AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280007600.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280007600.01.T01 MTR_2g028530 97.297 740 20 0 1 740 1 740 0.0 1467
MsG0280007600.01.T01 MTR_1g100150 31.755 718 448 15 39 739 9 701 1.52e-108 346
MsG0280007600.01.T01 MTR_1g100130 31.154 719 451 17 39 739 14 706 2.18e-105 338
MsG0280007600.01.T01 MTR_8g028780 32.421 731 423 20 39 738 9 699 2.55e-101 327
MsG0280007600.01.T01 MTR_8g028795 33.431 685 410 17 73 738 57 714 2.57e-101 327
MsG0280007600.01.T01 MTR_1g100130 32.097 620 382 14 133 739 2 595 8.04e-100 320
MsG0280007600.01.T01 MTR_8g028780 31.752 759 422 22 39 738 9 730 7.58e-97 316
MsG0280007600.01.T01 MTR_4g105080 30.806 633 402 13 128 740 98 714 1.88e-82 277
MsG0280007600.01.T01 MTR_4g105080 31.760 551 341 12 209 740 42 576 3.01e-78 262
MsG0280007600.01.T01 MTR_8g031070 28.291 714 393 19 39 738 9 617 1.69e-71 245
MsG0280007600.01.T01 MTR_2g043900 30.455 220 128 6 286 483 541 757 2.43e-22 103
MsG0280007600.01.T01 MTR_2g043900 30.455 220 128 6 286 483 541 757 2.95e-22 102
MsG0280007600.01.T01 MTR_2g043900 30.455 220 128 6 286 483 541 757 3.43e-22 102
MsG0280007600.01.T01 MTR_4g109530 25.651 269 168 8 289 533 475 735 4.67e-21 99.0
MsG0280007600.01.T01 MTR_7g113130 27.477 222 126 7 293 486 524 738 5.98e-21 98.6
MsG0280007600.01.T01 MTR_4g109530 25.651 269 168 8 289 533 460 720 6.23e-21 98.6
MsG0280007600.01.T01 MTR_7g113130 27.477 222 126 7 293 486 524 738 7.27e-21 98.6
MsG0280007600.01.T01 MTR_1g083290 26.749 243 148 6 293 509 511 749 8.13e-21 98.2
MsG0280007600.01.T01 MTR_8g099030 28.829 222 126 6 286 482 552 766 1.46e-20 97.4
MsG0280007600.01.T01 MTR_3g098380 26.697 221 124 5 293 483 541 753 4.41e-20 95.9
MsG0280007600.01.T01 MTR_8g095520 26.977 215 131 5 293 483 520 732 9.96e-20 94.7
MsG0280007600.01.T01 MTR_3g098350 27.511 229 127 6 286 483 527 747 1.57e-19 94.4
MsG0280007600.01.T01 MTR_3g098320 26.457 223 127 7 293 483 513 730 1.22e-17 88.2
MsG0280007600.01.T01 MTR_3g098320 26.457 223 127 7 293 483 522 739 1.35e-17 88.2
MsG0280007600.01.T01 MTR_7g060540 24.898 245 148 6 293 504 249 490 1.61e-17 87.0
MsG0280007600.01.T01 MTR_7g060540 24.898 245 148 6 293 504 249 490 2.29e-17 86.7
MsG0280007600.01.T01 MTR_7g060540 25.103 243 148 6 293 504 469 708 2.92e-17 87.0
MsG0280007600.01.T01 MTR_7g060540 24.898 245 148 6 293 504 469 710 3.80e-17 86.3
MsG0280007600.01.T01 MTR_7g113130 28.986 138 83 4 293 418 524 658 1.19e-13 75.1
MsG0280007600.01.T01 MTR_8g099030 29.530 149 92 4 286 423 552 698 3.84e-13 73.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280007600.01.T01 AT5G49740 58.275 719 283 6 36 740 32 747 0.0 867
MsG0280007600.01.T01 AT5G49730 57.858 719 284 7 36 740 25 738 0.0 860
MsG0280007600.01.T01 AT5G49740 57.015 670 271 6 36 691 32 698 0.0 781
MsG0280007600.01.T01 AT5G49740 61.057 511 193 3 36 540 32 542 0.0 651
MsG0280007600.01.T01 AT5G49730 60.665 511 193 4 36 540 25 533 0.0 648
MsG0280007600.01.T01 AT1G01580 33.714 700 410 17 67 739 52 724 7.45e-117 369
MsG0280007600.01.T01 AT1G01580 33.714 700 410 17 67 739 130 802 7.69e-116 368
MsG0280007600.01.T01 AT1G01590 33.237 689 408 17 48 715 28 685 2.75e-110 351
MsG0280007600.01.T01 AT5G23980 31.319 728 436 17 39 739 8 698 5.67e-108 344
MsG0280007600.01.T01 AT5G23990 31.818 726 435 18 39 739 8 698 1.29e-107 343
MsG0280007600.01.T01 AT1G23020 31.811 679 417 16 48 715 28 671 8.79e-102 328
MsG0280007600.01.T01 AT1G23020 31.818 682 416 17 48 715 28 674 1.18e-100 325
MsG0280007600.01.T01 AT1G23020 31.818 682 416 17 48 715 28 674 1.18e-100 325
MsG0280007600.01.T01 AT1G23020 31.818 682 416 17 48 715 51 697 1.78e-100 325
MsG0280007600.01.T01 AT1G23020 31.818 682 416 17 48 715 51 697 1.78e-100 325
MsG0280007600.01.T01 AT1G23020 31.625 683 417 17 48 715 28 675 6.08e-100 323
MsG0280007600.01.T01 AT1G23020 31.625 683 417 17 48 715 51 698 1.27e-99 323
MsG0280007600.01.T01 AT5G23990 33.618 586 341 14 170 739 13 566 2.76e-96 310
MsG0280007600.01.T01 AT5G23990 33.564 578 344 13 178 739 103 656 8.89e-95 308
MsG0280007600.01.T01 AT5G50160 30.170 706 428 16 76 740 47 728 1.42e-85 286
MsG0280007600.01.T01 AT5G50160 31.802 566 334 12 210 740 1 549 9.40e-77 258
MsG0280007600.01.T01 AT1G19230 30.631 222 128 5 286 484 536 754 1.36e-25 113
MsG0280007600.01.T01 AT1G19230 30.631 222 128 5 286 484 562 780 1.53e-25 113
MsG0280007600.01.T01 AT5G07390 28.384 229 130 7 284 483 479 702 5.80e-22 102
MsG0280007600.01.T01 AT5G07390 28.384 229 130 7 284 483 511 734 6.64e-22 102
MsG0280007600.01.T01 AT4G25090 29.412 221 130 7 284 483 473 688 6.67e-22 101
MsG0280007600.01.T01 AT4G25090 27.336 289 164 11 284 533 461 742 7.18e-22 101
MsG0280007600.01.T01 AT1G64060 29.817 218 129 6 286 482 558 772 2.14e-21 100
MsG0280007600.01.T01 AT1G09090 26.818 220 134 6 289 484 473 689 8.59e-21 98.2
MsG0280007600.01.T01 AT5G47910 28.761 226 128 6 293 493 554 771 1.75e-20 97.4
MsG0280007600.01.T01 AT5G51060 24.620 329 183 12 265 533 487 810 2.83e-19 93.6
MsG0280007600.01.T01 AT5G60010 27.826 230 129 7 293 487 494 721 1.16e-18 91.7
MsG0280007600.01.T01 AT4G11230 30.588 170 106 4 323 482 592 759 2.95e-18 90.1
MsG0280007600.01.T01 AT3G45810 26.271 236 139 6 285 487 497 730 1.78e-16 84.3
MsG0280007600.01.T01 AT1G09090 29.577 142 85 4 289 418 473 611 3.09e-14 77.0

Find 214 sgRNAs with CRISPR-Local

Find 361 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTGCACATGTTGGAGATTT+TGG 0.034807 2:-17902936 MsG0280007600.01.T01:CDS
AATAATATGTGCTTATAATT+TGG 0.131596 2:+17899392 None:intergenic
TTTATCAACCTTGATGTTAT+TGG 0.134284 2:+17900795 None:intergenic
TTTCCATAATCTTCATTATA+TGG 0.178699 2:-17904657 MsG0280007600.01.T01:CDS
TTTCCTATGCCTAGTGATTA+TGG 0.198831 2:-17901066 MsG0280007600.01.T01:CDS
TCACATTGCTGTTCTCATTA+AGG 0.202451 2:-17902016 MsG0280007600.01.T01:CDS
GAAGACTCACTTCTTGAATT+AGG 0.211364 2:+17902714 None:intergenic
CATAATCTTTATTGTGTTCA+TGG 0.219086 2:-17902399 MsG0280007600.01.T01:CDS
ATTGCATACCTAATTATTTC+TGG 0.228186 2:-17904248 MsG0280007600.01.T01:CDS
ATCCAGTTGGATTGGTTATA+TGG 0.235123 2:-17900933 MsG0280007600.01.T01:CDS
CAAACAATTAAAATATTTCT+TGG 0.237519 2:+17901581 None:intergenic
TTGGTACAGGAAACAATTTC+TGG 0.238946 2:-17901029 MsG0280007600.01.T01:CDS
CAATAAAGATTATGTATAAT+TGG 0.241871 2:+17902408 None:intergenic
GCTGTTCTCATTAAGGTTCT+TGG 0.262512 2:-17902009 MsG0280007600.01.T01:CDS
ATGTGGGTGACCTCGCTTCC+TGG 0.264483 2:-17902470 MsG0280007600.01.T01:CDS
TTGTTGTGTCAGCTACTAAA+TGG 0.270670 2:-17904696 MsG0280007600.01.T01:CDS
CAGTCCATTGTAAGATAAAA+AGG 0.273035 2:-17899566 MsG0280007600.01.T01:three_prime_UTR
GTAGCTGACACAACAAAATT+AGG 0.287451 2:+17904703 None:intergenic
AGCCCATATAATGAAGATTA+TGG 0.296364 2:+17904654 None:intergenic
GTGGTATAGTGGTTGGATTT+TGG 0.304110 2:-17900855 MsG0280007600.01.T01:CDS
TGAGTTATTTCTTGTAACTA+TGG 0.312971 2:-17904803 MsG0280007600.01.T01:exon
GGACTCCGTTCGGGCGGGAT+TGG 0.318769 2:-17902914 MsG0280007600.01.T01:CDS
TTCAGCAGTGGAACTTCCTT+TGG 0.321244 2:-17904571 MsG0280007600.01.T01:CDS
GATCCTCCCCAGAAATAATT+AGG 0.323576 2:+17904240 None:intergenic
ATCCTTAAAAGGACTCTATA+AGG 0.325913 2:-17899536 MsG0280007600.01.T01:three_prime_UTR
ATCCTTATCAATGGACCATT+TGG 0.329104 2:-17903878 MsG0280007600.01.T01:CDS
TTCCATAATCTTCATTATAT+GGG 0.341924 2:-17904656 MsG0280007600.01.T01:CDS
GTTTCTTCTAGCCCTTTAGA+TGG 0.344014 2:-17902045 MsG0280007600.01.T01:CDS
GTTGATAAAATTGAGCAAAA+TGG 0.345926 2:-17900781 MsG0280007600.01.T01:CDS
TGAATCCATGTCAGAGAAAT+GGG 0.346682 2:-17899921 MsG0280007600.01.T01:CDS
TGGAACCCATGATAATATTA+AGG 0.348435 2:+17904918 None:intergenic
AAACAAGTTTATAAGGGTTA+TGG 0.350301 2:+17899435 None:intergenic
CTTGTAGTCTGCATGGTTGC+AGG 0.353731 2:-17900892 MsG0280007600.01.T01:CDS
TCCTTATCAATGGACCATTT+GGG 0.354970 2:-17903877 MsG0280007600.01.T01:CDS
TCCTTGTGGCACTGTGGAAA+TGG 0.355192 2:-17902252 MsG0280007600.01.T01:CDS
TACCGCCTGCCACTAATATA+AGG 0.356412 2:+17901675 None:intergenic
CATTTACTGTCCTTCTTGAT+TGG 0.357857 2:+17902294 None:intergenic
TTGAATCCATGTCAGAGAAA+TGG 0.358458 2:-17899922 MsG0280007600.01.T01:CDS
TGCATGGATTGTTCACAAAA+TGG 0.360348 2:-17904600 MsG0280007600.01.T01:CDS
GGCTCTAGGCCAGACTTTAA+AGG 0.367135 2:-17900697 MsG0280007600.01.T01:intron
TTATTAGAATGGAAAGATAT+TGG 0.372165 2:-17902539 MsG0280007600.01.T01:CDS
CTATATGTTCCCTTCGTTGA+AGG 0.376889 2:-17899310 MsG0280007600.01.T01:three_prime_UTR
CCCCTTTGCAGTTATTAGAA+TGG 0.380554 2:-17902550 MsG0280007600.01.T01:intron
CTATGTTATTGAGTGGCTAA+TGG 0.381925 2:-17902744 MsG0280007600.01.T01:CDS
AAGGTACTATAATCCTTAAA+AGG 0.385912 2:-17899547 MsG0280007600.01.T01:three_prime_UTR
CAAAGCTATGACTGTGGAAA+TGG 0.386950 2:+17899789 None:intergenic
TTTCTACCTTAATATTATCA+TGG 0.389786 2:-17904924 MsG0280007600.01.T01:five_prime_UTR
TCATTAAGGTTCTTGGCAAA+TGG 0.391972 2:-17902002 MsG0280007600.01.T01:CDS
CTTGAAGGAAAATGAAGCTT+AGG 0.393980 2:+17902106 None:intergenic
ATATTAGTGGCAGGCGGTAT+TGG 0.396276 2:-17901671 MsG0280007600.01.T01:CDS
GCCACTTACATCAAGTGATA+TGG 0.399229 2:+17901868 None:intergenic
GCTGATAACTCCTGCTAGAT+TGG 0.399708 2:+17902511 None:intergenic
CAAGTGTTGCACAAGAAATC+AGG 0.401849 2:-17899850 MsG0280007600.01.T01:CDS
CAGCTACTAAATGGACTCTT+AGG 0.404900 2:-17904687 MsG0280007600.01.T01:CDS
TTGCATACCTAATTATTTCT+GGG 0.411386 2:-17904247 MsG0280007600.01.T01:CDS
GTCTTCCATCTTTCCATCAT+AGG 0.420077 2:+17899751 None:intergenic
CTATATAAATCCAGTTGGAT+TGG 0.422614 2:-17900941 MsG0280007600.01.T01:CDS
AGTCCTTTGCTTTCTAAGAA+AGG 0.424385 2:-17904760 MsG0280007600.01.T01:CDS
TATGTCATTTCATCTACCTT+AGG 0.424790 2:-17900997 MsG0280007600.01.T01:CDS
CACCATATAACCAATCCAAC+TGG 0.430042 2:+17900931 None:intergenic
AGGTTCTTGGCAAATGGACC+GGG 0.430067 2:-17901996 MsG0280007600.01.T01:CDS
TAATGATAATATTCACATAA+AGG 0.431733 2:+17899485 None:intergenic
AGAAATGCAATTGCAAGAAC+AGG 0.433105 2:+17904275 None:intergenic
AAGGTTCTTGGCAAATGGAC+CGG 0.434194 2:-17901997 MsG0280007600.01.T01:CDS
AAAGTCCATAGGCGAAATCT+TGG 0.434354 2:+17903905 None:intergenic
CTCTAGCTTCCTTCCTATGA+TGG 0.436112 2:-17899764 MsG0280007600.01.T01:exon
GTACGAAAACCTTATATTAG+TGG 0.439883 2:-17901684 MsG0280007600.01.T01:CDS
GAAAATATACCTTTAAAGTC+TGG 0.441652 2:+17900688 None:intergenic
TTTCTATGCTTATACTATGC+AGG 0.442358 2:-17903795 MsG0280007600.01.T01:CDS
TGATTATGGAATGTCTGGTT+TGG 0.443470 2:-17901052 MsG0280007600.01.T01:CDS
GCTTCGGTTGAGGGGCCATA+TGG 0.449802 2:-17901901 MsG0280007600.01.T01:CDS
CCTAGTGATTATGGAATGTC+TGG 0.452709 2:-17901057 MsG0280007600.01.T01:CDS
CCCCAAATGGTCCATTGATA+AGG 0.454422 2:+17903876 None:intergenic
AAATTCCACGTTCGCACTCC+AGG 0.454972 2:+17902452 None:intergenic
ATGCTGCAAAATATCATGTA+TGG 0.457558 2:-17902811 MsG0280007600.01.T01:CDS
GTGGTAACAGCTTCGGTTGA+GGG 0.460759 2:-17901910 MsG0280007600.01.T01:CDS
AGAACAGATCCCCTTGAAAT+CGG 0.461594 2:+17902863 None:intergenic
TTGTAGCTGGTTTGTTGATG+TGG 0.462418 2:-17902487 MsG0280007600.01.T01:CDS
GTTTCTGCAACAGAGCTCAT+TGG 0.463709 2:-17903851 MsG0280007600.01.T01:CDS
ATCTTCGGTGGTATAGTGGT+TGG 0.467954 2:-17900862 MsG0280007600.01.T01:CDS
TAGGCGAAATCTTGGATACT+TGG 0.468997 2:+17903913 None:intergenic
ACAGGAAACAATTTCTGGTC+TGG 0.469821 2:-17901024 MsG0280007600.01.T01:CDS
TTCTACCTTAATATTATCAT+GGG 0.470108 2:-17904923 MsG0280007600.01.T01:five_prime_UTR
AAGTTAACTACCATACAGTA+TGG 0.471321 2:-17900718 MsG0280007600.01.T01:CDS
TTCTCCATCGTGTGAGGGAT+GGG 0.474532 2:-17901616 MsG0280007600.01.T01:CDS
ACGATAATTCCCGAACTTGA+AGG 0.476050 2:+17902091 None:intergenic
AGTATCCAAGATTTCGCCTA+TGG 0.476533 2:-17903910 MsG0280007600.01.T01:CDS
CACATTAAATTTCATTTCAG+TGG 0.478013 2:-17904982 MsG0280007600.01.T01:five_prime_UTR
GTTGCAGGTGTAGTTATCTT+CGG 0.483407 2:-17900877 MsG0280007600.01.T01:CDS
TGTAGCTGGTTTGTTGATGT+GGG 0.488112 2:-17902486 MsG0280007600.01.T01:CDS
CGGGATTGGATTAATGTGCT+TGG 0.488988 2:-17902900 MsG0280007600.01.T01:CDS
AATATTAAGGTAGAAATATG+AGG 0.489639 2:+17904931 None:intergenic
AAATGGAAGATGGGGTGATA+AGG 0.493095 2:+17899806 None:intergenic
CGCTTCCTGGAGTGCGAACG+TGG 0.494322 2:-17902457 MsG0280007600.01.T01:CDS
GGAACTTCCTTTGGAATCAC+AGG 0.496264 2:-17904562 MsG0280007600.01.T01:intron
GTGTTCATGGCTTTGCATAT+TGG 0.498872 2:-17902386 MsG0280007600.01.T01:CDS
TGGTTATATGGTGGTACAAA+GGG 0.499086 2:-17900921 MsG0280007600.01.T01:CDS
GGAGTTATCAGCCTTGTAGC+TGG 0.499164 2:-17902500 MsG0280007600.01.T01:CDS
CAAAGCTCAAATTATAAATG+AGG 0.499965 2:+17899243 None:intergenic
TATGGAATGTCTGGTTTGGT+TGG 0.500105 2:-17901048 MsG0280007600.01.T01:CDS
GGAAAAGCAAAGTTCTCTAA+AGG 0.503179 2:-17900824 MsG0280007600.01.T01:CDS
GAAGCTGTTACCACCGTATG+AGG 0.505127 2:+17901919 None:intergenic
ATTGGTGTTGCCAATCTAGC+AGG 0.509235 2:-17902521 MsG0280007600.01.T01:CDS
AGTTATCTTCGGTGGTATAG+TGG 0.510123 2:-17900866 MsG0280007600.01.T01:CDS
TATGGTACTTCGTGTCCATA+TGG 0.512922 2:+17901886 None:intergenic
TCCTTCCTATGATGGAAAGA+TGG 0.519596 2:-17899756 MsG0280007600.01.T01:three_prime_UTR
AAGTAAGATCACAAAGCCTA+AGG 0.519858 2:+17900981 None:intergenic
GGTGGTAACAGCTTCGGTTG+AGG 0.520485 2:-17901911 MsG0280007600.01.T01:CDS
CACTGAAATGAAATTTAATG+TGG 0.520500 2:+17904983 None:intergenic
ATGTCTGGTTTGGTTGGTAC+AGG 0.521130 2:-17901042 MsG0280007600.01.T01:CDS
TTGAAGGAAAATGAAGCTTA+GGG 0.521409 2:+17902107 None:intergenic
GCAAAATATCATGTATGGCT+AGG 0.522260 2:-17902806 MsG0280007600.01.T01:CDS
TGAGGTTCTGCCAATCAAGA+AGG 0.523056 2:-17902304 MsG0280007600.01.T01:CDS
TATATTGTATATATAGTAGC+AGG 0.523200 2:-17899692 MsG0280007600.01.T01:three_prime_UTR
TCATACGGTGGTAACAGCTT+CGG 0.525366 2:-17901917 MsG0280007600.01.T01:CDS
TGCTGATGACTAATCTCTCT+CGG 0.525459 2:+17899665 None:intergenic
AATCATATTTAAGATATTGT+CGG 0.526904 2:-17899286 MsG0280007600.01.T01:three_prime_UTR
AATATGATTACCTTCAACGA+AGG 0.530107 2:+17899300 None:intergenic
TTTATTTATACCGATTTCAA+GGG 0.530400 2:-17902873 MsG0280007600.01.T01:CDS
ATTTACTATATAAATCCAGT+TGG 0.531760 2:-17900946 MsG0280007600.01.T01:CDS
ATTCTCCATCGTGTGAGGGA+TGG 0.535286 2:-17901617 MsG0280007600.01.T01:CDS
TGGCCTAGAGCCATACTGTA+TGG 0.535994 2:+17900708 None:intergenic
GTTGCAGAAACAACCCCAAA+TGG 0.541339 2:+17903863 None:intergenic
TTTATCTGTTCAGCCTCATA+CGG 0.542802 2:-17901932 MsG0280007600.01.T01:CDS
ACTTCTTTCGACCGTTGACA+TGG 0.543973 2:-17901531 MsG0280007600.01.T01:CDS
TCACCTTTCTTAGAAAGCAA+AGG 0.544082 2:+17904757 None:intergenic
GACTCTTCTATGTTATTGAG+TGG 0.545334 2:-17902751 MsG0280007600.01.T01:CDS
GCAACACTTGACTGAAGAGT+TGG 0.545843 2:+17899863 None:intergenic
ATGACTGTGGAAATGGAAGA+TGG 0.548444 2:+17899796 None:intergenic
GAAAACCTTATATTAGTGGC+AGG 0.550053 2:-17901680 MsG0280007600.01.T01:CDS
CTACCATACAGTATGGCTCT+AGG 0.555352 2:-17900711 MsG0280007600.01.T01:CDS
TGCATACCTAATTATTTCTG+GGG 0.557842 2:-17904246 MsG0280007600.01.T01:CDS
GATGTTGGTATTCTAGTTTG+TGG 0.558214 2:-17899890 MsG0280007600.01.T01:CDS
AGAAATAATTAGGTATGCAA+TGG 0.558493 2:+17904250 None:intergenic
ACACTTGACTGAAGAGTTGG+AGG 0.558505 2:+17899866 None:intergenic
TTGGTTATATGGTGGTACAA+AGG 0.558838 2:-17900922 MsG0280007600.01.T01:CDS
ATGGCCCCATTTCTCTGACA+TGG 0.558908 2:+17899916 None:intergenic
AATGAAATTTAATGTGGGGA+TGG 0.559532 2:+17904989 None:intergenic
ATGAAATTTAATGTGGGGAT+GGG 0.559541 2:+17904990 None:intergenic
GGGCTAGAAGAAACACTGAA+TGG 0.559675 2:+17902054 None:intergenic
ATACCTAATTATTTCTGGGG+AGG 0.562304 2:-17904243 MsG0280007600.01.T01:CDS
GGGAATTATCGTGGCTTCAG+TGG 0.567364 2:-17902080 MsG0280007600.01.T01:CDS
TGTTATTATCTGCAGGAAGA+GGG 0.567707 2:-17901123 MsG0280007600.01.T01:intron
CCAGACATTCCATAATCACT+AGG 0.567995 2:+17901057 None:intergenic
TTCAAGTTCGGGAATTATCG+TGG 0.568443 2:-17902089 MsG0280007600.01.T01:CDS
ATCTGTTCAGCCTCATACGG+TGG 0.568522 2:-17901929 MsG0280007600.01.T01:CDS
CAATAACATAGAAGAGTCCA+TGG 0.569129 2:+17902756 None:intergenic
AAATGGCTTAATTTCAGCAG+TGG 0.569517 2:-17904583 MsG0280007600.01.T01:CDS
TTTCCATTGGTGAATGGTGA+AGG 0.571228 2:+17899725 None:intergenic
AAAGCTCAAATTATAAATGA+GGG 0.572012 2:+17899244 None:intergenic
TCCATCTTTCCATCATAGGA+AGG 0.572392 2:+17899755 None:intergenic
TTAATCCAATCCCGCCCGAA+CGG 0.573743 2:+17902909 None:intergenic
AAAATATTTCTTGGTCGACA+AGG 0.574465 2:+17901590 None:intergenic
ACATCAACAAACCAGCTACA+AGG 0.574690 2:+17902489 None:intergenic
ATGTCAACGGTCGAAAGAAG+TGG 0.576179 2:+17901533 None:intergenic
TGTACATATCTTCGTCACTC+GGG 0.579762 2:-17901468 MsG0280007600.01.T01:CDS
TAATCACTAGGCATAGGAAA+GGG 0.580384 2:+17901069 None:intergenic
TTATGCTTGATCGATTTCTG+AGG 0.584264 2:-17902322 MsG0280007600.01.T01:CDS
TGACTGTGGAAATGGAAGAT+GGG 0.586819 2:+17899797 None:intergenic
GGATAAGTCCAATAACATCA+AGG 0.590579 2:-17900803 MsG0280007600.01.T01:CDS
TGGTAACAGCTTCGGTTGAG+GGG 0.591607 2:-17901909 MsG0280007600.01.T01:CDS
CCTTATCAATGGACCATTTG+GGG 0.593226 2:-17903876 MsG0280007600.01.T01:CDS
TCGGGAATCAGATCCTCCAT+TGG 0.593505 2:-17901450 MsG0280007600.01.T01:intron
AATGGTCCATTGATAAGGAT+CGG 0.593738 2:+17903881 None:intergenic
CTCTATAAGGAACTCTGAGT+GGG 0.593858 2:-17899523 MsG0280007600.01.T01:three_prime_UTR
ATGTACATATCTTCGTCACT+CGG 0.595377 2:-17901469 MsG0280007600.01.T01:CDS
AAATGGCTCTGTGGATCACA+AGG 0.597424 2:-17900764 MsG0280007600.01.T01:CDS
ACAGATTGTTTCCATGTCAA+CGG 0.597655 2:+17901520 None:intergenic
ATTCCATAATCACTAGGCAT+AGG 0.598212 2:+17901063 None:intergenic
ACTGAAATGAAATTTAATGT+GGG 0.600368 2:+17904984 None:intergenic
CGATATTCTCCATCGTGTGA+GGG 0.600683 2:-17901621 MsG0280007600.01.T01:CDS
TCGCTCAATATAGCAAGGAA+AGG 0.600792 2:+17901641 None:intergenic
GTTATTGAGTGGCTAATGGA+AGG 0.601090 2:-17902740 MsG0280007600.01.T01:CDS
GCGATATTCTCCATCGTGTG+AGG 0.601408 2:-17901622 MsG0280007600.01.T01:CDS
ATAATCACTAGGCATAGGAA+AGG 0.604094 2:+17901068 None:intergenic
GGATGGGATAATATAGTAGA+GGG 0.606266 2:+17905006 None:intergenic
ATATGATTACCTTCAACGAA+GGG 0.606366 2:+17899301 None:intergenic
GGGATGGGATAATATAGTAG+AGG 0.606426 2:+17905005 None:intergenic
GGTTCTTGGCAAATGGACCG+GGG 0.607531 2:-17901995 MsG0280007600.01.T01:CDS
GCTACTACTTGTAGTCTGCA+TGG 0.612275 2:-17900899 MsG0280007600.01.T01:CDS
TCATCGAGGTGCCTTCCTTG+TGG 0.616387 2:-17902266 MsG0280007600.01.T01:CDS
AAGAAAGGTGATGAAACTGA+TGG 0.618638 2:-17904745 MsG0280007600.01.T01:CDS
CGTTCGCACTCCAGGAAGCG+AGG 0.620245 2:+17902460 None:intergenic
CAGTTGGATTGGTTATATGG+TGG 0.622983 2:-17900930 MsG0280007600.01.T01:CDS
GAATATCGCTCAATATAGCA+AGG 0.623134 2:+17901636 None:intergenic
GACTGTGGAAATGGAAGATG+GGG 0.624675 2:+17899798 None:intergenic
CGAAAGGGATATCTATGAAG+CGG 0.625285 2:+17902837 None:intergenic
TGTATTACCTGTGATTCCAA+AGG 0.625397 2:+17904555 None:intergenic
TTATTTATACCGATTTCAAG+GGG 0.626114 2:-17902872 MsG0280007600.01.T01:CDS
AGAGATCAAAGCTATGACTG+TGG 0.626232 2:+17899783 None:intergenic
TTACCATCAGAATCTGTGCA+TGG 0.626896 2:-17904616 MsG0280007600.01.T01:CDS
GCAGGTGTAGTTATCTTCGG+TGG 0.630037 2:-17900874 MsG0280007600.01.T01:CDS
ACTCTATAAGGAACTCTGAG+TGG 0.632677 2:-17899524 MsG0280007600.01.T01:three_prime_UTR
ACCATTTCCACAGTGCCACA+AGG 0.634007 2:+17902251 None:intergenic
AATCCATGCACAGATTCTGA+TGG 0.634212 2:+17904613 None:intergenic
AAAGTTAGACTAACCAATGG+AGG 0.635530 2:+17901437 None:intergenic
TAAGGATCGGAAAAGTCCAT+AGG 0.639419 2:+17903894 None:intergenic
GTTCTTGGCAAATGGACCGG+GGG 0.642988 2:-17901994 MsG0280007600.01.T01:CDS
TTTCCACAGTGCCACAAGGA+AGG 0.647154 2:+17902255 None:intergenic
AGTTATCATTTAGAGCCAAG+AGG 0.648631 2:-17903751 MsG0280007600.01.T01:intron
ATACCTTCACCATTCACCAA+TGG 0.648646 2:-17899728 MsG0280007600.01.T01:three_prime_UTR
TTTACTTTATCAGAAAAGCG+TGG 0.652331 2:+17901497 None:intergenic
AAATGGGGCCATGTTGATGT+TGG 0.654368 2:-17899905 MsG0280007600.01.T01:CDS
TTAAGAGAAAGAATCACTGA+AGG 0.655743 2:-17901970 MsG0280007600.01.T01:CDS
GTGCCTTCCTTGTGGCACTG+TGG 0.660437 2:-17902258 MsG0280007600.01.T01:CDS
AATTGAGCAAAATGGCTCTG+TGG 0.663882 2:-17900773 MsG0280007600.01.T01:CDS
GAATCCATGTCAGAGAAATG+GGG 0.666449 2:-17899920 MsG0280007600.01.T01:CDS
GTTTCCCATCCCTCACACGA+TGG 0.667021 2:+17901612 None:intergenic
CTAGAATACCAACATCAACA+TGG 0.673063 2:+17899897 None:intergenic
AACCTTATATTAGTGGCAGG+CGG 0.680461 2:-17901677 MsG0280007600.01.T01:CDS
TTCTTGGCAAATGGACCGGG+GGG 0.692411 2:-17901993 MsG0280007600.01.T01:CDS
CTGAAATGAAATTTAATGTG+GGG 0.708329 2:+17904985 None:intergenic
ATGGCTAGGACACCTCACAA+TGG 0.732994 2:-17902792 MsG0280007600.01.T01:CDS
CAGTAAATGTAATCTCATCG+AGG 0.756992 2:-17902280 MsG0280007600.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAAAATGTCATATTTTTAT+CGG - Chr2:17903983-17904002 MsG0280007600.01.T01:intron 10.0%
!!! AAGAAATATTTTAATTGTTT+GGG - Chr2:17902701-17902720 MsG0280007600.01.T01:intron 10.0%
!!! TTTCTTTTATTAGTTTATTT+GGG + Chr2:17900696-17900715 None:intergenic 10.0%
!! AAAAGTTAAAACTCTTAAAA+TGG + Chr2:17901118-17901137 None:intergenic 15.0%
!! AAAGAAAAACAAGTTTATAA+GGG + Chr2:17904854-17904873 None:intergenic 15.0%
!! AAAGTTAAAACTCTTAAAAT+GGG + Chr2:17901117-17901136 None:intergenic 15.0%
!! AATAATATGTGCTTATAATT+TGG + Chr2:17904891-17904910 None:intergenic 15.0%
!! ATTATGTAAAGATAAGTAAA+TGG + Chr2:17901704-17901723 None:intergenic 15.0%
!! CAAACAATTAAAATATTTCT+TGG + Chr2:17902702-17902721 None:intergenic 15.0%
!! CAATAAAGATTATGTATAAT+TGG + Chr2:17901875-17901894 None:intergenic 15.0%
!! TAAAGAAAAACAAGTTTATA+AGG + Chr2:17904855-17904874 None:intergenic 15.0%
!! TAATGATAATATTCACATAA+AGG + Chr2:17904798-17904817 None:intergenic 15.0%
!! TTACTTATCTTTACATAATT+TGG - Chr2:17901705-17901724 MsG0280007600.01.T01:intron 15.0%
!!! AATCATATTTAAGATATTGT+CGG - Chr2:17904994-17905013 MsG0280007600.01.T01:five_prime_UTR 15.0%
!!! AATTTCTGAAAATAAAGAAA+TGG + Chr2:17900570-17900589 None:intergenic 15.0%
!!! ATAGTAAGATACTTTTTTTT+TGG - Chr2:17903873-17903892 MsG0280007600.01.T01:CDS 15.0%
!!! CAAGAAATATTTTAATTGTT+TGG - Chr2:17902700-17902719 MsG0280007600.01.T01:intron 15.0%
!!! CTTTTTAATTTTTCAGTTTA+TGG + Chr2:17900862-17900881 None:intergenic 15.0%
!!! GTTTCTTTTATTAGTTTATT+TGG + Chr2:17900697-17900716 None:intergenic 15.0%
!! AAACACATAAAAATAGTAAG+TGG + Chr2:17899413-17899432 None:intergenic 20.0%
!! AAACATACAATTAATTGAAC+TGG + Chr2:17904258-17904277 None:intergenic 20.0%
!! AAATAAGTATACTTACTTTG+TGG + Chr2:17902065-17902084 None:intergenic 20.0%
!! AACACATAAAAATAGTAAGT+GGG + Chr2:17899412-17899431 None:intergenic 20.0%
!! AAGTTAAAACTCTTAAAATG+GGG + Chr2:17901116-17901135 None:intergenic 20.0%
!! AATATTAAGGTAGAAATATG+AGG + Chr2:17899352-17899371 None:intergenic 20.0%
!! AATGATTCATAAGAATGAAT+TGG + Chr2:17903812-17903831 None:intergenic 20.0%
!! ACATAATAATGAAACATGAT+TGG + Chr2:17900153-17900172 None:intergenic 20.0%
!! ACTGAAATGAAATTTAATGT+GGG + Chr2:17899299-17899318 None:intergenic 20.0%
!! ATATGATAAGTTAATTTACC+TGG - Chr2:17901301-17901320 MsG0280007600.01.T01:intron 20.0%
!! ATGATTCATAAGAATGAATT+GGG + Chr2:17903811-17903830 None:intergenic 20.0%
!! ATTCCAATATGAATTGAAAT+TGG - Chr2:17900762-17900781 MsG0280007600.01.T01:CDS 20.0%
!! ATTTACTATATAAATCCAGT+TGG - Chr2:17903334-17903353 MsG0280007600.01.T01:intron 20.0%
!! TAAAGAAAAAAATTCATGCA+TGG + Chr2:17900625-17900644 None:intergenic 20.0%
!! TATATTGTATATATAGTAGC+AGG - Chr2:17904588-17904607 MsG0280007600.01.T01:CDS 20.0%
!! TATATTGTCACTGTTATATA+TGG + Chr2:17902122-17902141 None:intergenic 20.0%
!! TCAAGCATAAAAAGAAATAT+TGG + Chr2:17901948-17901967 None:intergenic 20.0%
!! TCTTAATATCAATACATGAA+AGG - Chr2:17903639-17903658 MsG0280007600.01.T01:intron 20.0%
!! TCTTTAATGAAAACAAACTA+GGG + Chr2:17901002-17901021 None:intergenic 20.0%
!! TTATTAGAATGGAAAGATAT+TGG - Chr2:17901741-17901760 MsG0280007600.01.T01:intron 20.0%
!! TTCCATAATCTTCATTATAT+GGG - Chr2:17899624-17899643 MsG0280007600.01.T01:three_prime_UTR 20.0%
!! TTCTACCTTAATATTATCAT+GGG - Chr2:17899357-17899376 MsG0280007600.01.T01:three_prime_UTR 20.0%
!! TTTCCATAATCTTCATTATA+TGG - Chr2:17899623-17899642 MsG0280007600.01.T01:three_prime_UTR 20.0%
!! TTTCTACCTTAATATTATCA+TGG - Chr2:17899356-17899375 MsG0280007600.01.T01:three_prime_UTR 20.0%
!!! AAAAATCAATTTGAAGCAAA+AGG + Chr2:17901178-17901197 None:intergenic 20.0%
!!! AATATTTTGCACTTGTAATA+TGG - Chr2:17904650-17904669 MsG0280007600.01.T01:CDS 20.0%
!!! ATGCAAATTACTTTGTTTAA+TGG - Chr2:17900599-17900618 MsG0280007600.01.T01:intron 20.0%
!!! GAAATTAATTCGAGTTTAAT+TGG + Chr2:17900284-17900303 None:intergenic 20.0%
!!! TTTATTTATACCGATTTCAA+GGG - Chr2:17901407-17901426 MsG0280007600.01.T01:intron 20.0%
!!! TTTTATTTATACCGATTTCA+AGG - Chr2:17901406-17901425 MsG0280007600.01.T01:intron 20.0%
!!! TTTTGATATTGTTTTTGACA+TGG - Chr2:17900320-17900339 MsG0280007600.01.T01:intron 20.0%
!!! TTTTTTGGCATATGTTATTT+GGG - Chr2:17900461-17900480 MsG0280007600.01.T01:intron 20.0%
!!! TTTTTTTGGCATATGTTATT+TGG - Chr2:17900460-17900479 MsG0280007600.01.T01:intron 20.0%
! AAACAAGTTTATAAGGGTTA+TGG + Chr2:17904848-17904867 None:intergenic 25.0%
! AAATTACATGATCATTGCAA+AGG + Chr2:17901268-17901287 None:intergenic 25.0%
! AGAAAAATATTTGCAAACTC+TGG + Chr2:17900955-17900974 None:intergenic 25.0%
! AGAAATAATTAGGTATGCAA+TGG + Chr2:17900033-17900052 None:intergenic 25.0%
! ATGAGGATCATAAAAAATGT+TGG + Chr2:17899335-17899354 None:intergenic 25.0%
! ATTGCATACCTAATTATTTC+TGG - Chr2:17900032-17900051 MsG0280007600.01.T01:intron 25.0%
! CACATTAAATTTCATTTCAG+TGG - Chr2:17899298-17899317 MsG0280007600.01.T01:three_prime_UTR 25.0%
! CACTGAAATGAAATTTAATG+TGG + Chr2:17899300-17899319 None:intergenic 25.0%
! CATAATCTTTATTGTGTTCA+TGG - Chr2:17901881-17901900 MsG0280007600.01.T01:CDS 25.0%
! CCTAACTTTGAATAATAGAA+AGG - Chr2:17902988-17903007 MsG0280007600.01.T01:intron 25.0%
! CCTTTCTATTATTCAAAGTT+AGG + Chr2:17902991-17903010 None:intergenic 25.0%
! CTCTTCTACATTGTAAAAAA+GGG + Chr2:17904303-17904322 None:intergenic 25.0%
! CTCTTTAATGAAAACAAACT+AGG + Chr2:17901003-17901022 None:intergenic 25.0%
! CTGAAATGAAATTTAATGTG+GGG + Chr2:17899298-17899317 None:intergenic 25.0%
! GAAAAAAAGTTAAGTAAACC+AGG + Chr2:17901322-17901341 None:intergenic 25.0%
! GGAAAACAATAAAAACATTG+TGG + Chr2:17899385-17899404 None:intergenic 25.0%
! TGAGGATCATAAAAAATGTT+GGG + Chr2:17899334-17899353 None:intergenic 25.0%
! TTAAAACAAGAATCTTGACA+TGG - Chr2:17901136-17901155 MsG0280007600.01.T01:intron 25.0%
! TTTATCAACCTTGATGTTAT+TGG + Chr2:17903488-17903507 None:intergenic 25.0%
!! AAGGTACTATAATCCTTAAA+AGG - Chr2:17904733-17904752 MsG0280007600.01.T01:CDS 25.0%
!! AGTACCTTTTTATCTTACAA+TGG + Chr2:17904721-17904740 None:intergenic 25.0%
!! AGTTAGCTTAAAATCTACTT+TGG + Chr2:17902509-17902528 None:intergenic 25.0%
!! ATTTGATTGTTATTATCTGC+AGG - Chr2:17903150-17903169 MsG0280007600.01.T01:intron 25.0%
!! GATATCTGTAGACATATTTT+AGG + Chr2:17900194-17900213 None:intergenic 25.0%
!! GTTGATAAAATTGAGCAAAA+TGG - Chr2:17903499-17903518 MsG0280007600.01.T01:intron 25.0%
!! TGTGTTCATTTTGTTCTATT+AGG - Chr2:17902574-17902593 MsG0280007600.01.T01:intron 25.0%
!! TTGCATACCTAATTATTTCT+GGG - Chr2:17900033-17900052 MsG0280007600.01.T01:intron 25.0%
!!! AATCTTGTTTTTTCACTATG+TGG - Chr2:17899919-17899938 MsG0280007600.01.T01:CDS 25.0%
!!! ATGTGATTTTTTCCATCTAA+AGG + Chr2:17902250-17902269 None:intergenic 25.0%
!!! CATTGGAATTGTCATTTTTT+TGG - Chr2:17900446-17900465 MsG0280007600.01.T01:intron 25.0%
!!! CTTTTGAATGTTTAAAACCA+CGG - Chr2:17903106-17903125 MsG0280007600.01.T01:intron 25.0%
!!! GAAAATATACCTTTAAAGTC+TGG + Chr2:17903595-17903614 None:intergenic 25.0%
!!! TAATTTTTCAGTTTATGGAG+AGG + Chr2:17900857-17900876 None:intergenic 25.0%
!!! TGAGTTATTTCTTGTAACTA+TGG - Chr2:17899477-17899496 MsG0280007600.01.T01:three_prime_UTR 25.0%
!!! TGATTTCTTGCTTTTTGTTT+TGG - Chr2:17899766-17899785 MsG0280007600.01.T01:exon 25.0%
!!! TGTGATTTTTTCCATCTAAA+GGG + Chr2:17902249-17902268 None:intergenic 25.0%
!!! TTATTTATACCGATTTCAAG+GGG - Chr2:17901408-17901427 MsG0280007600.01.T01:intron 25.0%
AAAATATTTCTTGGTCGACA+AGG + Chr2:17902693-17902712 None:intergenic 30.0%
AAGTTAACTACCATACAGTA+TGG - Chr2:17903562-17903581 MsG0280007600.01.T01:intron 30.0%
AATATGATTACCTTCAACGA+AGG + Chr2:17904983-17905002 None:intergenic 30.0%
AATGAAATTTAATGTGGGGA+TGG + Chr2:17899294-17899313 None:intergenic 30.0%
AGCATAGAAGTCTCAAAATT+TGG + Chr2:17900899-17900918 None:intergenic 30.0%
AGCCCATATAATGAAGATTA+TGG + Chr2:17899629-17899648 None:intergenic 30.0%
ATATGATTACCTTCAACGAA+GGG + Chr2:17904982-17905001 None:intergenic 30.0%
ATCAAATCGATATGAATCTC+TGG - Chr2:17903729-17903748 MsG0280007600.01.T01:intron 30.0%
ATCCTTAAAAGGACTCTATA+AGG - Chr2:17904744-17904763 MsG0280007600.01.T01:CDS 30.0%
ATGAAATTTAATGTGGGGAT+GGG + Chr2:17899293-17899312 None:intergenic 30.0%
ATGCTGCAAAATATCATGTA+TGG - Chr2:17901469-17901488 MsG0280007600.01.T01:CDS 30.0%
ATTAATCCAATGCACAGATA+AGG + Chr2:17900098-17900117 None:intergenic 30.0%
CAGTCCATTGTAAGATAAAA+AGG - Chr2:17904714-17904733 MsG0280007600.01.T01:CDS 30.0%
CCAATATGAATTGAAATTGG+AGG - Chr2:17900765-17900784 MsG0280007600.01.T01:CDS 30.0%
CCTCCAATTTCAATTCATAT+TGG + Chr2:17900768-17900787 None:intergenic 30.0%
CCTCTTCTACATTGTAAAAA+AGG + Chr2:17904304-17904323 None:intergenic 30.0%
CGATTCACGATTTGAAAAAT+TGG - Chr2:17904035-17904054 MsG0280007600.01.T01:intron 30.0%
CTATATAAATCCAGTTGGAT+TGG - Chr2:17903339-17903358 MsG0280007600.01.T01:intron 30.0%
CTGAACACGTGTTTATAAAT+GGG - Chr2:17901047-17901066 MsG0280007600.01.T01:CDS 30.0%
GCATAGAAGTCTCAAAATTT+GGG + Chr2:17900898-17900917 None:intergenic 30.0%
GTACGAAAACCTTATATTAG+TGG - Chr2:17902596-17902615 MsG0280007600.01.T01:intron 30.0%
TAAAAATAGTAAGTGGGAGA+AGG + Chr2:17899406-17899425 None:intergenic 30.0%
TAATCAACAACTACCTTTGA+AGG + Chr2:17901662-17901681 None:intergenic 30.0%
TAGAAAGTTAGACTAACCAA+TGG + Chr2:17902849-17902868 None:intergenic 30.0%
TAGTGAGATTAAGATAACAC+TGG - Chr2:17900730-17900749 MsG0280007600.01.T01:CDS 30.0%
TATGTAGAAATCACATACTC+AGG + Chr2:17900071-17900090 None:intergenic 30.0%
TCCATTCTAATAACTGCAAA+GGG + Chr2:17901734-17901753 None:intergenic 30.0%
TCTGAACACGTGTTTATAAA+TGG - Chr2:17901046-17901065 MsG0280007600.01.T01:CDS 30.0%
TGAACACGTGTTTATAAATG+GGG - Chr2:17901048-17901067 MsG0280007600.01.T01:CDS 30.0%
TGGAACCCATGATAATATTA+AGG + Chr2:17899365-17899384 None:intergenic 30.0%
TGTAAAAAAGGGACTAATAC+TGG + Chr2:17904292-17904311 None:intergenic 30.0%
TGTAGAAGAGGTTACTAATA+TGG - Chr2:17904313-17904332 MsG0280007600.01.T01:intron 30.0%
TGTTATCCTAAATCCTTCAA+AGG - Chr2:17901646-17901665 MsG0280007600.01.T01:CDS 30.0%
TTAAGAGAAAGAATCACTGA+AGG - Chr2:17902310-17902329 MsG0280007600.01.T01:CDS 30.0%
TTCCATTCTAATAACTGCAA+AGG + Chr2:17901735-17901754 None:intergenic 30.0%
TTGAAGGAAAATGAAGCTTA+GGG + Chr2:17902176-17902195 None:intergenic 30.0%
TTTACTTTATCAGAAAAGCG+TGG + Chr2:17902786-17902805 None:intergenic 30.0%
TTTCTATGCTTATACTATGC+AGG - Chr2:17900485-17900504 MsG0280007600.01.T01:intron 30.0%
! ATATATGCATGCTTTTCCAT+TGG + Chr2:17904571-17904590 None:intergenic 30.0%
! CAAAGGTAGTTGTTGATTAT+TGG - Chr2:17901663-17901682 MsG0280007600.01.T01:CDS 30.0%
! GTTTTTGACATGGATTTTGA+TGG - Chr2:17900330-17900349 MsG0280007600.01.T01:intron 30.0%
! TATGTCATTTCATCTACCTT+AGG - Chr2:17903283-17903302 MsG0280007600.01.T01:intron 30.0%
! TTCCTTATAGAGTCCTTTTA+AGG + Chr2:17904749-17904768 None:intergenic 30.0%
! TTTTATCGGTAGTGTATCTT+AGG - Chr2:17903997-17904016 MsG0280007600.01.T01:intron 30.0%
!! TGCATACCTAATTATTTCTG+GGG - Chr2:17900034-17900053 MsG0280007600.01.T01:intron 30.0%
!! TTTCTTCGATTTGTGTCTTT+TGG - Chr2:17902884-17902903 MsG0280007600.01.T01:CDS 30.0%
!!! CCTTTTTTACAATGTAGAAG+AGG - Chr2:17904301-17904320 MsG0280007600.01.T01:CDS 30.0%
!!! CTTGCTTTTTGTTTTGGTTT+TGG - Chr2:17899772-17899791 MsG0280007600.01.T01:exon 30.0%
AAAGTTAGACTAACCAATGG+AGG + Chr2:17902846-17902865 None:intergenic 35.0%
AAATGGCTTAATTTCAGCAG+TGG - Chr2:17899697-17899716 MsG0280007600.01.T01:three_prime_UTR 35.0%
AAGAAAGGTGATGAAACTGA+TGG - Chr2:17899535-17899554 MsG0280007600.01.T01:three_prime_UTR 35.0%
AAGTAAGATCACAAAGCCTA+AGG + Chr2:17903302-17903321 None:intergenic 35.0%
AATGGTCCATTGATAAGGAT+CGG + Chr2:17900402-17900421 None:intergenic 35.0%
ACAGATTGTTTCCATGTCAA+CGG + Chr2:17902763-17902782 None:intergenic 35.0%
ACCATATCACTTGATGTAAG+TGG - Chr2:17902411-17902430 MsG0280007600.01.T01:CDS 35.0%
AGAAATGCAATTGCAAGAAC+AGG + Chr2:17900008-17900027 None:intergenic 35.0%
ATAATCACTAGGCATAGGAA+AGG + Chr2:17903215-17903234 None:intergenic 35.0%
ATCCTTATCAATGGACCATT+TGG - Chr2:17900402-17900421 MsG0280007600.01.T01:intron 35.0%
ATGTACATATCTTCGTCACT+CGG - Chr2:17902811-17902830 MsG0280007600.01.T01:CDS 35.0%
ATTCCATAATCACTAGGCAT+AGG + Chr2:17903220-17903239 None:intergenic 35.0%
CAATAACATAGAAGAGTCCA+TGG + Chr2:17901527-17901546 None:intergenic 35.0%
CAGTAAATGTAATCTCATCG+AGG - Chr2:17902000-17902019 MsG0280007600.01.T01:CDS 35.0%
CATTCTAATAACTGCAAAGG+GGG + Chr2:17901732-17901751 None:intergenic 35.0%
CATTTACTGTCCTTCTTGAT+TGG + Chr2:17901989-17902008 None:intergenic 35.0%
CCATTCTAATAACTGCAAAG+GGG + Chr2:17901733-17901752 None:intergenic 35.0%
CGATTCACGATTTGAAAAGT+AGG - Chr2:17904139-17904158 MsG0280007600.01.T01:intron 35.0%
CTAGAATACCAACATCAACA+TGG + Chr2:17904386-17904405 None:intergenic 35.0%
CTATGTTATTGAGTGGCTAA+TGG - Chr2:17901536-17901555 MsG0280007600.01.T01:CDS 35.0%
CTTGAAGGAAAATGAAGCTT+AGG + Chr2:17902177-17902196 None:intergenic 35.0%
GAAAACCTTATATTAGTGGC+AGG - Chr2:17902600-17902619 MsG0280007600.01.T01:intron 35.0%
GAAGACTCACTTCTTGAATT+AGG + Chr2:17901569-17901588 None:intergenic 35.0%
GAATATCGCTCAATATAGCA+AGG + Chr2:17902647-17902666 None:intergenic 35.0%
GACTCTTCTATGTTATTGAG+TGG - Chr2:17901529-17901548 MsG0280007600.01.T01:CDS 35.0%
GAGTAAAAATCACCATTGTG+AGG + Chr2:17901503-17901522 None:intergenic 35.0%
GCAAAATATCATGTATGGCT+AGG - Chr2:17901474-17901493 MsG0280007600.01.T01:CDS 35.0%
GGAAAAGCAAAGTTCTCTAA+AGG - Chr2:17903456-17903475 MsG0280007600.01.T01:intron 35.0%
GGATAAGTCCAATAACATCA+AGG - Chr2:17903477-17903496 MsG0280007600.01.T01:intron 35.0%
GGATGGGATAATATAGTAGA+GGG + Chr2:17899277-17899296 None:intergenic 35.0%
GTAGCTGACACAACAAAATT+AGG + Chr2:17899580-17899599 None:intergenic 35.0%
GTCGGTAATACTTAAGACAA+AGG + Chr2:17901201-17901220 None:intergenic 35.0%
TAATCACTAGGCATAGGAAA+GGG + Chr2:17903214-17903233 None:intergenic 35.0%
TACATGAAAGGACTATTGTG+TGG - Chr2:17903651-17903670 MsG0280007600.01.T01:intron 35.0%
TACTTTCCTTATCTGTGCAT+TGG - Chr2:17900089-17900108 MsG0280007600.01.T01:intron 35.0%
TCACCTTTCTTAGAAAGCAA+AGG + Chr2:17899526-17899545 None:intergenic 35.0%
TCATTAAGGTTCTTGGCAAA+TGG - Chr2:17902278-17902297 MsG0280007600.01.T01:CDS 35.0%
TCCATGCTAATGACTATTGT+CGG + Chr2:17901219-17901238 None:intergenic 35.0%
TCCTTATCAATGGACCATTT+GGG - Chr2:17900403-17900422 MsG0280007600.01.T01:intron 35.0%
TCGTGAATCGAATCTTACTA+TGG + Chr2:17904025-17904044 None:intergenic 35.0%
TGAATCCATGTCAGAGAAAT+GGG - Chr2:17904359-17904378 MsG0280007600.01.T01:intron 35.0%
TGATTATGGAATGTCTGGTT+TGG - Chr2:17903228-17903247 MsG0280007600.01.T01:intron 35.0%
TGCAAAATAAGCTCAAAGCA+AGG + Chr2:17904096-17904115 None:intergenic 35.0%
TGGTTATATGGTGGTACAAA+GGG - Chr2:17903359-17903378 MsG0280007600.01.T01:intron 35.0%
TGTATTACCTGTGATTCCAA+AGG + Chr2:17899728-17899747 None:intergenic 35.0%
TGTCTGACTACACTAAGTTT+AGG + Chr2:17903836-17903855 None:intergenic 35.0%
TGTTATTATCTGCAGGAAGA+GGG - Chr2:17903157-17903176 MsG0280007600.01.T01:intron 35.0%
TTCATTAAAGAGTCCCACAT+CGG - Chr2:17901011-17901030 MsG0280007600.01.T01:CDS 35.0%
TTCTAAACTGTAGTACCTCT+TGG + Chr2:17900547-17900566 None:intergenic 35.0%
TTGAATCCATGTCAGAGAAA+TGG - Chr2:17904358-17904377 MsG0280007600.01.T01:intron 35.0%
TTGACAGTGCTTATTAACCA+CGG - Chr2:17900823-17900842 MsG0280007600.01.T01:CDS 35.0%
TTGGTTATATGGTGGTACAA+AGG - Chr2:17903358-17903377 MsG0280007600.01.T01:intron 35.0%
TTGTTGTGTCAGCTACTAAA+TGG - Chr2:17899584-17899603 MsG0280007600.01.T01:three_prime_UTR 35.0%
TTTATCTGTTCAGCCTCATA+CGG - Chr2:17902348-17902367 MsG0280007600.01.T01:CDS 35.0%
TTTCCTATGCCTAGTGATTA+TGG - Chr2:17903214-17903233 MsG0280007600.01.T01:intron 35.0%
! AAGGGACAGAGTGATTTTAT+TGG + Chr2:17903196-17903215 None:intergenic 35.0%
! ACTTTTCCGATCCTTATCAA+TGG - Chr2:17900393-17900412 MsG0280007600.01.T01:intron 35.0%
! AGTCCTTTGCTTTCTAAGAA+AGG - Chr2:17899520-17899539 MsG0280007600.01.T01:three_prime_UTR 35.0%
! AGTTATCATTTAGAGCCAAG+AGG - Chr2:17900529-17900548 MsG0280007600.01.T01:intron 35.0%
! ATGGTGATTTTTACTCTCCA+TGG - Chr2:17901507-17901526 MsG0280007600.01.T01:CDS 35.0%
! ATTTTGCAGCATGTTCGAAA+GGG + Chr2:17901461-17901480 None:intergenic 35.0%
! CAACTACCTTTGAAGGATTT+AGG + Chr2:17901655-17901674 None:intergenic 35.0%
! TATTTTGCAGCATGTTCGAA+AGG + Chr2:17901462-17901481 None:intergenic 35.0%
! TCACATTGCTGTTCTCATTA+AGG - Chr2:17902264-17902283 MsG0280007600.01.T01:CDS 35.0%
! TGCATGGATTGTTCACAAAA+TGG - Chr2:17899680-17899699 MsG0280007600.01.T01:three_prime_UTR 35.0%
! TTATGCTTGATCGATTTCTG+AGG - Chr2:17901958-17901977 MsG0280007600.01.T01:CDS 35.0%
! TTGCACATGTTGGAGATTTT+GGG - Chr2:17901345-17901364 MsG0280007600.01.T01:intron 35.0%
! TTGTTATTATCTGCAGGAAG+AGG - Chr2:17903156-17903175 MsG0280007600.01.T01:intron 35.0%
!! ATACCTAATTATTTCTGGGG+AGG - Chr2:17900037-17900056 MsG0280007600.01.T01:intron 35.0%
!! ATCCAGTTGGATTGGTTATA+TGG - Chr2:17903347-17903366 MsG0280007600.01.T01:intron 35.0%
!! CGGTTTTATAAGGATGAGTT+AGG - Chr2:17901090-17901109 MsG0280007600.01.T01:CDS 35.0%
!! CTTCATTTTCCTTCAAGTTC+GGG - Chr2:17902180-17902199 MsG0280007600.01.T01:intron 35.0%
!! GATGTTGGTATTCTAGTTTG+TGG - Chr2:17904390-17904409 MsG0280007600.01.T01:intron 35.0%
!! GCTTCATTTTCCTTCAAGTT+CGG - Chr2:17902179-17902198 MsG0280007600.01.T01:intron 35.0%
!!! ATTTTGAGACTTCTATGCTG+AGG - Chr2:17900900-17900919 MsG0280007600.01.T01:CDS 35.0%
!!! TGGCGACTTTATTTTTGCTA+TGG - Chr2:17901914-17901933 MsG0280007600.01.T01:CDS 35.0%
!!! TTTATTTTTGCTATGGCTGC+TGG - Chr2:17901921-17901940 MsG0280007600.01.T01:CDS 35.0%
!!! TTTTTTCAGCTTGCACATGT+TGG - Chr2:17901335-17901354 MsG0280007600.01.T01:intron 35.0%
AAACTACTTGTGTGTTGTGC+AGG - Chr2:17899957-17899976 MsG0280007600.01.T01:intron 40.0%
AAAGTCCATAGGCGAAATCT+TGG + Chr2:17900378-17900397 None:intergenic 40.0%
AAATGGAAGATGGGGTGATA+AGG + Chr2:17904477-17904496 None:intergenic 40.0%
AACCAGTCTTTGGTACGTTA+AGG - Chr2:17900654-17900673 MsG0280007600.01.T01:intron 40.0%
AACCTCTTGAAACCAGTCTT+TGG - Chr2:17900644-17900663 MsG0280007600.01.T01:intron 40.0%
AACCTTATATTAGTGGCAGG+CGG - Chr2:17902603-17902622 MsG0280007600.01.T01:intron 40.0%
AATCCATGCACAGATTCTGA+TGG + Chr2:17899670-17899689 None:intergenic 40.0%
ACATCAACAAACCAGCTACA+AGG + Chr2:17901794-17901813 None:intergenic 40.0%
ACCGACAATAGTCATTAGCA+TGG - Chr2:17901215-17901234 MsG0280007600.01.T01:intron 40.0%
ACGATAATTCCCGAACTTGA+AGG + Chr2:17902192-17902211 None:intergenic 40.0%
ACTCTATAAGGAACTCTGAG+TGG - Chr2:17904756-17904775 MsG0280007600.01.T01:CDS 40.0%
AGAACAGATCCCCTTGAAAT+CGG + Chr2:17901420-17901439 None:intergenic 40.0%
AGAGATCAAAGCTATGACTG+TGG + Chr2:17904500-17904519 None:intergenic 40.0%
AGTATCCAAGATTTCGCCTA+TGG - Chr2:17900370-17900389 MsG0280007600.01.T01:intron 40.0%
AGTTATCTTCGGTGGTATAG+TGG - Chr2:17903414-17903433 MsG0280007600.01.T01:intron 40.0%
ATACCTTCACCATTCACCAA+TGG - Chr2:17904552-17904571 MsG0280007600.01.T01:intron 40.0%
ATGACTGTGGAAATGGAAGA+TGG + Chr2:17904487-17904506 None:intergenic 40.0%
CAAAGCTATGACTGTGGAAA+TGG + Chr2:17904494-17904513 None:intergenic 40.0%
CACCATATAACCAATCCAAC+TGG + Chr2:17903352-17903371 None:intergenic 40.0%
CAGTTTATGGAGAGGATTGT+TGG + Chr2:17900849-17900868 None:intergenic 40.0%
CCAGACATTCCATAATCACT+AGG + Chr2:17903226-17903245 None:intergenic 40.0%
CCCCTTTGCAGTTATTAGAA+TGG - Chr2:17901730-17901749 MsG0280007600.01.T01:intron 40.0%
CCTAGTGATTATGGAATGTC+TGG - Chr2:17903223-17903242 MsG0280007600.01.T01:intron 40.0%
CCTTATCAATGGACCATTTG+GGG - Chr2:17900404-17900423 MsG0280007600.01.T01:intron 40.0%
CGAAAGGGATATCTATGAAG+CGG + Chr2:17901446-17901465 None:intergenic 40.0%
CTATATGTTCCCTTCGTTGA+AGG - Chr2:17904970-17904989 MsG0280007600.01.T01:five_prime_UTR 40.0%
CTCTATAAGGAACTCTGAGT+GGG - Chr2:17904757-17904776 MsG0280007600.01.T01:CDS 40.0%
GAATCCATGTCAGAGAAATG+GGG - Chr2:17904360-17904379 MsG0280007600.01.T01:intron 40.0%
GATCCTCCCCAGAAATAATT+AGG + Chr2:17900043-17900062 None:intergenic 40.0%
GCCACTTACATCAAGTGATA+TGG + Chr2:17902415-17902434 None:intergenic 40.0%
GCTGTTCTCATTAAGGTTCT+TGG - Chr2:17902271-17902290 MsG0280007600.01.T01:CDS 40.0%
GGGATGGGATAATATAGTAG+AGG + Chr2:17899278-17899297 None:intergenic 40.0%
GTCTTCCATCTTTCCATCAT+AGG + Chr2:17904532-17904551 None:intergenic 40.0%
GTTATTGAGTGGCTAATGGA+AGG - Chr2:17901540-17901559 MsG0280007600.01.T01:CDS 40.0%
GTTGCAGGTGTAGTTATCTT+CGG - Chr2:17903403-17903422 MsG0280007600.01.T01:intron 40.0%
GTTTCTTCTAGCCCTTTAGA+TGG - Chr2:17902235-17902254 MsG0280007600.01.T01:CDS 40.0%
TAAGGATCGGAAAAGTCCAT+AGG + Chr2:17900389-17900408 None:intergenic 40.0%
TAGGCGAAATCTTGGATACT+TGG + Chr2:17900370-17900389 None:intergenic 40.0%
TATGGTACTTCGTGTCCATA+TGG + Chr2:17902397-17902416 None:intergenic 40.0%
TCCATCTTTCCATCATAGGA+AGG + Chr2:17904528-17904547 None:intergenic 40.0%
TCGCTCAATATAGCAAGGAA+AGG + Chr2:17902642-17902661 None:intergenic 40.0%
TGACTGTGGAAATGGAAGAT+GGG + Chr2:17904486-17904505 None:intergenic 40.0%
TGCTGATGACTAATCTCTCT+CGG + Chr2:17904618-17904637 None:intergenic 40.0%
TGGGATTCACCATAGAGAAT+CGG + Chr2:17903792-17903811 None:intergenic 40.0%
TGTACATATCTTCGTCACTC+GGG - Chr2:17902812-17902831 MsG0280007600.01.T01:CDS 40.0%
TTACCATCAGAATCTGTGCA+TGG - Chr2:17899664-17899683 MsG0280007600.01.T01:three_prime_UTR 40.0%
TTCCTTAACGTACCAAAGAC+TGG + Chr2:17900659-17900678 None:intergenic 40.0%
TTTCCATTGGTGAATGGTGA+AGG + Chr2:17904558-17904577 None:intergenic 40.0%
! AATTGAGCAAAATGGCTCTG+TGG - Chr2:17903507-17903526 MsG0280007600.01.T01:intron 40.0%
! AGCCATATTTTGTCCGATGT+GGG + Chr2:17901027-17901046 None:intergenic 40.0%
! ATGTTTAAAACCACGGTCGT+CGG - Chr2:17903113-17903132 MsG0280007600.01.T01:intron 40.0%
! CAAGTGTTGCACAAGAAATC+AGG - Chr2:17904430-17904449 MsG0280007600.01.T01:intron 40.0%
! CAGCTACTAAATGGACTCTT+AGG - Chr2:17899593-17899612 MsG0280007600.01.T01:three_prime_UTR 40.0%
! CATGCTTTTCCATTGGTGAA+TGG + Chr2:17904564-17904583 None:intergenic 40.0%
! CTTGCACATGTTGGAGATTT+TGG - Chr2:17901344-17901363 MsG0280007600.01.T01:intron 40.0%
! GTGGTATAGTGGTTGGATTT+TGG - Chr2:17903425-17903444 MsG0280007600.01.T01:intron 40.0%
! GTGTTCATGGCTTTGCATAT+TGG - Chr2:17901894-17901913 MsG0280007600.01.T01:CDS 40.0%
! TCCTTCCTATGATGGAAAGA+TGG - Chr2:17904524-17904543 MsG0280007600.01.T01:intron 40.0%
! TTCAAGTTCGGGAATTATCG+TGG - Chr2:17902191-17902210 MsG0280007600.01.T01:intron 40.0%
!! ACAGGAAACAATTTCTGGTC+TGG - Chr2:17903256-17903275 MsG0280007600.01.T01:intron 40.0%
!! CAGTTGGATTGGTTATATGG+TGG - Chr2:17903350-17903369 MsG0280007600.01.T01:intron 40.0%
!! CCTCACAAGTCGGTTTTATA+AGG - Chr2:17901080-17901099 MsG0280007600.01.T01:CDS 40.0%
!! CCTTATAAAACCGACTTGTG+AGG + Chr2:17901083-17901102 None:intergenic 40.0%
!! GGTTGGATTTTGGCATATGT+GGG - Chr2:17903435-17903454 MsG0280007600.01.T01:intron 40.0%
!! TACCAAAGACTGGTTTCAAG+AGG + Chr2:17900649-17900668 None:intergenic 40.0%
!! TGGTTGGATTTTGGCATATG+TGG - Chr2:17903434-17903453 MsG0280007600.01.T01:intron 40.0%
!! TGTAGCTGGTTTGTTGATGT+GGG - Chr2:17901794-17901813 MsG0280007600.01.T01:intron 40.0%
!! TTGACATGGATTTTGATGGC+AGG - Chr2:17900334-17900353 MsG0280007600.01.T01:intron 40.0%
!! TTGTAGCTGGTTTGTTGATG+TGG - Chr2:17901793-17901812 MsG0280007600.01.T01:intron 40.0%
AAATGGGGCCATGTTGATGT+TGG - Chr2:17904375-17904394 MsG0280007600.01.T01:intron 45.0%
AAGGTTCTTGGCAAATGGAC+CGG - Chr2:17902283-17902302 MsG0280007600.01.T01:CDS 45.0%
ACACTTGACTGAAGAGTTGG+AGG + Chr2:17904417-17904436 None:intergenic 45.0%
ACTTCTTTCGACCGTTGACA+TGG - Chr2:17902749-17902768 MsG0280007600.01.T01:CDS 45.0%
ATATTAGTGGCAGGCGGTAT+TGG - Chr2:17902609-17902628 MsG0280007600.01.T01:intron 45.0%
ATCTTCGGTGGTATAGTGGT+TGG - Chr2:17903418-17903437 MsG0280007600.01.T01:intron 45.0%
ATGTCAACGGTCGAAAGAAG+TGG + Chr2:17902750-17902769 None:intergenic 45.0%
CCCCAAATGGTCCATTGATA+AGG + Chr2:17900407-17900426 None:intergenic 45.0%
CGATATTCTCCATCGTGTGA+GGG - Chr2:17902659-17902678 MsG0280007600.01.T01:intron 45.0%
CGGGATTGGATTAATGTGCT+TGG - Chr2:17901380-17901399 MsG0280007600.01.T01:intron 45.0%
CTACCATACAGTATGGCTCT+AGG - Chr2:17903569-17903588 MsG0280007600.01.T01:intron 45.0%
GACTGTGGAAATGGAAGATG+GGG + Chr2:17904485-17904504 None:intergenic 45.0%
GATTCTTTCTCTTAACCCCC+CGG + Chr2:17902305-17902324 None:intergenic 45.0%
GCAACACTTGACTGAAGAGT+TGG + Chr2:17904420-17904439 None:intergenic 45.0%
GCTACTACTTGTAGTCTGCA+TGG - Chr2:17903381-17903400 MsG0280007600.01.T01:intron 45.0%
GCTGATAACTCCTGCTAGAT+TGG + Chr2:17901772-17901791 None:intergenic 45.0%
GGGATTCACCATAGAGAATC+GGG + Chr2:17903791-17903810 None:intergenic 45.0%
GGGCTAGAAGAAACACTGAA+TGG + Chr2:17902229-17902248 None:intergenic 45.0%
GTAATCCTCACCTCACAAGT+CGG - Chr2:17901070-17901089 MsG0280007600.01.T01:CDS 45.0%
GTCCCACATCGGACAAAATA+TGG - Chr2:17901022-17901041 MsG0280007600.01.T01:CDS 45.0%
GTCGTAGATGTAGGCACAAT+TGG - Chr2:17903032-17903051 MsG0280007600.01.T01:intron 45.0%
GTTGCAGAAACAACCCCAAA+TGG + Chr2:17900420-17900439 None:intergenic 45.0%
GTTTCTGCAACAGAGCTCAT+TGG - Chr2:17900429-17900448 MsG0280007600.01.T01:intron 45.0%
TACCGCCTGCCACTAATATA+AGG + Chr2:17902608-17902627 None:intergenic 45.0%
TCATACGGTGGTAACAGCTT+CGG - Chr2:17902363-17902382 MsG0280007600.01.T01:CDS 45.0%
TCTTGAGTCCCGATTCTCTA+TGG - Chr2:17903780-17903799 MsG0280007600.01.T01:CDS 45.0%
TGAGGTTCTGCCAATCAAGA+AGG - Chr2:17901976-17901995 MsG0280007600.01.T01:CDS 45.0%
TTCAGCAGTGGAACTTCCTT+TGG - Chr2:17899709-17899728 MsG0280007600.01.T01:three_prime_UTR 45.0%
! AAATGGCTCTGTGGATCACA+AGG - Chr2:17903516-17903535 MsG0280007600.01.T01:intron 45.0%
! CTCTAGCTTCCTTCCTATGA+TGG - Chr2:17904516-17904535 MsG0280007600.01.T01:intron 45.0%
! GAGCCATATTTTGTCCGATG+TGG + Chr2:17901028-17901047 None:intergenic 45.0%
!! ATTGGTGTTGCCAATCTAGC+AGG - Chr2:17901759-17901778 MsG0280007600.01.T01:intron 45.0%
!! GGAACTTCCTTTGGAATCAC+AGG - Chr2:17899718-17899737 MsG0280007600.01.T01:three_prime_UTR 45.0%
!! TAAAACCGACTTGTGAGGTG+AGG + Chr2:17901078-17901097 None:intergenic 45.0%
AAATTCCACGTTCGCACTCC+AGG + Chr2:17901831-17901850 None:intergenic 50.0%
ACATCTACGACTGCAGAGAG+TGG + Chr2:17903023-17903042 None:intergenic 50.0%
ACCATTTCCACAGTGCCACA+AGG + Chr2:17902032-17902051 None:intergenic 50.0%
AGGTTCTTGGCAAATGGACC+GGG - Chr2:17902284-17902303 MsG0280007600.01.T01:CDS 50.0%
ATCTGTTCAGCCTCATACGG+TGG - Chr2:17902351-17902370 MsG0280007600.01.T01:CDS 50.0%
ATGGCCCCATTTCTCTGACA+TGG + Chr2:17904367-17904386 None:intergenic 50.0%
ATGGCTAGGACACCTCACAA+TGG - Chr2:17901488-17901507 MsG0280007600.01.T01:CDS 50.0%
ATTCTCCATCGTGTGAGGGA+TGG - Chr2:17902663-17902682 MsG0280007600.01.T01:intron 50.0%
CATCTACGACTGCAGAGAGT+GGG + Chr2:17903022-17903041 None:intergenic 50.0%
CTCTCTGCAGTCGTAGATGT+AGG - Chr2:17903023-17903042 MsG0280007600.01.T01:intron 50.0%
CTTGTAGTCTGCATGGTTGC+AGG - Chr2:17903388-17903407 MsG0280007600.01.T01:intron 50.0%
GAAGCTGTTACCACCGTATG+AGG + Chr2:17902364-17902383 None:intergenic 50.0%
GCAGGTGTAGTTATCTTCGG+TGG - Chr2:17903406-17903425 MsG0280007600.01.T01:intron 50.0%
GCGATATTCTCCATCGTGTG+AGG - Chr2:17902658-17902677 MsG0280007600.01.T01:intron 50.0%
GGGAATTATCGTGGCTTCAG+TGG - Chr2:17902200-17902219 MsG0280007600.01.T01:intron 50.0%
GTGGTAACAGCTTCGGTTGA+GGG - Chr2:17902370-17902389 MsG0280007600.01.T01:CDS 50.0%
TCCTTGTGGCACTGTGGAAA+TGG - Chr2:17902028-17902047 MsG0280007600.01.T01:CDS 50.0%
TCGGGAATCAGATCCTCCAT+TGG - Chr2:17902830-17902849 MsG0280007600.01.T01:CDS 50.0%
TGGCCTAGAGCCATACTGTA+TGG + Chr2:17903575-17903594 None:intergenic 50.0%
TGGTAACAGCTTCGGTTGAG+GGG - Chr2:17902371-17902390 MsG0280007600.01.T01:CDS 50.0%
TTAATCCAATCCCGCCCGAA+CGG + Chr2:17901374-17901393 None:intergenic 50.0%
TTCTCCATCGTGTGAGGGAT+GGG - Chr2:17902664-17902683 MsG0280007600.01.T01:intron 50.0%
TTTCCACAGTGCCACAAGGA+AGG + Chr2:17902028-17902047 None:intergenic 50.0%
! GGAGTTATCAGCCTTGTAGC+TGG - Chr2:17901780-17901799 MsG0280007600.01.T01:intron 50.0%
!! GGCTCTAGGCCAGACTTTAA+AGG - Chr2:17903583-17903602 MsG0280007600.01.T01:intron 50.0%
!!! GAGATTTTGGGACTCCGTTC+GGG - Chr2:17901357-17901376 MsG0280007600.01.T01:intron 50.0%
!!! GGAGATTTTGGGACTCCGTT+CGG - Chr2:17901356-17901375 MsG0280007600.01.T01:intron 50.0%
AGAATAGTGACCGACGACCG+TGG + Chr2:17903126-17903145 None:intergenic 55.0%
ATGGAGAGGATTGTTGGCCG+TGG + Chr2:17900843-17900862 None:intergenic 55.0%
GGTGGTAACAGCTTCGGTTG+AGG - Chr2:17902369-17902388 MsG0280007600.01.T01:CDS 55.0%
GGTTCTTGGCAAATGGACCG+GGG - Chr2:17902285-17902304 MsG0280007600.01.T01:CDS 55.0%
GTTCTTGGCAAATGGACCGG+GGG - Chr2:17902286-17902305 MsG0280007600.01.T01:CDS 55.0%
GTTTCCCATCCCTCACACGA+TGG + Chr2:17902671-17902690 None:intergenic 55.0%
TTCTTGGCAAATGGACCGGG+GGG - Chr2:17902287-17902306 MsG0280007600.01.T01:CDS 55.0%
! TCATCGAGGTGCCTTCCTTG+TGG - Chr2:17902014-17902033 MsG0280007600.01.T01:CDS 55.0%
!!! ATTTTGGGACTCCGTTCGGG+CGG - Chr2:17901360-17901379 MsG0280007600.01.T01:intron 55.0%
ATGTGGGTGACCTCGCTTCC+TGG - Chr2:17901810-17901829 MsG0280007600.01.T01:intron 60.0%
GCTTCGGTTGAGGGGCCATA+TGG - Chr2:17902379-17902398 MsG0280007600.01.T01:CDS 60.0%
GTGCCTTCCTTGTGGCACTG+TGG - Chr2:17902022-17902041 MsG0280007600.01.T01:CDS 60.0%
!!! TTTTGGGACTCCGTTCGGGC+GGG - Chr2:17901361-17901380 MsG0280007600.01.T01:intron 60.0%
CGCTTCCTGGAGTGCGAACG+TGG - Chr2:17901823-17901842 MsG0280007600.01.T01:intron 65.0%
CGTTCGCACTCCAGGAAGCG+AGG + Chr2:17901823-17901842 None:intergenic 65.0%
GGACTCCGTTCGGGCGGGAT+TGG - Chr2:17901366-17901385 MsG0280007600.01.T01:intron 70.0%
Chromosome Type Strat End Strand Name
Chr2 gene 17899254 17905048 17899254 ID=MsG0280007600.01;Name=MsG0280007600.01
Chr2 mRNA 17899254 17905048 17899254 ID=MsG0280007600.01.T01;Parent=MsG0280007600.01;Name=MsG0280007600.01.T01;_AED=0.26;_eAED=0.26;_QI=242|1|1|1|1|1|9|527|740
Chr2 exon 17899254 17899950 17899254 ID=MsG0280007600.01.T01:exon:10839;Parent=MsG0280007600.01.T01
Chr2 exon 17900698 17901130 17900698 ID=MsG0280007600.01.T01:exon:10838;Parent=MsG0280007600.01.T01
Chr2 exon 17901451 17901706 17901451 ID=MsG0280007600.01.T01:exon:10837;Parent=MsG0280007600.01.T01
Chr2 exon 17901877 17902144 17901877 ID=MsG0280007600.01.T01:exon:10836;Parent=MsG0280007600.01.T01
Chr2 exon 17902234 17902561 17902234 ID=MsG0280007600.01.T01:exon:10835;Parent=MsG0280007600.01.T01
Chr2 exon 17902724 17902958 17902724 ID=MsG0280007600.01.T01:exon:10834;Parent=MsG0280007600.01.T01
Chr2 exon 17903752 17903946 17903752 ID=MsG0280007600.01.T01:exon:10833;Parent=MsG0280007600.01.T01
Chr2 exon 17904230 17904323 17904230 ID=MsG0280007600.01.T01:exon:10832;Parent=MsG0280007600.01.T01
Chr2 exon 17904563 17905048 17904563 ID=MsG0280007600.01.T01:exon:10831;Parent=MsG0280007600.01.T01
Chr2 five_prime_UTR 17904807 17905048 17904807 ID=MsG0280007600.01.T01:five_prime_utr;Parent=MsG0280007600.01.T01
Chr2 CDS 17904563 17904806 17904563 ID=MsG0280007600.01.T01:cds;Parent=MsG0280007600.01.T01
Chr2 CDS 17904230 17904323 17904230 ID=MsG0280007600.01.T01:cds;Parent=MsG0280007600.01.T01
Chr2 CDS 17903752 17903946 17903752 ID=MsG0280007600.01.T01:cds;Parent=MsG0280007600.01.T01
Chr2 CDS 17902724 17902958 17902724 ID=MsG0280007600.01.T01:cds;Parent=MsG0280007600.01.T01
Chr2 CDS 17902234 17902561 17902234 ID=MsG0280007600.01.T01:cds;Parent=MsG0280007600.01.T01
Chr2 CDS 17901877 17902144 17901877 ID=MsG0280007600.01.T01:cds;Parent=MsG0280007600.01.T01
Chr2 CDS 17901451 17901706 17901451 ID=MsG0280007600.01.T01:cds;Parent=MsG0280007600.01.T01
Chr2 CDS 17900698 17901130 17900698 ID=MsG0280007600.01.T01:cds;Parent=MsG0280007600.01.T01
Chr2 CDS 17899781 17899950 17899781 ID=MsG0280007600.01.T01:cds;Parent=MsG0280007600.01.T01
Chr2 three_prime_UTR 17899254 17899780 17899254 ID=MsG0280007600.01.T01:three_prime_utr;Parent=MsG0280007600.01.T01
Gene Sequence

>MsG0280007600.01.T01

ATGGAGAAAAATTCTGTTGATTATAGTCCTTTGCTTTCTAAGAAAGGTGATGAAACTGATGGTTATGTTAAAAAAAATTCACCTAATTTTGTTGTGTCAGCTACTAAATGGACTCTTAGGACTTTGATTTCCATAATCTTCATTATATGGGCTGCTTTCATTTTTCTGTTACCATCAGAATCTGTGCATGGATTGTTCACAAAATGGCTTAATTTCAGCAGTGGAACTTCCTTTGGAATCACAGGAAGCATTTTACTGATTCTCAGTGCTCCTGTTCTTGCAATTGCATTTCTTGCCATTGCATACCTAATTATTTCTGGGGAGGATCAGCTTCCTGAGAAGAAGACTTCCAAGTATCCAAGATTTCGCCTATGGACTTTTCCGATCCTTATCAATGGACCATTTGGGGTTGTTTCTGCAACAGAGCTCATTGGAATTGTCATTTTTTTGGCATATGTTATTTGGGCTTTCTATGCTTATACTATGCAGGCTCTTGCAGCTATGTCTTATCAGTTATCATTTAGAGCCAAGAGCTTGCACATGTTGGAGATTTTGGGACTCCGTTCGGGCGGGATTGGATTAATGTGCTTGGCGTTTTTATTTATACCGATTTCAAGGGGATCTGTTCTTCTCCGCTTCATAGATATCCCTTTCGAACATGCTGCAAAATATCATGTATGGCTAGGACACCTCACAATGGTGATTTTTACTCTCCATGGACTCTTCTATGTTATTGAGTGGCTAATGGAAGGTCACCTAATTCAAGAATTATTAGAATGGAAAGATATTGGTGTTGCCAATCTAGCAGGAGTTATCAGCCTTGTAGCTGGTTTGTTGATGTGGGTGACCTCGCTTCCTGGAGTGCGAACGTGGAATTTTGAGCTGTTTTTCTACACTCACCAATTATACATAATCTTTATTGTGTTCATGGCTTTGCATATTGGCGACTTTATTTTTGCTATGGCTGCTGGACCAATATTTCTTTTTATGCTTGATCGATTTCTGAGGTTCTGCCAATCAAGAAGGACAGTAAATGTAATCTCATCGAGGTGCCTTCCTTGTGGCACTGTGGAAATGGTTCTGTCAAAACCACAAAATTTGAGATACAATGCCCTAAGCTTCATTTTCCTTCAAGTTCGGGAATTATCGTGGCTTCAGTGGCATCCATTCAGTGTTTCTTCTAGCCCTTTAGATGGAAAAAATCACATTGCTGTTCTCATTAAGGTTCTTGGCAAATGGACCGGGGGGTTAAGAGAAAGAATCACTGAAGGTGATGCAACAGAAAATTTATCTGTTCAGCCTCATACGGTGGTAACAGCTTCGGTTGAGGGGCCATATGGACACGAAGTACCATATCACTTGATGTACGAAAACCTTATATTAGTGGCAGGCGGTATTGGACTTTCGCCTTTCCTTGCTATATTGAGCGATATTCTCCATCGTGTGAGGGATGGGAAACCTTGTCGACCAAGAAATATTTTAATTGTTTGGGCAGTGAAAAAGTCAAATGAGCTTCCACTTCTTTCGACCGTTGACATGGAAACAATCTGTCCACGCTTTTCTGATAAAGTAAATATCAATGTACATATCTTCGTCACTCGGGAATCAGATCCTCCATTGGAAGAGGGATACAATTACAAACCAATAAAATCACTCTGTCCCTTTCCTATGCCTAGTGATTATGGAATGTCTGGTTTGGTTGGTACAGGAAACAATTTCTGGTCTGGACTATATGTCATTTCATCTACCTTAGGCTTTGTGATCTTACTTGCTTTGTTGAATATTTACTATATAAATCCAGTTGGATTGGTTATATGGTGGTACAAAGGGCTACTACTTGTAGTCTGCATGGTTGCAGGTGTAGTTATCTTCGGTGGTATAGTGGTTGGATTTTGGCATATGTGGGAAAAGCAAAGTTCTCTAAAGGATAAGTCCAATAACATCAAGGTTGATAAAATTGAGCAAAATGGCTCTGTGGATCACAAGGATCTAAGTCAATACAATATTGCAAAGTTAACTACCATACAGTATGGCTCTAGGCCAGACTTTAAAGAGATTTTTGAATCCATGTCAGAGAAATGGGGCCATGTTGATGTTGGTATTCTAGTTTGTGGTCCTCCAACTCTTCAGTCAAGTGTTGCACAAGAAATCAGGTCACACAGTTTAACAAGAGAACCTTATCACCCCATCTTCCATTTCCACAGTCATAGCTTTGATCTCTAG

Protein sequence

>MsG0280007600.01.T01

MEKNSVDYSPLLSKKGDETDGYVKKNSPNFVVSATKWTLRTLISIIFIIWAAFIFLLPSESVHGLFTKWLNFSSGTSFGITGSILLILSAPVLAIAFLAIAYLIISGEDQLPEKKTSKYPRFRLWTFPILINGPFGVVSATELIGIVIFLAYVIWAFYAYTMQALAAMSYQLSFRAKSLHMLEILGLRSGGIGLMCLAFLFIPISRGSVLLRFIDIPFEHAAKYHVWLGHLTMVIFTLHGLFYVIEWLMEGHLIQELLEWKDIGVANLAGVISLVAGLLMWVTSLPGVRTWNFELFFYTHQLYIIFIVFMALHIGDFIFAMAAGPIFLFMLDRFLRFCQSRRTVNVISSRCLPCGTVEMVLSKPQNLRYNALSFIFLQVRELSWLQWHPFSVSSSPLDGKNHIAVLIKVLGKWTGGLRERITEGDATENLSVQPHTVVTASVEGPYGHEVPYHLMYENLILVAGGIGLSPFLAILSDILHRVRDGKPCRPRNILIVWAVKKSNELPLLSTVDMETICPRFSDKVNINVHIFVTRESDPPLEEGYNYKPIKSLCPFPMPSDYGMSGLVGTGNNFWSGLYVISSTLGFVILLALLNIYYINPVGLVIWWYKGLLLVVCMVAGVVIFGGIVVGFWHMWEKQSSLKDKSNNIKVDKIEQNGSVDHKDLSQYNIAKLTTIQYGSRPDFKEIFESMSEKWGHVDVGILVCGPPTLQSSVAQEIRSHSLTREPYHPIFHFHSHSFDL*