AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880042895.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880042895.01.T01 MTR_8g024340 93.344 616 11 1 1 586 1 616 0.0 1181
MsG0880042895.01.T01 MTR_1g078000 69.497 577 142 3 41 586 35 608 0.0 801
MsG0880042895.01.T01 MTR_6g012380 40.927 496 259 10 90 560 267 753 1.27e-113 356
MsG0880042895.01.T01 MTR_3g091570 39.163 526 256 13 83 558 134 645 2.70e-110 344
MsG0880042895.01.T01 MTR_3g091570 37.552 482 237 12 127 558 1 468 5.47e-94 296
MsG0880042895.01.T01 MTR_4g094595 30.273 512 291 18 89 559 490 976 8.90e-53 194
MsG0880042895.01.T01 MTR_2g023320 30.078 512 246 17 90 557 474 917 2.87e-49 184
MsG0880042895.01.T01 MTR_2g023320 29.331 508 255 15 90 557 658 1101 3.39e-49 184
MsG0880042895.01.T01 MTR_5g030600 22.449 490 330 17 89 549 190 658 8.12e-19 90.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880042895.01.T01 AT1G32900 67.152 618 163 6 1 586 1 610 0.0 798
MsG0880042895.01.T01 AT3G01180 42.000 500 248 9 90 560 301 787 1.98e-115 362
MsG0880042895.01.T01 AT5G24300 38.580 521 265 12 81 558 133 641 5.27e-106 333
MsG0880042895.01.T01 AT5G24300 38.580 521 265 12 81 558 133 641 5.27e-106 333
MsG0880042895.01.T01 AT4G18240 29.559 521 279 18 89 557 541 1025 8.87e-52 192
MsG0880042895.01.T01 AT1G11720 28.343 501 274 13 90 560 594 1039 3.35e-51 190
MsG0880042895.01.T01 AT1G11720 28.343 501 274 13 90 560 646 1091 3.48e-51 190

Find 168 sgRNAs with CRISPR-Local

Find 316 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAACATCCTCCTTAATAAAT+TGG 0.148032 8:-15585942 None:intergenic
TAAAATAAAACTTGCTTAAA+TGG 0.149440 8:-15582852 None:intergenic
TCCAATTCCACTCCTTTATC+TGG 0.155027 8:-15585517 None:intergenic
TTTCACCAATTATATCATTT+TGG 0.199444 8:-15587743 None:intergenic
TAAGGCATCAAATTTGAAAT+TGG 0.221838 8:-15582738 None:intergenic
AGCCATTCCCCAATTTATTA+AGG 0.277974 8:+15585933 MsG0880042895.01.T01:CDS
CTTCGCCGAACTGGTGTTAC+TGG 0.300119 8:+15585547 MsG0880042895.01.T01:CDS
AACATCCTCCTTAATAAATT+GGG 0.300262 8:-15585941 None:intergenic
TCTAGCCAAAATGATATAAT+TGG 0.311718 8:+15587738 MsG0880042895.01.T01:three_prime_UTR
GGAGGAAGTGCTGCTAAGTT+TGG 0.312861 8:+15587259 MsG0880042895.01.T01:CDS
CTGCTAAGTTTGGGAGTTCC+TGG 0.315078 8:+15587269 MsG0880042895.01.T01:CDS
AAGCAACACAATAATATTTC+AGG 0.322726 8:+15582623 MsG0880042895.01.T01:five_prime_UTR
ACAAAGGCCCTTGCAGTCTA+TGG 0.324992 8:+15586762 MsG0880042895.01.T01:CDS
GAACATAATCTATCATTCTT+AGG 0.327989 8:-15587508 None:intergenic
AGCTCATTCGACTTCATAGA+TGG 0.344129 8:+15585294 MsG0880042895.01.T01:CDS
TGGAGCAAAACTGGTGGTTT+AGG 0.348494 8:+15583547 MsG0880042895.01.T01:CDS
ACCAGCCAAATGGCATATTT+AGG 0.351605 8:+15585047 MsG0880042895.01.T01:CDS
CTCAATCTCTTGAAGGTTCA+TGG 0.355476 8:+15587393 MsG0880042895.01.T01:three_prime_UTR
GTTGAACTAATTAAGCTTCA+AGG 0.357647 8:-15582665 None:intergenic
TTTATCACTCTCTAGGCTAA+TGG 0.363828 8:+15584017 MsG0880042895.01.T01:intron
TCTGAGTCCATTATGTGTAT+TGG 0.365017 8:-15583368 None:intergenic
TGCTAGTCTCAATCTCTTGA+AGG 0.366692 8:+15587386 MsG0880042895.01.T01:three_prime_UTR
CCAAGCAGAAGTTGGATTGC+CGG 0.369816 8:+15585837 MsG0880042895.01.T01:CDS
GGTAGACTTGAAGAGCAAAA+AGG 0.369948 8:+15585892 MsG0880042895.01.T01:CDS
TTACATCTTTGTTCTAATCA+TGG 0.371499 8:-15587353 None:intergenic
GCATGGCTCAAGATCTTTCA+TGG 0.373044 8:+15586817 MsG0880042895.01.T01:CDS
ACTAGTTCTTGAGCATAGTA+TGG 0.376634 8:-15585487 None:intergenic
ATACACAGGTTTAAATTCCT+TGG 0.380334 8:-15587456 None:intergenic
ATTCCTCTCATTGCTTTCAT+TGG 0.382733 8:+15585871 MsG0880042895.01.T01:CDS
CCCAGATAAAGGAGTGGAAT+TGG 0.385440 8:+15585516 MsG0880042895.01.T01:CDS
TTGATCATTTCTGCAAAAGT+TGG 0.386157 8:-15586789 None:intergenic
AGAAAAGCCAATACACATAA+TGG 0.386744 8:+15583361 MsG0880042895.01.T01:CDS
GGTGGTTTAGGAGATGTTCT+AGG 0.388108 8:+15583559 MsG0880042895.01.T01:CDS
ATTTCTTCTCCATCAATTCC+AGG 0.392626 8:-15587299 None:intergenic
TGAAATATTATTGTGTTGCT+TGG 0.403707 8:-15582621 None:intergenic
TATGCCATTTCTTAGGGAAC+AGG 0.404468 8:+15586071 MsG0880042895.01.T01:intron
GTACCAATTGTTGCCTCAAC+AGG 0.406492 8:+15586522 MsG0880042895.01.T01:CDS
GCATTCCTAAATATGCCATT+TGG 0.407931 8:-15585052 None:intergenic
ATAATCTTAACAGGCAGCTC+TGG 0.408448 8:+15584817 MsG0880042895.01.T01:intron
CCAATTCCACTCCTTTATCT+GGG 0.409765 8:-15585516 None:intergenic
GCAACTCCTCTAGCCTTGTC+AGG 0.409835 8:-15586140 None:intergenic
TTGAATATCGCCGTTTGAGC+CGG 0.409969 8:+15582905 MsG0880042895.01.T01:five_prime_UTR
GGCAGTGAACCTGGAATTGA+TGG 0.411509 8:+15587290 MsG0880042895.01.T01:CDS
GGAGTTCCTGGCAGTGAACC+TGG 0.416485 8:+15587281 MsG0880042895.01.T01:CDS
ATAATTGGTGAAAAGAAAGT+TGG 0.417837 8:+15587753 MsG0880042895.01.T01:three_prime_UTR
ATGATTAGAACAAAGATGTA+AGG 0.417900 8:+15587355 MsG0880042895.01.T01:exon
CTAGTGTCAGGCCCAGATAA+AGG 0.418565 8:+15585505 MsG0880042895.01.T01:CDS
CCACAAATTATAATACCTTT+CGG 0.419141 8:-15583487 None:intergenic
CTTGGAGTGCTTCTTTCAGA+AGG 0.419569 8:-15585819 None:intergenic
GGCATGAATTTGATCTTTGT+TGG 0.419673 8:+15583508 MsG0880042895.01.T01:CDS
CCGAAAGGTATTATAATTTG+TGG 0.422942 8:+15583487 MsG0880042895.01.T01:CDS
TGCCTCAACAGGTGGATTAG+TGG 0.426815 8:+15586533 MsG0880042895.01.T01:CDS
TCCCTGTGTGCTTCATTACC+TGG 0.428699 8:+15582695 MsG0880042895.01.T01:five_prime_UTR
TATCCCACGCATCTTTGTAT+TGG 0.430966 8:-15584073 None:intergenic
TCACCCTATATTTCTTGAAA+AGG 0.432618 8:+15584307 MsG0880042895.01.T01:CDS
TTCTTTCATTGCTTTAAAAG+AGG 0.435407 8:+15584263 MsG0880042895.01.T01:CDS
GGTGTTACTGGTATTGTAAA+TGG 0.437797 8:+15585559 MsG0880042895.01.T01:CDS
AGTAAGCTTACTGCTAATAC+TGG 0.437855 8:-15583592 None:intergenic
CCACAAGGCTCAAATCTACT+AGG 0.441652 8:-15586221 None:intergenic
TGAAACTTCAAATCTAAGTC+TGG 0.442577 8:+15583187 MsG0880042895.01.T01:five_prime_UTR
AAATATTTCTCAGGACCATA+TGG 0.444026 8:+15584872 MsG0880042895.01.T01:CDS
CGATCGGAGTGAGCAAGTTA+AGG 0.447693 8:-15587625 None:intergenic
TAATTAACACCACTAAACTT+TGG 0.448329 8:-15582775 None:intergenic
AGGGTTATACTGCTTATTCA+TGG 0.448759 8:-15587706 None:intergenic
CGCTGTGGATCCGGCTGATG+TGG 0.450888 8:+15586719 MsG0880042895.01.T01:CDS
CCACCTGTTGAGGCAACAAT+TGG 0.451085 8:-15586525 None:intergenic
TTAGCACACATGATAATTGC+AGG 0.452499 8:+15586179 MsG0880042895.01.T01:CDS
GTTGGTCCATGGAGCAAAAC+TGG 0.452504 8:+15583538 MsG0880042895.01.T01:CDS
TGCAATTATCATGTGTGCTA+AGG 0.453551 8:-15586177 None:intergenic
TTAAACCTGTGTATCTAACT+TGG 0.454001 8:+15587465 MsG0880042895.01.T01:three_prime_UTR
CTAATTTGTACAACTCGATC+CGG 0.457872 8:-15582924 None:intergenic
GAGGAAGTGCTGCTAAGTTT+GGG 0.458467 8:+15587260 MsG0880042895.01.T01:CDS
TTAGTGTGACGCTGTGGATC+CGG 0.458958 8:+15586710 MsG0880042895.01.T01:intron
ACTTATAATTACTCCATCAC+TGG 0.459353 8:-15587425 None:intergenic
TATTATTACTTCAACATTGA+AGG 0.465906 8:-15586595 None:intergenic
ACTTCCTCCCACTTCTTAGC+AGG 0.470539 8:-15587245 None:intergenic
TTTCAAGTAGCATGAGATAA+GGG 0.470650 8:-15585017 None:intergenic
CCAAGGCAGATTTGCATTCG+CGG 0.473556 8:+15585236 MsG0880042895.01.T01:CDS
GAGGGGATATAATGATAGAT+TGG 0.476083 8:-15587648 None:intergenic
CTCCTTAATAAATTGGGGAA+TGG 0.479356 8:-15585935 None:intergenic
GACAACATTCTTCGCCGAAC+TGG 0.480449 8:+15585538 MsG0880042895.01.T01:CDS
TGTTTATTACAGGTAAAAGT+AGG 0.480821 8:+15584218 MsG0880042895.01.T01:intron
GTTATGTATTTGTCAGTGGA+TGG 0.482006 8:-15585604 None:intergenic
ACAGTCAAAGAAGGTTTCAC+TGG 0.487245 8:+15586558 MsG0880042895.01.T01:CDS
AAAATCAACTGGATGAAAGC+TGG 0.487870 8:+15585430 MsG0880042895.01.T01:CDS
TTAGACTCACATGAGATAGT+TGG 0.490478 8:-15583310 None:intergenic
TAGAACTCCAATTAAAATGA+AGG 0.490575 8:+15583420 MsG0880042895.01.T01:CDS
ACGAGCAATAAATATTTCTC+AGG 0.491007 8:+15584863 MsG0880042895.01.T01:CDS
ATCTTTGTTGGAACTGAGGT+TGG 0.492697 8:+15583520 MsG0880042895.01.T01:CDS
AAATGAAGGCAGTGAAATCA+AGG 0.495094 8:+15583434 MsG0880042895.01.T01:CDS
TCAATTCCAGGTTCACTGCC+AGG 0.495114 8:-15587287 None:intergenic
AGGTTTCACTGGATTTCAGA+TGG 0.496834 8:+15586569 MsG0880042895.01.T01:CDS
AGTTAAGGAGTCGAGTGATA+AGG 0.498172 8:-15587610 None:intergenic
GCAGTGAAATCAAGGAGAAA+AGG 0.499059 8:+15583442 MsG0880042895.01.T01:CDS
AGGTATGTTAAACCAGTTGT+TGG 0.500872 8:+15585403 MsG0880042895.01.T01:intron
ACAACTCGATCCGGCTCAAA+CGG 0.504418 8:-15582915 None:intergenic
TTGGAGTGCTTCTTTCAGAA+GGG 0.511966 8:-15585818 None:intergenic
TCCTAAATATGCCATTTGGC+TGG 0.513729 8:-15585048 None:intergenic
CCTAGTAGATTTGAGCCTTG+TGG 0.515224 8:+15586221 MsG0880042895.01.T01:CDS
CCGGCAATCCAACTTCTGCT+TGG 0.516075 8:-15585837 None:intergenic
AAATCTATGTACCAGCCAAA+TGG 0.518875 8:+15585037 MsG0880042895.01.T01:CDS
GCAATTATCATGTGTGCTAA+GGG 0.520362 8:-15586176 None:intergenic
TGGAGAAGAAATTGCTCCAC+AGG 0.521835 8:+15587310 MsG0880042895.01.T01:CDS
GAAGCACTCCAAGCAGAAGT+TGG 0.523874 8:+15585829 MsG0880042895.01.T01:CDS
ATTTCAAGTAGCATGAGATA+AGG 0.525167 8:-15585018 None:intergenic
GCTATTGCATCCACATCAGC+CGG 0.525934 8:-15586729 None:intergenic
TTGGAACTGAGGTTGGTCCA+TGG 0.530234 8:+15583527 MsG0880042895.01.T01:CDS
AGAAATTGCTCCACAGGCAA+AGG 0.537424 8:+15587316 MsG0880042895.01.T01:CDS
CCGCGAATGCAAATCTGCCT+TGG 0.538259 8:-15585236 None:intergenic
CTCATAGAACCAAGTCTCAT+CGG 0.538517 8:-15583340 None:intergenic
CTATAATATACTAGCTAACC+AGG 0.539460 8:-15582713 None:intergenic
CAATACCAGTAACACCAGTT+CGG 0.539892 8:-15585552 None:intergenic
GGCAGCTCTGGAAGCAGCAA+GGG 0.542199 8:+15584829 MsG0880042895.01.T01:intron
TATGCTCAAGAACTAGTGTC+AGG 0.557035 8:+15585493 MsG0880042895.01.T01:CDS
TTTGGCTAGAATACAAGGAA+GGG 0.558702 8:-15587725 None:intergenic
CTTATAATTACTCCATCACT+GGG 0.560728 8:-15587424 None:intergenic
TTAGTGGACACAGTCAAAGA+AGG 0.561216 8:+15586549 MsG0880042895.01.T01:CDS
CCAATTGTTGCCTCAACAGG+TGG 0.561384 8:+15586525 MsG0880042895.01.T01:CDS
GGTTTCACTGGATTTCAGAT+GGG 0.561885 8:+15586570 MsG0880042895.01.T01:CDS
CATTCCCCAATTTATTAAGG+AGG 0.565255 8:+15585936 MsG0880042895.01.T01:CDS
ATGGAACTTCACCCCAGTGA+TGG 0.572735 8:+15587412 MsG0880042895.01.T01:three_prime_UTR
GGCTCAAGATCTTTCATGGA+AGG 0.575124 8:+15586821 MsG0880042895.01.T01:CDS
AAAACAGCACCGATGAGACT+TGG 0.575958 8:+15583331 MsG0880042895.01.T01:CDS
TTGGAGTTCCATAGACTGCA+AGG 0.578650 8:-15586770 None:intergenic
ACTTTCCAAGTTAGATACAC+AGG 0.578848 8:-15587470 None:intergenic
AACTTCAAATCTAAGTCTGG+TGG 0.578883 8:+15583190 MsG0880042895.01.T01:five_prime_UTR
ATTAGGGACCTGCTAAGAAG+TGG 0.580093 8:+15587237 MsG0880042895.01.T01:intron
CGTCGCTAATGATTGGCACA+CGG 0.584845 8:+15584994 MsG0880042895.01.T01:CDS
GGATACAAGTGTAACAATTG+AGG 0.586203 8:+15584091 MsG0880042895.01.T01:CDS
TACTGGTATTGTAAATGGCA+TGG 0.587387 8:+15585564 MsG0880042895.01.T01:CDS
AGAAAGAATGTTATGCCGAA+AGG 0.592828 8:+15583472 MsG0880042895.01.T01:CDS
GACAGTTATGTATTTGTCAG+TGG 0.592989 8:-15585608 None:intergenic
CAGCTACAAGCTATGCGCTA+CGG 0.593914 8:+15586251 MsG0880042895.01.T01:CDS
AAGCTTACTGCTAATACTGG+TGG 0.598496 8:-15583589 None:intergenic
TGCCTTGGTATGCAATGTTG+TGG 0.598925 8:-15585221 None:intergenic
GCTCATTCGACTTCATAGAT+GGG 0.599348 8:+15585295 MsG0880042895.01.T01:CDS
AGGCAGCTCTGGAAGCAGCA+AGG 0.600304 8:+15584828 MsG0880042895.01.T01:intron
TGATTAGAACAAAGATGTAA+GGG 0.602222 8:+15587356 MsG0880042895.01.T01:exon
ACATCCTCCTTAATAAATTG+GGG 0.602752 8:-15585940 None:intergenic
TCGTCTACTCAGGTATTGGA+AGG 0.602861 8:+15585790 MsG0880042895.01.T01:intron
TTTGATCTTTGTTGGAACTG+AGG 0.607065 8:+15583516 MsG0880042895.01.T01:CDS
TTGGTCATAACGTGGAGCGA+TGG 0.612220 8:-15584054 None:intergenic
TAAGGAGTCGAGTGATAAGG+AGG 0.617316 8:-15587607 None:intergenic
ATGACCAATACAAAGATGCG+TGG 0.624316 8:+15584069 MsG0880042895.01.T01:CDS
TTAGGGACCTGCTAAGAAGT+GGG 0.625550 8:+15587238 MsG0880042895.01.T01:intron
GTCCACTAATCCACCTGTTG+AGG 0.626982 8:-15586535 None:intergenic
ACCAGGTAATGAAGCACACA+GGG 0.629679 8:-15582696 None:intergenic
ATAATTTCACAAGTGATGAG+AGG 0.630741 8:+15583163 MsG0880042895.01.T01:intron
AGAAATGATCAAGAATTGCA+TGG 0.636503 8:+15586800 MsG0880042895.01.T01:CDS
ATGGCATGGATGTTCAAGAG+TGG 0.637982 8:+15585578 MsG0880042895.01.T01:CDS
TATAATGATAGATTGGCGAT+CGG 0.641233 8:-15587641 None:intergenic
TCATATCCTGACAAGGCTAG+AGG 0.641716 8:+15586134 MsG0880042895.01.T01:CDS
AACCAGGTAATGAAGCACAC+AGG 0.643692 8:-15582697 None:intergenic
TGACCAATACAAAGATGCGT+GGG 0.645410 8:+15584070 MsG0880042895.01.T01:CDS
TGAAATATCATATCCTGACA+AGG 0.646436 8:+15586127 MsG0880042895.01.T01:CDS
GGTTTAGGAGATGTTCTAGG+AGG 0.652378 8:+15583562 MsG0880042895.01.T01:CDS
TGGAGTTCCATAGACTGCAA+GGG 0.653724 8:-15586769 None:intergenic
CTACCAATGAAAGCAATGAG+AGG 0.658131 8:-15585874 None:intergenic
AGATAGTTGGTACATTGACA+TGG 0.665294 8:-15583297 None:intergenic
TCTTTGTATTGGTCATAACG+TGG 0.669620 8:-15584062 None:intergenic
GTCAGGCCCAGATAAAGGAG+TGG 0.669932 8:+15585510 MsG0880042895.01.T01:CDS
TGTAGCTGAATGAGACCACA+AGG 0.671420 8:-15586236 None:intergenic
GGTCCATGGAGCAAAACTGG+TGG 0.674393 8:+15583541 MsG0880042895.01.T01:CDS
AATAGCAAAGACTGTCACAA+AGG 0.677740 8:+15586746 MsG0880042895.01.T01:CDS
ATCCACAACATTGCATACCA+AGG 0.683894 8:+15585219 MsG0880042895.01.T01:CDS
ATGGACTAACAGTTAAAACC+CGG 0.694472 8:-15585468 None:intergenic
GGGACCTGCTAAGAAGTGGG+AGG 0.697968 8:+15587241 MsG0880042895.01.T01:intron
TTATAATTACTCCATCACTG+GGG 0.837604 8:-15587423 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AGTTTTGTATTTTTTTAAAA+CGG + Chr8:15587531-15587550 MsG0880042895.01.T01:three_prime_UTR 10.0%
!! TTGGTAAAAAATAAAGTTTA+AGG - Chr8:15582759-15582778 None:intergenic 15.0%
!! TTTAAGAAACAATAAGATAA+TGG - Chr8:15586683-15586702 None:intergenic 15.0%
!!! TAAAATAAAACTTGCTTAAA+TGG - Chr8:15582855-15582874 None:intergenic 15.0%
!!! TTATTTTTCAGTATAAAAGA+TGG + Chr8:15583225-15583244 MsG0880042895.01.T01:exon 15.0%
!! AAAACTGGAACAAAAATTTA+TGG + Chr8:15584418-15584437 MsG0880042895.01.T01:intron 20.0%
!! AAAATGACAAAGGAAAAATT+AGG - Chr8:15584784-15584803 None:intergenic 20.0%
!! ATAGTCATAAATGAAATTCT+TGG + Chr8:15584903-15584922 MsG0880042895.01.T01:intron 20.0%
!! CATCATTATTATACTTACTA+GGG - Chr8:15585977-15585996 None:intergenic 20.0%
!! TACAAAAAACAACCTAATAA+TGG - Chr8:15585200-15585219 None:intergenic 20.0%
!! TATTATTACTTCAACATTGA+AGG - Chr8:15586598-15586617 None:intergenic 20.0%
!! TTAATCTAACAATTGACATT+TGG - Chr8:15582995-15583014 None:intergenic 20.0%
!! TTAATGATGATTGAATTTGA+AGG + Chr8:15584387-15584406 MsG0880042895.01.T01:intron 20.0%
!!! TATTTTTTACCAAAGTTTAG+TGG + Chr8:15582766-15582785 MsG0880042895.01.T01:five_prime_UTR 20.0%
!!! TTTCACCAATTATATCATTT+TGG - Chr8:15587746-15587765 None:intergenic 20.0%
! AAATGTGAGACAAATTATTG+AGG - Chr8:15586488-15586507 None:intergenic 25.0%
! AACATCCTCCTTAATAAATT+GGG - Chr8:15585944-15585963 None:intergenic 25.0%
! AAGAATACAAAAATGAACGA+GGG - Chr8:15587669-15587688 None:intergenic 25.0%
! AAGCAACACAATAATATTTC+AGG + Chr8:15582623-15582642 MsG0880042895.01.T01:five_prime_UTR 25.0%
! AATTTGAGCTATAGAGAATT+TGG + Chr8:15583114-15583133 MsG0880042895.01.T01:intron 25.0%
! ATCCTTTCTTACTTCATTAA+AGG + Chr8:15586023-15586042 MsG0880042895.01.T01:intron 25.0%
! ATGAAATTCTTGGAAACAAA+TGG + Chr8:15584913-15584932 MsG0880042895.01.T01:intron 25.0%
! ATGATTAGAACAAAGATGTA+AGG + Chr8:15587355-15587374 MsG0880042895.01.T01:exon 25.0%
! ATGATTGAATTTGAAGGTTT+GGG + Chr8:15584393-15584412 MsG0880042895.01.T01:intron 25.0%
! CCACAAATTATAATACCTTT+CGG - Chr8:15583490-15583509 None:intergenic 25.0%
! CCATCATTATTATACTTACT+AGG - Chr8:15585978-15585997 None:intergenic 25.0%
! CCTAGTAAGTATAATAATGA+TGG + Chr8:15585975-15585994 MsG0880042895.01.T01:intron 25.0%
! GAACATAATCTATCATTCTT+AGG - Chr8:15587511-15587530 None:intergenic 25.0%
! TAAGAATACAAAAATGAACG+AGG - Chr8:15587670-15587689 None:intergenic 25.0%
! TAATTAACACCACTAAACTT+TGG - Chr8:15582778-15582797 None:intergenic 25.0%
! TAGAACTCCAATTAAAATGA+AGG + Chr8:15583420-15583439 MsG0880042895.01.T01:CDS 25.0%
! TATTGCAATCTGTTTATTAC+AGG + Chr8:15584208-15584227 MsG0880042895.01.T01:intron 25.0%
! TCTACGTTGTAAATTATGAT+TGG + Chr8:15583738-15583757 MsG0880042895.01.T01:intron 25.0%
! TCTAGCCAAAATGATATAAT+TGG + Chr8:15587738-15587757 MsG0880042895.01.T01:three_prime_UTR 25.0%
! TGATTAGAACAAAGATGTAA+GGG + Chr8:15587356-15587375 MsG0880042895.01.T01:exon 25.0%
! TGTTTATTACAGGTAAAAGT+AGG + Chr8:15584218-15584237 MsG0880042895.01.T01:intron 25.0%
! TTACATCTTTGTTCTAATCA+TGG - Chr8:15587356-15587375 None:intergenic 25.0%
! TTATGTTGTTCTAATCTTGT+AGG + Chr8:15585383-15585402 MsG0880042895.01.T01:intron 25.0%
! TTCCTTTAATGAAGTAAGAA+AGG - Chr8:15586028-15586047 None:intergenic 25.0%
!! AATATGTTATGCCATTTCTT+AGG + Chr8:15586064-15586083 MsG0880042895.01.T01:intron 25.0%
!! ACAATGAAAACATTTTGTCA+AGG - Chr8:15584127-15584146 None:intergenic 25.0%
!! ATATGTTATGCCATTTCTTA+GGG + Chr8:15586065-15586084 MsG0880042895.01.T01:intron 25.0%
!! ATTATAAGTGCATTTTTCCA+AGG + Chr8:15587439-15587458 MsG0880042895.01.T01:three_prime_UTR 25.0%
!! GTAGCTTTTTATATTGTCTA+AGG + Chr8:15584553-15584572 MsG0880042895.01.T01:intron 25.0%
!! TAAGGCATCAAATTTGAAAT+TGG - Chr8:15582741-15582760 None:intergenic 25.0%
!! TTTAGTGCATTTTAGATTGA+CGG + Chr8:15586860-15586879 MsG0880042895.01.T01:intron 25.0%
!!! ACTGAATTTTGTTTGGAATT+AGG + Chr8:15587220-15587239 MsG0880042895.01.T01:intron 25.0%
!!! ATGTTTTGATTTTTGTATGC+AGG + Chr8:15584956-15584975 MsG0880042895.01.T01:intron 25.0%
!!! ATTGTCAATTTTTTATGCTG+AGG + Chr8:15587565-15587584 MsG0880042895.01.T01:three_prime_UTR 25.0%
!!! CTGAATTTTGTTTGGAATTA+GGG + Chr8:15587221-15587240 MsG0880042895.01.T01:intron 25.0%
!!! TAAAGTCAAATGTTTGTTGT+TGG - Chr8:15583019-15583038 None:intergenic 25.0%
!!! TCACATTTTTTACTTCAACT+AGG + Chr8:15586500-15586519 MsG0880042895.01.T01:intron 25.0%
!!! TCACCTTTTCAAGAAATATA+GGG - Chr8:15584313-15584332 None:intergenic 25.0%
!!! TGTATCCTAATTTTTTTCGT+AGG - Chr8:15587063-15587082 None:intergenic 25.0%
!!! TTCTTTCATTGCTTTAAAAG+AGG + Chr8:15584263-15584282 MsG0880042895.01.T01:CDS 25.0%
!!! TTGTCAATTTTTTATGCTGA+GGG + Chr8:15587566-15587585 MsG0880042895.01.T01:three_prime_UTR 25.0%
AAAACTACTAAGTGCATGTT+TGG - Chr8:15586972-15586991 None:intergenic 30.0%
AAATATTTCTCAGGACCATA+TGG + Chr8:15584872-15584891 MsG0880042895.01.T01:CDS 30.0%
AAATTCAGTTACTCAGTTGA+TGG - Chr8:15587209-15587228 None:intergenic 30.0%
AATTCAGTTACTCAGTTGAT+GGG - Chr8:15587208-15587227 None:intergenic 30.0%
ACATCCTCCTTAATAAATTG+GGG - Chr8:15585943-15585962 None:intergenic 30.0%
ACGAGCAATAAATATTTCTC+AGG + Chr8:15584863-15584882 MsG0880042895.01.T01:CDS 30.0%
ACTTATAATTACTCCATCAC+TGG - Chr8:15587428-15587447 None:intergenic 30.0%
AGAAAAGCCAATACACATAA+TGG + Chr8:15583361-15583380 MsG0880042895.01.T01:CDS 30.0%
AGAAATGATCAAGAATTGCA+TGG + Chr8:15586800-15586819 MsG0880042895.01.T01:CDS 30.0%
AGAATACAAAAATGAACGAG+GGG - Chr8:15587668-15587687 None:intergenic 30.0%
AGACTGTGATTTACTGTTAA+AGG - Chr8:15584665-15584684 None:intergenic 30.0%
AGTTCTTCAAACTTTCTTTC+TGG + Chr8:15585168-15585187 MsG0880042895.01.T01:intron 30.0%
ATAATTTCACAAGTGATGAG+AGG + Chr8:15583163-15583182 MsG0880042895.01.T01:intron 30.0%
ATACACAGGTTTAAATTCCT+TGG - Chr8:15587459-15587478 None:intergenic 30.0%
ATATTTAGGAATGCCAAAGT+AGG + Chr8:15585061-15585080 MsG0880042895.01.T01:intron 30.0%
CAAACAACATTGTAACCAAA+GGG - Chr8:15584517-15584536 None:intergenic 30.0%
CAAATTATTGAGGAGTCTTA+TGG - Chr8:15586478-15586497 None:intergenic 30.0%
CAAGGGAAAAAAAATGACAA+AGG - Chr8:15584794-15584813 None:intergenic 30.0%
CATGACAAGTTTATCCAAAT+AGG + Chr8:15587170-15587189 MsG0880042895.01.T01:intron 30.0%
CCTGTTAAGATTATTTCCAA+GGG - Chr8:15584811-15584830 None:intergenic 30.0%
CTATAATATACTAGCTAACC+AGG - Chr8:15582716-15582735 None:intergenic 30.0%
CTATTTGGATAAACTTGTCA+TGG - Chr8:15587172-15587191 None:intergenic 30.0%
CTTATAATTACTCCATCACT+GGG - Chr8:15587427-15587446 None:intergenic 30.0%
GAACATCCTCCTTAATAAAT+TGG - Chr8:15585945-15585964 None:intergenic 30.0%
GACACAATTGCATTAAATGA+AGG - Chr8:15586632-15586651 None:intergenic 30.0%
GATAGCCTACGAAAAAAATT+AGG + Chr8:15587055-15587074 MsG0880042895.01.T01:intron 30.0%
GATGATTGAATTTGAAGGTT+TGG + Chr8:15584392-15584411 MsG0880042895.01.T01:intron 30.0%
GTACAAATTAGGATTCTCTA+TGG + Chr8:15582936-15582955 MsG0880042895.01.T01:intron 30.0%
GTTGAACTAATTAAGCTTCA+AGG - Chr8:15582668-15582687 None:intergenic 30.0%
TAAAACGTAGTTGATTGTCT+TGG - Chr8:15584465-15584484 None:intergenic 30.0%
TAACTATAGCATAGCACAAT+TGG - Chr8:15584179-15584198 None:intergenic 30.0%
TATAATGATAGATTGGCGAT+CGG - Chr8:15587644-15587663 None:intergenic 30.0%
TCACCCTATATTTCTTGAAA+AGG + Chr8:15584307-15584326 MsG0880042895.01.T01:CDS 30.0%
TCCAACACATTAGTTACAAT+CGG - Chr8:15583906-15583925 None:intergenic 30.0%
TCTCTAATTTATCACTCTCT+AGG + Chr8:15584010-15584029 MsG0880042895.01.T01:intron 30.0%
TGAAACTTCAAATCTAAGTC+TGG + Chr8:15583187-15583206 MsG0880042895.01.T01:five_prime_UTR 30.0%
TGAAATATCATATCCTGACA+AGG + Chr8:15586127-15586146 MsG0880042895.01.T01:CDS 30.0%
TGACTATAGTTCATACCATA+TGG - Chr8:15584890-15584909 None:intergenic 30.0%
TGATTGAATTTGAAGGTTTG+GGG + Chr8:15584394-15584413 MsG0880042895.01.T01:intron 30.0%
TTAAACCTGTGTATCTAACT+TGG + Chr8:15587465-15587484 MsG0880042895.01.T01:three_prime_UTR 30.0%
TTAATGCAATTGTGTCCATA+CGG + Chr8:15586636-15586655 MsG0880042895.01.T01:intron 30.0%
TTACTACTTAATCTACCGTA+TGG - Chr8:15586654-15586673 None:intergenic 30.0%
TTATAATTACTCCATCACTG+GGG - Chr8:15587426-15587445 None:intergenic 30.0%
TTCTTCATGAACATTAGCAT+AGG - Chr8:15587028-15587047 None:intergenic 30.0%
TTGATCATTTCTGCAAAAGT+TGG - Chr8:15586792-15586811 None:intergenic 30.0%
TTGTTGGAAGAAAAATCAAC+TGG + Chr8:15585419-15585438 MsG0880042895.01.T01:CDS 30.0%
! AATGAGCTTTTAAATTGGTC+GGG - Chr8:15585282-15585301 None:intergenic 30.0%
! ACTCAGAATTTTGAACTCAT+TGG + Chr8:15583384-15583403 MsG0880042895.01.T01:CDS 30.0%
! AGTCGAATGAGCTTTTAAAT+TGG - Chr8:15585287-15585306 None:intergenic 30.0%
! ATTTCAAGTAGCATGAGATA+AGG - Chr8:15585021-15585040 None:intergenic 30.0%
! CTGAGTAACTGAATTTTGTT+TGG + Chr8:15587213-15587232 MsG0880042895.01.T01:intron 30.0%
! GAATGAGCTTTTAAATTGGT+CGG - Chr8:15585283-15585302 None:intergenic 30.0%
! GGATAAATTTAGAGCCTATT+TGG - Chr8:15587187-15587206 None:intergenic 30.0%
! GTTTTATAACCATATCCCTT+TGG + Chr8:15584499-15584518 MsG0880042895.01.T01:intron 30.0%
! TTGATTTTTCTTCCAACAAC+TGG - Chr8:15585418-15585437 None:intergenic 30.0%
! TTTCAAGTAGCATGAGATAA+GGG - Chr8:15585020-15585039 None:intergenic 30.0%
! TTTTAGCAAAAGTTACAGTC+TGG - Chr8:15586930-15586949 None:intergenic 30.0%
!! AGAGGAATATTTTTGTCAAC+CGG - Chr8:15585859-15585878 None:intergenic 30.0%
!! CCGAAAGGTATTATAATTTG+TGG + Chr8:15583487-15583506 MsG0880042895.01.T01:CDS 30.0%
!! CTCACCTTTTCAAGAAATAT+AGG - Chr8:15584314-15584333 None:intergenic 30.0%
!! TTCACTGCCTTCATTTTAAT+TGG - Chr8:15583430-15583449 None:intergenic 30.0%
!!! ATCATTTTGGCTAGAATACA+AGG - Chr8:15587733-15587752 None:intergenic 30.0%
!!! CTTTGTCATTTTTTTTCCCT+TGG + Chr8:15584792-15584811 MsG0880042895.01.T01:intron 30.0%
AAAAATTTATGGACCTGCCA+CGG + Chr8:15584429-15584448 MsG0880042895.01.T01:intron 35.0%
AAAATCAACTGGATGAAAGC+TGG + Chr8:15585430-15585449 MsG0880042895.01.T01:CDS 35.0%
AAATCTATGTACCAGCCAAA+TGG + Chr8:15585037-15585056 MsG0880042895.01.T01:CDS 35.0%
AAATGAAGGCAGTGAAATCA+AGG + Chr8:15583434-15583453 MsG0880042895.01.T01:CDS 35.0%
AACTTCAAATCTAAGTCTGG+TGG + Chr8:15583190-15583209 MsG0880042895.01.T01:five_prime_UTR 35.0%
AATAGCAAAGACTGTCACAA+AGG + Chr8:15586746-15586765 MsG0880042895.01.T01:CDS 35.0%
AATGCCAAAGTAGGTCTAAA+TGG + Chr8:15585070-15585089 MsG0880042895.01.T01:intron 35.0%
ACATTGTAACCAAAGGGATA+TGG - Chr8:15584511-15584530 None:intergenic 35.0%
ACTTTCCAAGTTAGATACAC+AGG - Chr8:15587473-15587492 None:intergenic 35.0%
AGAAAGAATGTTATGCCGAA+AGG + Chr8:15583472-15583491 MsG0880042895.01.T01:CDS 35.0%
AGCCATTCCCCAATTTATTA+AGG + Chr8:15585933-15585952 MsG0880042895.01.T01:CDS 35.0%
AGGGTTATACTGCTTATTCA+TGG - Chr8:15587709-15587728 None:intergenic 35.0%
AGGTATGTTAAACCAGTTGT+TGG + Chr8:15585403-15585422 MsG0880042895.01.T01:intron 35.0%
AGTAAGCTTACTGCTAATAC+TGG - Chr8:15583595-15583614 None:intergenic 35.0%
ATTCCTCTCATTGCTTTCAT+TGG + Chr8:15585871-15585890 MsG0880042895.01.T01:CDS 35.0%
ATTTCCTTGTAGCTTGGATT+TGG - Chr8:15583097-15583116 None:intergenic 35.0%
ATTTCTTCTCCATCAATTCC+AGG - Chr8:15587302-15587321 None:intergenic 35.0%
CACTACATACAATCCAAATC+TGG - Chr8:15586322-15586341 None:intergenic 35.0%
CATTCCCCAATTTATTAAGG+AGG + Chr8:15585936-15585955 MsG0880042895.01.T01:CDS 35.0%
CATTGTAATCTTCATTGCAC+AGG + Chr8:15584141-15584160 MsG0880042895.01.T01:intron 35.0%
CCAACACATTAGTTACAATC+GGG - Chr8:15583905-15583924 None:intergenic 35.0%
CCCTTGGAAATAATCTTAAC+AGG + Chr8:15584808-15584827 MsG0880042895.01.T01:intron 35.0%
CTCCTTAATAAATTGGGGAA+TGG - Chr8:15585938-15585957 None:intergenic 35.0%
GACAGTTATGTATTTGTCAG+TGG - Chr8:15585611-15585630 None:intergenic 35.0%
GAGCTATAGAGAATTTGGAA+TGG + Chr8:15583119-15583138 MsG0880042895.01.T01:intron 35.0%
GAGGGGATATAATGATAGAT+TGG - Chr8:15587651-15587670 None:intergenic 35.0%
GCAAACAACATTGTAACCAA+AGG - Chr8:15584518-15584537 None:intergenic 35.0%
GCAATTATCATGTGTGCTAA+GGG - Chr8:15586179-15586198 None:intergenic 35.0%
GCATTCCTAAATATGCCATT+TGG - Chr8:15585055-15585074 None:intergenic 35.0%
GCCTGTTAAGATTATTTCCA+AGG - Chr8:15584812-15584831 None:intergenic 35.0%
GGATACAAGTGTAACAATTG+AGG + Chr8:15584091-15584110 MsG0880042895.01.T01:CDS 35.0%
GGCATGAATTTGATCTTTGT+TGG + Chr8:15583508-15583527 MsG0880042895.01.T01:CDS 35.0%
GTTATAAAACCTGACAGAAG+AGG - Chr8:15584489-15584508 None:intergenic 35.0%
GTTATGTATTTGTCAGTGGA+TGG - Chr8:15585607-15585626 None:intergenic 35.0%
TACTGGTATTGTAAATGGCA+TGG + Chr8:15585564-15585583 MsG0880042895.01.T01:CDS 35.0%
TAGCAGTAAGCTTACTGTTA+TGG + Chr8:15583599-15583618 MsG0880042895.01.T01:intron 35.0%
TCATGAACATTAGCATAGGT+AGG - Chr8:15587024-15587043 None:intergenic 35.0%
TCTGAGTCCATTATGTGTAT+TGG - Chr8:15583371-15583390 None:intergenic 35.0%
TCTGTAGTGGTTGACATATT+TGG + Chr8:15583961-15583980 MsG0880042895.01.T01:intron 35.0%
TGCAATTATCATGTGTGCTA+AGG - Chr8:15586180-15586199 None:intergenic 35.0%
TTAGACTCACATGAGATAGT+TGG - Chr8:15583313-15583332 None:intergenic 35.0%
TTAGCACACATGATAATTGC+AGG + Chr8:15586179-15586198 MsG0880042895.01.T01:CDS 35.0%
TTCTTAGGGAACAGGAAAAA+AGG + Chr8:15586079-15586098 MsG0880042895.01.T01:intron 35.0%
TTTATCACTCTCTAGGCTAA+TGG + Chr8:15584017-15584036 MsG0880042895.01.T01:intron 35.0%
TTTGATCTTTGTTGGAACTG+AGG + Chr8:15583516-15583535 MsG0880042895.01.T01:CDS 35.0%
TTTGGCTAGAATACAAGGAA+GGG - Chr8:15587728-15587747 None:intergenic 35.0%
! AACTGGACTGTCAATTTTGA+TGG + Chr8:15586385-15586404 MsG0880042895.01.T01:intron 35.0%
! ACTAGTTCTTGAGCATAGTA+TGG - Chr8:15585490-15585509 None:intergenic 35.0%
! AGATAGTTGGTACATTGACA+TGG - Chr8:15583300-15583319 None:intergenic 35.0%
! ATGGACTAACAGTTAAAACC+CGG - Chr8:15585471-15585490 None:intergenic 35.0%
! CTAATTTGTACAACTCGATC+CGG - Chr8:15582927-15582946 None:intergenic 35.0%
! GATCGTCTGAAATTGAAAAC+TGG + Chr8:15586368-15586387 MsG0880042895.01.T01:intron 35.0%
! TCATTTTCGTCGCTAATGAT+TGG + Chr8:15584987-15585006 MsG0880042895.01.T01:CDS 35.0%
! TCTTTGTATTGGTCATAACG+TGG - Chr8:15584065-15584084 None:intergenic 35.0%
! TTCTGGTTGCTACCATTATT+AGG + Chr8:15585185-15585204 MsG0880042895.01.T01:intron 35.0%
! TTTTAGATTGACGGTGAGTT+TGG + Chr8:15586869-15586888 MsG0880042895.01.T01:intron 35.0%
! TTTTCCTGTTCCCTAAGAAA+TGG - Chr8:15586078-15586097 None:intergenic 35.0%
!! AGTTTCTCTAAAATGTGTCG+TGG + Chr8:15585675-15585694 MsG0880042895.01.T01:intron 35.0%
!! GGTGTTACTGGTATTGTAAA+TGG + Chr8:15585559-15585578 MsG0880042895.01.T01:CDS 35.0%
!! TTTTGGCTAGAATACAAGGA+AGG - Chr8:15587729-15587748 None:intergenic 35.0%
!!! AATTTTTTATGCTGAGGGTG+AGG + Chr8:15587571-15587590 MsG0880042895.01.T01:three_prime_UTR 35.0%
!!! CTGGAATTTTAGAATCTCAC+CGG + Chr8:15585449-15585468 MsG0880042895.01.T01:CDS 35.0%
!!! TGGAATTTTAGAATCTCACC+GGG + Chr8:15585450-15585469 MsG0880042895.01.T01:CDS 35.0%
AAAATTTATGGACCTGCCAC+GGG + Chr8:15584430-15584449 MsG0880042895.01.T01:intron 40.0%
AAGCTTACTGCTAATACTGG+TGG - Chr8:15583592-15583611 None:intergenic 40.0%
ACAGTCAAAGAAGGTTTCAC+TGG + Chr8:15586558-15586577 MsG0880042895.01.T01:CDS 40.0%
ACCAGCCAAATGGCATATTT+AGG + Chr8:15585047-15585066 MsG0880042895.01.T01:CDS 40.0%
AGCTCACAGAGAGAAATTTG+TGG + Chr8:15584579-15584598 MsG0880042895.01.T01:intron 40.0%
AGCTCATTCGACTTCATAGA+TGG + Chr8:15585294-15585313 MsG0880042895.01.T01:CDS 40.0%
AGGAAAGGATTGTGTGAAGT+AGG - Chr8:15586289-15586308 None:intergenic 40.0%
AGGTTTCACTGGATTTCAGA+TGG + Chr8:15586569-15586588 MsG0880042895.01.T01:CDS 40.0%
AGTTAAGGAGTCGAGTGATA+AGG - Chr8:15587613-15587632 None:intergenic 40.0%
ATAATCTTAACAGGCAGCTC+TGG + Chr8:15584817-15584836 MsG0880042895.01.T01:intron 40.0%
ATCCACAACATTGCATACCA+AGG + Chr8:15585219-15585238 MsG0880042895.01.T01:CDS 40.0%
ATCTTTGTTGGAACTGAGGT+TGG + Chr8:15583520-15583539 MsG0880042895.01.T01:CDS 40.0%
ATGACCAATACAAAGATGCG+TGG + Chr8:15584069-15584088 MsG0880042895.01.T01:CDS 40.0%
CAATACCAGTAACACCAGTT+CGG - Chr8:15585555-15585574 None:intergenic 40.0%
CAATTTCAGACGATCCAGAT+TGG - Chr8:15586363-15586382 None:intergenic 40.0%
CCAAATCTGGAAAAACCACT+AGG - Chr8:15586309-15586328 None:intergenic 40.0%
CCAATTCCACTCCTTTATCT+GGG - Chr8:15585519-15585538 None:intergenic 40.0%
CCCGATTGTAACTAATGTGT+TGG + Chr8:15583902-15583921 MsG0880042895.01.T01:intron 40.0%
CTACCAATGAAAGCAATGAG+AGG - Chr8:15585877-15585896 None:intergenic 40.0%
CTCAATCTCTTGAAGGTTCA+TGG + Chr8:15587393-15587412 MsG0880042895.01.T01:three_prime_UTR 40.0%
CTCATAGAACCAAGTCTCAT+CGG - Chr8:15583343-15583362 None:intergenic 40.0%
CTGAATAATGTGAGTCTCAG+CGG - Chr8:15583862-15583881 None:intergenic 40.0%
CTGATAGCATTTCTCTGTAG+TGG + Chr8:15583948-15583967 MsG0880042895.01.T01:intron 40.0%
CTGGAGCTTCAACAAAATCA+CGG - Chr8:15586911-15586930 None:intergenic 40.0%
GCAAGAACATGGATCCTTTA+CGG + Chr8:15583051-15583070 MsG0880042895.01.T01:intron 40.0%
GCAGTGAAATCAAGGAGAAA+AGG + Chr8:15583442-15583461 MsG0880042895.01.T01:CDS 40.0%
GCTCAAATTTCCTTGTAGCT+TGG - Chr8:15583103-15583122 None:intergenic 40.0%
GCTCATTCGACTTCATAGAT+GGG + Chr8:15585295-15585314 MsG0880042895.01.T01:CDS 40.0%
GGGAACAGGAAAAAAGGAAA+TGG + Chr8:15586085-15586104 MsG0880042895.01.T01:intron 40.0%
GGTAGACTTGAAGAGCAAAA+AGG + Chr8:15585892-15585911 MsG0880042895.01.T01:CDS 40.0%
GGTTTCACTGGATTTCAGAT+GGG + Chr8:15586570-15586589 MsG0880042895.01.T01:CDS 40.0%
TAAAGAGAGCTGCAAGAACA+TGG + Chr8:15583040-15583059 MsG0880042895.01.T01:intron 40.0%
TATCCCACGCATCTTTGTAT+TGG - Chr8:15584076-15584095 None:intergenic 40.0%
TATGCTCAAGAACTAGTGTC+AGG + Chr8:15585493-15585512 MsG0880042895.01.T01:CDS 40.0%
TCCAATTCCACTCCTTTATC+TGG - Chr8:15585520-15585539 None:intergenic 40.0%
TCTGGAAAAACCACTAGGAA+AGG - Chr8:15586304-15586323 None:intergenic 40.0%
TGACCAATACAAAGATGCGT+GGG + Chr8:15584070-15584089 MsG0880042895.01.T01:CDS 40.0%
TGAGACTCACATTATTCAGC+AGG + Chr8:15583863-15583882 MsG0880042895.01.T01:intron 40.0%
TGAGTTTGGCAAAATCAAGG+TGG + Chr8:15586883-15586902 MsG0880042895.01.T01:intron 40.0%
TTCACACAATCCTTTCCTAG+TGG + Chr8:15586291-15586310 MsG0880042895.01.T01:intron 40.0%
TTGAAGGTTTGGGGAAAAAC+TGG + Chr8:15584403-15584422 MsG0880042895.01.T01:intron 40.0%
TTTAACTAGCTCGTCTACTC+AGG + Chr8:15585780-15585799 MsG0880042895.01.T01:intron 40.0%
! CCTAGTGGTTTTTCCAGATT+TGG + Chr8:15586306-15586325 MsG0880042895.01.T01:intron 40.0%
! CGGATCGAGTTGTACAAATT+AGG + Chr8:15582925-15582944 MsG0880042895.01.T01:intron 40.0%
! GGAGTCTTATGGCAGAAAAT+CGG - Chr8:15586467-15586486 None:intergenic 40.0%
! GTTGCCATTTAGACCTACTT+TGG - Chr8:15585077-15585096 None:intergenic 40.0%
! TATGCCATTTCTTAGGGAAC+AGG + Chr8:15586071-15586090 MsG0880042895.01.T01:intron 40.0%
! TCCTAAATATGCCATTTGGC+TGG - Chr8:15585051-15585070 None:intergenic 40.0%
! TGCTAGTCTCAATCTCTTGA+AGG + Chr8:15587386-15587405 MsG0880042895.01.T01:three_prime_UTR 40.0%
! TTAGTGGACACAGTCAAAGA+AGG + Chr8:15586549-15586568 MsG0880042895.01.T01:CDS 40.0%
! TTGGAGTGCTTCTTTCAGAA+GGG - Chr8:15585821-15585840 None:intergenic 40.0%
! TTTTACTTAGTGTGACGCTG+TGG + Chr8:15586704-15586723 MsG0880042895.01.T01:intron 40.0%
AACCAGGTAATGAAGCACAC+AGG - Chr8:15582700-15582719 None:intergenic 45.0%
AATAATGTGAGTCTCAGCGG+CGG - Chr8:15583859-15583878 None:intergenic 45.0%
ACCAGGTAATGAAGCACACA+GGG - Chr8:15582699-15582718 None:intergenic 45.0%
AGAAATTGCTCCACAGGCAA+AGG + Chr8:15587316-15587335 MsG0880042895.01.T01:CDS 45.0%
ATGGCATGGATGTTCAAGAG+TGG + Chr8:15585578-15585597 MsG0880042895.01.T01:CDS 45.0%
ATTAGGGACCTGCTAAGAAG+TGG + Chr8:15587237-15587256 MsG0880042895.01.T01:intron 45.0%
CCACAAGGCTCAAATCTACT+AGG - Chr8:15586224-15586243 None:intergenic 45.0%
CCCAGATAAAGGAGTGGAAT+TGG + Chr8:15585516-15585535 MsG0880042895.01.T01:CDS 45.0%
CCTAGTAGATTTGAGCCTTG+TGG + Chr8:15586221-15586240 MsG0880042895.01.T01:CDS 45.0%
CGACGATTCGACAGTAAGAA+TGG + Chr8:15585636-15585655 MsG0880042895.01.T01:intron 45.0%
CGGTGAGTTTGGCAAAATCA+AGG + Chr8:15586880-15586899 MsG0880042895.01.T01:intron 45.0%
GCATGGCTCAAGATCTTTCA+TGG + Chr8:15586817-15586836 MsG0880042895.01.T01:CDS 45.0%
GCTTGGATTTGGATCCTCTA+TGG - Chr8:15583086-15583105 None:intergenic 45.0%
GGATCCAAATCCAAGCTACA+AGG + Chr8:15583090-15583109 MsG0880042895.01.T01:intron 45.0%
GGCTCAAGATCTTTCATGGA+AGG + Chr8:15586821-15586840 MsG0880042895.01.T01:CDS 45.0%
GGTGGTTTAGGAGATGTTCT+AGG + Chr8:15583559-15583578 MsG0880042895.01.T01:CDS 45.0%
GTACCAATTGTTGCCTCAAC+AGG + Chr8:15586522-15586541 MsG0880042895.01.T01:CDS 45.0%
TAAGGAGTCGAGTGATAAGG+AGG - Chr8:15587610-15587629 None:intergenic 45.0%
TAGCTCGTCTACTCAGGTAT+TGG + Chr8:15585786-15585805 MsG0880042895.01.T01:intron 45.0%
TCATATCCTGACAAGGCTAG+AGG + Chr8:15586134-15586153 MsG0880042895.01.T01:CDS 45.0%
TGCCTTGGTATGCAATGTTG+TGG - Chr8:15585224-15585243 None:intergenic 45.0%
TGGAGAAGAAATTGCTCCAC+AGG + Chr8:15587310-15587329 MsG0880042895.01.T01:CDS 45.0%
TGGAGCAAAACTGGTGGTTT+AGG + Chr8:15583547-15583566 MsG0880042895.01.T01:CDS 45.0%
TGGAGTTCCATAGACTGCAA+GGG - Chr8:15586772-15586791 None:intergenic 45.0%
TGTAGCTGAATGAGACCACA+AGG - Chr8:15586239-15586258 None:intergenic 45.0%
TTAGGGACCTGCTAAGAAGT+GGG + Chr8:15587238-15587257 MsG0880042895.01.T01:intron 45.0%
TTGAATATCGCCGTTTGAGC+CGG + Chr8:15582905-15582924 MsG0880042895.01.T01:five_prime_UTR 45.0%
TTGGAGTTCCATAGACTGCA+AGG - Chr8:15586773-15586792 None:intergenic 45.0%
! AAACCACCAGTTTTGCTCCA+TGG - Chr8:15583547-15583566 None:intergenic 45.0%
! CTTGGAGTGCTTCTTTCAGA+AGG - Chr8:15585822-15585841 None:intergenic 45.0%
! GCTACATTTTCCTTTGCCTG+TGG - Chr8:15587329-15587348 None:intergenic 45.0%
! GGTAGCTTTACACGACTAGT+AGG - Chr8:15587003-15587022 None:intergenic 45.0%
! GGTTTAGGAGATGTTCTAGG+AGG + Chr8:15583562-15583581 MsG0880042895.01.T01:CDS 45.0%
!! AAAACAGCACCGATGAGACT+TGG + Chr8:15583331-15583350 MsG0880042895.01.T01:CDS 45.0%
!! ACGTTTTAGCCTCTTCTGTC+AGG + Chr8:15584477-15584496 MsG0880042895.01.T01:intron 45.0%
!! GAGGAAGTGCTGCTAAGTTT+GGG + Chr8:15587260-15587279 MsG0880042895.01.T01:CDS 45.0%
!! TCGTCTACTCAGGTATTGGA+AGG + Chr8:15585790-15585809 MsG0880042895.01.T01:intron 45.0%
ACAAAGGCCCTTGCAGTCTA+TGG + Chr8:15586762-15586781 MsG0880042895.01.T01:CDS 50.0%
ACAACTCGATCCGGCTCAAA+CGG - Chr8:15582918-15582937 None:intergenic 50.0%
ACTTCCTCCCACTTCTTAGC+AGG - Chr8:15587248-15587267 None:intergenic 50.0%
ATAATGTGAGTCTCAGCGGC+GGG - Chr8:15583858-15583877 None:intergenic 50.0%
ATGGAACTTCACCCCAGTGA+TGG + Chr8:15587412-15587431 MsG0880042895.01.T01:three_prime_UTR 50.0%
CAGCTACAAGCTATGCGCTA+CGG + Chr8:15586251-15586270 MsG0880042895.01.T01:CDS 50.0%
CCAAGCAGAAGTTGGATTGC+CGG + Chr8:15585837-15585856 MsG0880042895.01.T01:CDS 50.0%
CCAAGGCAGATTTGCATTCG+CGG + Chr8:15585236-15585255 MsG0880042895.01.T01:CDS 50.0%
CCAATTGTTGCCTCAACAGG+TGG + Chr8:15586525-15586544 MsG0880042895.01.T01:CDS 50.0%
CCACCTGTTGAGGCAACAAT+TGG - Chr8:15586528-15586547 None:intergenic 50.0%
CGATCGGAGTGAGCAAGTTA+AGG - Chr8:15587628-15587647 None:intergenic 50.0%
CGTCGCTAATGATTGGCACA+CGG + Chr8:15584994-15585013 MsG0880042895.01.T01:CDS 50.0%
CTAGTGTCAGGCCCAGATAA+AGG + Chr8:15585505-15585524 MsG0880042895.01.T01:CDS 50.0%
CTGCTAAGTTTGGGAGTTCC+TGG + Chr8:15587269-15587288 MsG0880042895.01.T01:CDS 50.0%
GACAACATTCTTCGCCGAAC+TGG + Chr8:15585538-15585557 MsG0880042895.01.T01:CDS 50.0%
GCTATTGCATCCACATCAGC+CGG - Chr8:15586732-15586751 None:intergenic 50.0%
GGCAGTGAACCTGGAATTGA+TGG + Chr8:15587290-15587309 MsG0880042895.01.T01:CDS 50.0%
GTCCACTAATCCACCTGTTG+AGG - Chr8:15586538-15586557 None:intergenic 50.0%
GTTGGTCCATGGAGCAAAAC+TGG + Chr8:15583538-15583557 MsG0880042895.01.T01:CDS 50.0%
TCAATTCCAGGTTCACTGCC+AGG - Chr8:15587290-15587309 None:intergenic 50.0%
TCCCTGTGTGCTTCATTACC+TGG + Chr8:15582695-15582714 MsG0880042895.01.T01:five_prime_UTR 50.0%
TGCATGCAGTCAGTCCAATC+TGG + Chr8:15586346-15586365 MsG0880042895.01.T01:intron 50.0%
TGGATCCTTTACGGACGCAA+CGG + Chr8:15583060-15583079 MsG0880042895.01.T01:intron 50.0%
TTAGTGTGACGCTGTGGATC+CGG + Chr8:15586710-15586729 MsG0880042895.01.T01:intron 50.0%
TTGGTCATAACGTGGAGCGA+TGG - Chr8:15584057-15584076 None:intergenic 50.0%
! GAAGCACTCCAAGCAGAAGT+TGG + Chr8:15585829-15585848 MsG0880042895.01.T01:CDS 50.0%
! GTCTTGGTAATCATCTCCCG+TGG - Chr8:15584449-15584468 None:intergenic 50.0%
! TTGGAACTGAGGTTGGTCCA+TGG + Chr8:15583527-15583546 MsG0880042895.01.T01:CDS 50.0%
!! GGAGGAAGTGCTGCTAAGTT+TGG + Chr8:15587259-15587278 MsG0880042895.01.T01:CDS 50.0%
!! TGCCTCAACAGGTGGATTAG+TGG + Chr8:15586533-15586552 MsG0880042895.01.T01:CDS 50.0%
CCGCGAATGCAAATCTGCCT+TGG - Chr8:15585239-15585258 None:intergenic 55.0%
CCGGCAATCCAACTTCTGCT+TGG - Chr8:15585840-15585859 None:intergenic 55.0%
GGTCCATGGAGCAAAACTGG+TGG + Chr8:15583541-15583560 MsG0880042895.01.T01:CDS 55.0%
GTCAGGCCCAGATAAAGGAG+TGG + Chr8:15585510-15585529 MsG0880042895.01.T01:CDS 55.0%
TATGGCCGTTGCGTCCGTAA+AGG - Chr8:15583068-15583087 None:intergenic 55.0%
TGGTAATCATCTCCCGTGGC+AGG - Chr8:15584445-15584464 None:intergenic 55.0%
!! CTTCGCCGAACTGGTGTTAC+TGG + Chr8:15585547-15585566 MsG0880042895.01.T01:CDS 55.0%
!! GCAACTCCTCTAGCCTTGTC+AGG - Chr8:15586143-15586162 None:intergenic 55.0%
GGAGTTCCTGGCAGTGAACC+TGG + Chr8:15587281-15587300 MsG0880042895.01.T01:CDS 60.0%
GGGACCTGCTAAGAAGTGGG+AGG + Chr8:15587241-15587260 MsG0880042895.01.T01:intron 60.0%
TACGGACGCAACGGCCATAG+AGG + Chr8:15583069-15583088 MsG0880042895.01.T01:intron 60.0%
!! AGGCAGCTCTGGAAGCAGCA+AGG + Chr8:15584828-15584847 MsG0880042895.01.T01:intron 60.0%
!! GGCAGCTCTGGAAGCAGCAA+GGG + Chr8:15584829-15584848 MsG0880042895.01.T01:intron 60.0%
CGCTGTGGATCCGGCTGATG+TGG + Chr8:15586719-15586738 MsG0880042895.01.T01:CDS 65.0%
GCTGACTGCGCGCACTCACG+AGG + Chr8:15586418-15586437 MsG0880042895.01.T01:intron 70.0%
Chromosome Type Strat End Strand Name
Chr8 gene 15582623 15587774 15582623 ID=MsG0880042895.01;Name=MsG0880042895.01
Chr8 mRNA 15582623 15587774 15582623 ID=MsG0880042895.01.T01;Parent=MsG0880042895.01;Name=MsG0880042895.01.T01;_AED=0.26;_eAED=0.26;_QI=388|0.91|1|1|0.91|0.84|13|416|586
Chr8 exon 15582623 15582942 15582623 ID=MsG0880042895.01.T01:exon:4003;Parent=MsG0880042895.01.T01
Chr8 exon 15583176 15583603 15583176 ID=MsG0880042895.01.T01:exon:4004;Parent=MsG0880042895.01.T01
Chr8 exon 15584032 15584112 15584032 ID=MsG0880042895.01.T01:exon:4005;Parent=MsG0880042895.01.T01
Chr8 exon 15584230 15584328 15584230 ID=MsG0880042895.01.T01:exon:4006;Parent=MsG0880042895.01.T01
Chr8 exon 15584830 15584893 15584830 ID=MsG0880042895.01.T01:exon:4007;Parent=MsG0880042895.01.T01
Chr8 exon 15584978 15585078 15584978 ID=MsG0880042895.01.T01:exon:4008;Parent=MsG0880042895.01.T01
Chr8 exon 15585207 15585316 15585207 ID=MsG0880042895.01.T01:exon:4009;Parent=MsG0880042895.01.T01
Chr8 exon 15585405 15585648 15585405 ID=MsG0880042895.01.T01:exon:4010;Parent=MsG0880042895.01.T01
Chr8 exon 15585802 15585978 15585802 ID=MsG0880042895.01.T01:exon:4011;Parent=MsG0880042895.01.T01
Chr8 exon 15586086 15586277 15586086 ID=MsG0880042895.01.T01:exon:4012;Parent=MsG0880042895.01.T01
Chr8 exon 15586522 15586608 15586522 ID=MsG0880042895.01.T01:exon:4013;Parent=MsG0880042895.01.T01
Chr8 exon 15586714 15586842 15586714 ID=MsG0880042895.01.T01:exon:4014;Parent=MsG0880042895.01.T01
Chr8 exon 15587242 15587774 15587242 ID=MsG0880042895.01.T01:exon:4015;Parent=MsG0880042895.01.T01
Chr8 five_prime_UTR 15582623 15582942 15582623 ID=MsG0880042895.01.T01:five_prime_utr;Parent=MsG0880042895.01.T01
Chr8 five_prime_UTR 15583176 15583243 15583176 ID=MsG0880042895.01.T01:five_prime_utr;Parent=MsG0880042895.01.T01
Chr8 CDS 15583244 15583603 15583244 ID=MsG0880042895.01.T01:cds;Parent=MsG0880042895.01.T01
Chr8 CDS 15584032 15584112 15584032 ID=MsG0880042895.01.T01:cds;Parent=MsG0880042895.01.T01
Chr8 CDS 15584230 15584328 15584230 ID=MsG0880042895.01.T01:cds;Parent=MsG0880042895.01.T01
Chr8 CDS 15584830 15584893 15584830 ID=MsG0880042895.01.T01:cds;Parent=MsG0880042895.01.T01
Chr8 CDS 15584978 15585078 15584978 ID=MsG0880042895.01.T01:cds;Parent=MsG0880042895.01.T01
Chr8 CDS 15585207 15585316 15585207 ID=MsG0880042895.01.T01:cds;Parent=MsG0880042895.01.T01
Chr8 CDS 15585405 15585648 15585405 ID=MsG0880042895.01.T01:cds;Parent=MsG0880042895.01.T01
Chr8 CDS 15585802 15585978 15585802 ID=MsG0880042895.01.T01:cds;Parent=MsG0880042895.01.T01
Chr8 CDS 15586086 15586277 15586086 ID=MsG0880042895.01.T01:cds;Parent=MsG0880042895.01.T01
Chr8 CDS 15586522 15586608 15586522 ID=MsG0880042895.01.T01:cds;Parent=MsG0880042895.01.T01
Chr8 CDS 15586714 15586842 15586714 ID=MsG0880042895.01.T01:cds;Parent=MsG0880042895.01.T01
Chr8 CDS 15587242 15587358 15587242 ID=MsG0880042895.01.T01:cds;Parent=MsG0880042895.01.T01
Chr8 three_prime_UTR 15587359 15587774 15587359 ID=MsG0880042895.01.T01:three_prime_utr;Parent=MsG0880042895.01.T01
Gene Sequence

>MsG0880042895.01.T01

ATGGCAACAGTGACTGCTTCAAGCAACATAGCATCAAGAAATTCTCATATCTACCATGTCAATGTACCAACTATCTCATGTGAGTCTAAAACAGCACCGATGAGACTTGGTTCTATGAGAAAAGCCAATACACATAATGGACTCAGAATTTTGAACTCATTGGATGAGCTACTAAATAGAACTCCAATTAAAATGAAGGCAGTGAAATCAAGGAGAAAAGGTCTTCAGAGAAAGAATGTTATGCCGAAAGGTATTATAATTTGTGGCATGAATTTGATCTTTGTTGGAACTGAGGTTGGTCCATGGAGCAAAACTGGTGGTTTAGGAGATGTTCTAGGAGGTCTTCCACCAGTATTAGCAGCTAATGGACACAGAGTTATGACCATCGCTCCACGTTATGACCAATACAAAGATGCGTGGGATACAAGTGTAACAATTGAGGTAAAAGTAGGAGATAGAAAAGAAAAAGTTCGCTTCTTTCATTGCTTTAAAAGAGGAGTTGATCGCGTCTTTGTAGATCACCCTATATTTCTTGAAAAGGCAGCTCTGGAAGCAGCAAGGGTTCTGAATCTCACGAGCAATAAATATTTCTCAGGACCATATGGTGAAGATGTCATTTTCGTCGCTAATGATTGGCACACGGCCCTTATCTCATGCTACTTGAAATCTATGTACCAGCCAAATGGCATATTTAGGAATGCCAAAGTTGTTTTTTGTATCCACAACATTGCATACCAAGGCAGATTTGCATTCGCGGACTATTCACTTCTCAATCTTCCCGACCAATTTAAAAGCTCATTCGACTTCATAGATGGGTATGTTAAACCAGTTGTTGGAAGAAAAATCAACTGGATGAAAGCTGGAATTTTAGAATCTCACCGGGTTTTAACTGTTAGTCCATACTATGCTCAAGAACTAGTGTCAGGCCCAGATAAAGGAGTGGAATTGGACAACATTCTTCGCCGAACTGGTGTTACTGGTATTGTAAATGGCATGGATGTTCAAGAGTGGAATCCATCCACTGACAAATACATAACTGTCAAATACGACGATTCGACAGTATTGGAAGGAAAAGCCCTTCTGAAAGAAGCACTCCAAGCAGAAGTTGGATTGCCGGTTGACAAAAATATTCCTCTCATTGCTTTCATTGGTAGACTTGAAGAGCAAAAAGGTTCTGATATTCTTGTAGCAGCCATTCCCCAATTTATTAAGGAGGATGTTCAGATAGTAGCCCTAGGAACAGGAAAAAAGGAAATGGAAAAGCAACTTCAACAACTTGAAATATCATATCCTGACAAGGCTAGAGGAGTTGCAAAATTCAATGTTCCCTTAGCACACATGATAATTGCAGGAGCTGATTATATATTGATTCCTAGTAGATTTGAGCCTTGTGGTCTCATTCAGCTACAAGCTATGCGCTACGGAACTGTACCAATTGTTGCCTCAACAGGTGGATTAGTGGACACAGTCAAAGAAGGTTTCACTGGATTTCAGATGGGTTCCTTCAATGTTGAATGTGACGCTGTGGATCCGGCTGATGTGGATGCAATAGCAAAGACTGTCACAAAGGCCCTTGCAGTCTATGGAACTCCAACTTTTGCAGAAATGATCAAGAATTGCATGGCTCAAGATCTTTCATGGAAGGGACCTGCTAAGAAGTGGGAGGAAGTGCTGCTAAGTTTGGGAGTTCCTGGCAGTGAACCTGGAATTGATGGAGAAGAAATTGCTCCACAGGCAAAGGAAAATGTAGCTACTCCATGA

Protein sequence

>MsG0880042895.01.T01

MATVTASSNIASRNSHIYHVNVPTISCESKTAPMRLGSMRKANTHNGLRILNSLDELLNRTPIKMKAVKSRRKGLQRKNVMPKGIIICGMNLIFVGTEVGPWSKTGGLGDVLGGLPPVLAANGHRVMTIAPRYDQYKDAWDTSVTIEVKVGDRKEKVRFFHCFKRGVDRVFVDHPIFLEKAALEAARVLNLTSNKYFSGPYGEDVIFVANDWHTALISCYLKSMYQPNGIFRNAKVVFCIHNIAYQGRFAFADYSLLNLPDQFKSSFDFIDGYVKPVVGRKINWMKAGILESHRVLTVSPYYAQELVSGPDKGVELDNILRRTGVTGIVNGMDVQEWNPSTDKYITVKYDDSTVLEGKALLKEALQAEVGLPVDKNIPLIAFIGRLEEQKGSDILVAAIPQFIKEDVQIVALGTGKKEMEKQLQQLEISYPDKARGVAKFNVPLAHMIIAGADYILIPSRFEPCGLIQLQAMRYGTVPIVASTGGLVDTVKEGFTGFQMGSFNVECDAVDPADVDAIAKTVTKALAVYGTPTFAEMIKNCMAQDLSWKGPAKKWEEVLLSLGVPGSEPGIDGEEIAPQAKENVATP*