Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180001548.01.T01 | XP_003589717.2 | 90.795 | 478 | 18 | 2 | 1 | 453 | 1 | 477 | 0 | 894 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180001548.01.T01 | Q9FMX6 | 51.382 | 434 | 165 | 7 | 53 | 451 | 37 | 459 | 2.67E-147 | 431 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180001548.01.T01 | A0A396JQ54 | 90.795 | 478 | 18 | 2 | 1 | 453 | 1 | 477 | 0.0 | 894 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048253.01 | MsG0180001548.01 | -0.805786 | 1.128293e-49 | 6.023043e-47 |
| MsG0080048748.01 | MsG0180001548.01 | 0.862294 | 5.612448e-64 | 1.635299e-60 |
| MsG0080048849.01 | MsG0180001548.01 | 0.825848 | 3.748240e-54 | 3.456909e-51 |
| MsG0080048938.01 | MsG0180001548.01 | 0.814024 | 1.901633e-51 | 1.261735e-48 |
| MsG0080048993.01 | MsG0180001548.01 | 0.816731 | 4.754286e-52 | 3.395853e-49 |
| MsG0080049069.01 | MsG0180001548.01 | 0.867688 | 1.137675e-65 | 4.007164e-62 |
| MsG0080049070.01 | MsG0180001548.01 | 0.922410 | 1.019981e-88 | 3.852283e-84 |
| MsG0180000040.01 | MsG0180001548.01 | 0.839833 | 1.250683e-57 | 1.748293e-54 |
| MsG0180000113.01 | MsG0180001548.01 | 0.817717 | 2.852400e-52 | 2.093249e-49 |
| MsG0180000246.01 | MsG0180001548.01 | 0.809053 | 2.287787e-50 | 1.329482e-47 |
| MsG0180000489.01 | MsG0180001548.01 | 0.847606 | 1.039811e-59 | 1.858121e-56 |
| MsG0180000491.01 | MsG0180001548.01 | 0.830892 | 2.273058e-55 | 2.427186e-52 |
| MsG0180000549.01 | MsG0180001548.01 | 0.843067 | 1.759253e-58 | 2.720276e-55 |
| MsG0180000833.01 | MsG0180001548.01 | 0.841915 | 3.556157e-58 | 5.303603e-55 |
| MsG0180000834.01 | MsG0180001548.01 | 0.841391 | 4.889411e-58 | 7.174041e-55 |
| MsG0180000843.01 | MsG0180001548.01 | 0.805905 | 1.065283e-49 | 5.703953e-47 |
| MsG0180000942.01 | MsG0180001548.01 | 0.878158 | 3.520436e-69 | 1.818775e-65 |
| MsG0180000976.01 | MsG0180001548.01 | 0.842511 | 2.473530e-58 | 3.759034e-55 |
| MsG0180001548.01 | MsG0180001704.01 | 0.852069 | 5.878414e-61 | 1.213989e-57 |
| MsG0180001548.01 | MsG0180002184.01 | 0.805873 | 1.081561e-49 | 5.786552e-47 |
| MsG0180001548.01 | MsG0180002449.01 | 0.814339 | 1.620154e-51 | 1.084219e-48 |
| MsG0180001548.01 | MsG0180002523.01 | 0.806905 | 6.554714e-50 | 3.600607e-47 |
| MsG0180001548.01 | MsG0180002700.01 | 0.880514 | 5.156556e-70 | 2.915258e-66 |
| MsG0180001548.01 | MsG0180003196.01 | 0.894875 | 1.633559e-75 | 1.654310e-71 |
| MsG0180001548.01 | MsG0180003404.01 | -0.817203 | 3.724199e-52 | 2.694748e-49 |
| MsG0180001548.01 | MsG0180003547.01 | 0.831672 | 1.462100e-55 | 1.597737e-52 |
| MsG0180001548.01 | MsG0180003637.01 | -0.802560 | 5.293221e-49 | 2.600909e-46 |
| MsG0180001548.01 | MsG0180003748.01 | 0.801387 | 9.221926e-49 | 4.398405e-46 |
| MsG0180001548.01 | MsG0180004025.01 | 0.820864 | 5.475577e-53 | 4.384354e-50 |
| MsG0180001548.01 | MsG0180004714.01 | 0.817690 | 2.893880e-52 | 2.122044e-49 |
| MsG0180001548.01 | MsG0180004736.01 | 0.801411 | 9.121386e-49 | 4.352993e-46 |
| MsG0180001548.01 | MsG0180004792.01 | 0.891083 | 5.490985e-74 | 4.744859e-70 |
| MsG0180001548.01 | MsG0180005005.01 | 0.814033 | 1.892625e-51 | 1.256079e-48 |
| MsG0180001548.01 | MsG0180005184.01 | 0.838949 | 2.122075e-57 | 2.886786e-54 |
| MsG0180001548.01 | MsG0180005339.01 | 0.881616 | 2.070137e-70 | 1.221275e-66 |
| MsG0180001548.01 | MsG0180005391.01 | 0.806626 | 7.507456e-50 | 4.094248e-47 |
| MsG0180001548.01 | MsG0180005636.01 | -0.810699 | 1.012149e-50 | 6.143963e-48 |
| MsG0180001548.01 | MsG0180005666.01 | 0.839736 | 1.325758e-57 | 1.847572e-54 |
| MsG0180001548.01 | MsG0180005741.01 | -0.803387 | 3.572259e-49 | 1.792741e-46 |
| MsG0180001548.01 | MsG0180005898.01 | 0.839228 | 1.796452e-57 | 2.464952e-54 |
| MsG0180001548.01 | MsG0180005964.01 | 0.838678 | 2.492969e-57 | 3.363705e-54 |
| MsG0180001548.01 | MsG0180006027.01 | -0.805364 | 1.383438e-49 | 7.305274e-47 |
| MsG0180001548.01 | MsG0180006028.01 | 0.885247 | 9.583234e-72 | 6.529376e-68 |
| MsG0180001548.01 | MsG0180006136.01 | 0.801493 | 8.773590e-49 | 4.195806e-46 |
| MsG0180001548.01 | MsG0180006217.01 | 0.852903 | 3.401384e-61 | 7.217065e-58 |
| MsG0180001548.01 | MsG0180006253.01 | -0.801694 | 7.979677e-49 | 3.835359e-46 |
| MsG0180001548.01 | MsG0280006571.01 | 0.825509 | 4.510023e-54 | 4.118998e-51 |
| MsG0180001548.01 | MsG0280006914.01 | 0.815039 | 1.134101e-51 | 7.734076e-49 |
| MsG0180001548.01 | MsG0280007406.01 | 0.888937 | 3.789200e-73 | 2.995560e-69 |
| MsG0180001548.01 | MsG0280007561.01 | 0.814241 | 1.703448e-51 | 1.136912e-48 |
| MsG0180001548.01 | MsG0280007598.01 | -0.825588 | 4.318373e-54 | 3.953008e-51 |
| MsG0180001548.01 | MsG0280007647.01 | 0.824844 | 6.475308e-54 | 5.803367e-51 |
| MsG0180001548.01 | MsG0280007851.01 | -0.806471 | 8.096241e-50 | 4.398168e-47 |
| MsG0180001548.01 | MsG0280007852.01 | 0.843584 | 1.280441e-58 | 2.012804e-55 |
| MsG0180001548.01 | MsG0280007853.01 | 0.866797 | 2.192955e-65 | 7.486008e-62 |
| MsG0180001548.01 | MsG0280007867.01 | 0.811222 | 7.797612e-51 | 4.799363e-48 |
| MsG0180001548.01 | MsG0280008072.01 | 0.843502 | 1.347241e-58 | 2.112135e-55 |
| MsG0180001548.01 | MsG0280008098.01 | 0.824491 | 7.841731e-54 | 6.956474e-51 |
| MsG0180001548.01 | MsG0280008223.01 | 0.837428 | 5.229757e-57 | 6.791077e-54 |
| MsG0180001548.01 | MsG0280008343.01 | 0.890508 | 9.248793e-74 | 7.797490e-70 |
| MsG0180001548.01 | MsG0280008928.01 | 0.808966 | 2.388590e-50 | 1.384803e-47 |
| MsG0180001548.01 | MsG0280009435.01 | 0.822686 | 2.073755e-53 | 1.748094e-50 |
| MsG0180001548.01 | MsG0280009436.01 | 0.821211 | 4.555181e-53 | 3.682765e-50 |
| MsG0180001548.01 | MsG0280009445.01 | 0.828621 | 8.122367e-55 | 8.116320e-52 |
| MsG0180001548.01 | MsG0280009675.01 | 0.842672 | 2.241331e-58 | 3.423001e-55 |
| MsG0180001548.01 | MsG0280009699.01 | 0.850708 | 1.425941e-60 | 2.817892e-57 |
| MsG0180001548.01 | MsG0280010468.01 | -0.812700 | 3.714653e-51 | 2.378255e-48 |
| MsG0180001548.01 | MsG0280010728.01 | 0.833844 | 4.223689e-56 | 4.924184e-53 |
| MsG0180001548.01 | MsG0280011110.01 | -0.840606 | 7.856585e-58 | 1.124906e-54 |
| MsG0180001548.01 | MsG0280011180.01 | 0.872682 | 2.637024e-67 | 1.113561e-63 |
| MsG0180001548.01 | MsG0280011218.01 | 0.895223 | 1.175467e-75 | 1.208473e-71 |
| MsG0180001548.01 | MsG0280011271.01 | -0.809216 | 2.111098e-50 | 1.232229e-47 |
| MsG0180001548.01 | MsG0280011362.01 | 0.881950 | 1.567495e-70 | 9.367650e-67 |
| MsG0180001548.01 | MsG0380012222.01 | -0.807299 | 5.410434e-50 | 3.002689e-47 |
| MsG0180001548.01 | MsG0380012567.01 | 0.802663 | 5.042115e-49 | 2.483991e-46 |
| MsG0180001548.01 | MsG0380012868.01 | 0.904414 | 1.258904e-79 | 1.945440e-75 |
| MsG0180001548.01 | MsG0380014678.01 | 0.828503 | 8.670935e-55 | 8.635033e-52 |
| MsG0180001548.01 | MsG0380015024.01 | 0.855433 | 6.328854e-62 | 1.460981e-58 |
| MsG0180001548.01 | MsG0380015456.01 | 0.828404 | 9.161027e-55 | 9.097123e-52 |
| MsG0180001548.01 | MsG0380015847.01 | -0.808414 | 3.134110e-50 | 1.790880e-47 |
| MsG0180001548.01 | MsG0380016057.01 | 0.845639 | 3.582554e-59 | 6.009189e-56 |
| MsG0180001548.01 | MsG0380016172.01 | 0.824023 | 1.010442e-53 | 8.844553e-51 |
| MsG0180001548.01 | MsG0380016188.01 | -0.802165 | 6.385084e-49 | 3.106069e-46 |
| MsG0180001548.01 | MsG0380016545.01 | 0.807643 | 4.571896e-50 | 2.560040e-47 |
| MsG0180001548.01 | MsG0380016997.01 | 0.815873 | 7.396149e-52 | 5.160154e-49 |
| MsG0180001548.01 | MsG0380017014.01 | -0.838259 | 3.198194e-57 | 4.259865e-54 |
| MsG0180001548.01 | MsG0380017162.01 | 0.831987 | 1.221890e-55 | 1.347790e-52 |
| MsG0180001548.01 | MsG0380017338.01 | 0.830832 | 2.352147e-55 | 2.507105e-52 |
| MsG0180001548.01 | MsG0380017411.01 | -0.819455 | 1.151322e-52 | 8.864186e-50 |
| MsG0180001548.01 | MsG0380017427.01 | 0.911860 | 3.767728e-83 | 8.238677e-79 |
| MsG0180001548.01 | MsG0380017620.01 | 0.809306 | 2.019906e-50 | 1.181777e-47 |
| MsG0180001548.01 | MsG0380017683.01 | 0.812545 | 4.017034e-51 | 2.561455e-48 |
| MsG0180001548.01 | MsG0380017793.01 | 0.878262 | 3.238267e-69 | 1.679814e-65 |
| MsG0180001548.01 | MsG0480018337.01 | 0.933946 | 8.625925e-96 | 6.334818e-91 |
| MsG0180001548.01 | MsG0480018338.01 | 0.897805 | 9.844025e-77 | 1.130732e-72 |
| MsG0180001548.01 | MsG0480018426.01 | 0.853271 | 2.667845e-61 | 5.732456e-58 |
| MsG0180001548.01 | MsG0480018670.01 | 0.823406 | 1.409185e-53 | 1.212133e-50 |
| MsG0180001548.01 | MsG0480018676.01 | 0.825534 | 4.447232e-54 | 4.064643e-51 |
| MsG0180001548.01 | MsG0480019384.01 | 0.848830 | 4.773120e-60 | 8.871756e-57 |
| MsG0180001548.01 | MsG0480019644.01 | 0.838311 | 3.101474e-57 | 4.137601e-54 |
| MsG0180001548.01 | MsG0480019812.01 | 0.931100 | 6.212895e-94 | 3.843918e-89 |
| MsG0180001548.01 | MsG0480020473.01 | 0.903763 | 2.476913e-79 | 3.718473e-75 |
| MsG0180001548.01 | MsG0480020596.01 | 0.885056 | 1.129960e-71 | 7.640518e-68 |
| MsG0180001548.01 | MsG0480020797.01 | -0.848736 | 5.067307e-60 | 9.390190e-57 |
| MsG0180001548.01 | MsG0480021038.01 | 0.907360 | 5.512941e-81 | 9.747332e-77 |
| MsG0180001548.01 | MsG0480021101.01 | 0.854161 | 1.479828e-61 | 3.275533e-58 |
| MsG0180001548.01 | MsG0480021124.01 | 0.863666 | 2.114530e-64 | 6.462134e-61 |
| MsG0180001548.01 | MsG0480021154.01 | -0.801468 | 8.878822e-49 | 4.243341e-46 |
| MsG0180001548.01 | MsG0480021201.01 | 0.813881 | 2.045371e-51 | 1.351860e-48 |
| MsG0180001548.01 | MsG0480021213.01 | 0.921076 | 5.685253e-88 | 1.992263e-83 |
| MsG0180001548.01 | MsG0480021230.01 | -0.806113 | 9.629088e-50 | 5.183312e-47 |
| MsG0180001548.01 | MsG0480021248.01 | 0.822835 | 1.914622e-53 | 1.620812e-50 |
| MsG0180001548.01 | MsG0480021377.01 | 0.826420 | 2.740347e-54 | 2.568701e-51 |
| MsG0180001548.01 | MsG0480021652.01 | -0.805824 | 1.107794e-49 | 5.919334e-47 |
| MsG0180001548.01 | MsG0480021830.01 | 0.845989 | 2.879067e-59 | 4.884514e-56 |
| MsG0180001548.01 | MsG0480021967.01 | 0.839078 | 1.965115e-57 | 2.683848e-54 |
| MsG0180001548.01 | MsG0480022113.01 | 0.864626 | 1.061770e-64 | 3.356571e-61 |
| MsG0180001548.01 | MsG0480022154.01 | 0.888127 | 7.773702e-73 | 5.944363e-69 |
| MsG0180001548.01 | MsG0480022162.01 | 0.908659 | 1.342768e-81 | 2.517307e-77 |
| MsG0180001548.01 | MsG0480022240.01 | 0.879648 | 1.049848e-69 | 5.737126e-66 |
| MsG0180001548.01 | MsG0480022664.01 | 0.818474 | 1.923407e-52 | 1.441251e-49 |
| MsG0180001548.01 | MsG0480022763.01 | 0.801508 | 8.711043e-49 | 4.167483e-46 |
| MsG0180001548.01 | MsG0480022918.01 | 0.817383 | 3.393199e-52 | 2.467503e-49 |
| MsG0180001548.01 | MsG0480023169.01 | 0.828204 | 1.024022e-54 | 1.010925e-51 |
| MsG0180001548.01 | MsG0480023326.01 | 0.834015 | 3.825864e-56 | 4.482858e-53 |
| MsG0180001548.01 | MsG0480023406.01 | 0.856263 | 3.619795e-62 | 8.589307e-59 |
| MsG0180001548.01 | MsG0480023454.01 | -0.875290 | 3.461540e-68 | 1.607675e-64 |
| MsG0180001548.01 | MsG0480023466.01 | 0.878120 | 3.629759e-69 | 1.872210e-65 |
| MsG0180001548.01 | MsG0580024285.01 | 0.830767 | 2.439600e-55 | 2.595371e-52 |
| MsG0180001548.01 | MsG0580024340.01 | 0.828431 | 9.026320e-55 | 8.970314e-52 |
| MsG0180001548.01 | MsG0580024471.01 | 0.801202 | 1.006377e-48 | 4.777580e-46 |
| MsG0180001548.01 | MsG0580024598.01 | 0.847282 | 1.276474e-59 | 2.257368e-56 |
| MsG0180001548.01 | MsG0580024601.01 | 0.827395 | 1.602458e-54 | 1.545247e-51 |
| MsG0180001548.01 | MsG0580024872.01 | 0.881538 | 2.209256e-70 | 1.299491e-66 |
| MsG0180001548.01 | MsG0580025252.01 | 0.807873 | 4.086933e-50 | 2.302167e-47 |
| MsG0180001548.01 | MsG0580025280.01 | 0.833833 | 4.250489e-56 | 4.953568e-53 |
| MsG0180001548.01 | MsG0580025366.01 | 0.809257 | 2.069628e-50 | 1.209276e-47 |
| MsG0180001548.01 | MsG0580025558.01 | -0.824563 | 7.543876e-54 | 6.706641e-51 |
| MsG0180001548.01 | MsG0580025564.01 | 0.852136 | 5.626191e-61 | 1.164366e-57 |
| MsG0180001548.01 | MsG0580025565.01 | 0.822829 | 1.920987e-53 | 1.625951e-50 |
| MsG0180001548.01 | MsG0580025610.01 | 0.834216 | 3.407208e-56 | 4.016301e-53 |
| MsG0180001548.01 | MsG0580025627.01 | 0.818668 | 1.738085e-52 | 1.309291e-49 |
| MsG0180001548.01 | MsG0580026498.01 | 0.835308 | 1.810193e-56 | 2.205252e-53 |
| MsG0180001548.01 | MsG0580027183.01 | 0.876202 | 1.684375e-68 | 8.094699e-65 |
| MsG0180001548.01 | MsG0580027189.01 | 0.862643 | 4.383381e-64 | 1.292755e-60 |
| MsG0180001548.01 | MsG0580027884.01 | -0.819565 | 1.086736e-52 | 8.392448e-50 |
| MsG0180001548.01 | MsG0580027899.01 | 0.835255 | 1.866979e-56 | 2.270732e-53 |
| MsG0180001548.01 | MsG0580028419.01 | 0.850657 | 1.474064e-60 | 2.908163e-57 |
| MsG0180001548.01 | MsG0580028422.01 | 0.830322 | 3.134367e-55 | 3.291206e-52 |
| MsG0180001548.01 | MsG0580028423.01 | 0.817855 | 2.655455e-52 | 1.956117e-49 |
| MsG0180001548.01 | MsG0580028495.01 | 0.841466 | 4.672604e-58 | 6.872155e-55 |
| MsG0180001548.01 | MsG0580029001.01 | 0.808175 | 3.523855e-50 | 2.001087e-47 |
| MsG0180001548.01 | MsG0580029237.01 | 0.823447 | 1.378465e-53 | 1.187168e-50 |
| MsG0180001548.01 | MsG0580029511.01 | 0.856477 | 3.132734e-62 | 7.487849e-59 |
| MsG0180001548.01 | MsG0580029682.01 | 0.809713 | 1.651429e-50 | 9.767480e-48 |
| MsG0180001548.01 | MsG0580029734.01 | 0.817451 | 3.275336e-52 | 2.386231e-49 |
| MsG0180001548.01 | MsG0580029862.01 | 0.806990 | 6.289998e-50 | 3.462779e-47 |
| MsG0180001548.01 | MsG0580030063.01 | 0.818124 | 2.308434e-52 | 1.713039e-49 |
| MsG0180001548.01 | MsG0580030071.01 | 0.827212 | 1.772636e-54 | 1.700102e-51 |
| MsG0180001548.01 | MsG0680030464.01 | 0.802841 | 4.632770e-49 | 2.292907e-46 |
| MsG0180001548.01 | MsG0680030647.01 | 0.802585 | 5.233223e-49 | 2.573060e-46 |
| MsG0180001548.01 | MsG0680030907.01 | 0.858084 | 1.050176e-62 | 2.648701e-59 |
| MsG0180001548.01 | MsG0680031562.01 | 0.810025 | 1.414800e-50 | 8.436960e-48 |
| MsG0180001548.01 | MsG0680031826.01 | 0.850669 | 1.462073e-60 | 2.885636e-57 |
| MsG0180001548.01 | MsG0680032413.01 | 0.802449 | 5.581585e-49 | 2.734880e-46 |
| MsG0180001548.01 | MsG0680032769.01 | 0.809320 | 2.006091e-50 | 1.174145e-47 |
| MsG0180001548.01 | MsG0680032850.01 | 0.883059 | 6.182063e-71 | 3.859297e-67 |
| MsG0180001548.01 | MsG0680033852.01 | 0.845698 | 3.452103e-59 | 5.801988e-56 |
| MsG0180001548.01 | MsG0680034238.01 | -0.823103 | 1.658727e-53 | 1.414827e-50 |
| MsG0180001548.01 | MsG0680034759.01 | -0.862056 | 6.638035e-64 | 1.918069e-60 |
| MsG0180001548.01 | MsG0680035344.01 | -0.801447 | 8.967763e-49 | 4.283594e-46 |
| MsG0180001548.01 | MsG0680035532.01 | 0.826225 | 3.048637e-54 | 2.841761e-51 |
| MsG0180001548.01 | MsG0680035664.01 | 0.864442 | 1.212875e-64 | 3.809000e-61 |
| MsG0180001548.01 | MsG0680035665.01 | 0.866220 | 3.342452e-65 | 1.117775e-61 |
| MsG0180001548.01 | MsG0780035960.01 | 0.845057 | 5.147776e-59 | 8.475023e-56 |
| MsG0180001548.01 | MsG0780035965.01 | 0.876576 | 1.251394e-68 | 6.097390e-65 |
| MsG0180001548.01 | MsG0780036008.01 | 0.859464 | 4.063098e-63 | 1.074040e-59 |
| MsG0180001548.01 | MsG0780036620.01 | 0.868176 | 7.932213e-66 | 2.842651e-62 |
| MsG0180001548.01 | MsG0780036623.01 | 0.813178 | 2.918562e-51 | 1.892414e-48 |
| MsG0180001548.01 | MsG0780036666.01 | 0.847556 | 1.073466e-59 | 1.915300e-56 |
| MsG0180001548.01 | MsG0780036792.01 | 0.811145 | 8.105568e-51 | 4.978702e-48 |
| MsG0180001548.01 | MsG0780037052.01 | -0.874630 | 5.814261e-68 | 2.635868e-64 |
| MsG0180001548.01 | MsG0780037105.01 | 0.802793 | 4.739741e-49 | 2.342946e-46 |
| MsG0180001548.01 | MsG0780037351.01 | 0.836280 | 1.026479e-56 | 1.287663e-53 |
| MsG0180001548.01 | MsG0780037363.01 | 0.860323 | 2.238449e-63 | 6.094325e-60 |
| MsG0180001548.01 | MsG0780038056.01 | 0.820858 | 5.491889e-53 | 4.396706e-50 |
| MsG0180001548.01 | MsG0780038318.01 | -0.828255 | 9.952391e-55 | 9.839318e-52 |
| MsG0180001548.01 | MsG0780039161.01 | 0.854936 | 8.827673e-62 | 2.004206e-58 |
| MsG0180001548.01 | MsG0780039805.01 | 0.801711 | 7.913272e-49 | 3.805223e-46 |
| MsG0180001548.01 | MsG0780040105.01 | 0.863047 | 3.288205e-64 | 9.833769e-61 |
| MsG0180001548.01 | MsG0780040235.01 | 0.808090 | 3.673213e-50 | 2.081157e-47 |
| MsG0180001548.01 | MsG0780040295.01 | -0.805519 | 1.283452e-49 | 6.804103e-47 |
| MsG0180001548.01 | MsG0780040684.01 | 0.877467 | 6.140317e-69 | 3.090559e-65 |
| MsG0180001548.01 | MsG0780040965.01 | 0.885131 | 1.059165e-71 | 7.184189e-68 |
| MsG0180001548.01 | MsG0780041129.01 | 0.843079 | 1.747027e-58 | 2.702232e-55 |
| MsG0180001548.01 | MsG0780041331.01 | 0.912708 | 1.428595e-83 | 3.256431e-79 |
| MsG0180001548.01 | MsG0780041361.01 | 0.818056 | 2.391906e-52 | 1.771613e-49 |
| MsG0180001548.01 | MsG0780041385.01 | 0.837756 | 4.307584e-57 | 5.651411e-54 |
| MsG0180001548.01 | MsG0780041442.01 | 0.815538 | 8.782418e-52 | 6.071789e-49 |
| MsG0180001548.01 | MsG0780041747.01 | 0.808524 | 2.968506e-50 | 1.701197e-47 |
| MsG0180001548.01 | MsG0780041828.01 | 0.812956 | 3.266084e-51 | 2.105035e-48 |
| MsG0180001548.01 | MsG0880041847.01 | 0.864281 | 1.361174e-64 | 4.250364e-61 |
| MsG0180001548.01 | MsG0880042002.01 | 0.800977 | 1.118566e-48 | 5.280480e-46 |
| MsG0180001548.01 | MsG0880042044.01 | 0.805240 | 1.468577e-49 | 7.730062e-47 |
| MsG0180001548.01 | MsG0880042084.01 | 0.804702 | 1.902770e-49 | 9.877818e-47 |
| MsG0180001548.01 | MsG0880042086.01 | 0.907283 | 5.993403e-81 | 1.056167e-76 |
| MsG0180001548.01 | MsG0880042415.01 | 0.930405 | 1.719430e-93 | 1.017510e-88 |
| MsG0180001548.01 | MsG0880042416.01 | 0.845444 | 4.045871e-59 | 6.743473e-56 |
| MsG0180001548.01 | MsG0880042417.01 | 0.823086 | 1.674043e-53 | 1.427237e-50 |
| MsG0180001548.01 | MsG0880042512.01 | 0.896344 | 4.037998e-76 | 4.350118e-72 |
| MsG0180001548.01 | MsG0880042849.01 | -0.803057 | 4.180174e-49 | 2.080094e-46 |
| MsG0180001548.01 | MsG0880042948.01 | 0.800218 | 1.597658e-48 | 7.397736e-46 |
| MsG0180001548.01 | MsG0880043024.01 | 0.855559 | 5.818211e-62 | 1.348624e-58 |
| MsG0180001548.01 | MsG0880043056.01 | 0.818306 | 2.100156e-52 | 1.566314e-49 |
| MsG0180001548.01 | MsG0880043092.01 | 0.843791 | 1.127559e-58 | 1.783764e-55 |
| MsG0180001548.01 | MsG0880043107.01 | 0.876504 | 1.324926e-68 | 6.440069e-65 |
| MsG0180001548.01 | MsG0880043476.01 | 0.842521 | 2.457355e-58 | 3.735806e-55 |
| MsG0180001548.01 | MsG0880043621.01 | 0.801211 | 1.002323e-48 | 4.759428e-46 |
| MsG0180001548.01 | MsG0880043622.01 | 0.832878 | 7.352823e-56 | 8.326839e-53 |
| MsG0180001548.01 | MsG0880043650.01 | 0.820740 | 5.846173e-53 | 4.664513e-50 |
| MsG0180001548.01 | MsG0880043829.01 | 0.827654 | 1.388213e-54 | 1.348535e-51 |
| MsG0180001548.01 | MsG0880044099.01 | 0.808555 | 2.923582e-50 | 1.676754e-47 |
| MsG0180001548.01 | MsG0880044620.01 | 0.801685 | 8.011682e-49 | 3.849930e-46 |
| MsG0180001548.01 | MsG0880044834.01 | 0.831703 | 1.436117e-55 | 1.570909e-52 |
| MsG0180001548.01 | MsG0880044901.01 | -0.864388 | 1.260059e-64 | 3.949463e-61 |
| MsG0180001548.01 | MsG0880045031.01 | 0.815740 | 7.916660e-52 | 5.504003e-49 |
| MsG0180001548.01 | MsG0880045285.01 | 0.832494 | 9.155212e-56 | 1.025024e-52 |
| MsG0180001548.01 | MsG0880045312.01 | 0.905084 | 6.237043e-80 | 9.929078e-76 |
| MsG0180001548.01 | MsG0880045327.01 | 0.808530 | 2.960163e-50 | 1.696639e-47 |
| MsG0180001548.01 | MsG0880045402.01 | 0.805128 | 1.550371e-49 | 8.137306e-47 |
| MsG0180001548.01 | MsG0880045724.01 | -0.804400 | 2.199918e-49 | 1.133134e-46 |
| MsG0180001548.01 | MsG0880045927.01 | 0.819618 | 1.056543e-52 | 8.171050e-50 |
| MsG0180001548.01 | MsG0880045958.01 | -0.813714 | 2.225914e-51 | 1.464588e-48 |
| MsG0180001548.01 | MsG0880046124.01 | 0.863702 | 2.060868e-64 | 6.306621e-61 |
| MsG0180001548.01 | MsG0880046200.01 | 0.819625 | 1.052573e-52 | 8.141960e-50 |
| MsG0180001548.01 | MsG0880046324.01 | 0.811219 | 7.811498e-51 | 4.807531e-48 |
| MsG0180001548.01 | MsG0880046334.01 | -0.814398 | 1.571921e-51 | 1.053661e-48 |
| MsG0180001548.01 | MsG0880046408.01 | 0.845308 | 4.403106e-59 | 7.307383e-56 |
| MsG0180001548.01 | MsG0880046434.01 | -0.850538 | 1.591865e-60 | 3.128215e-57 |
| MsG0180001548.01 | MsG0880046946.01 | -0.831375 | 1.729663e-55 | 1.873539e-52 |
| MsG0180001548.01 | MsG0880047123.01 | -0.805100 | 1.571273e-49 | 8.240972e-47 |
| MsG0180001548.01 | MsG0880047312.01 | -0.849001 | 4.279674e-60 | 7.999779e-57 |
| MsG0180001548.01 | MsG0880047481.01 | -0.809563 | 1.778347e-50 | 1.047629e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180001548.01.T01 | MTR_1g038430 | 90.870 | 460 | 16 | 2 | 19 | 453 | 1 | 459 | 0.0 | 861 |
| MsG0180001548.01.T01 | MTR_2g083920 | 32.432 | 222 | 139 | 4 | 51 | 270 | 53 | 265 | 1.13e-29 | 118 |
| MsG0180001548.01.T01 | MTR_2g083920 | 31.858 | 226 | 143 | 4 | 51 | 274 | 53 | 269 | 5.72e-29 | 115 |
| MsG0180001548.01.T01 | MTR_4g080350 | 29.341 | 334 | 187 | 11 | 37 | 345 | 29 | 338 | 9.05e-29 | 116 |
| MsG0180001548.01.T01 | MTR_2g083920 | 33.333 | 180 | 109 | 4 | 93 | 270 | 2 | 172 | 4.78e-25 | 103 |
| MsG0180001548.01.T01 | MTR_1g038470 | 50.602 | 83 | 33 | 2 | 139 | 218 | 2 | 79 | 9.11e-17 | 79.0 |
| MsG0180001548.01.T01 | MTR_1g038510 | 81.081 | 37 | 7 | 0 | 179 | 215 | 102 | 138 | 1.58e-12 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180001548.01.T01 | AT5G23240 | 51.382 | 434 | 165 | 7 | 53 | 451 | 37 | 459 | 2.72e-148 | 431 |
| MsG0180001548.01.T01 | AT2G42750 | 31.944 | 216 | 136 | 4 | 57 | 270 | 65 | 271 | 2.48e-28 | 115 |
Find 95 sgRNAs with CRISPR-Local
Find 161 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCAGGATGAATGGAATTTA+TGG | 0.158588 | 1:+23106245 | None:intergenic |
| TGTAACAGTAGACATGTTTA+TGG | 0.185098 | 1:+23109051 | None:intergenic |
| CTTGTATTGCCTCATCAATT+TGG | 0.188254 | 1:+23107501 | None:intergenic |
| CTGACATTCTTGATTCTCTT+TGG | 0.194662 | 1:+23106373 | None:intergenic |
| TTTGCTATAGAATCAGTTTA+TGG | 0.202414 | 1:-23107563 | MsG0180001548.01.T01:CDS |
| CAATTTCCAATTGGTTATAT+TGG | 0.206460 | 1:-23106332 | MsG0180001548.01.T01:CDS |
| TTTGACTTGTATGATCTTCT+AGG | 0.212676 | 1:-23108899 | MsG0180001548.01.T01:CDS |
| CTCTTGGTTGCAATATATTT+TGG | 0.216199 | 1:-23105944 | MsG0180001548.01.T01:CDS |
| CCTGATATTGCTGGTCCTTC+TGG | 0.231877 | 1:-23108809 | MsG0180001548.01.T01:CDS |
| TTGTATTGCCTCATCAATTT+GGG | 0.271500 | 1:+23107502 | None:intergenic |
| CCATTCATCCTGAGGAATAT+TGG | 0.276497 | 1:-23106236 | MsG0180001548.01.T01:CDS |
| ACTGGCAATCCCCATCTAAT+TGG | 0.277395 | 1:+23106078 | None:intergenic |
| GAGATCCAACCTTGCTGCTT+TGG | 0.303926 | 1:-23107199 | MsG0180001548.01.T01:CDS |
| CCAGTGGTTACTTCCTTGTT+TGG | 0.324581 | 1:-23106060 | MsG0180001548.01.T01:CDS |
| ATGGTTTGAGTTTGAGAATA+AGG | 0.336019 | 1:+23109070 | None:intergenic |
| ATGAAAATAGTCCAATTAGA+TGG | 0.341134 | 1:-23106089 | MsG0180001548.01.T01:CDS |
| TTGGGGAGGTTCTCTAGCTT+TGG | 0.348620 | 1:-23105980 | MsG0180001548.01.T01:CDS |
| TGGAAATTGTCAACAGCTCT+TGG | 0.374457 | 1:-23105960 | MsG0180001548.01.T01:CDS |
| CCAGAAGGACCAGCAATATC+AGG | 0.385817 | 1:+23108809 | None:intergenic |
| TGGTCCTTCTGGTCATGATA+TGG | 0.387346 | 1:-23108798 | MsG0180001548.01.T01:CDS |
| GATACATGTAATATAAAGTT+AGG | 0.391057 | 1:-23105803 | MsG0180001548.01.T01:three_prime_UTR |
| TTCATTCACCTGAGAATACT+TGG | 0.395135 | 1:+23107041 | None:intergenic |
| TCAGGATGAATGGAATTTAT+GGG | 0.397759 | 1:+23106246 | None:intergenic |
| GCAAATGAAGGCTTCTCAAT+TGG | 0.409144 | 1:+23106159 | None:intergenic |
| AGTTGAGTTGAAAGAGCATT+GGG | 0.412413 | 1:-23105998 | MsG0180001548.01.T01:CDS |
| CGATGTCATCCTGATATTGC+TGG | 0.415641 | 1:-23108818 | MsG0180001548.01.T01:CDS |
| TTTCTCTACTCTTACATGTA+AGG | 0.416623 | 1:-23108957 | MsG0180001548.01.T01:CDS |
| AAACTAATTAACCTTATCAT+AGG | 0.425018 | 1:+23108721 | None:intergenic |
| TTCTTTCCTTTAGCAAATGA+AGG | 0.426387 | 1:+23106147 | None:intergenic |
| ACATTCTTGATTCTCTTTGG+AGG | 0.428803 | 1:+23106376 | None:intergenic |
| GGTTACTTCCTTGTTTGGTA+TGG | 0.431516 | 1:-23106055 | MsG0180001548.01.T01:CDS |
| GAAGGAAGAACAACAGTTGA+TGG | 0.432900 | 1:+23106210 | None:intergenic |
| CAATAAGATCAATTTCCAAT+TGG | 0.438959 | 1:-23106341 | MsG0180001548.01.T01:CDS |
| ACAGAATTCAAAGGCTTCAC+TGG | 0.440148 | 1:-23107698 | MsG0180001548.01.T01:CDS |
| GAGAAGCCTTCATTTGCTAA+AGG | 0.441147 | 1:-23106153 | MsG0180001548.01.T01:CDS |
| TCGATTTCTATTTCCAATGT+TGG | 0.441877 | 1:+23105873 | None:intergenic |
| CCAATATTCCTCAGGATGAA+TGG | 0.445444 | 1:+23106236 | None:intergenic |
| TCATAGGCAAAACGAGCAAA+TGG | 0.458278 | 1:+23108737 | None:intergenic |
| TGTTTGGTATGGCTGCAGTT+AGG | 0.458937 | 1:-23106044 | MsG0180001548.01.T01:CDS |
| TGAAAATAGTCCAATTAGAT+GGG | 0.463058 | 1:-23106088 | MsG0180001548.01.T01:CDS |
| GCAGTTAGGTTACATGAAGT+TGG | 0.469565 | 1:-23106030 | MsG0180001548.01.T01:CDS |
| GACGACCATTGTATTCAGTA+TGG | 0.471246 | 1:-23107676 | MsG0180001548.01.T01:CDS |
| GCAGCTACATGGTATGTGAT+TGG | 0.477504 | 1:-23105919 | MsG0180001548.01.T01:CDS |
| AAGGGTTGTTGTCGAATTTG+TGG | 0.483369 | 1:-23105896 | MsG0180001548.01.T01:CDS |
| AGCAAATGGATCGGAAAGAA+TGG | 0.495584 | 1:+23108751 | None:intergenic |
| CAATCATTTCATAATCCTCA+AGG | 0.504498 | 1:+23105659 | None:intergenic |
| GAACTCCAAAGCAGCAAGGT+TGG | 0.505248 | 1:+23107194 | None:intergenic |
| CTCAAACATATTTGTAGATG+TGG | 0.509300 | 1:-23107106 | MsG0180001548.01.T01:CDS |
| CAGTTGAGTTGAAAGAGCAT+TGG | 0.510120 | 1:-23105999 | MsG0180001548.01.T01:CDS |
| AGCGAGGGTTGTTTCTCAGT+GGG | 0.522430 | 1:-23107537 | MsG0180001548.01.T01:CDS |
| TGGTTGCCAATATAACCAAT+TGG | 0.524255 | 1:+23106326 | None:intergenic |
| AAAAGCTACCAAGTATTCTC+AGG | 0.534346 | 1:-23107049 | MsG0180001548.01.T01:intron |
| GATGGAGTCCAATATTCCTC+AGG | 0.534720 | 1:+23106228 | None:intergenic |
| CTACATGGTATGTGATTGGA+AGG | 0.538431 | 1:-23105915 | MsG0180001548.01.T01:CDS |
| GTCGATGAAGTGAAATGTGT+TGG | 0.540055 | 1:-23107620 | MsG0180001548.01.T01:CDS |
| AAACTGTTTGGGTCGCAGAA+AGG | 0.544914 | 1:+23105633 | None:intergenic |
| GTAGGTGCAAGTCATACAGC+AGG | 0.546276 | 1:-23107138 | MsG0180001548.01.T01:CDS |
| GTCGAATTTGTGGCCAACAT+TGG | 0.554187 | 1:-23105886 | MsG0180001548.01.T01:CDS |
| CAGGATGAATGGAATTTATG+GGG | 0.557366 | 1:+23106247 | None:intergenic |
| ACTTACGAAATGCAGTTGAC+AGG | 0.558378 | 1:+23107473 | None:intergenic |
| ATCAGTTTATGGAAGAGCGA+GGG | 0.575523 | 1:-23107552 | MsG0180001548.01.T01:CDS |
| TGTATTGCCTCATCAATTTG+GGG | 0.576513 | 1:+23107503 | None:intergenic |
| GTAGCAGTACTAGTTGAAGA+AGG | 0.585877 | 1:+23106192 | None:intergenic |
| ACATATTTGTAGATGTGGAG+AGG | 0.591397 | 1:-23107101 | MsG0180001548.01.T01:CDS |
| CCACGTGGCAATGTAAGAGT+AGG | 0.594070 | 1:-23107156 | MsG0180001548.01.T01:CDS |
| GAATAAGGTGTGGCAGCAAG+AGG | 0.595766 | 1:+23109085 | None:intergenic |
| AACTGCAGCCATACCAAACA+AGG | 0.596999 | 1:+23106047 | None:intergenic |
| CCAAACAAGGAAGTAACCAC+TGG | 0.597496 | 1:+23106060 | None:intergenic |
| GCAAAGATCACAGAATTCAA+AGG | 0.599426 | 1:-23107707 | MsG0180001548.01.T01:CDS |
| AATTAGATGGGGATTGCCAG+TGG | 0.600248 | 1:-23106076 | MsG0180001548.01.T01:CDS |
| TGGTTCACAAAGTGAGCAGA+GGG | 0.605945 | 1:-23107651 | MsG0180001548.01.T01:CDS |
| CATAAATTCCATTCATCCTG+AGG | 0.607786 | 1:-23106244 | MsG0180001548.01.T01:CDS |
| AATTCTGAATCGCAACCTTG+AGG | 0.612937 | 1:-23105674 | MsG0180001548.01.T01:three_prime_UTR |
| GAGCGAGGGTTGTTTCTCAG+TGG | 0.615315 | 1:-23107538 | MsG0180001548.01.T01:CDS |
| AAGGTTGCGATTCAGAATTG+TGG | 0.616696 | 1:+23105678 | None:intergenic |
| AATCAGTTTATGGAAGAGCG+AGG | 0.619371 | 1:-23107553 | MsG0180001548.01.T01:CDS |
| TAGAAATCGATAGAACTACA+AGG | 0.621083 | 1:-23105860 | MsG0180001548.01.T01:exon |
| GGCAAAACGAGCAAATGGAT+CGG | 0.622525 | 1:+23108742 | None:intergenic |
| AGGATGAATGGAATTTATGG+GGG | 0.638502 | 1:+23106248 | None:intergenic |
| GAGTTGAAAGAGCATTGGGG+AGG | 0.639356 | 1:-23105994 | MsG0180001548.01.T01:CDS |
| GAAAATAGTCCAATTAGATG+GGG | 0.640775 | 1:-23106087 | MsG0180001548.01.T01:CDS |
| CCATTGTATTCAGTATGGTG+TGG | 0.642033 | 1:-23107671 | MsG0180001548.01.T01:CDS |
| TTCTGAACCCCAAATTGATG+AGG | 0.645696 | 1:-23107510 | MsG0180001548.01.T01:CDS |
| ATAGCCATATCATGACCAGA+AGG | 0.649543 | 1:+23108794 | None:intergenic |
| GTGGTTCACAAAGTGAGCAG+AGG | 0.653730 | 1:-23107652 | MsG0180001548.01.T01:CDS |
| TCAAGAACTCCAAAGCAGCA+AGG | 0.655263 | 1:+23107190 | None:intergenic |
| AGAAATCGATAGAACTACAA+GGG | 0.665756 | 1:-23105859 | MsG0180001548.01.T01:exon |
| CCACACCATACTGAATACAA+TGG | 0.669300 | 1:+23107671 | None:intergenic |
| ATACAAGTCAAAATCCAACA+TGG | 0.696805 | 1:+23108910 | None:intergenic |
| GTTGAGTTGAAAGAGCATTG+GGG | 0.697316 | 1:-23105997 | MsG0180001548.01.T01:CDS |
| TGATCAGTCACAGATCAAGA+CGG | 0.698326 | 1:-23108861 | MsG0180001548.01.T01:CDS |
| TTGATGTCGAAGCAGCCACG+TGG | 0.734249 | 1:-23107171 | MsG0180001548.01.T01:CDS |
| CCTACTCTTACATTGCCACG+TGG | 0.735405 | 1:+23107156 | None:intergenic |
| TTGAGTTTGAGAATAAGGTG+TGG | 0.756744 | 1:+23109075 | None:intergenic |
| TACATGGTATGTGATTGGAA+GGG | 0.767981 | 1:-23105914 | MsG0180001548.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AACTATAAAAAATTTATATC+AGG | + | Chr1:23106197-23106216 | None:intergenic | 10.0% |
| !! | TTTATAACAAAATAACAATA+TGG | - | Chr1:23106801-23106820 | MsG0180001548.01.T01:intron | 10.0% |
| !! | AATTATTCAATGAATATACA+AGG | + | Chr1:23107471-23107490 | None:intergenic | 15.0% |
| !!! | AATATAATAGTTTGCATAAT+TGG | - | Chr1:23106606-23106625 | MsG0180001548.01.T01:intron | 15.0% |
| !!! | ATTGAATTCTTATTTGTTTT+TGG | - | Chr1:23106984-23107003 | MsG0180001548.01.T01:intron | 15.0% |
| !! | AAACTAATTAACCTTATCAT+AGG | + | Chr1:23106037-23106056 | None:intergenic | 20.0% |
| !! | AACTATAGACTAAAAAAAAC+AGG | + | Chr1:23106069-23106088 | None:intergenic | 20.0% |
| !! | ACAAATAAGAATTCAATTAG+AGG | + | Chr1:23106981-23107000 | None:intergenic | 20.0% |
| !! | GATACATGTAATATAAAGTT+AGG | - | Chr1:23108952-23108971 | MsG0180001548.01.T01:CDS | 20.0% |
| !! | TATGAAGACTTATCATATAA+GGG | - | Chr1:23108063-23108082 | MsG0180001548.01.T01:intron | 20.0% |
| !! | TTAGTACAATAATATCTGAT+TGG | + | Chr1:23106779-23106798 | None:intergenic | 20.0% |
| !!! | ATTCTTATTTGTTTTTGGTT+TGG | - | Chr1:23106989-23107008 | MsG0180001548.01.T01:intron | 20.0% |
| !!! | ATTGATTTTAGTATGTTTGA+AGG | - | Chr1:23107786-23107805 | MsG0180001548.01.T01:intron | 20.0% |
| !!! | TCTCTTTTTGTTTTTCTATT+TGG | + | Chr1:23108452-23108471 | None:intergenic | 20.0% |
| !!! | TTTTTTTTAGTCTATAGTTG+TGG | - | Chr1:23106070-23106089 | MsG0180001548.01.T01:CDS | 20.0% |
| ! | AAAGTGAGTTTATAGTGAAA+TGG | + | Chr1:23107964-23107983 | None:intergenic | 25.0% |
| ! | AATCTCTTAACTAAATGTCT+TGG | + | Chr1:23106908-23106927 | None:intergenic | 25.0% |
| ! | AATTTATCCTAAAGAGCTTA+TGG | - | Chr1:23108161-23108180 | MsG0180001548.01.T01:intron | 25.0% |
| ! | ATGAAAATAGTCCAATTAGA+TGG | - | Chr1:23108666-23108685 | MsG0180001548.01.T01:intron | 25.0% |
| ! | ATTATTTCCATAAGCTCTTT+AGG | + | Chr1:23108171-23108190 | None:intergenic | 25.0% |
| ! | CAATAAGATCAATTTCCAAT+TGG | - | Chr1:23108414-23108433 | MsG0180001548.01.T01:intron | 25.0% |
| ! | CAATTTCCAATTGGTTATAT+TGG | - | Chr1:23108423-23108442 | MsG0180001548.01.T01:intron | 25.0% |
| ! | CACTGAAAATCACAATATTA+TGG | + | Chr1:23106426-23106445 | None:intergenic | 25.0% |
| ! | GTATGAAGACTTATCATATA+AGG | - | Chr1:23108062-23108081 | MsG0180001548.01.T01:intron | 25.0% |
| ! | TAATTCACAGTGAAATAATG+AGG | + | Chr1:23108329-23108348 | None:intergenic | 25.0% |
| ! | TGAAAATAGTCCAATTAGAT+GGG | - | Chr1:23108667-23108686 | MsG0180001548.01.T01:intron | 25.0% |
| ! | TTCATATAAGCTATAAACTG+TGG | - | Chr1:23108134-23108153 | MsG0180001548.01.T01:intron | 25.0% |
| !! | ACTTAACAAAAGCACAAATT+TGG | + | Chr1:23106477-23106496 | None:intergenic | 25.0% |
| !! | TTAAGTTGTTTATCGAACAA+AGG | + | Chr1:23108029-23108048 | None:intergenic | 25.0% |
| !! | TTTGCTATAGAATCAGTTTA+TGG | - | Chr1:23107192-23107211 | MsG0180001548.01.T01:CDS | 25.0% |
| !!! | AATTCATGCTTTGAAGATTA+AGG | + | Chr1:23108306-23108325 | None:intergenic | 25.0% |
| !!! | ATTCATGCTTTGAAGATTAA+GGG | + | Chr1:23108305-23108324 | None:intergenic | 25.0% |
| !!! | GAATTTTTGGATTCACTTTT+TGG | - | Chr1:23107734-23107753 | MsG0180001548.01.T01:intron | 25.0% |
| !!! | TAGAAAAACAAGACTTGTTT+TGG | + | Chr1:23105771-23105790 | None:intergenic | 25.0% |
| !!! | TTTTGGAAATTTGAAGGTTT+TGG | + | Chr1:23105754-23105773 | None:intergenic | 25.0% |
| !!! | TTTTTTATAGTTCTCTGTCA+CGG | - | Chr1:23106205-23106224 | MsG0180001548.01.T01:CDS | 25.0% |
| AAAACACATTCGAACTTTGA+AGG | + | Chr1:23107880-23107899 | None:intergenic | 30.0% | |
| AAACATTTGTGAGACTGTAT+GGG | + | Chr1:23108243-23108262 | None:intergenic | 30.0% | |
| AGAAATCGATAGAACTACAA+GGG | - | Chr1:23108896-23108915 | MsG0180001548.01.T01:CDS | 30.0% | |
| ATACAAGTCAAAATCCAACA+TGG | + | Chr1:23105848-23105867 | None:intergenic | 30.0% | |
| CAATCATTTCATAATCCTCA+AGG | + | Chr1:23109099-23109118 | None:intergenic | 30.0% | |
| CTCAAACATATTTGTAGATG+TGG | - | Chr1:23107649-23107668 | MsG0180001548.01.T01:CDS | 30.0% | |
| CTGAGAATTGCAGTTAAATA+CGG | - | Chr1:23107401-23107420 | MsG0180001548.01.T01:intron | 30.0% | |
| CTGCTTGTAACTAAGAATTA+AGG | - | Chr1:23106942-23106961 | MsG0180001548.01.T01:intron | 30.0% | |
| GAAAATAGTCCAATTAGATG+GGG | - | Chr1:23108668-23108687 | MsG0180001548.01.T01:intron | 30.0% | |
| GCTTATAGTATGACAAAATG+TGG | - | Chr1:23107014-23107033 | MsG0180001548.01.T01:intron | 30.0% | |
| TAAACATTTGTGAGACTGTA+TGG | + | Chr1:23108244-23108263 | None:intergenic | 30.0% | |
| TAACTCAATCACTTTCACAT+TGG | - | Chr1:23107984-23108003 | MsG0180001548.01.T01:intron | 30.0% | |
| TAGAAATCGATAGAACTACA+AGG | - | Chr1:23108895-23108914 | MsG0180001548.01.T01:CDS | 30.0% | |
| TATTGTTCAACTCACTTTCA+CGG | - | Chr1:23107913-23107932 | MsG0180001548.01.T01:intron | 30.0% | |
| TCAAGTTAGAATCAACTCTA+CGG | + | Chr1:23107834-23107853 | None:intergenic | 30.0% | |
| TCAGGATGAATGGAATTTAT+GGG | + | Chr1:23108512-23108531 | None:intergenic | 30.0% | |
| TCGATTTCTATTTCCAATGT+TGG | + | Chr1:23108885-23108904 | None:intergenic | 30.0% | |
| TCTATTACTCATGTCATGTA+TGG | - | Chr1:23106110-23106129 | MsG0180001548.01.T01:CDS | 30.0% | |
| TGAAGGCAAGAGATTAAAAT+TGG | - | Chr1:23107803-23107822 | MsG0180001548.01.T01:intron | 30.0% | |
| TGGTGAAATACAAGTAAACA+CGG | + | Chr1:23106406-23106425 | None:intergenic | 30.0% | |
| TGTAACAGTAGACATGTTTA+TGG | + | Chr1:23105707-23105726 | None:intergenic | 30.0% | |
| TGTATAAACCATTCTGTACT+TGG | - | Chr1:23107324-23107343 | MsG0180001548.01.T01:intron | 30.0% | |
| TTCTTTCCTTTAGCAAATGA+AGG | + | Chr1:23108611-23108630 | None:intergenic | 30.0% | |
| TTGTATTGCCTCATCAATTT+GGG | + | Chr1:23107256-23107275 | None:intergenic | 30.0% | |
| TTTCTCTACTCTTACATGTA+AGG | - | Chr1:23105798-23105817 | MsG0180001548.01.T01:three_prime_UTR | 30.0% | |
| ! | ATGGTTTGAGTTTGAGAATA+AGG | + | Chr1:23105688-23105707 | None:intergenic | 30.0% |
| ! | CTCTTGGTTGCAATATATTT+TGG | - | Chr1:23108811-23108830 | MsG0180001548.01.T01:CDS | 30.0% |
| ! | TGTACAAAAGCTGTAGTTTT+AGG | - | Chr1:23106707-23106726 | MsG0180001548.01.T01:intron | 30.0% |
| ! | TTCTCAGGTGAATGAATTTT+TGG | - | Chr1:23107721-23107740 | MsG0180001548.01.T01:intron | 30.0% |
| !! | ATTTATGGGGGTTTTATGTT+TGG | + | Chr1:23108498-23108517 | None:intergenic | 30.0% |
| !! | CAAGATTTGTGCTATTTAGT+AGG | - | Chr1:23106568-23106587 | MsG0180001548.01.T01:intron | 30.0% |
| !! | TTTGACTTGTATGATCTTCT+AGG | - | Chr1:23105856-23105875 | MsG0180001548.01.T01:exon | 30.0% |
| !!! | GACTTGTTTTGGAAATTTGA+AGG | + | Chr1:23105760-23105779 | None:intergenic | 30.0% |
| AAAAGCTACCAAGTATTCTC+AGG | - | Chr1:23107706-23107725 | MsG0180001548.01.T01:CDS | 35.0% | |
| AAAGGCTAAGCATAAAAGAG+TGG | + | Chr1:23108011-23108030 | None:intergenic | 35.0% | |
| ACAAAAGAACATCTCTGTTC+AGG | - | Chr1:23108349-23108368 | MsG0180001548.01.T01:intron | 35.0% | |
| ACATATTTGTAGATGTGGAG+AGG | - | Chr1:23107654-23107673 | MsG0180001548.01.T01:CDS | 35.0% | |
| ACATTCTTGATTCTCTTTGG+AGG | + | Chr1:23108382-23108401 | None:intergenic | 35.0% | |
| ACTATGTAGAAGAGTCTAGT+CGG | - | Chr1:23106841-23106860 | MsG0180001548.01.T01:intron | 35.0% | |
| AGGATGAATGGAATTTATGG+GGG | + | Chr1:23108510-23108529 | None:intergenic | 35.0% | |
| ATATGAAGCCAAGTACAGAA+TGG | + | Chr1:23107335-23107354 | None:intergenic | 35.0% | |
| CAAGTTAGAATCAACTCTAC+GGG | + | Chr1:23107833-23107852 | None:intergenic | 35.0% | |
| CAGGATGAATGGAATTTATG+GGG | + | Chr1:23108511-23108530 | None:intergenic | 35.0% | |
| CATAAATTCCATTCATCCTG+AGG | - | Chr1:23108511-23108530 | MsG0180001548.01.T01:intron | 35.0% | |
| CTCAGGATGAATGGAATTTA+TGG | + | Chr1:23108513-23108532 | None:intergenic | 35.0% | |
| CTGACATTCTTGATTCTCTT+TGG | + | Chr1:23108385-23108404 | None:intergenic | 35.0% | |
| CTTGTATTGCCTCATCAATT+TGG | + | Chr1:23107257-23107276 | None:intergenic | 35.0% | |
| GCAAAGATCACAGAATTCAA+AGG | - | Chr1:23107048-23107067 | MsG0180001548.01.T01:intron | 35.0% | |
| TACATGGTATGTGATTGGAA+GGG | - | Chr1:23108841-23108860 | MsG0180001548.01.T01:CDS | 35.0% | |
| TGGTTGCCAATATAACCAAT+TGG | + | Chr1:23108432-23108451 | None:intergenic | 35.0% | |
| TGTATTGCCTCATCAATTTG+GGG | + | Chr1:23107255-23107274 | None:intergenic | 35.0% | |
| TTCATTCACCTGAGAATACT+TGG | + | Chr1:23107717-23107736 | None:intergenic | 35.0% | |
| TTGAGTTTGAGAATAAGGTG+TGG | + | Chr1:23105683-23105702 | None:intergenic | 35.0% | |
| ! | CAGCTAACAAAGCACATTTT+AGG | + | Chr1:23107164-23107183 | None:intergenic | 35.0% |
| !! | AAGTTTTTCAGCATCCATGT+TGG | - | Chr1:23105831-23105850 | MsG0180001548.01.T01:three_prime_UTR | 35.0% |
| !! | AGTTGAGTTGAAAGAGCATT+GGG | - | Chr1:23108757-23108776 | MsG0180001548.01.T01:CDS | 35.0% |
| !!! | ATATTTTGGTAGCAGCTACA+TGG | - | Chr1:23108825-23108844 | MsG0180001548.01.T01:CDS | 35.0% |
| AAGGGTTGTTGTCGAATTTG+TGG | - | Chr1:23108859-23108878 | MsG0180001548.01.T01:CDS | 40.0% | |
| AAGGTTGCGATTCAGAATTG+TGG | + | Chr1:23109080-23109099 | None:intergenic | 40.0% | |
| AATCAGTTTATGGAAGAGCG+AGG | - | Chr1:23107202-23107221 | MsG0180001548.01.T01:CDS | 40.0% | |
| AATTCTGAATCGCAACCTTG+AGG | - | Chr1:23109081-23109100 | MsG0180001548.01.T01:CDS | 40.0% | |
| ACAGAATTCAAAGGCTTCAC+TGG | - | Chr1:23107057-23107076 | MsG0180001548.01.T01:CDS | 40.0% | |
| ACTTACGAAATGCAGTTGAC+AGG | + | Chr1:23107285-23107304 | None:intergenic | 40.0% | |
| AGCAAATGGATCGGAAAGAA+TGG | + | Chr1:23106007-23106026 | None:intergenic | 40.0% | |
| AGTATGACAAAATGTGGTGC+AGG | - | Chr1:23107020-23107039 | MsG0180001548.01.T01:intron | 40.0% | |
| ATAGCCATATCATGACCAGA+AGG | + | Chr1:23105964-23105983 | None:intergenic | 40.0% | |
| ATCAGTTTATGGAAGAGCGA+GGG | - | Chr1:23107203-23107222 | MsG0180001548.01.T01:CDS | 40.0% | |
| CAATTCTAGCGCAGATAGAT+CGG | + | Chr1:23106299-23106318 | None:intergenic | 40.0% | |
| CCAATATTCCTCAGGATGAA+TGG | + | Chr1:23108522-23108541 | None:intergenic | 40.0% | |
| CCACACCATACTGAATACAA+TGG | + | Chr1:23107087-23107106 | None:intergenic | 40.0% | |
| CCATTCATCCTGAGGAATAT+TGG | - | Chr1:23108519-23108538 | MsG0180001548.01.T01:intron | 40.0% | |
| CCATTGTATTCAGTATGGTG+TGG | - | Chr1:23107084-23107103 | MsG0180001548.01.T01:CDS | 40.0% | |
| CTACATGGTATGTGATTGGA+AGG | - | Chr1:23108840-23108859 | MsG0180001548.01.T01:CDS | 40.0% | |
| GAAGGAAGAACAACAGTTGA+TGG | + | Chr1:23108548-23108567 | None:intergenic | 40.0% | |
| GACGACCATTGTATTCAGTA+TGG | - | Chr1:23107079-23107098 | MsG0180001548.01.T01:CDS | 40.0% | |
| GCAAATGAAGGCTTCTCAAT+TGG | + | Chr1:23108599-23108618 | None:intergenic | 40.0% | |
| GCAGTTAGGTTACATGAAGT+TGG | - | Chr1:23108725-23108744 | MsG0180001548.01.T01:intron | 40.0% | |
| GTAGCAGTACTAGTTGAAGA+AGG | + | Chr1:23108566-23108585 | None:intergenic | 40.0% | |
| GTCGATGAAGTGAAATGTGT+TGG | - | Chr1:23107135-23107154 | MsG0180001548.01.T01:CDS | 40.0% | |
| TCATAGGCAAAACGAGCAAA+TGG | + | Chr1:23106021-23106040 | None:intergenic | 40.0% | |
| TGATCAGTCACAGATCAAGA+CGG | - | Chr1:23105894-23105913 | MsG0180001548.01.T01:CDS | 40.0% | |
| TGGAAATTGTCAACAGCTCT+TGG | - | Chr1:23108795-23108814 | MsG0180001548.01.T01:CDS | 40.0% | |
| TGTCTATGCGACAACAATTG+AGG | + | Chr1:23107427-23107446 | None:intergenic | 40.0% | |
| TTCTGAACCCCAAATTGATG+AGG | - | Chr1:23107245-23107264 | MsG0180001548.01.T01:intron | 40.0% | |
| ! | GAGAAGCCTTCATTTGCTAA+AGG | - | Chr1:23108602-23108621 | MsG0180001548.01.T01:intron | 40.0% |
| ! | GGTTACTTCCTTGTTTGGTA+TGG | - | Chr1:23108700-23108719 | MsG0180001548.01.T01:intron | 40.0% |
| ! | TCGGATGGATCGATTTAACA+GGG | - | Chr1:23106860-23106879 | MsG0180001548.01.T01:intron | 40.0% |
| ! | TGCTCGTTTTGCCTATGATA+AGG | - | Chr1:23106023-23106042 | MsG0180001548.01.T01:CDS | 40.0% |
| !! | ATGCTTTGAAGATTAAGGGC+TGG | + | Chr1:23108301-23108320 | None:intergenic | 40.0% |
| !! | CAGTTGAGTTGAAAGAGCAT+TGG | - | Chr1:23108756-23108775 | MsG0180001548.01.T01:CDS | 40.0% |
| !! | GTTGAGTTGAAAGAGCATTG+GGG | - | Chr1:23108758-23108777 | MsG0180001548.01.T01:CDS | 40.0% |
| !! | TTGAAGATTAAGGGCTGGTT+TGG | + | Chr1:23108296-23108315 | None:intergenic | 40.0% |
| !!! | GAAGGTTTTGGAGTGAAGAA+AGG | + | Chr1:23105742-23105761 | None:intergenic | 40.0% |
| AACTGCAGCCATACCAAACA+AGG | + | Chr1:23108711-23108730 | None:intergenic | 45.0% | |
| AATTAGATGGGGATTGCCAG+TGG | - | Chr1:23108679-23108698 | MsG0180001548.01.T01:intron | 45.0% | |
| ACTGGCAATCCCCATCTAAT+TGG | + | Chr1:23108680-23108699 | None:intergenic | 45.0% | |
| CCAAACAAGGAAGTAACCAC+TGG | + | Chr1:23108698-23108717 | None:intergenic | 45.0% | |
| CCAGTGGTTACTTCCTTGTT+TGG | - | Chr1:23108695-23108714 | MsG0180001548.01.T01:intron | 45.0% | |
| CGATGTCATCCTGATATTGC+TGG | - | Chr1:23105937-23105956 | MsG0180001548.01.T01:CDS | 45.0% | |
| GATGGAGTCCAATATTCCTC+AGG | + | Chr1:23108530-23108549 | None:intergenic | 45.0% | |
| GCAGCTACATGGTATGTGAT+TGG | - | Chr1:23108836-23108855 | MsG0180001548.01.T01:CDS | 45.0% | |
| GGCAAAACGAGCAAATGGAT+CGG | + | Chr1:23106016-23106035 | None:intergenic | 45.0% | |
| GTCGAATTTGTGGCCAACAT+TGG | - | Chr1:23108869-23108888 | MsG0180001548.01.T01:CDS | 45.0% | |
| GTGAGATAGTACGATCTCGA+AGG | - | Chr1:23106334-23106353 | MsG0180001548.01.T01:CDS | 45.0% | |
| TCAAGAACTCCAAAGCAGCA+AGG | + | Chr1:23107568-23107587 | None:intergenic | 45.0% | |
| TGGTCCTTCTGGTCATGATA+TGG | - | Chr1:23105957-23105976 | MsG0180001548.01.T01:CDS | 45.0% | |
| TGGTTCACAAAGTGAGCAGA+GGG | - | Chr1:23107104-23107123 | MsG0180001548.01.T01:CDS | 45.0% | |
| TGTAGAAGAGTCTAGTCGGA+TGG | - | Chr1:23106845-23106864 | MsG0180001548.01.T01:intron | 45.0% | |
| TGTTTGGTATGGCTGCAGTT+AGG | - | Chr1:23108711-23108730 | MsG0180001548.01.T01:intron | 45.0% | |
| ! | GTCGGATGGATCGATTTAAC+AGG | - | Chr1:23106859-23106878 | MsG0180001548.01.T01:intron | 45.0% |
| CCACGTGGCAATGTAAGAGT+AGG | - | Chr1:23107599-23107618 | MsG0180001548.01.T01:CDS | 50.0% | |
| CCAGAAGGACCAGCAATATC+AGG | + | Chr1:23105949-23105968 | None:intergenic | 50.0% | |
| CCTACTCTTACATTGCCACG+TGG | + | Chr1:23107602-23107621 | None:intergenic | 50.0% | |
| CCTGATATTGCTGGTCCTTC+TGG | - | Chr1:23105946-23105965 | MsG0180001548.01.T01:CDS | 50.0% | |
| GAACTCCAAAGCAGCAAGGT+TGG | + | Chr1:23107564-23107583 | None:intergenic | 50.0% | |
| GAATAAGGTGTGGCAGCAAG+AGG | + | Chr1:23105673-23105692 | None:intergenic | 50.0% | |
| GTAGGTGCAAGTCATACAGC+AGG | - | Chr1:23107617-23107636 | MsG0180001548.01.T01:CDS | 50.0% | |
| GTGGTTCACAAAGTGAGCAG+AGG | - | Chr1:23107103-23107122 | MsG0180001548.01.T01:CDS | 50.0% | |
| ! | GAGATCCAACCTTGCTGCTT+TGG | - | Chr1:23107556-23107575 | MsG0180001548.01.T01:CDS | 50.0% |
| ! | TTGGGGAGGTTCTCTAGCTT+TGG | - | Chr1:23108775-23108794 | MsG0180001548.01.T01:CDS | 50.0% |
| !! | AGCGAGGGTTGTTTCTCAGT+GGG | - | Chr1:23107218-23107237 | MsG0180001548.01.T01:intron | 50.0% |
| !! | GAGTTGAAAGAGCATTGGGG+AGG | - | Chr1:23108761-23108780 | MsG0180001548.01.T01:CDS | 50.0% |
| GGCTATTGTAGTCGCAGCTG+TGG | + | Chr1:23106385-23106404 | None:intergenic | 55.0% | |
| TTGATGTCGAAGCAGCCACG+TGG | - | Chr1:23107584-23107603 | MsG0180001548.01.T01:CDS | 55.0% | |
| !! | GAGCGAGGGTTGTTTCTCAG+TGG | - | Chr1:23107217-23107236 | MsG0180001548.01.T01:intron | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr1 | gene | 23105644 | 23109133 | 23105644 | ID=MsG0180001548.01;Name=MsG0180001548.01 |
| Chr1 | mRNA | 23105644 | 23109133 | 23105644 | ID=MsG0180001548.01.T01;Parent=MsG0180001548.01;Name=MsG0180001548.01.T01;_AED=0.30;_eAED=0.30;_QI=14|0.66|0.75|1|1|1|4|226|453 |
| Chr1 | exon | 23105644 | 23106406 | 23105644 | ID=MsG0180001548.01.T01:exon:40426;Parent=MsG0180001548.01.T01 |
| Chr1 | exon | 23107050 | 23107230 | 23107050 | ID=MsG0180001548.01.T01:exon:40425;Parent=MsG0180001548.01.T01 |
| Chr1 | exon | 23107479 | 23107735 | 23107479 | ID=MsG0180001548.01.T01:exon:40424;Parent=MsG0180001548.01.T01 |
| Chr1 | exon | 23108733 | 23109133 | 23108733 | ID=MsG0180001548.01.T01:exon:40423;Parent=MsG0180001548.01.T01 |
| Chr1 | five_prime_UTR | 23109120 | 23109133 | 23109120 | ID=MsG0180001548.01.T01:five_prime_utr;Parent=MsG0180001548.01.T01 |
| Chr1 | CDS | 23108733 | 23109119 | 23108733 | ID=MsG0180001548.01.T01:cds;Parent=MsG0180001548.01.T01 |
| Chr1 | CDS | 23107479 | 23107735 | 23107479 | ID=MsG0180001548.01.T01:cds;Parent=MsG0180001548.01.T01 |
| Chr1 | CDS | 23107050 | 23107230 | 23107050 | ID=MsG0180001548.01.T01:cds;Parent=MsG0180001548.01.T01 |
| Chr1 | CDS | 23105870 | 23106406 | 23105870 | ID=MsG0180001548.01.T01:cds;Parent=MsG0180001548.01.T01 |
| Chr1 | three_prime_UTR | 23105644 | 23105869 | 23105644 | ID=MsG0180001548.01.T01:three_prime_utr;Parent=MsG0180001548.01.T01 |
| Gene Sequence |
| Protein sequence |
