043 | 46 | 17 | 0 | 1 | 46 | 664 | 709 | 1.39e-14 | 67.8 |
Find 122 sgRNAs with CRISPR-Local
Find 161 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAACTTGACCCTAAAATTTA+TGG | 0.171306 | 4:-53607419 | MsG0480021109.01.T01:CDS |
| CACACCATCTCTAATATATT+TGG | 0.188352 | 4:+53605646 | None:intergenic |
| CAAATGATGGTCTTATTCTT+TGG | 0.204203 | 4:-53606422 | MsG0480021109.01.T01:CDS |
| CATCATGCTGCGGTGAATTT+TGG | 0.226534 | 4:-53606186 | MsG0480021109.01.T01:CDS |
| CTGCTAGTCCTCTATGGATT+AGG | 0.276392 | 4:+53606502 | None:intergenic |
| CTTGAAGGCACAACATTATA+TGG | 0.278755 | 4:-53607109 | MsG0480021109.01.T01:CDS |
| CGTGCAATGGCCGGTCTATT+AGG | 0.281859 | 4:+53606138 | None:intergenic |
| TTTAGGCCATGTGGGGCATT+TGG | 0.297732 | 4:+53606471 | None:intergenic |
| TGGTTTAGGGATGAAGAATT+TGG | 0.299482 | 4:-53607632 | MsG0480021109.01.T01:CDS |
| AAGTTGGATTGGATATAATT+TGG | 0.300003 | 4:+53605622 | None:intergenic |
| GTAAAGACTTGCCTCCATTC+TGG | 0.301347 | 4:+53607001 | None:intergenic |
| CATTCTGGCTTTCCGCCAAT+TGG | 0.310117 | 4:+53607016 | None:intergenic |
| CTTGGCACTCAACTGGTGTT+TGG | 0.311025 | 4:-53606973 | MsG0480021109.01.T01:CDS |
| AAATGATGGTCTTATTCTTT+GGG | 0.323159 | 4:-53606421 | MsG0480021109.01.T01:CDS |
| ACTCAACTGGTGTTTGGCTT+TGG | 0.325509 | 4:-53606967 | MsG0480021109.01.T01:CDS |
| TATAATGTTAAATAAAGTTT+TGG | 0.327389 | 4:-53605676 | MsG0480021109.01.T01:three_prime_UTR |
| TACCAAGAGGGAGAGTTGTT+TGG | 0.336952 | 4:+53606581 | None:intergenic |
| ACATCAGAGCCTGGTGTAAC+AGG | 0.346010 | 4:-53605783 | MsG0480021109.01.T01:three_prime_UTR |
| CAACTGGTGTTTGGCTTTGG+AGG | 0.346039 | 4:-53606964 | MsG0480021109.01.T01:CDS |
| TTTGGGATACTATCAAATCT+TGG | 0.346372 | 4:-53606404 | MsG0480021109.01.T01:CDS |
| TCAAAAGCAGCTTTAATCAT+TGG | 0.348931 | 4:+53605920 | None:intergenic |
| ACCAAGAGGGAGAGTTGTTT+GGG | 0.361033 | 4:+53606582 | None:intergenic |
| CCTCTATGGATTAGGTCATT+TGG | 0.362847 | 4:+53606510 | None:intergenic |
| AAATAGTGACGACCATTGTT+TGG | 0.375344 | 4:-53606221 | MsG0480021109.01.T01:CDS |
| CTGTTTGTTGCTATAATGTA+AGG | 0.375603 | 4:+53606732 | None:intergenic |
| ACCATTGTTTGGATTACATC+GGG | 0.389981 | 4:-53606210 | MsG0480021109.01.T01:CDS |
| TGGCAGAGGACAGATTCTTT+TGG | 0.392055 | 4:-53607652 | MsG0480021109.01.T01:CDS |
| AGGAATGCTATATGAAGTTC+AGG | 0.398452 | 4:-53605851 | MsG0480021109.01.T01:three_prime_UTR |
| TTGGGATACTATCAAATCTT+GGG | 0.406679 | 4:-53606403 | MsG0480021109.01.T01:CDS |
| ACACCTACTTGGCACTCAAC+TGG | 0.407754 | 4:-53606980 | MsG0480021109.01.T01:CDS |
| AAAGTTTAAAGGGAGGTTGA+TGG | 0.425696 | 4:-53605897 | MsG0480021109.01.T01:three_prime_UTR |
| ATAAGACCATCATTTGCATA+AGG | 0.432398 | 4:+53606429 | None:intergenic |
| TAATCCTTGTTGCATCCAAT+TGG | 0.438384 | 4:-53607588 | MsG0480021109.01.T01:CDS |
| AATGGGTGGTGATTTGAATA+TGG | 0.440072 | 4:-53607672 | MsG0480021109.01.T01:CDS |
| GAGTTAGCTCGGCCGCCAAT+TGG | 0.451009 | 4:-53607031 | MsG0480021109.01.T01:CDS |
| GGCAAGTCTTTACACCTACT+TGG | 0.451346 | 4:-53606991 | MsG0480021109.01.T01:CDS |
| ACCAGTGACTAACAAGTTGA+TGG | 0.456313 | 4:+53606903 | None:intergenic |
| CATGTCCTTGCTCATGACTC+TGG | 0.457266 | 4:-53606929 | MsG0480021109.01.T01:CDS |
| GTTGGCTTCAAAAGCTCATA+AGG | 0.458492 | 4:+53605804 | None:intergenic |
| AGTAGTATACCGTGACCAAT+TGG | 0.462083 | 4:+53607573 | None:intergenic |
| GTCAAGTCATTCGCCGGATG+AGG | 0.467476 | 4:-53605984 | MsG0480021109.01.T01:three_prime_UTR |
| TCTGGCTTTCCGCCAATTGG+CGG | 0.468670 | 4:+53607019 | None:intergenic |
| TCGCCGGATGAGGAATATCT+TGG | 0.470343 | 4:-53605974 | MsG0480021109.01.T01:three_prime_UTR |
| ATGAGCAAGGACATGAGCTT+TGG | 0.474874 | 4:+53606937 | None:intergenic |
| GGAAGTAATAGTTTGTAGAT+TGG | 0.475694 | 4:+53606690 | None:intergenic |
| GTGGTTATTGCTGACTCAGC+AGG | 0.477086 | 4:+53607395 | None:intergenic |
| TCTCCAAGATATTCCTCATC+CGG | 0.481001 | 4:+53605971 | None:intergenic |
| ATGAAGTTCAGGAATAGAAA+TGG | 0.481339 | 4:-53605840 | MsG0480021109.01.T01:three_prime_UTR |
| GTTACACCAGGCTCTGATGT+TGG | 0.481878 | 4:+53605786 | None:intergenic |
| GAGCCTGGTGTAACAGGAAA+AGG | 0.483878 | 4:-53605777 | MsG0480021109.01.T01:three_prime_UTR |
| GAGAAACGATTGAGCCGGCT+TGG | 0.485512 | 4:-53605952 | MsG0480021109.01.T01:three_prime_UTR |
| TAAGACCATCATTTGCATAA+GGG | 0.494543 | 4:+53606430 | None:intergenic |
| TGGATGTAATCAAGTTGGAT+TGG | 0.498292 | 4:+53605611 | None:intergenic |
| GGGAGGTTGATGGAGCTTGA+AGG | 0.499581 | 4:-53605887 | MsG0480021109.01.T01:three_prime_UTR |
| ACGGTCTCAATGTGCTATCA+TGG | 0.506109 | 4:+53607062 | None:intergenic |
| TTCAGGAATAGAAATGGTGC+TGG | 0.509228 | 4:-53605834 | MsG0480021109.01.T01:three_prime_UTR |
| AAGACCCTTCGGACAGCGAA+TGG | 0.509994 | 4:-53606098 | MsG0480021109.01.T01:CDS |
| TTGACTCATTGTTATAGTAG+TGG | 0.511572 | 4:+53606364 | None:intergenic |
| ATGTTGTTTCGTGCAATGGC+CGG | 0.516262 | 4:+53606129 | None:intergenic |
| TATGGATTAGGTCATTTGGA+AGG | 0.517217 | 4:+53606514 | None:intergenic |
| TTGAAGCCAACATCAGAGCC+TGG | 0.522494 | 4:-53605792 | MsG0480021109.01.T01:three_prime_UTR |
| TTTGGAAGACAGACTATAGC+AGG | 0.522688 | 4:-53607614 | MsG0480021109.01.T01:CDS |
| AGGCATGTTGTTTCGTGCAA+TGG | 0.525554 | 4:+53606125 | None:intergenic |
| AGACCCTTCGGACAGCGAAT+GGG | 0.527739 | 4:-53606097 | MsG0480021109.01.T01:CDS |
| GCGCTTGGATGTAATCAAGT+TGG | 0.528663 | 4:+53605606 | None:intergenic |
| CAATAGCTTATGATAAGCAT+TGG | 0.529618 | 4:-53606554 | MsG0480021109.01.T01:CDS |
| ATTGGTTCCTCTTGCCAAGC+CGG | 0.531139 | 4:+53605938 | None:intergenic |
| TCCCAAACAACTCTCCCTCT+TGG | 0.531245 | 4:-53606583 | MsG0480021109.01.T01:CDS |
| ACCATCAACTTGTTAGTCAC+TGG | 0.535909 | 4:-53606904 | MsG0480021109.01.T01:intron |
| GCACAACATTATATGGATCA+AGG | 0.536766 | 4:-53607102 | MsG0480021109.01.T01:CDS |
| TCCATTGTGTATCTAAAATG+TGG | 0.538918 | 4:+53606669 | None:intergenic |
| ATGGATTAGGTCATTTGGAA+GGG | 0.539773 | 4:+53606515 | None:intergenic |
| TTAGCTCGGCCGCCAATTGG+CGG | 0.540332 | 4:-53607028 | MsG0480021109.01.T01:CDS |
| GATTACCCTTATGCAAATGA+TGG | 0.542032 | 4:-53606435 | MsG0480021109.01.T01:CDS |
| CTGTCCGAAGGGTCTTCTGT+AGG | 0.547242 | 4:+53606105 | None:intergenic |
| GAGGAAGTCAGAAAACTTGA+AGG | 0.554158 | 4:-53607124 | MsG0480021109.01.T01:CDS |
| TCTTGGAGAAACGATTGAGC+CGG | 0.561911 | 4:-53605957 | MsG0480021109.01.T01:three_prime_UTR |
| GAAGCACTTATAAATGCAGA+TGG | 0.564500 | 4:-53606627 | MsG0480021109.01.T01:CDS |
| CGTTGGCGATCGAGTTAGCT+CGG | 0.566042 | 4:-53607042 | MsG0480021109.01.T01:CDS |
| GTCATAGCTTGAATTTGCGA+AGG | 0.572643 | 4:+53606031 | None:intergenic |
| AGTTCCCATTCGCTGTCCGA+AGG | 0.574184 | 4:+53606093 | None:intergenic |
| CCAAATGACCTAATCCATAG+AGG | 0.574379 | 4:-53606510 | MsG0480021109.01.T01:CDS |
| GACCATTGTTTGGATTACAT+CGG | 0.574726 | 4:-53606211 | MsG0480021109.01.T01:CDS |
| TTTCTGACTTCCTCGACCAA+CGG | 0.578983 | 4:+53607133 | None:intergenic |
| CAATTGGCGGAAAGCCAGAA+TGG | 0.580426 | 4:-53607015 | MsG0480021109.01.T01:CDS |
| TTGTTGCTCAATCATTTCAG+TGG | 0.580753 | 4:+53607376 | None:intergenic |
| ACACCAGTTGAGTGCCAAGT+AGG | 0.585215 | 4:+53606977 | None:intergenic |
| GATTGAGCCGGCTTGGCAAG+AGG | 0.589180 | 4:-53605945 | MsG0480021109.01.T01:three_prime_UTR |
| GTTCCCATTCGCTGTCCGAA+GGG | 0.597179 | 4:+53606094 | None:intergenic |
| TTTGGTCAGTATACTTACGC+TGG | 0.598381 | 4:-53606168 | MsG0480021109.01.T01:CDS |
| TGAATTTACTCATCAATGGG+TGG | 0.598831 | 4:-53607686 | None:intergenic |
| TGCTATAATGTAAGGCTCTG+TGG | 0.599707 | 4:+53606740 | None:intergenic |
| CATGCCTACAGAAGACCCTT+CGG | 0.600883 | 4:-53606109 | MsG0480021109.01.T01:CDS |
| TCTATTTGAGACACATGTTG+TGG | 0.603437 | 4:-53605739 | MsG0480021109.01.T01:three_prime_UTR |
| TGGTATGAGATTAGAAATGT+TGG | 0.603834 | 4:-53606306 | MsG0480021109.01.T01:CDS |
| TTGAAGGTATAATAGATGAG+AGG | 0.604595 | 4:-53605871 | MsG0480021109.01.T01:three_prime_UTR |
| TTCGCAAATTCAAGCTATGA+CGG | 0.607036 | 4:-53606029 | MsG0480021109.01.T01:three_prime_UTR |
| CGAGCTAACTCGATCGCCAA+CGG | 0.607861 | 4:+53607043 | None:intergenic |
| AGGACATGCTACAGTTGAAG+AGG | 0.610205 | 4:-53607348 | MsG0480021109.01.T01:intron |
| ATAACCAAATATATTAGAGA+TGG | 0.610891 | 4:-53605650 | MsG0480021109.01.T01:three_prime_UTR |
| TTGTTGCATCCAATTGGTCA+CGG | 0.613442 | 4:-53607582 | MsG0480021109.01.T01:intron |
| TGATAGCACATTGAGACCGT+TGG | 0.613528 | 4:-53607059 | MsG0480021109.01.T01:CDS |
| TCATAGCTTGAATTTGCGAA+GGG | 0.614455 | 4:+53606032 | None:intergenic |
| GAGATTAGAAATGTTGGTCA+CGG | 0.614978 | 4:-53606300 | MsG0480021109.01.T01:CDS |
| CGGATAAAGAATTACAAGCA+TGG | 0.616013 | 4:-53606329 | MsG0480021109.01.T01:CDS |
| ATGATTGAGCAACAAATCAG+AGG | 0.621173 | 4:-53607368 | MsG0480021109.01.T01:CDS |
| AAAGATCCAAATGCCCCACA+TGG | 0.624536 | 4:-53606477 | MsG0480021109.01.T01:CDS |
| CCCCGATGTAATCCAAACAA+TGG | 0.629499 | 4:+53606209 | None:intergenic |
| TGAGTCAAGAACTGTTGAGT+CGG | 0.633371 | 4:-53606349 | MsG0480021109.01.T01:CDS |
| AGCTATTGAACTTACCAAGA+GGG | 0.635140 | 4:+53606569 | None:intergenic |
| TACATCGGGGCATCATGCTG+CGG | 0.637437 | 4:-53606196 | MsG0480021109.01.T01:CDS |
| TGGTGATTTGAATATGGCAG+AGG | 0.653960 | 4:-53607666 | MsG0480021109.01.T01:CDS |
| GTGACCAATTGGATGCAACA+AGG | 0.655202 | 4:+53607584 | None:intergenic |
| CCATTGTTTGGATTACATCG+GGG | 0.657108 | 4:-53606209 | MsG0480021109.01.T01:CDS |
| TTGGCGGAAAGCCAGAATGG+AGG | 0.667120 | 4:-53607012 | MsG0480021109.01.T01:CDS |
| GGTAGCCAGAGTCATGAGCA+AGG | 0.680144 | 4:+53606924 | None:intergenic |
| GTGACAAGAAAGACGAACCA+TGG | 0.691218 | 4:-53606278 | MsG0480021109.01.T01:CDS |
| AAGCTATTGAACTTACCAAG+AGG | 0.696886 | 4:+53606568 | None:intergenic |
| ACTTGACAAAATATCCAACA+CGG | 0.724220 | 4:+53606000 | None:intergenic |
| ATAAAGAATTACAAGCATGG+TGG | 0.729305 | 4:-53606326 | MsG0480021109.01.T01:CDS |
| ACAAGAAAGACGAACCATGG+TGG | 0.729803 | 4:-53606275 | MsG0480021109.01.T01:CDS |
| TATGACGGTGATGACCGTGT+TGG | 0.742214 | 4:-53606014 | MsG0480021109.01.T01:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAATAAAAAAATAAAAAA+AGG | + | Chr4:53605748-53605767 | None:intergenic | 0.0% |
| !!! | TATAATGTTAAATAAAGTTT+TGG | - | Chr4:53607608-53607627 | MsG0480021109.01.T01:CDS | 10.0% |
| !! | AAAATAAAAAAAGGTAACAT+AGG | + | Chr4:53605739-53605758 | None:intergenic | 15.0% |
| !! | TAGTATACTTTCAAATAAAT+TGG | + | Chr4:53605778-53605797 | None:intergenic | 15.0% |
| !!! | ATGATTTTATTTTTTTGACT+TGG | + | Chr4:53606469-53606488 | None:intergenic | 15.0% |
| !! | AAATGAAACAATTCAATTAC+AGG | - | Chr4:53606078-53606097 | MsG0480021109.01.T01:CDS | 20.0% |
| !! | ACAAAAGTGAAAATCAATTA+AGG | + | Chr4:53606503-53606522 | None:intergenic | 20.0% |
| !! | ATAACCAAATATATTAGAGA+TGG | - | Chr4:53607634-53607653 | MsG0480021109.01.T01:CDS | 20.0% |
| !! | ATAGTGTACCATTAAATAAA+GGG | + | Chr4:53606019-53606038 | None:intergenic | 20.0% |
| !! | TATAGTGTACCATTAAATAA+AGG | + | Chr4:53606020-53606039 | None:intergenic | 20.0% |
| !!! | AAGAGGTATGTTTTTATTTA+AGG | - | Chr4:53605953-53605972 | MsG0480021109.01.T01:three_prime_UTR | 20.0% |
| !!! | AATCTTCTATTGTTAGTTTT+AGG | + | Chr4:53606833-53606852 | None:intergenic | 20.0% |
| !!! | AGAGGTATGTTTTTATTTAA+GGG | - | Chr4:53605954-53605973 | MsG0480021109.01.T01:three_prime_UTR | 20.0% |
| !!! | TCATCATTTGTTTTCAAATT+AGG | + | Chr4:53607035-53607054 | None:intergenic | 20.0% |
| ! | AAACTTGACCCTAAAATTTA+TGG | - | Chr4:53605865-53605884 | MsG0480021109.01.T01:three_prime_UTR | 25.0% |
| ! | AGAAAAAATCATAGTAGTCT+AGG | + | Chr4:53606129-53606148 | None:intergenic | 25.0% |
| !! | AAGTTGGATTGGATATAATT+TGG | + | Chr4:53607665-53607684 | None:intergenic | 25.0% |
| !! | TAGCATTTCCCTTTATTTAA+TGG | - | Chr4:53606008-53606027 | MsG0480021109.01.T01:three_prime_UTR | 25.0% |
| !!! | AAATGATGGTCTTATTCTTT+GGG | - | Chr4:53606863-53606882 | MsG0480021109.01.T01:intron | 25.0% |
| !!! | ATTGATTTTCACTTTTGTTC+AGG | - | Chr4:53606505-53606524 | MsG0480021109.01.T01:CDS | 25.0% |
| !!! | CTGCTTTTGAAAAGTTTAAA+GGG | - | Chr4:53607377-53607396 | MsG0480021109.01.T01:CDS | 25.0% |
| ACTTGACAAAATATCCAACA+CGG | + | Chr4:53607287-53607306 | None:intergenic | 30.0% | |
| ATAAAGAATTACAAGCATGG+TGG | - | Chr4:53606958-53606977 | MsG0480021109.01.T01:CDS | 30.0% | |
| ATAAGACCATCATTTGCATA+AGG | + | Chr4:53606858-53606877 | None:intergenic | 30.0% | |
| ATGAAGTTCAGGAATAGAAA+TGG | - | Chr4:53607444-53607463 | MsG0480021109.01.T01:intron | 30.0% | |
| CAATAGCTTATGATAAGCAT+TGG | - | Chr4:53606730-53606749 | MsG0480021109.01.T01:CDS | 30.0% | |
| CACACCATCTCTAATATATT+TGG | + | Chr4:53607641-53607660 | None:intergenic | 30.0% | |
| TAAGACCATCATTTGCATAA+GGG | + | Chr4:53606857-53606876 | None:intergenic | 30.0% | |
| TATGAAAGAATAAACCGTCT+TGG | - | Chr4:53606403-53606422 | MsG0480021109.01.T01:CDS | 30.0% | |
| TGGTATGAGATTAGAAATGT+TGG | - | Chr4:53606978-53606997 | MsG0480021109.01.T01:CDS | 30.0% | |
| TTGACTCATTGTTATAGTAG+TGG | + | Chr4:53606923-53606942 | None:intergenic | 30.0% | |
| TTGGGATACTATCAAATCTT+GGG | - | Chr4:53606881-53606900 | MsG0480021109.01.T01:intron | 30.0% | |
| ! | CTGTTTGTTGCTATAATGTA+AGG | + | Chr4:53606555-53606574 | None:intergenic | 30.0% |
| ! | GGAAGTAATAGTTTGTAGAT+TGG | + | Chr4:53606597-53606616 | None:intergenic | 30.0% |
| ! | GTACAACTTCTTCTGTTTTA+TGG | + | Chr4:53606104-53606123 | None:intergenic | 30.0% |
| ! | TCAAAAGCAGCTTTAATCAT+TGG | + | Chr4:53607367-53607386 | None:intergenic | 30.0% |
| ! | TCCACATTTTAGATACACAA+TGG | - | Chr4:53606614-53606633 | MsG0480021109.01.T01:CDS | 30.0% |
| ! | TCCATTGTGTATCTAAAATG+TGG | + | Chr4:53606618-53606637 | None:intergenic | 30.0% |
| ! | TGGATATTTTCCTAATAGAC+CGG | - | Chr4:53607136-53607155 | MsG0480021109.01.T01:CDS | 30.0% |
| ! | TTGAAGGTATAATAGATGAG+AGG | - | Chr4:53607413-53607432 | MsG0480021109.01.T01:CDS | 30.0% |
| ! | TTTGGGATACTATCAAATCT+TGG | - | Chr4:53606880-53606899 | MsG0480021109.01.T01:intron | 30.0% |
| !! | CAAATGATGGTCTTATTCTT+TGG | - | Chr4:53606862-53606881 | MsG0480021109.01.T01:intron | 30.0% |
| !! | CTTTTGAAAAGTTTAAAGGG+AGG | - | Chr4:53607380-53607399 | MsG0480021109.01.T01:CDS | 30.0% |
| !!! | CAAAATTTTTTGTGTCGTGT+AGG | - | Chr4:53605825-53605844 | MsG0480021109.01.T01:three_prime_UTR | 30.0% |
| !!! | GCTGCTTTTGAAAAGTTTAA+AGG | - | Chr4:53607376-53607395 | MsG0480021109.01.T01:CDS | 30.0% |
| AAAGTTTAAAGGGAGGTTGA+TGG | - | Chr4:53607387-53607406 | MsG0480021109.01.T01:CDS | 35.0% | |
| AAATAGTGACGACCATTGTT+TGG | - | Chr4:53607063-53607082 | MsG0480021109.01.T01:CDS | 35.0% | |
| AAGCTATTGAACTTACCAAG+AGG | + | Chr4:53606719-53606738 | None:intergenic | 35.0% | |
| ACCATTGTTTGGATTACATC+GGG | - | Chr4:53607074-53607093 | MsG0480021109.01.T01:CDS | 35.0% | |
| AGCTATTGAACTTACCAAGA+GGG | + | Chr4:53606718-53606737 | None:intergenic | 35.0% | |
| AGGAATGCTATATGAAGTTC+AGG | - | Chr4:53607433-53607452 | MsG0480021109.01.T01:CDS | 35.0% | |
| ATGATTGAGCAACAAATCAG+AGG | - | Chr4:53605916-53605935 | MsG0480021109.01.T01:three_prime_UTR | 35.0% | |
| CGGATAAAGAATTACAAGCA+TGG | - | Chr4:53606955-53606974 | MsG0480021109.01.T01:CDS | 35.0% | |
| GACCATTGTTTGGATTACAT+CGG | - | Chr4:53607073-53607092 | MsG0480021109.01.T01:CDS | 35.0% | |
| GAGATTAGAAATGTTGGTCA+CGG | - | Chr4:53606984-53607003 | MsG0480021109.01.T01:CDS | 35.0% | |
| GATTACCCTTATGCAAATGA+TGG | - | Chr4:53606849-53606868 | MsG0480021109.01.T01:intron | 35.0% | |
| GCACAACATTATATGGATCA+AGG | - | Chr4:53606182-53606201 | MsG0480021109.01.T01:CDS | 35.0% | |
| TAATCCTTGTTGCATCCAAT+TGG | - | Chr4:53605696-53605715 | MsG0480021109.01.T01:three_prime_UTR | 35.0% | |
| TCATAGCTTGAATTTGCGAA+GGG | + | Chr4:53607255-53607274 | None:intergenic | 35.0% | |
| TGGTTTAGGGATGAAGAATT+TGG | - | Chr4:53605652-53605671 | MsG0480021109.01.T01:three_prime_UTR | 35.0% | |
| TTCGCAAATTCAAGCTATGA+CGG | - | Chr4:53607255-53607274 | MsG0480021109.01.T01:intron | 35.0% | |
| TTGTTGCTCAATCATTTCAG+TGG | + | Chr4:53605911-53605930 | None:intergenic | 35.0% | |
| ! | CAGCAGGACCATAAATTTTA+GGG | + | Chr4:53605876-53605895 | None:intergenic | 35.0% |
| ! | CTTGAAGGCACAACATTATA+TGG | - | Chr4:53606175-53606194 | MsG0480021109.01.T01:CDS | 35.0% |
| ! | GAAGCACTTATAAATGCAGA+TGG | - | Chr4:53606657-53606676 | MsG0480021109.01.T01:CDS | 35.0% |
| ! | TATTTTGTCAAGTCATTCGC+CGG | - | Chr4:53607294-53607313 | MsG0480021109.01.T01:intron | 35.0% |
| ! | TCAGCAGGACCATAAATTTT+AGG | + | Chr4:53605877-53605896 | None:intergenic | 35.0% |
| ! | TCTATTTGAGACACATGTTG+TGG | - | Chr4:53607545-53607564 | MsG0480021109.01.T01:intron | 35.0% |
| !! | ATGGATTAGGTCATTTGGAA+GGG | + | Chr4:53606772-53606791 | None:intergenic | 35.0% |
| !! | GGGAACTTTTCTTTGAGAAA+CGG | - | Chr4:53607207-53607226 | MsG0480021109.01.T01:intron | 35.0% |
| !! | TATGGATTAGGTCATTTGGA+AGG | + | Chr4:53606773-53606792 | None:intergenic | 35.0% |
| !!! | AGGACAGATTCTTTTGGTTT+AGG | - | Chr4:53605638-53605657 | MsG0480021109.01.T01:three_prime_UTR | 35.0% |
| !!! | ATTGTTAGTTTTAGGCCATG+TGG | + | Chr4:53606825-53606844 | None:intergenic | 35.0% |
| !!! | CTATGATTTTTTCTTGCCGT+TGG | - | Chr4:53606135-53606154 | MsG0480021109.01.T01:CDS | 35.0% |
| !!! | GGACAGATTCTTTTGGTTTA+GGG | - | Chr4:53605639-53605658 | MsG0480021109.01.T01:three_prime_UTR | 35.0% |
| !!! | TTGTTAGTTTTAGGCCATGT+GGG | + | Chr4:53606824-53606843 | None:intergenic | 35.0% |
| !!! | TTTTTTGTGTCGTGTAGGAA+TGG | - | Chr4:53605830-53605849 | MsG0480021109.01.T01:three_prime_UTR | 35.0% |
| AGTAGTATACCGTGACCAAT+TGG | + | Chr4:53605714-53605733 | None:intergenic | 40.0% | |
| CCAAATGACCTAATCCATAG+AGG | - | Chr4:53606774-53606793 | MsG0480021109.01.T01:intron | 40.0% | |
| CCATTGTTTGGATTACATCG+GGG | - | Chr4:53607075-53607094 | MsG0480021109.01.T01:CDS | 40.0% | |
| GAGGAAGTCAGAAAACTTGA+AGG | - | Chr4:53606160-53606179 | MsG0480021109.01.T01:CDS | 40.0% | |
| GTCATAGCTTGAATTTGCGA+AGG | + | Chr4:53607256-53607275 | None:intergenic | 40.0% | |
| TATCGAATCGAAAGCCAAGA+CGG | + | Chr4:53606420-53606439 | None:intergenic | 40.0% | |
| TCTCCAAGATATTCCTCATC+CGG | + | Chr4:53607316-53607335 | None:intergenic | 40.0% | |
| TGAGTCAAGAACTGTTGAGT+CGG | - | Chr4:53606935-53606954 | MsG0480021109.01.T01:CDS | 40.0% | |
| TGCTATAATGTAAGGCTCTG+TGG | + | Chr4:53606547-53606566 | None:intergenic | 40.0% | |
| TGGTGATTTGAATATGGCAG+AGG | - | Chr4:53605618-53605637 | MsG0480021109.01.T01:three_prime_UTR | 40.0% | |
| TTCAGGAATAGAAATGGTGC+TGG | - | Chr4:53607450-53607469 | MsG0480021109.01.T01:intron | 40.0% | |
| TTGTTGCATCCAATTGGTCA+CGG | - | Chr4:53605702-53605721 | MsG0480021109.01.T01:three_prime_UTR | 40.0% | |
| TTTGGAAGACAGACTATAGC+AGG | - | Chr4:53605670-53605689 | MsG0480021109.01.T01:three_prime_UTR | 40.0% | |
| TTTGGTCAGTATACTTACGC+TGG | - | Chr4:53607116-53607135 | MsG0480021109.01.T01:CDS | 40.0% | |
| ! | ACCAGTGACTAACAAGTTGA+TGG | + | Chr4:53606384-53606403 | None:intergenic | 40.0% |
| ! | CTTTTTCTGCTAGTCCTCTA+TGG | + | Chr4:53606791-53606810 | None:intergenic | 40.0% |
| ! | GTTGGCTTCAAAAGCTCATA+AGG | + | Chr4:53607483-53607502 | None:intergenic | 40.0% |
| ! | GTTTTCAAATTAGGCCACCA+TGG | + | Chr4:53607026-53607045 | None:intergenic | 40.0% |
| !! | ACCATCAACTTGTTAGTCAC+TGG | - | Chr4:53606380-53606399 | MsG0480021109.01.T01:CDS | 40.0% |
| !! | CCTCTATGGATTAGGTCATT+TGG | + | Chr4:53606777-53606796 | None:intergenic | 40.0% |
| !! | GGGTCAAGTTTGCTTTTCAA+TGG | + | Chr4:53605856-53605875 | None:intergenic | 40.0% |
| !!! | TGTTAGTTTTAGGCCATGTG+GGG | + | Chr4:53606823-53606842 | None:intergenic | 40.0% |
| AAAGATCCAAATGCCCCACA+TGG | - | Chr4:53606807-53606826 | MsG0480021109.01.T01:intron | 45.0% | |
| ACAAGAAAGACGAACCATGG+TGG | - | Chr4:53607009-53607028 | MsG0480021109.01.T01:CDS | 45.0% | |
| ACCAAGAGGGAGAGTTGTTT+GGG | + | Chr4:53606705-53606724 | None:intergenic | 45.0% | |
| ACGGTCTCAATGTGCTATCA+TGG | + | Chr4:53606225-53606244 | None:intergenic | 45.0% | |
| AGGACATGCTACAGTTGAAG+AGG | - | Chr4:53605936-53605955 | MsG0480021109.01.T01:three_prime_UTR | 45.0% | |
| ATGAGCAAGGACATGAGCTT+TGG | + | Chr4:53606350-53606369 | None:intergenic | 45.0% | |
| CCCCGATGTAATCCAAACAA+TGG | + | Chr4:53607078-53607097 | None:intergenic | 45.0% | |
| CTGCTAGTCCTCTATGGATT+AGG | + | Chr4:53606785-53606804 | None:intergenic | 45.0% | |
| GGCAAGTCTTTACACCTACT+TGG | - | Chr4:53606293-53606312 | MsG0480021109.01.T01:CDS | 45.0% | |
| GTAAAGACTTGCCTCCATTC+TGG | + | Chr4:53606286-53606305 | None:intergenic | 45.0% | |
| GTGACAAGAAAGACGAACCA+TGG | - | Chr4:53607006-53607025 | MsG0480021109.01.T01:CDS | 45.0% | |
| GTGACCAATTGGATGCAACA+AGG | + | Chr4:53605703-53605722 | None:intergenic | 45.0% | |
| TACCAAGAGGGAGAGTTGTT+TGG | + | Chr4:53606706-53606725 | None:intergenic | 45.0% | |
| TCATGCTAACTAGTGCGTCT+GGG | - | Chr4:53605977-53605996 | MsG0480021109.01.T01:three_prime_UTR | 45.0% | |
| TCTTGGAGAAACGATTGAGC+CGG | - | Chr4:53607327-53607346 | MsG0480021109.01.T01:intron | 45.0% | |
| TGATAGCACATTGAGACCGT+TGG | - | Chr4:53606225-53606244 | MsG0480021109.01.T01:CDS | 45.0% | |
| TTTCTGACTTCCTCGACCAA+CGG | + | Chr4:53606154-53606173 | None:intergenic | 45.0% | |
| ! | ACACCTTTTCCTGTTACACC+AGG | + | Chr4:53607513-53607532 | None:intergenic | 45.0% |
| ! | ACTCAACTGGTGTTTGGCTT+TGG | - | Chr4:53606317-53606336 | MsG0480021109.01.T01:CDS | 45.0% |
| ! | CATCATGCTGCGGTGAATTT+TGG | - | Chr4:53607098-53607117 | MsG0480021109.01.T01:CDS | 45.0% |
| ! | TGGCAGAGGACAGATTCTTT+TGG | - | Chr4:53605632-53605651 | MsG0480021109.01.T01:three_prime_UTR | 45.0% |
| !! | AGGCATGTTGTTTCGTGCAA+TGG | + | Chr4:53607162-53607181 | None:intergenic | 45.0% |
| !! | ATGTTGTTTCGTGCAATGGC+CGG | + | Chr4:53607158-53607177 | None:intergenic | 45.0% |
| !!! | TTTTTTCTTGCCGTTGGTCG+AGG | - | Chr4:53606141-53606160 | MsG0480021109.01.T01:CDS | 45.0% |
| ACACCAGTTGAGTGCCAAGT+AGG | + | Chr4:53606310-53606329 | None:intergenic | 50.0% | |
| ACACCTACTTGGCACTCAAC+TGG | - | Chr4:53606304-53606323 | MsG0480021109.01.T01:CDS | 50.0% | |
| ACATCAGAGCCTGGTGTAAC+AGG | - | Chr4:53607501-53607520 | MsG0480021109.01.T01:intron | 50.0% | |
| CAATTGGCGGAAAGCCAGAA+TGG | - | Chr4:53606269-53606288 | MsG0480021109.01.T01:CDS | 50.0% | |
| CATGCCTACAGAAGACCCTT+CGG | - | Chr4:53607175-53607194 | MsG0480021109.01.T01:CDS | 50.0% | |
| CATGTCCTTGCTCATGACTC+TGG | - | Chr4:53606355-53606374 | MsG0480021109.01.T01:CDS | 50.0% | |
| CTTGGCACTCAACTGGTGTT+TGG | - | Chr4:53606311-53606330 | MsG0480021109.01.T01:CDS | 50.0% | |
| GAGCCTGGTGTAACAGGAAA+AGG | - | Chr4:53607507-53607526 | MsG0480021109.01.T01:intron | 50.0% | |
| GTCATGCTAACTAGTGCGTC+TGG | - | Chr4:53605976-53605995 | MsG0480021109.01.T01:three_prime_UTR | 50.0% | |
| TATGACGGTGATGACCGTGT+TGG | - | Chr4:53607270-53607289 | MsG0480021109.01.T01:intron | 50.0% | |
| TCCCAAACAACTCTCCCTCT+TGG | - | Chr4:53606701-53606720 | MsG0480021109.01.T01:CDS | 50.0% | |
| TCGCCGGATGAGGAATATCT+TGG | - | Chr4:53607310-53607329 | MsG0480021109.01.T01:intron | 50.0% | |
| TTGAAGCCAACATCAGAGCC+TGG | - | Chr4:53607492-53607511 | MsG0480021109.01.T01:intron | 50.0% | |
| ! | ATTGGTTCCTCTTGCCAAGC+CGG | + | Chr4:53607349-53607368 | None:intergenic | 50.0% |
| ! | GTTACACCAGGCTCTGATGT+TGG | + | Chr4:53607501-53607520 | None:intergenic | 50.0% |
| ! | TTTAGGCCATGTGGGGCATT+TGG | + | Chr4:53606816-53606835 | None:intergenic | 50.0% |
| !! | CAACTGGTGTTTGGCTTTGG+AGG | - | Chr4:53606320-53606339 | MsG0480021109.01.T01:CDS | 50.0% |
| !! | CATTCTGGCTTTCCGCCAAT+TGG | + | Chr4:53606271-53606290 | None:intergenic | 50.0% |
| !! | GTGGTTATTGCTGACTCAGC+AGG | + | Chr4:53605892-53605911 | None:intergenic | 50.0% |
| AAGACCCTTCGGACAGCGAA+TGG | - | Chr4:53607186-53607205 | MsG0480021109.01.T01:CDS | 55.0% | |
| AGACCCTTCGGACAGCGAAT+GGG | - | Chr4:53607187-53607206 | MsG0480021109.01.T01:CDS | 55.0% | |
| AGTTCCCATTCGCTGTCCGA+AGG | + | Chr4:53607194-53607213 | None:intergenic | 55.0% | |
| CGAGCTAACTCGATCGCCAA+CGG | + | Chr4:53606244-53606263 | None:intergenic | 55.0% | |
| CGTGCAATGGCCGGTCTATT+AGG | + | Chr4:53607149-53607168 | None:intergenic | 55.0% | |
| CGTTGGCGATCGAGTTAGCT+CGG | - | Chr4:53606242-53606261 | MsG0480021109.01.T01:CDS | 55.0% | |
| CTGTCCGAAGGGTCTTCTGT+AGG | + | Chr4:53607182-53607201 | None:intergenic | 55.0% | |
| GAGAAACGATTGAGCCGGCT+TGG | - | Chr4:53607332-53607351 | MsG0480021109.01.T01:intron | 55.0% | |
| GGTAGCCAGAGTCATGAGCA+AGG | + | Chr4:53606363-53606382 | None:intergenic | 55.0% | |
| GTCAAGTCATTCGCCGGATG+AGG | - | Chr4:53607300-53607319 | MsG0480021109.01.T01:intron | 55.0% | |
| GTTCCCATTCGCTGTCCGAA+GGG | + | Chr4:53607193-53607212 | None:intergenic | 55.0% | |
| TTGGCGGAAAGCCAGAATGG+AGG | - | Chr4:53606272-53606291 | MsG0480021109.01.T01:CDS | 55.0% | |
| ! | AACTAGTGCGTCTGGGACAC+TGG | - | Chr4:53605984-53606003 | MsG0480021109.01.T01:three_prime_UTR | 55.0% |
| ! | TACATCGGGGCATCATGCTG+CGG | - | Chr4:53607088-53607107 | MsG0480021109.01.T01:CDS | 55.0% |
| !! | GGGAGGTTGATGGAGCTTGA+AGG | - | Chr4:53607397-53607416 | MsG0480021109.01.T01:CDS | 55.0% |
| !! | TCTGGCTTTCCGCCAATTGG+CGG | + | Chr4:53606268-53606287 | None:intergenic | 55.0% |
| GAGTTAGCTCGGCCGCCAAT+TGG | - | Chr4:53606253-53606272 | MsG0480021109.01.T01:CDS | 60.0% | |
| TTAGCTCGGCCGCCAATTGG+CGG | - | Chr4:53606256-53606275 | MsG0480021109.01.T01:CDS | 60.0% | |
| !! | GATTGAGCCGGCTTGGCAAG+AGG | - | Chr4:53607339-53607358 | MsG0480021109.01.T01:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr4 | gene | 53605613 | 53607693 | 53605613 | ID=MsG0480021109.01;Name=MsG0480021109.01 |
| Chr4 | mRNA | 53605613 | 53607693 | 53605613 | ID=MsG0480021109.01.T01;Parent=MsG0480021109.01;Name=MsG0480021109.01.T01;_AED=0.43;_eAED=0.44;_QI=0|1|0.75|1|1|1|4|458|410 |
| Chr4 | exon | 53605613 | 53606779 | 53605613 | ID=MsG0480021109.01.T01:exon:28696;Parent=MsG0480021109.01.T01 |
| Chr4 | exon | 53606905 | 53607206 | 53606905 | ID=MsG0480021109.01.T01:exon:28695;Parent=MsG0480021109.01.T01 |
| Chr4 | exon | 53607349 | 53607459 | 53607349 | ID=MsG0480021109.01.T01:exon:28694;Parent=MsG0480021109.01.T01 |
| Chr4 | exon | 53607583 | 53607693 | 53607583 | ID=MsG0480021109.01.T01:exon:28693;Parent=MsG0480021109.01.T01 |
| Chr4 | CDS | 53607583 | 53607693 | 53607583 | ID=MsG0480021109.01.T01:cds;Parent=MsG0480021109.01.T01 |
| Chr4 | CDS | 53607349 | 53607459 | 53607349 | ID=MsG0480021109.01.T01:cds;Parent=MsG0480021109.01.T01 |
| Chr4 | CDS | 53606905 | 53607206 | 53606905 | ID=MsG0480021109.01.T01:cds;Parent=MsG0480021109.01.T01 |
| Chr4 | CDS | 53606071 | 53606779 | 53606071 | ID=MsG0480021109.01.T01:cds;Parent=MsG0480021109.01.T01 |
| Chr4 | three_prime_UTR | 53605613 | 53606070 | 53605613 | ID=MsG0480021109.01.T01:three_prime_utr;Parent=MsG0480021109.01.T01 |
| Chr4 | mRNA | 53605656 | 53606026 | 53605656 | ID=MsG0480021109.01.T02;Parent=MsG0480021109.01;Name=MsG0480021109.01.T02;_AED=0.49;_eAED=0.70;_QI=0|0|0|1|1|1|2|0|93 |
| Chr4 | exon | 53605888 | 53606026 | 53605888 | ID=MsG0480021109.01.T02:exon:28698;Parent=MsG0480021109.01.T02 |
| Chr4 | exon | 53605656 | 53605798 | 53605656 | ID=MsG0480021109.01.T02:exon:28697;Parent=MsG0480021109.01.T02 |
| Chr4 | CDS | 53605888 | 53606026 | 53605888 | ID=MsG0480021109.01.T02:cds;Parent=MsG0480021109.01.T02 |
| Chr4 | CDS | 53605656 | 53605798 | 53605656 | ID=MsG0480021109.01.T02:cds;Parent=MsG0480021109.01.T02 |
| Gene Sequence |
| Protein sequence |
