Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480021652.01.T01 | XP_003607427.1 | 99.24 | 263 | 2 | 0 | 1 | 263 | 1 | 263 | 0 | 548 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480021652.01.T01 | Q9M9M4 | 73.359 | 259 | 65 | 3 | 4 | 259 | 5 | 262 | 3.95E-130 | 399 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480021652.01.T01 | G7JSR7 | 99.240 | 263 | 2 | 0 | 1 | 263 | 1 | 263 | 0.0 | 548 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0180001548.01 | MsG0480021652.01 | -0.805824 | 1.107794e-49 | 5.919334e-47 |
| MsG0180005199.01 | MsG0480021652.01 | 0.832439 | 9.445736e-56 | 1.055816e-52 |
| MsG0180005636.01 | MsG0480021652.01 | 0.808389 | 3.172926e-50 | 1.811934e-47 |
| MsG0480019812.01 | MsG0480021652.01 | -0.803727 | 3.036281e-49 | 1.537183e-46 |
| MsG0480021652.01 | MsG0480021653.01 | 0.852385 | 4.778528e-61 | 9.968163e-58 |
| MsG0480021652.01 | MsG0480021859.01 | 0.864804 | 9.343803e-65 | 2.971638e-61 |
| MsG0480021652.01 | MsG0580024080.01 | 0.805580 | 1.246315e-49 | 6.617751e-47 |
| MsG0480021652.01 | MsG0780039440.01 | 0.890602 | 8.491262e-74 | 7.189769e-70 |
| MsG0480021652.01 | MsG0780041213.01 | 0.858447 | 8.186712e-63 | 2.090050e-59 |
| MsG0480021652.01 | MsG0780041422.01 | 0.839407 | 1.614527e-57 | 2.227616e-54 |
| MsG0480021652.01 | MsG0880042849.01 | 0.817483 | 3.221049e-52 | 2.348722e-49 |
| MsG0480021652.01 | MsG0880046179.01 | 0.819632 | 1.048915e-52 | 8.115178e-50 |
| MsG0480021652.01 | MsG0880047123.01 | 0.890776 | 7.253951e-74 | 6.187770e-70 |
| MsG0380016323.01 | MsG0480021652.01 | 0.819576 | 1.079913e-52 | 8.342704e-50 |
| MsG0380016340.01 | MsG0480021652.01 | 0.801837 | 7.457361e-49 | 3.597571e-46 |
| MsG0380016832.01 | MsG0480021652.01 | 0.815073 | 1.114484e-51 | 7.606996e-49 |
| MsG0380017362.01 | MsG0480021652.01 | 0.837271 | 5.737033e-57 | 7.413208e-54 |
| MsG0280007598.01 | MsG0480021652.01 | 0.880177 | 6.806221e-70 | 3.796777e-66 |
| MsG0280009139.01 | MsG0480021652.01 | 0.821401 | 4.116753e-53 | 3.345765e-50 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480021652.01.T01 | MTR_4g077910 | 99.240 | 263 | 2 | 0 | 1 | 263 | 1 | 263 | 0.0 | 548 |
| MsG0480021652.01.T01 | MTR_1g039480 | 58.798 | 233 | 78 | 7 | 29 | 258 | 27 | 244 | 2.88e-83 | 270 |
| MsG0480021652.01.T01 | MTR_1g039445 | 61.712 | 222 | 62 | 6 | 29 | 247 | 20 | 221 | 3.32e-83 | 270 |
| MsG0480021652.01.T01 | MTR_5g029190 | 59.535 | 215 | 73 | 5 | 43 | 249 | 16 | 224 | 1.83e-75 | 249 |
| MsG0480021652.01.T01 | MTR_7g116230 | 56.962 | 158 | 29 | 4 | 106 | 263 | 1 | 119 | 4.83e-44 | 159 |
| MsG0480021652.01.T01 | MTR_7g109200 | 39.749 | 239 | 114 | 8 | 35 | 257 | 61 | 285 | 2.46e-37 | 140 |
| MsG0480021652.01.T01 | MTR_4g131780 | 46.988 | 166 | 56 | 5 | 16 | 180 | 11 | 145 | 2.53e-37 | 129 |
| MsG0480021652.01.T01 | MTR_2g438220 | 72.340 | 47 | 11 | 1 | 202 | 246 | 88 | 134 | 1.03e-14 | 74.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480021652.01.T01 | AT3G03050 | 73.359 | 259 | 65 | 3 | 4 | 259 | 5 | 262 | 4.02e-131 | 399 |
| MsG0480021652.01.T01 | AT5G16910 | 75.104 | 241 | 59 | 1 | 9 | 248 | 10 | 250 | 7.69e-125 | 382 |
| MsG0480021652.01.T01 | AT4G38190 | 61.207 | 232 | 73 | 7 | 30 | 257 | 21 | 239 | 1.04e-86 | 280 |
| MsG0480021652.01.T01 | AT1G02730 | 39.147 | 258 | 122 | 8 | 10 | 249 | 36 | 276 | 1.38e-50 | 178 |
| MsG0480021652.01.T01 | AT2G33100 | 61.644 | 73 | 23 | 3 | 198 | 268 | 95 | 164 | 1.32e-18 | 85.9 |
| MsG0480021652.01.T01 | AT2G33100 | 51.429 | 70 | 26 | 3 | 14 | 78 | 9 | 75 | 3.41e-11 | 63.9 |
| MsG0480021652.01.T01 | AT2G33100 | 61.644 | 73 | 23 | 3 | 198 | 268 | 95 | 164 | 1.32e-18 | 85.9 |
| MsG0480021652.01.T01 | AT2G33100 | 51.429 | 70 | 26 | 3 | 14 | 78 | 9 | 75 | 3.41e-11 | 63.9 |
Find 75 sgRNAs with CRISPR-Local
Find 80 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAAGTTCTGTGTTCTTATA+TGG | 0.231354 | 4:-61288070 | None:intergenic |
| TATATAGATGCAGTGAAAAT+AGG | 0.334238 | 4:+61288019 | MsG0480021652.01.T01:CDS |
| CCACAGATGGCTGGTGCAAA+AGG | 0.351106 | 4:+61287893 | MsG0480021652.01.T01:CDS |
| TGGCCAAAGGAAGGGGATTT+CGG | 0.355911 | 4:+61288280 | MsG0480021652.01.T01:CDS |
| TATTCCTGGCTGTGATTCTA+AGG | 0.372247 | 4:+61287928 | MsG0480021652.01.T01:CDS |
| TTCCACTTCCTCCACCAAAC+GGG | 0.373965 | 4:+61288122 | MsG0480021652.01.T01:CDS |
| CTGCTCATTTGTAATGAGTT+CGG | 0.379209 | 4:-61287551 | None:intergenic |
| TTATATGGCTCTTTGCATCC+TGG | 0.379237 | 4:-61288055 | None:intergenic |
| TATTACCCGTGCACATCTAA+TGG | 0.387787 | 4:+61287841 | MsG0480021652.01.T01:CDS |
| TTTGAAACAAAGGGGACATA+TGG | 0.392709 | 4:+61288241 | MsG0480021652.01.T01:CDS |
| GGGTCGAAATGTGCTATTCC+TGG | 0.393677 | 4:+61287914 | MsG0480021652.01.T01:CDS |
| TATATGGCTCTTTGCATCCT+GGG | 0.396880 | 4:-61288054 | None:intergenic |
| TTTCCGAAATCCCCTTCCTT+TGG | 0.396984 | 4:-61288283 | None:intergenic |
| AAATGTTACGGTTGGATGTA+AGG | 0.415264 | 4:-61287621 | None:intergenic |
| AAGGAAGGGGATTTCGGAAA+TGG | 0.422255 | 4:+61288286 | MsG0480021652.01.T01:CDS |
| CGATGGTTGTTTGAAACAAA+GGG | 0.424075 | 4:+61288232 | MsG0480021652.01.T01:CDS |
| CTCGCTATCAAGATCATCTC+TGG | 0.432065 | 4:-61287681 | None:intergenic |
| TTACATCCAACCGTAACATT+TGG | 0.435589 | 4:+61287623 | MsG0480021652.01.T01:CDS |
| GTTTCAAGTTCTCTATTCAC+TGG | 0.442653 | 4:+61287806 | MsG0480021652.01.T01:CDS |
| GATGAAGTGGCTGTGAATAA+TGG | 0.446503 | 4:+61288091 | MsG0480021652.01.T01:CDS |
| GTATCCATAGGTTGGTTATC+CGG | 0.451756 | 4:-61287752 | None:intergenic |
| ATGGTTATGGCAATGCAATA+TGG | 0.453385 | 4:+61288260 | MsG0480021652.01.T01:CDS |
| CTCAACTTTCTGCGAGATTG+AGG | 0.454526 | 4:-61287774 | None:intergenic |
| CTTCCACTTCCTCCACCAAA+CGG | 0.457767 | 4:+61288121 | MsG0480021652.01.T01:CDS |
| TGCAATATGGCCAAAGGAAG+GGG | 0.469151 | 4:+61288273 | MsG0480021652.01.T01:CDS |
| GCGCTGATGAGAAGTCAAAC+TGG | 0.475372 | 4:+61288193 | MsG0480021652.01.T01:CDS |
| AGTTCTTCGGCCAAATGTTA+CGG | 0.477640 | 4:-61287633 | None:intergenic |
| ACAAAGGGGACATATGGTTA+TGG | 0.484592 | 4:+61288247 | MsG0480021652.01.T01:CDS |
| GATGATCTTGATAGCGAGCT+AGG | 0.485096 | 4:+61287686 | MsG0480021652.01.T01:CDS |
| TATCTTATAATCACACTCAC+AGG | 0.494707 | 4:-61287984 | None:intergenic |
| TTTGGTGGAGGAAGTGGAAG+TGG | 0.501359 | 4:-61288118 | None:intergenic |
| TCGATGGTTGTTTGAAACAA+AGG | 0.518208 | 4:+61288231 | MsG0480021652.01.T01:CDS |
| CTTCGGCCAAATGTTACGGT+TGG | 0.525516 | 4:-61287629 | None:intergenic |
| GAACACAGAACTTGATGAAG+TGG | 0.527152 | 4:+61288078 | MsG0480021652.01.T01:CDS |
| ATCGACCGGATGAAGTTCTT+CGG | 0.533914 | 4:-61287646 | None:intergenic |
| CCACTGATTGATGAGCCGCC+AGG | 0.539087 | 4:+61288331 | MsG0480021652.01.T01:CDS |
| CACAGATGGCTGGTGCAAAA+GGG | 0.540028 | 4:+61287894 | MsG0480021652.01.T01:CDS |
| AGACTTTGTCGATTTCATCA+AGG | 0.542739 | 4:-61288170 | None:intergenic |
| ATAGGAGATGGGATGTGCCC+AGG | 0.542804 | 4:+61288037 | MsG0480021652.01.T01:CDS |
| ATGCAGTGAAAATAGGAGAT+GGG | 0.544148 | 4:+61288026 | MsG0480021652.01.T01:CDS |
| GATGCAGTGAAAATAGGAGA+TGG | 0.544653 | 4:+61288025 | MsG0480021652.01.T01:CDS |
| CTTTATCCATTAGATGTGCA+CGG | 0.545565 | 4:-61287847 | None:intergenic |
| TTTGGCCGAAGAACTTCATC+CGG | 0.545571 | 4:+61287641 | MsG0480021652.01.T01:CDS |
| GTAAATCATCCACAGATGGC+TGG | 0.551375 | 4:+61287884 | MsG0480021652.01.T01:CDS |
| GATTTCGGAAATGGAAAAGA+TGG | 0.553684 | 4:+61288295 | MsG0480021652.01.T01:CDS |
| TTTATCCATTAGATGTGCAC+GGG | 0.557966 | 4:-61287846 | None:intergenic |
| CACTCCGGATAACCAACCTA+TGG | 0.561400 | 4:+61287748 | MsG0480021652.01.T01:CDS |
| TCCACTTCCTCCACCAAACG+GGG | 0.562983 | 4:+61288123 | MsG0480021652.01.T01:CDS |
| TCAAGTTCTCTATTCACTGG+AGG | 0.565971 | 4:+61287809 | MsG0480021652.01.T01:CDS |
| TGCGAGATTGAGGTATCCAT+AGG | 0.569033 | 4:-61287764 | None:intergenic |
| AGATTGAGGTATCCATAGGT+TGG | 0.571127 | 4:-61287760 | None:intergenic |
| TCGGCTCATCAATTCAGTCC+TGG | 0.574846 | 4:-61288349 | None:intergenic |
| AATGTTACGGTTGGATGTAA+GGG | 0.578477 | 4:-61287620 | None:intergenic |
| ATCACCTTAGAATCACAGCC+AGG | 0.581701 | 4:-61287932 | None:intergenic |
| CATAGGTTGGTTATCCGGAG+TGG | 0.589102 | 4:-61287747 | None:intergenic |
| ATAGGTTGGTTATCCGGAGT+GGG | 0.590129 | 4:-61287746 | None:intergenic |
| GGAGTAACTGATGTATCGAC+CGG | 0.593019 | 4:-61287660 | None:intergenic |
| AATGCAATATGGCCAAAGGA+AGG | 0.593345 | 4:+61288271 | MsG0480021652.01.T01:CDS |
| ATGCAATATGGCCAAAGGAA+GGG | 0.595431 | 4:+61288272 | MsG0480021652.01.T01:CDS |
| CTCAATCTCGCAGAAAGTTG+AGG | 0.597849 | 4:+61287775 | MsG0480021652.01.T01:CDS |
| TGAAGTAAATCATCCACAGA+TGG | 0.601911 | 4:+61287880 | MsG0480021652.01.T01:CDS |
| CACTTCCTCCACCAAACGGG+GGG | 0.610575 | 4:+61288125 | MsG0480021652.01.T01:CDS |
| TGGCAATGCAATATGGCCAA+AGG | 0.629077 | 4:+61288267 | MsG0480021652.01.T01:CDS |
| GTTACGGTTGGATGTAAGGG+AGG | 0.629747 | 4:-61287617 | None:intergenic |
| CCACTTCCTCCACCAAACGG+GGG | 0.633334 | 4:+61288124 | MsG0480021652.01.T01:CDS |
| AGTGCACTTACCACCCACTC+CGG | 0.636922 | 4:+61287733 | MsG0480021652.01.T01:CDS |
| GAGACTTTGATCACAATCGA+TGG | 0.649293 | 4:+61288215 | MsG0480021652.01.T01:CDS |
| CCTGGCGGCTCATCAATCAG+TGG | 0.652858 | 4:-61288331 | None:intergenic |
| GGTTGGTTATCCGGAGTGGG+TGG | 0.659629 | 4:-61287743 | None:intergenic |
| GAAGTGGCTGTGAATAATGG+AGG | 0.663961 | 4:+61288094 | MsG0480021652.01.T01:CDS |
| ATCTTATAATCACACTCACA+GGG | 0.682477 | 4:-61287983 | None:intergenic |
| GATGGTTGTTTGAAACAAAG+GGG | 0.686620 | 4:+61288233 | MsG0480021652.01.T01:CDS |
| AAGTGGCTGTGAATAATGGA+GGG | 0.736494 | 4:+61288095 | MsG0480021652.01.T01:CDS |
| GCTCATCAATTCAGTCCTGG+CGG | 0.742065 | 4:-61288346 | None:intergenic |
| AAGGTGATGAGTGATGAACG+TGG | 0.906383 | 4:+61287947 | MsG0480021652.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | TATATAGATGCAGTGAAAAT+AGG | + | Chr4:61288019-61288038 | MsG0480021652.01.T01:CDS | 25.0% |
| ATCTTATAATCACACTCACA+GGG | - | Chr4:61287986-61288005 | None:intergenic | 30.0% | |
| TATCTTATAATCACACTCAC+AGG | - | Chr4:61287987-61288006 | None:intergenic | 30.0% | |
| TCAAGTTCTGTGTTCTTATA+TGG | - | Chr4:61288073-61288092 | None:intergenic | 30.0% | |
| AAATGTTACGGTTGGATGTA+AGG | - | Chr4:61287624-61287643 | None:intergenic | 35.0% | |
| AATGTTACGGTTGGATGTAA+GGG | - | Chr4:61287623-61287642 | None:intergenic | 35.0% | |
| ATGCAGTGAAAATAGGAGAT+GGG | + | Chr4:61288026-61288045 | MsG0480021652.01.T01:CDS | 35.0% | |
| ATGGTTATGGCAATGCAATA+TGG | + | Chr4:61288260-61288279 | MsG0480021652.01.T01:CDS | 35.0% | |
| CTGCTCATTTGTAATGAGTT+CGG | - | Chr4:61287554-61287573 | None:intergenic | 35.0% | |
| CTTTATCCATTAGATGTGCA+CGG | - | Chr4:61287850-61287869 | None:intergenic | 35.0% | |
| GATTTCGGAAATGGAAAAGA+TGG | + | Chr4:61288295-61288314 | MsG0480021652.01.T01:CDS | 35.0% | |
| TGAAGTAAATCATCCACAGA+TGG | + | Chr4:61287880-61287899 | MsG0480021652.01.T01:CDS | 35.0% | |
| TTACATCCAACCGTAACATT+TGG | + | Chr4:61287623-61287642 | MsG0480021652.01.T01:CDS | 35.0% | |
| TTTATCCATTAGATGTGCAC+GGG | - | Chr4:61287849-61287868 | None:intergenic | 35.0% | |
| ! | CGATGGTTGTTTGAAACAAA+GGG | + | Chr4:61288232-61288251 | MsG0480021652.01.T01:CDS | 35.0% |
| ! | GATGGTTGTTTGAAACAAAG+GGG | + | Chr4:61288233-61288252 | MsG0480021652.01.T01:CDS | 35.0% |
| ! | TCGATGGTTGTTTGAAACAA+AGG | + | Chr4:61288231-61288250 | MsG0480021652.01.T01:CDS | 35.0% |
| ! | TTTGAAACAAAGGGGACATA+TGG | + | Chr4:61288241-61288260 | MsG0480021652.01.T01:CDS | 35.0% |
| !! | AGACTTTGTCGATTTCATCA+AGG | - | Chr4:61288173-61288192 | None:intergenic | 35.0% |
| !! | GTTTCAAGTTCTCTATTCAC+TGG | + | Chr4:61287806-61287825 | MsG0480021652.01.T01:CDS | 35.0% |
| AATGCAATATGGCCAAAGGA+AGG | + | Chr4:61288271-61288290 | MsG0480021652.01.T01:CDS | 40.0% | |
| ACAAAGGGGACATATGGTTA+TGG | + | Chr4:61288247-61288266 | MsG0480021652.01.T01:CDS | 40.0% | |
| AGTTCTTCGGCCAAATGTTA+CGG | - | Chr4:61287636-61287655 | None:intergenic | 40.0% | |
| ATGCAATATGGCCAAAGGAA+GGG | + | Chr4:61288272-61288291 | MsG0480021652.01.T01:CDS | 40.0% | |
| GAACACAGAACTTGATGAAG+TGG | + | Chr4:61288078-61288097 | MsG0480021652.01.T01:CDS | 40.0% | |
| GAGACTTTGATCACAATCGA+TGG | + | Chr4:61288215-61288234 | MsG0480021652.01.T01:CDS | 40.0% | |
| GATGAAGTGGCTGTGAATAA+TGG | + | Chr4:61288091-61288110 | MsG0480021652.01.T01:CDS | 40.0% | |
| GATGCAGTGAAAATAGGAGA+TGG | + | Chr4:61288025-61288044 | MsG0480021652.01.T01:CDS | 40.0% | |
| TATATGGCTCTTTGCATCCT+GGG | - | Chr4:61288057-61288076 | None:intergenic | 40.0% | |
| TATTACCCGTGCACATCTAA+TGG | + | Chr4:61287841-61287860 | MsG0480021652.01.T01:CDS | 40.0% | |
| TATTCCTGGCTGTGATTCTA+AGG | + | Chr4:61287928-61287947 | MsG0480021652.01.T01:CDS | 40.0% | |
| TCAAGTTCTCTATTCACTGG+AGG | + | Chr4:61287809-61287828 | MsG0480021652.01.T01:CDS | 40.0% | |
| TTATATGGCTCTTTGCATCC+TGG | - | Chr4:61288058-61288077 | None:intergenic | 40.0% | |
| ! | AAGTGGCTGTGAATAATGGA+GGG | + | Chr4:61288095-61288114 | MsG0480021652.01.T01:CDS | 40.0% |
| ! | AGATTGAGGTATCCATAGGT+TGG | - | Chr4:61287763-61287782 | None:intergenic | 40.0% |
| !! | GTATCCATAGGTTGGTTATC+CGG | - | Chr4:61287755-61287774 | None:intergenic | 40.0% |
| AAGGAAGGGGATTTCGGAAA+TGG | + | Chr4:61288286-61288305 | MsG0480021652.01.T01:CDS | 45.0% | |
| AAGGTGATGAGTGATGAACG+TGG | + | Chr4:61287947-61287966 | MsG0480021652.01.T01:CDS | 45.0% | |
| ATCACCTTAGAATCACAGCC+AGG | - | Chr4:61287935-61287954 | None:intergenic | 45.0% | |
| ATCGACCGGATGAAGTTCTT+CGG | - | Chr4:61287649-61287668 | None:intergenic | 45.0% | |
| CTCAACTTTCTGCGAGATTG+AGG | - | Chr4:61287777-61287796 | None:intergenic | 45.0% | |
| CTCAATCTCGCAGAAAGTTG+AGG | + | Chr4:61287775-61287794 | MsG0480021652.01.T01:CDS | 45.0% | |
| CTCGCTATCAAGATCATCTC+TGG | - | Chr4:61287684-61287703 | None:intergenic | 45.0% | |
| GAAGTGGCTGTGAATAATGG+AGG | + | Chr4:61288094-61288113 | MsG0480021652.01.T01:CDS | 45.0% | |
| GTAAATCATCCACAGATGGC+TGG | + | Chr4:61287884-61287903 | MsG0480021652.01.T01:CDS | 45.0% | |
| TGCAATATGGCCAAAGGAAG+GGG | + | Chr4:61288273-61288292 | MsG0480021652.01.T01:CDS | 45.0% | |
| TGGCAATGCAATATGGCCAA+AGG | + | Chr4:61288267-61288286 | MsG0480021652.01.T01:CDS | 45.0% | |
| TTTCCGAAATCCCCTTCCTT+TGG | - | Chr4:61288286-61288305 | None:intergenic | 45.0% | |
| TTTGGCCGAAGAACTTCATC+CGG | + | Chr4:61287641-61287660 | MsG0480021652.01.T01:CDS | 45.0% | |
| ! | GGAGTAACTGATGTATCGAC+CGG | - | Chr4:61287663-61287682 | None:intergenic | 45.0% |
| ! | TGCGAGATTGAGGTATCCAT+AGG | - | Chr4:61287767-61287786 | None:intergenic | 45.0% |
| !! | ATAGGTTGGTTATCCGGAGT+GGG | - | Chr4:61287749-61287768 | None:intergenic | 45.0% |
| !! | GATGATCTTGATAGCGAGCT+AGG | + | Chr4:61287686-61287705 | MsG0480021652.01.T01:CDS | 45.0% |
| ACCAAACGGGGGGTCTAAAA+TGG | + | Chr4:61288135-61288154 | MsG0480021652.01.T01:CDS | 50.0% | |
| CACAGATGGCTGGTGCAAAA+GGG | + | Chr4:61287894-61287913 | MsG0480021652.01.T01:CDS | 50.0% | |
| CACTCCGGATAACCAACCTA+TGG | + | Chr4:61287748-61287767 | MsG0480021652.01.T01:CDS | 50.0% | |
| CTTCCACTTCCTCCACCAAA+CGG | + | Chr4:61288121-61288140 | MsG0480021652.01.T01:CDS | 50.0% | |
| CTTCGGCCAAATGTTACGGT+TGG | - | Chr4:61287632-61287651 | None:intergenic | 50.0% | |
| GTTACGGTTGGATGTAAGGG+AGG | - | Chr4:61287620-61287639 | None:intergenic | 50.0% | |
| TGGCCAAAGGAAGGGGATTT+CGG | + | Chr4:61288280-61288299 | MsG0480021652.01.T01:CDS | 50.0% | |
| TTCCACTTCCTCCACCAAAC+GGG | + | Chr4:61288122-61288141 | MsG0480021652.01.T01:CDS | 50.0% | |
| TTTGGTGGAGGAAGTGGAAG+TGG | - | Chr4:61288121-61288140 | None:intergenic | 50.0% | |
| ! | ATTTTAGACCCCCCGTTTGG+TGG | - | Chr4:61288136-61288155 | None:intergenic | 50.0% |
| ! | GCGCTGATGAGAAGTCAAAC+TGG | + | Chr4:61288193-61288212 | MsG0480021652.01.T01:CDS | 50.0% |
| ! | GGGTCGAAATGTGCTATTCC+TGG | + | Chr4:61287914-61287933 | MsG0480021652.01.T01:CDS | 50.0% |
| ! | TCCATTTTAGACCCCCCGTT+TGG | - | Chr4:61288139-61288158 | None:intergenic | 50.0% |
| !! | CATAGGTTGGTTATCCGGAG+TGG | - | Chr4:61287750-61287769 | None:intergenic | 50.0% |
| AGTGCACTTACCACCCACTC+CGG | + | Chr4:61287733-61287752 | MsG0480021652.01.T01:CDS | 55.0% | |
| ATAGGAGATGGGATGTGCCC+AGG | + | Chr4:61288037-61288056 | MsG0480021652.01.T01:CDS | 55.0% | |
| CCACAGATGGCTGGTGCAAA+AGG | + | Chr4:61287893-61287912 | MsG0480021652.01.T01:CDS | 55.0% | |
| TCCACTTCCTCCACCAAACG+GGG | + | Chr4:61288123-61288142 | MsG0480021652.01.T01:CDS | 55.0% | |
| ! | ACGGGGGGTCTAAAATGGAG+AGG | + | Chr4:61288140-61288159 | MsG0480021652.01.T01:CDS | 55.0% |
| ! | CCTTTTGCACCAGCCATCTG+TGG | - | Chr4:61287896-61287915 | None:intergenic | 55.0% |
| CACTTCCTCCACCAAACGGG+GGG | + | Chr4:61288125-61288144 | MsG0480021652.01.T01:CDS | 60.0% | |
| CCACTTCCTCCACCAAACGG+GGG | + | Chr4:61288124-61288143 | MsG0480021652.01.T01:CDS | 60.0% | |
| CCTGGCGGCTCATCAATCAG+TGG | - | Chr4:61288334-61288353 | None:intergenic | 60.0% | |
| ! | CCACTGATTGATGAGCCGCC+AGG | + | Chr4:61288331-61288350 | MsG0480021652.01.T01:CDS | 60.0% |
| ! | GGTTGGTTATCCGGAGTGGG+TGG | - | Chr4:61287746-61287765 | None:intergenic | 60.0% |
| ! | TTAGACCCCCCGTTTGGTGG+AGG | - | Chr4:61288133-61288152 | None:intergenic | 60.0% |
| ! | CCCCCGTTTGGTGGAGGAAG+TGG | - | Chr4:61288127-61288146 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr4 | gene | 61287545 | 61288363 | 61287545 | ID=MsG0480021652.01;Name=MsG0480021652.01 |
| Chr4 | mRNA | 61287545 | 61288363 | 61287545 | ID=MsG0480021652.01.T01;Parent=MsG0480021652.01;Name=MsG0480021652.01.T01;_AED=0.48;_eAED=0.48;_QI=0|-1|0|1|-1|1|1|0|272 |
| Chr4 | exon | 61287545 | 61288363 | 61287545 | ID=MsG0480021652.01.T01:exon:9553;Parent=MsG0480021652.01.T01 |
| Chr4 | CDS | 61287545 | 61288363 | 61287545 | ID=MsG0480021652.01.T01:cds;Parent=MsG0480021652.01.T01 |
| Gene Sequence |
| Protein sequence |
