Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0480021744.01.T01 | XP_013456530.1 | 86.957 | 368 | 15 | 3 | 1 | 336 | 1 | 367 | 0 | 637 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0480021744.01.T01 | Q84WM7 | 49.444 | 360 | 145 | 5 | 11 | 336 | 5 | 361 | 6.10E-122 | 358 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0480021744.01.T01 | A0A072UME4 | 86.957 | 368 | 15 | 3 | 1 | 336 | 1 | 367 | 0.0 | 637 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0480021744.01.T01 | MTR_4g074290 | 86.957 | 368 | 15 | 3 | 1 | 336 | 1 | 367 | 0.0 | 637 |
MsG0480021744.01.T01 | MTR_0009s0350 | 80.707 | 368 | 38 | 3 | 1 | 336 | 1 | 367 | 0.0 | 605 |
MsG0480021744.01.T01 | MTR_0009s0340 | 80.707 | 368 | 38 | 3 | 1 | 336 | 1 | 367 | 0.0 | 605 |
MsG0480021744.01.T01 | MTR_2g073390 | 77.717 | 368 | 49 | 2 | 1 | 336 | 1 | 367 | 0.0 | 586 |
MsG0480021744.01.T01 | MTR_4g124740 | 43.849 | 317 | 129 | 5 | 58 | 336 | 40 | 345 | 2.14e-91 | 276 |
MsG0480021744.01.T01 | MTR_8g102380 | 36.644 | 292 | 142 | 3 | 80 | 330 | 88 | 377 | 4.58e-62 | 202 |
MsG0480021744.01.T01 | MTR_6g024165 | 38.535 | 314 | 152 | 5 | 58 | 333 | 27 | 337 | 1.30e-61 | 200 |
MsG0480021744.01.T01 | MTR_6g088810 | 36.207 | 290 | 144 | 3 | 80 | 330 | 90 | 377 | 2.62e-61 | 201 |
MsG0480021744.01.T01 | MTR_1g086540 | 36.000 | 350 | 167 | 6 | 37 | 333 | 2 | 347 | 3.37e-61 | 199 |
MsG0480021744.01.T01 | MTR_5g012600 | 35.082 | 305 | 156 | 4 | 68 | 332 | 59 | 361 | 5.22e-56 | 186 |
MsG0480021744.01.T01 | MTR_7g092780 | 33.445 | 299 | 158 | 3 | 72 | 330 | 90 | 387 | 2.88e-55 | 185 |
MsG0480021744.01.T01 | MTR_7g102600 | 32.192 | 292 | 160 | 4 | 77 | 331 | 104 | 394 | 2.79e-52 | 177 |
MsG0480021744.01.T01 | MTR_7g011530 | 33.446 | 296 | 144 | 6 | 69 | 319 | 3 | 290 | 4.73e-52 | 174 |
MsG0480021744.01.T01 | MTR_5g095490 | 34.576 | 295 | 147 | 5 | 78 | 330 | 67 | 357 | 4.85e-52 | 176 |
MsG0480021744.01.T01 | MTR_6g012800 | 31.438 | 299 | 152 | 5 | 71 | 324 | 5 | 295 | 1.13e-48 | 166 |
MsG0480021744.01.T01 | MTR_8g102380 | 36.214 | 243 | 112 | 3 | 80 | 281 | 88 | 328 | 1.17e-45 | 158 |
MsG0480021744.01.T01 | MTR_8g036225 | 32.432 | 296 | 169 | 4 | 70 | 334 | 31 | 326 | 3.77e-45 | 157 |
MsG0480021744.01.T01 | MTR_1g033050 | 32.686 | 309 | 171 | 5 | 58 | 330 | 1 | 308 | 2.40e-44 | 154 |
MsG0480021744.01.T01 | MTR_2g033970 | 31.935 | 310 | 176 | 4 | 55 | 330 | 38 | 346 | 2.55e-41 | 147 |
MsG0480021744.01.T01 | MTR_6g042690 | 32.292 | 288 | 157 | 5 | 72 | 325 | 39 | 322 | 7.98e-40 | 143 |
MsG0480021744.01.T01 | MTR_6g042660 | 31.597 | 288 | 161 | 8 | 78 | 334 | 43 | 325 | 6.57e-39 | 140 |
MsG0480021744.01.T01 | MTR_2g436600 | 31.511 | 311 | 167 | 7 | 55 | 330 | 37 | 336 | 1.09e-38 | 140 |
MsG0480021744.01.T01 | MTR_5g088300 | 33.564 | 289 | 169 | 4 | 70 | 336 | 35 | 322 | 1.41e-38 | 139 |
MsG0480021744.01.T01 | MTR_5g083620 | 31.475 | 305 | 154 | 8 | 74 | 330 | 48 | 345 | 5.59e-38 | 139 |
MsG0480021744.01.T01 | MTR_1g086190 | 30.565 | 301 | 160 | 5 | 74 | 330 | 257 | 552 | 2.62e-37 | 140 |
MsG0480021744.01.T01 | MTR_5g088280 | 32.404 | 287 | 167 | 6 | 72 | 333 | 39 | 323 | 2.11e-36 | 134 |
MsG0480021744.01.T01 | MTR_5g088290 | 31.879 | 298 | 159 | 6 | 72 | 336 | 48 | 334 | 2.55e-35 | 131 |
MsG0480021744.01.T01 | MTR_4g051810 | 30.584 | 291 | 178 | 6 | 69 | 336 | 34 | 323 | 2.86e-34 | 128 |
MsG0480021744.01.T01 | MTR_6g025590 | 40.217 | 184 | 68 | 2 | 58 | 202 | 35 | 215 | 7.68e-34 | 125 |
MsG0480021744.01.T01 | MTR_8g088610 | 29.677 | 310 | 154 | 9 | 74 | 330 | 67 | 365 | 7.78e-34 | 128 |
MsG0480021744.01.T01 | MTR_4g087970 | 28.261 | 368 | 194 | 10 | 12 | 330 | 160 | 506 | 2.43e-33 | 129 |
MsG0480021744.01.T01 | MTR_4g025690 | 29.747 | 316 | 183 | 8 | 59 | 336 | 193 | 507 | 6.32e-33 | 128 |
MsG0480021744.01.T01 | MTR_2g436040 | 30.851 | 282 | 147 | 8 | 65 | 303 | 224 | 500 | 1.14e-32 | 128 |
MsG0480021744.01.T01 | MTR_8g023310 | 28.667 | 300 | 173 | 6 | 72 | 330 | 279 | 578 | 2.36e-32 | 127 |
MsG0480021744.01.T01 | MTR_2g044660 | 29.236 | 301 | 165 | 9 | 72 | 327 | 327 | 624 | 1.89e-31 | 124 |
MsG0480021744.01.T01 | MTR_7g050870 | 28.344 | 314 | 158 | 8 | 72 | 330 | 242 | 543 | 3.10e-31 | 124 |
MsG0480021744.01.T01 | MTR_4g087980 | 28.000 | 350 | 194 | 10 | 25 | 330 | 170 | 505 | 3.37e-31 | 123 |
MsG0480021744.01.T01 | MTR_7g050950 | 29.642 | 307 | 162 | 10 | 72 | 330 | 242 | 542 | 3.57e-31 | 123 |
MsG0480021744.01.T01 | MTR_3g033690 | 27.907 | 344 | 183 | 11 | 36 | 330 | 188 | 515 | 3.71e-31 | 123 |
MsG0480021744.01.T01 | MTR_7g050980 | 28.808 | 302 | 172 | 8 | 72 | 330 | 243 | 544 | 5.61e-31 | 123 |
MsG0480021744.01.T01 | MTR_4g035980 | 30.503 | 318 | 166 | 10 | 62 | 330 | 217 | 528 | 7.30e-31 | 122 |
MsG0480021744.01.T01 | MTR_3g091380 | 30.030 | 333 | 167 | 10 | 51 | 330 | 267 | 586 | 8.53e-31 | 122 |
MsG0480021744.01.T01 | MTR_5g093970 | 28.620 | 297 | 182 | 6 | 69 | 336 | 40 | 335 | 9.28e-31 | 119 |
MsG0480021744.01.T01 | MTR_3g008720 | 27.616 | 344 | 184 | 11 | 36 | 330 | 189 | 516 | 1.04e-30 | 122 |
MsG0480021744.01.T01 | MTR_1g086210 | 28.188 | 298 | 163 | 5 | 74 | 325 | 255 | 547 | 1.98e-30 | 121 |
MsG0480021744.01.T01 | MTR_7g053360 | 27.326 | 344 | 185 | 10 | 36 | 330 | 189 | 516 | 2.19e-30 | 121 |
MsG0480021744.01.T01 | MTR_7g110560 | 29.221 | 308 | 162 | 9 | 71 | 330 | 239 | 538 | 2.27e-30 | 121 |
MsG0480021744.01.T01 | MTR_7g108905 | 28.383 | 303 | 166 | 8 | 74 | 330 | 248 | 545 | 2.93e-30 | 120 |
MsG0480021744.01.T01 | MTR_2g044810 | 27.778 | 306 | 171 | 7 | 70 | 330 | 223 | 523 | 6.51e-30 | 119 |
MsG0480021744.01.T01 | MTR_3g008640 | 27.326 | 344 | 185 | 11 | 36 | 330 | 189 | 516 | 8.72e-30 | 119 |
MsG0480021744.01.T01 | MTR_3g008700 | 27.035 | 344 | 186 | 11 | 36 | 330 | 189 | 516 | 1.23e-29 | 119 |
MsG0480021744.01.T01 | MTR_1g083520 | 29.126 | 309 | 164 | 6 | 72 | 330 | 214 | 517 | 1.84e-29 | 118 |
MsG0480021744.01.T01 | MTR_4g120290 | 25.610 | 328 | 178 | 6 | 10 | 295 | 215 | 518 | 2.58e-29 | 118 |
MsG0480021744.01.T01 | MTR_4g120280 | 26.829 | 328 | 174 | 8 | 10 | 295 | 215 | 518 | 3.20e-29 | 118 |
MsG0480021744.01.T01 | MTR_1g008140 | 29.129 | 333 | 171 | 10 | 51 | 330 | 276 | 596 | 3.76e-29 | 118 |
MsG0480021744.01.T01 | MTR_2g436050 | 28.349 | 321 | 163 | 9 | 25 | 303 | 223 | 518 | 5.67e-29 | 117 |
MsG0480021744.01.T01 | MTR_3g010780 | 25.763 | 295 | 183 | 5 | 72 | 330 | 269 | 563 | 6.16e-29 | 117 |
MsG0480021744.01.T01 | MTR_7g112580 | 27.798 | 277 | 167 | 5 | 59 | 303 | 226 | 501 | 6.90e-29 | 117 |
MsG0480021744.01.T01 | MTR_8g042900 | 27.119 | 295 | 179 | 6 | 72 | 330 | 276 | 570 | 7.00e-29 | 117 |
MsG0480021744.01.T01 | MTR_7g110490 | 29.283 | 321 | 161 | 9 | 65 | 335 | 253 | 557 | 1.13e-28 | 116 |
MsG0480021744.01.T01 | MTR_7g110510 | 29.283 | 321 | 161 | 9 | 65 | 335 | 253 | 557 | 1.13e-28 | 116 |
MsG0480021744.01.T01 | MTR_7g110440 | 27.922 | 308 | 165 | 8 | 74 | 335 | 261 | 557 | 2.39e-28 | 115 |
MsG0480021744.01.T01 | MTR_7g108875 | 27.832 | 309 | 168 | 8 | 71 | 330 | 251 | 553 | 4.67e-28 | 114 |
MsG0480021744.01.T01 | MTR_2g044880 | 27.273 | 319 | 179 | 8 | 59 | 330 | 202 | 514 | 9.54e-28 | 113 |
MsG0480021744.01.T01 | MTR_8g104645 | 28.159 | 277 | 148 | 6 | 72 | 303 | 61 | 331 | 2.80e-27 | 110 |
MsG0480021744.01.T01 | MTR_4g025670 | 29.373 | 303 | 166 | 10 | 74 | 330 | 178 | 478 | 3.76e-27 | 111 |
MsG0480021744.01.T01 | MTR_4g025730 | 25.073 | 343 | 197 | 10 | 33 | 330 | 171 | 498 | 4.19e-27 | 111 |
MsG0480021744.01.T01 | MTR_7g108890 | 27.673 | 318 | 181 | 8 | 57 | 330 | 239 | 551 | 7.28e-27 | 111 |
MsG0480021744.01.T01 | MTR_7g112590 | 26.316 | 304 | 177 | 8 | 72 | 330 | 271 | 572 | 8.22e-27 | 111 |
MsG0480021744.01.T01 | MTR_1g083510 | 26.537 | 309 | 169 | 8 | 72 | 330 | 272 | 572 | 1.06e-26 | 110 |
MsG0480021744.01.T01 | MTR_1g083470 | 29.225 | 284 | 139 | 10 | 72 | 303 | 257 | 530 | 2.60e-26 | 109 |
MsG0480021744.01.T01 | MTR_1g083500 | 29.225 | 284 | 139 | 10 | 72 | 303 | 257 | 530 | 2.60e-26 | 109 |
MsG0480021744.01.T01 | MTR_4g124550 | 24.665 | 373 | 228 | 10 | 1 | 330 | 220 | 582 | 3.04e-26 | 109 |
MsG0480021744.01.T01 | MTR_4g005170 | 29.225 | 284 | 139 | 10 | 72 | 303 | 262 | 535 | 4.44e-26 | 109 |
MsG0480021744.01.T01 | MTR_7g110420 | 29.710 | 276 | 148 | 7 | 74 | 303 | 261 | 536 | 6.50e-26 | 108 |
MsG0480021744.01.T01 | MTR_1g083490 | 28.521 | 284 | 141 | 10 | 72 | 303 | 262 | 535 | 9.60e-26 | 108 |
MsG0480021744.01.T01 | MTR_7g108900 | 29.936 | 314 | 156 | 12 | 71 | 330 | 246 | 549 | 1.12e-25 | 107 |
MsG0480021744.01.T01 | MTR_4g124520 | 27.922 | 308 | 168 | 9 | 71 | 330 | 209 | 510 | 1.33e-25 | 107 |
MsG0480021744.01.T01 | MTR_8g093460 | 26.230 | 305 | 166 | 7 | 80 | 330 | 241 | 540 | 1.37e-25 | 107 |
MsG0480021744.01.T01 | MTR_8g104655 | 26.780 | 295 | 160 | 7 | 59 | 303 | 212 | 500 | 3.16e-25 | 106 |
MsG0480021744.01.T01 | MTR_3g095920 | 27.419 | 310 | 161 | 10 | 78 | 330 | 251 | 553 | 4.77e-25 | 106 |
MsG0480021744.01.T01 | MTR_4g005180 | 28.772 | 285 | 141 | 10 | 72 | 304 | 244 | 518 | 8.47e-25 | 105 |
MsG0480021744.01.T01 | MTR_1g054880 | 27.974 | 311 | 169 | 8 | 69 | 330 | 243 | 547 | 1.67e-24 | 104 |
MsG0480021744.01.T01 | MTR_8g023150 | 26.578 | 301 | 172 | 6 | 74 | 330 | 276 | 571 | 2.90e-23 | 100 |
MsG0480021744.01.T01 | MTR_2g044810 | 30.415 | 217 | 134 | 6 | 126 | 330 | 243 | 454 | 4.36e-23 | 99.8 |
MsG0480021744.01.T01 | MTR_0618s0020 | 30.159 | 189 | 115 | 4 | 126 | 303 | 5 | 187 | 2.19e-22 | 94.0 |
MsG0480021744.01.T01 | MTR_1g088020 | 29.242 | 277 | 143 | 7 | 76 | 305 | 247 | 517 | 2.57e-22 | 98.2 |
MsG0480021744.01.T01 | MTR_3g010770 | 28.571 | 217 | 138 | 5 | 126 | 330 | 353 | 564 | 1.90e-21 | 95.5 |
MsG0480021744.01.T01 | MTR_2g105560 | 26.389 | 288 | 170 | 7 | 78 | 330 | 48 | 328 | 2.15e-21 | 93.6 |
MsG0480021744.01.T01 | MTR_1g088225 | 26.821 | 302 | 168 | 7 | 76 | 330 | 247 | 542 | 2.77e-21 | 95.1 |
MsG0480021744.01.T01 | MTR_0458s0030 | 29.954 | 217 | 135 | 5 | 126 | 330 | 92 | 303 | 1.51e-20 | 90.9 |
MsG0480021744.01.T01 | MTR_1g088040 | 29.954 | 217 | 135 | 5 | 126 | 330 | 92 | 303 | 1.51e-20 | 90.9 |
MsG0480021744.01.T01 | MTR_6g024200 | 37.410 | 139 | 83 | 3 | 198 | 333 | 142 | 279 | 1.55e-20 | 90.1 |
MsG0480021744.01.T01 | MTR_8g042910 | 27.064 | 218 | 140 | 5 | 126 | 330 | 390 | 601 | 3.41e-19 | 89.0 |
MsG0480021744.01.T01 | MTR_7g107180 | 24.916 | 297 | 178 | 9 | 72 | 330 | 7 | 296 | 3.52e-19 | 87.0 |
MsG0480021744.01.T01 | MTR_8g104580 | 27.755 | 245 | 157 | 7 | 72 | 303 | 222 | 459 | 3.93e-19 | 88.6 |
MsG0480021744.01.T01 | MTR_7g102580 | 34.286 | 140 | 71 | 3 | 59 | 198 | 35 | 153 | 6.72e-18 | 79.7 |
MsG0480021744.01.T01 | MTR_7g110430 | 24.510 | 306 | 144 | 9 | 74 | 335 | 261 | 523 | 1.85e-16 | 80.5 |
MsG0480021744.01.T01 | MTR_0408s0030 | 32.143 | 112 | 75 | 1 | 214 | 325 | 32 | 142 | 7.79e-14 | 68.6 |
MsG0480021744.01.T01 | MTR_4g130790 | 37.736 | 106 | 62 | 3 | 127 | 228 | 110 | 215 | 4.61e-13 | 68.6 |
MsG0480021744.01.T01 | MTR_6g006340 | 41.333 | 75 | 27 | 1 | 127 | 201 | 43 | 100 | 6.07e-12 | 62.4 |
MsG0480021744.01.T01 | MTR_5g083590 | 25.792 | 221 | 133 | 8 | 72 | 268 | 7 | 220 | 6.52e-12 | 65.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0480021744.01.T01 | AT5G61680 | 50.418 | 359 | 145 | 2 | 8 | 334 | 5 | 362 | 2.70e-124 | 361 |
MsG0480021744.01.T01 | AT1G69940 | 49.444 | 360 | 145 | 5 | 11 | 336 | 5 | 361 | 6.22e-123 | 358 |
MsG0480021744.01.T01 | AT5G07410 | 49.444 | 360 | 145 | 5 | 11 | 336 | 5 | 361 | 2.96e-122 | 356 |
MsG0480021744.01.T01 | AT5G07430 | 47.753 | 356 | 150 | 5 | 12 | 335 | 9 | 360 | 3.20e-115 | 338 |
MsG0480021744.01.T01 | AT5G07420 | 45.810 | 358 | 159 | 4 | 10 | 334 | 4 | 359 | 1.40e-110 | 326 |
MsG0480021744.01.T01 | AT5G19730 | 36.395 | 294 | 146 | 3 | 76 | 330 | 90 | 381 | 1.06e-62 | 204 |
MsG0480021744.01.T01 | AT2G36710 | 35.690 | 297 | 153 | 3 | 71 | 330 | 90 | 385 | 4.68e-61 | 201 |
MsG0480021744.01.T01 | AT2G21610 | 38.144 | 291 | 153 | 5 | 69 | 334 | 48 | 336 | 1.78e-56 | 187 |
MsG0480021744.01.T01 | AT2G21610 | 38.144 | 291 | 153 | 5 | 69 | 334 | 53 | 341 | 2.57e-56 | 187 |
MsG0480021744.01.T01 | AT1G05310 | 34.680 | 297 | 153 | 3 | 74 | 330 | 93 | 388 | 1.09e-55 | 186 |
MsG0480021744.01.T01 | AT2G36700 | 33.333 | 294 | 161 | 3 | 71 | 330 | 41 | 333 | 1.03e-52 | 177 |
MsG0480021744.01.T01 | AT5G47500 | 33.987 | 306 | 160 | 4 | 67 | 332 | 56 | 359 | 3.46e-52 | 176 |
MsG0480021744.01.T01 | AT3G29090 | 30.032 | 313 | 163 | 5 | 67 | 331 | 2 | 306 | 2.26e-49 | 168 |
MsG0480021744.01.T01 | AT5G55590 | 33.113 | 302 | 158 | 4 | 70 | 330 | 80 | 378 | 3.21e-46 | 161 |
MsG0480021744.01.T01 | AT3G17060 | 30.547 | 311 | 181 | 4 | 54 | 330 | 27 | 336 | 9.12e-46 | 159 |
MsG0480021744.01.T01 | AT5G18990 | 33.654 | 312 | 167 | 7 | 60 | 334 | 19 | 327 | 1.38e-40 | 145 |
MsG0480021744.01.T01 | AT3G24130 | 33.444 | 302 | 161 | 7 | 72 | 334 | 34 | 334 | 6.53e-39 | 141 |
MsG0480021744.01.T01 | AT5G49180 | 30.994 | 342 | 172 | 12 | 42 | 336 | 240 | 564 | 2.44e-38 | 144 |
MsG0480021744.01.T01 | AT5G55590 | 32.411 | 253 | 127 | 4 | 70 | 281 | 80 | 329 | 9.77e-38 | 137 |
MsG0480021744.01.T01 | AT3G05610 | 29.412 | 306 | 162 | 6 | 72 | 330 | 256 | 554 | 4.39e-36 | 138 |
MsG0480021744.01.T01 | AT3G06830 | 29.836 | 305 | 159 | 6 | 74 | 330 | 260 | 557 | 5.95e-36 | 137 |
MsG0480021744.01.T01 | AT5G27870 | 29.412 | 306 | 162 | 6 | 72 | 330 | 253 | 551 | 8.52e-36 | 137 |
MsG0480021744.01.T01 | AT5G26810 | 29.936 | 314 | 174 | 8 | 67 | 335 | 26 | 338 | 3.47e-35 | 131 |
MsG0480021744.01.T01 | AT2G47280 | 32.899 | 307 | 166 | 7 | 65 | 334 | 28 | 331 | 9.41e-35 | 130 |
MsG0480021744.01.T01 | AT3G05620 | 29.553 | 291 | 162 | 7 | 77 | 330 | 246 | 530 | 7.51e-33 | 128 |
MsG0480021744.01.T01 | AT1G11580 | 29.664 | 327 | 172 | 10 | 55 | 332 | 231 | 548 | 9.38e-32 | 125 |
MsG0480021744.01.T01 | AT1G11580 | 29.664 | 327 | 172 | 10 | 55 | 332 | 252 | 569 | 1.01e-31 | 125 |
MsG0480021744.01.T01 | AT2G19150 | 31.333 | 300 | 171 | 5 | 69 | 334 | 38 | 336 | 2.63e-31 | 120 |
MsG0480021744.01.T01 | AT5G04960 | 29.801 | 302 | 174 | 7 | 72 | 336 | 258 | 558 | 5.07e-31 | 123 |
MsG0480021744.01.T01 | AT3G49220 | 32.026 | 306 | 156 | 9 | 72 | 330 | 285 | 585 | 6.46e-31 | 123 |
MsG0480021744.01.T01 | AT3G49220 | 32.248 | 307 | 154 | 10 | 72 | 330 | 330 | 630 | 7.43e-31 | 123 |
MsG0480021744.01.T01 | AT4G02300 | 27.815 | 302 | 173 | 6 | 72 | 330 | 222 | 521 | 8.50e-31 | 122 |
MsG0480021744.01.T01 | AT3G60730 | 28.013 | 307 | 165 | 7 | 74 | 330 | 208 | 508 | 2.99e-30 | 120 |
MsG0480021744.01.T01 | AT5G53370 | 30.233 | 301 | 168 | 8 | 72 | 330 | 274 | 574 | 5.00e-30 | 120 |
MsG0480021744.01.T01 | AT5G53370 | 30.233 | 301 | 168 | 8 | 72 | 330 | 310 | 610 | 5.21e-30 | 120 |
MsG0480021744.01.T01 | AT3G43270 | 28.803 | 309 | 157 | 9 | 74 | 330 | 217 | 514 | 1.63e-29 | 118 |
MsG0480021744.01.T01 | AT5G64640 | 28.025 | 314 | 165 | 8 | 72 | 329 | 289 | 597 | 1.92e-29 | 119 |
MsG0480021744.01.T01 | AT5G09760 | 28.296 | 311 | 165 | 7 | 72 | 329 | 241 | 546 | 2.07e-29 | 118 |
MsG0480021744.01.T01 | AT5G09760 | 28.296 | 311 | 165 | 7 | 72 | 329 | 267 | 572 | 2.56e-29 | 118 |
MsG0480021744.01.T01 | AT3G59010 | 28.571 | 294 | 166 | 9 | 74 | 330 | 231 | 517 | 4.05e-29 | 117 |
MsG0480021744.01.T01 | AT1G53840 | 25.936 | 374 | 217 | 11 | 2 | 330 | 218 | 576 | 4.50e-29 | 117 |
MsG0480021744.01.T01 | AT2G45220 | 27.647 | 340 | 185 | 11 | 34 | 330 | 180 | 501 | 1.11e-28 | 116 |
MsG0480021744.01.T01 | AT4G02320 | 28.197 | 305 | 164 | 7 | 74 | 330 | 210 | 507 | 1.47e-28 | 115 |
MsG0480021744.01.T01 | AT3G10710 | 29.412 | 306 | 169 | 7 | 72 | 336 | 256 | 555 | 1.62e-28 | 116 |
MsG0480021744.01.T01 | AT3G14300 | 27.139 | 339 | 199 | 9 | 1 | 303 | 601 | 927 | 2.29e-28 | 116 |
MsG0480021744.01.T01 | AT2G26450 | 27.138 | 269 | 157 | 5 | 74 | 303 | 304 | 572 | 4.68e-28 | 115 |
MsG0480021744.01.T01 | AT4G33220 | 27.273 | 319 | 179 | 8 | 59 | 330 | 79 | 391 | 4.99e-28 | 113 |
MsG0480021744.01.T01 | AT4G15980 | 28.514 | 249 | 125 | 5 | 72 | 274 | 392 | 633 | 5.21e-28 | 115 |
MsG0480021744.01.T01 | AT4G15980 | 28.514 | 249 | 125 | 5 | 72 | 274 | 402 | 643 | 5.75e-28 | 115 |
MsG0480021744.01.T01 | AT4G33220 | 27.273 | 319 | 179 | 8 | 59 | 330 | 200 | 512 | 1.18e-27 | 113 |
MsG0480021744.01.T01 | AT1G23200 | 28.367 | 349 | 180 | 13 | 25 | 330 | 222 | 543 | 1.27e-27 | 113 |
MsG0480021744.01.T01 | AT4G02330 | 29.431 | 299 | 160 | 7 | 51 | 303 | 238 | 531 | 1.45e-27 | 113 |
MsG0480021744.01.T01 | AT2G19150 | 32.780 | 241 | 127 | 5 | 69 | 275 | 38 | 277 | 4.10e-27 | 108 |
MsG0480021744.01.T01 | AT5G20860 | 30.108 | 279 | 165 | 8 | 50 | 305 | 201 | 472 | 5.81e-27 | 111 |
MsG0480021744.01.T01 | AT5G20860 | 27.976 | 336 | 178 | 11 | 50 | 330 | 201 | 527 | 1.49e-26 | 110 |
MsG0480021744.01.T01 | AT1G11370 | 28.364 | 275 | 145 | 7 | 43 | 274 | 21 | 286 | 1.50e-26 | 107 |
MsG0480021744.01.T01 | AT4G03930 | 27.331 | 311 | 181 | 8 | 63 | 330 | 205 | 513 | 3.79e-26 | 108 |
MsG0480021744.01.T01 | AT4G00190 | 28.923 | 325 | 171 | 13 | 62 | 336 | 154 | 468 | 6.44e-26 | 108 |
MsG0480021744.01.T01 | AT3G14310 | 27.063 | 303 | 170 | 6 | 74 | 330 | 284 | 581 | 1.40e-25 | 107 |
MsG0480021744.01.T01 | AT3G10720 | 30.876 | 217 | 133 | 6 | 126 | 330 | 37 | 248 | 2.67e-25 | 102 |
MsG0480021744.01.T01 | AT4G33230 | 26.756 | 299 | 175 | 8 | 74 | 330 | 299 | 595 | 2.83e-25 | 107 |
MsG0480021744.01.T01 | AT1G53830 | 26.733 | 303 | 171 | 6 | 74 | 330 | 279 | 576 | 3.01e-25 | 106 |
MsG0480021744.01.T01 | AT3G62170 | 25.962 | 312 | 163 | 6 | 74 | 330 | 279 | 577 | 3.20e-25 | 106 |
MsG0480021744.01.T01 | AT1G02810 | 26.774 | 310 | 174 | 8 | 69 | 330 | 262 | 566 | 6.23e-25 | 105 |
MsG0480021744.01.T01 | AT2G47030 | 25.574 | 305 | 173 | 5 | 74 | 330 | 279 | 577 | 7.64e-25 | 105 |
MsG0480021744.01.T01 | AT2G43050 | 27.052 | 329 | 187 | 11 | 43 | 330 | 189 | 505 | 1.21e-24 | 104 |
MsG0480021744.01.T01 | AT2G47040 | 26.316 | 304 | 172 | 6 | 74 | 330 | 286 | 584 | 1.70e-24 | 104 |
MsG0480021744.01.T01 | AT1G11590 | 26.837 | 313 | 180 | 8 | 63 | 330 | 205 | 513 | 2.06e-24 | 103 |
MsG0480021744.01.T01 | AT3G27980 | 26.490 | 302 | 175 | 7 | 72 | 330 | 189 | 486 | 2.64e-24 | 103 |
MsG0480021744.01.T01 | AT3G10720 | 30.876 | 217 | 133 | 6 | 126 | 330 | 393 | 604 | 3.79e-24 | 103 |
MsG0480021744.01.T01 | AT2G26440 | 27.305 | 282 | 153 | 7 | 69 | 305 | 235 | 509 | 3.80e-24 | 103 |
MsG0480021744.01.T01 | AT2G47550 | 26.688 | 311 | 173 | 10 | 69 | 330 | 243 | 547 | 8.14e-24 | 102 |
MsG0480021744.01.T01 | AT5G51490 | 29.085 | 306 | 164 | 10 | 74 | 330 | 224 | 525 | 8.44e-24 | 102 |
MsG0480021744.01.T01 | AT5G51500 | 27.653 | 311 | 162 | 12 | 74 | 330 | 228 | 529 | 1.60e-21 | 95.9 |
MsG0480021744.01.T01 | AT5G04970 | 29.032 | 217 | 137 | 5 | 126 | 330 | 398 | 609 | 1.67e-21 | 95.9 |
MsG0480021744.01.T01 | AT3G47400 | 25.737 | 373 | 209 | 14 | 11 | 330 | 226 | 583 | 2.15e-21 | 95.5 |
Find 69 sgRNAs with CRISPR-Local
Find 98 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GCAGTTGCATTGAGAATTTC+TGG | 0.162441 | 4:+63783308 | MsG0480021744.01.T01:CDS |
GGAATTTACTTGTCAAATTC+AGG | 0.182966 | 4:-63783866 | None:intergenic |
AGACACATTAATTAGACTTT+TGG | 0.265684 | 4:-63784176 | None:intergenic |
TCCGACACTTGCACGTCCTT+TGG | 0.278720 | 4:-63784075 | None:intergenic |
GAATGATTCAAGGATCTAAA+TGG | 0.313456 | 4:+63784141 | MsG0480021744.01.T01:CDS |
CCGACACTTGCACGTCCTTT+GGG | 0.314398 | 4:-63784074 | None:intergenic |
CATAGTAGCAGCATTATTTA+CGG | 0.336183 | 4:+63782693 | MsG0480021744.01.T01:CDS |
TTTGTGCATTGTGATGTTAC+TGG | 0.342796 | 4:+63783728 | MsG0480021744.01.T01:CDS |
CATGGTGTTATCCCACCCTT+TGG | 0.352671 | 4:-63783840 | None:intergenic |
GCGCTCTTTCCATCTGGTCT+TGG | 0.370674 | 4:-63783275 | None:intergenic |
CCACCTGCGCTCTTTCCATC+TGG | 0.379301 | 4:-63783281 | None:intergenic |
CGTCCTTTGGGATCTGACTT+TGG | 0.391498 | 4:-63784062 | None:intergenic |
CATTGTGATGTTACTGGAAC+TGG | 0.395140 | 4:+63783734 | MsG0480021744.01.T01:CDS |
TTTAAAGATTGCTTAATTCA+AGG | 0.397068 | 4:+63783407 | MsG0480021744.01.T01:CDS |
AGCTGCTAACATCCTCATAT+CGG | 0.423152 | 4:+63783126 | MsG0480021744.01.T01:CDS |
TTGAGAGCGCTTGGTGACGC+TGG | 0.432263 | 4:+63783647 | MsG0480021744.01.T01:CDS |
ATCCACAGAACTTCATACTT+TGG | 0.437722 | 4:+63784020 | MsG0480021744.01.T01:intron |
ATTACGCTTGGAATGATTCA+AGG | 0.450777 | 4:+63784131 | MsG0480021744.01.T01:CDS |
GTTAAACCTTTCATTACGCT+TGG | 0.452426 | 4:+63784119 | MsG0480021744.01.T01:CDS |
AATTACACGAATGGTGTTCC+CGG | 0.454307 | 4:-63782932 | None:intergenic |
GAATTTACTTGTCAAATTCA+GGG | 0.456824 | 4:-63783865 | None:intergenic |
GCCTCGGCAGTCACTAATGC+AGG | 0.457535 | 4:-63782829 | None:intergenic |
TCATGGTTTAATACCAATGT+TGG | 0.470537 | 4:+63782775 | MsG0480021744.01.T01:CDS |
GCATTAGTGACTGCCGAGGC+TGG | 0.484498 | 4:+63782832 | MsG0480021744.01.T01:CDS |
CACACCACTCACTAAAATGC+GGG | 0.489670 | 4:-63784219 | None:intergenic |
CGTGTAATTGTGAGCATTGG+TGG | 0.495639 | 4:+63782946 | MsG0480021744.01.T01:CDS |
CTTGTCAAATTCAGGGTGCA+TGG | 0.499942 | 4:-63783858 | None:intergenic |
AAAGTATACAAACCGATATG+AGG | 0.505435 | 4:-63783138 | None:intergenic |
AAAAGTGAATTGAGAGCGCT+TGG | 0.512329 | 4:+63783638 | MsG0480021744.01.T01:CDS |
GCCTGTGCTACTATCACTGT+TGG | 0.513667 | 4:-63783671 | None:intergenic |
CAGTCACTAATGCAGGGTCA+AGG | 0.520473 | 4:-63782822 | None:intergenic |
GCAGCATTATTTACGGTCAA+AGG | 0.523213 | 4:+63782700 | MsG0480021744.01.T01:CDS |
TGAGAGCGCTTGGTGACGCT+GGG | 0.524503 | 4:+63783648 | MsG0480021744.01.T01:CDS |
TCACTAAAATGCGGGGTGCA+CGG | 0.534895 | 4:-63784211 | None:intergenic |
ATGGTGTTATCCCACCCTTT+GGG | 0.537594 | 4:-63783839 | None:intergenic |
AAAGTAATGCAAGATGGTAG+TGG | 0.544469 | 4:+63782868 | MsG0480021744.01.T01:CDS |
CTACTTTCTTAGCTAGAGCA+TGG | 0.552896 | 4:+63783762 | MsG0480021744.01.T01:CDS |
ATCATTCCAAGCGTAATGAA+AGG | 0.554490 | 4:-63784125 | None:intergenic |
CCCAAAGGACGTGCAAGTGT+CGG | 0.560369 | 4:+63784074 | MsG0480021744.01.T01:CDS |
GCTATTAATCGCATCAGTGA+TGG | 0.560809 | 4:-63782902 | None:intergenic |
GTTATTAAAGTAATGCAAGA+TGG | 0.561198 | 4:+63782862 | MsG0480021744.01.T01:CDS |
AGTAATGTTGTTCATCCCAA+AGG | 0.563704 | 4:+63783824 | MsG0480021744.01.T01:CDS |
GCGATTAATAGCATACCTAC+CGG | 0.564109 | 4:+63782913 | MsG0480021744.01.T01:CDS |
TTGTTCTAATGGACCAACAT+TGG | 0.565358 | 4:-63782788 | None:intergenic |
AATAACTTTAGCACCAGCCT+CGG | 0.571464 | 4:-63782845 | None:intergenic |
ACGAGAAAATCAAAATTGAA+AGG | 0.577139 | 4:+63782980 | MsG0480021744.01.T01:CDS |
GCCAACAGTGATAGTAGCAC+AGG | 0.583672 | 4:+63783670 | MsG0480021744.01.T01:CDS |
TGTCATCACAAATTGTGTCC+TGG | 0.585713 | 4:-63783370 | None:intergenic |
GTAATGTTGTTCATCCCAAA+GGG | 0.586951 | 4:+63783825 | MsG0480021744.01.T01:CDS |
AATTCTGCACCAAGACCAGA+TGG | 0.588569 | 4:+63783266 | MsG0480021744.01.T01:CDS |
CCAGATGGAAAGAGCGCAGG+TGG | 0.592179 | 4:+63783281 | MsG0480021744.01.T01:CDS |
AGACCAGATGGAAAGAGCGC+AGG | 0.592262 | 4:+63783278 | MsG0480021744.01.T01:CDS |
AGTCACTAATGCAGGGTCAA+GGG | 0.594866 | 4:-63782821 | None:intergenic |
GATAGCAATATTAATAGCAT+AGG | 0.598765 | 4:-63782671 | None:intergenic |
ATTCGTGTAATTGTGAGCAT+TGG | 0.609756 | 4:+63782943 | MsG0480021744.01.T01:CDS |
AATGCTCACAATTACACGAA+TGG | 0.611168 | 4:-63782941 | None:intergenic |
GTAATTGTGAGCATTGGTGG+TGG | 0.617798 | 4:+63782949 | MsG0480021744.01.T01:CDS |
ATGTTGTTCATCCCAAAGGG+TGG | 0.619020 | 4:+63783828 | MsG0480021744.01.T01:CDS |
TGTTGTTCATCCCAAAGGGT+GGG | 0.630098 | 4:+63783829 | MsG0480021744.01.T01:CDS |
AAAGCAACTAAGTGAAGCAG+AGG | 0.643865 | 4:+63784097 | MsG0480021744.01.T01:CDS |
ACACGAATGGTGTTCCCGGT+AGG | 0.643878 | 4:-63782928 | None:intergenic |
CGATTAATAGCATACCTACC+GGG | 0.648332 | 4:+63782914 | MsG0480021744.01.T01:CDS |
TTTGGAGAATATAAGAACAC+AGG | 0.652388 | 4:+63784038 | MsG0480021744.01.T01:CDS |
TCACACCACTCACTAAAATG+CGG | 0.667514 | 4:-63784220 | None:intergenic |
CCTCGGCAGTCACTAATGCA+GGG | 0.680652 | 4:-63782828 | None:intergenic |
TTGCTTAATTCAAGGCACTG+TGG | 0.685953 | 4:+63783415 | MsG0480021744.01.T01:CDS |
CCCTGCATTAGTGACTGCCG+AGG | 0.696507 | 4:+63782828 | MsG0480021744.01.T01:CDS |
ACACCACTCACTAAAATGCG+GGG | 0.699087 | 4:-63784218 | None:intergenic |
GGACCAAAGTCAGATCCCAA+AGG | 0.709079 | 4:+63784059 | MsG0480021744.01.T01:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TAGTGTATATATATCATTTT+AGG | + | Chr4:63783964-63783983 | MsG0480021744.01.T01:intron | 15.0% |
!!! | TTTATAATTGCAAGTTTTTA+GGG | + | Chr4:63783345-63783364 | MsG0480021744.01.T01:CDS | 15.0% |
!!! | TTTTATAATTGCAAGTTTTT+AGG | + | Chr4:63783344-63783363 | MsG0480021744.01.T01:CDS | 15.0% |
!! | AAAAAACTCAATTAGATTCA+TGG | + | Chr4:63782758-63782777 | MsG0480021744.01.T01:CDS | 20.0% |
!! | AAATATGCCAAATTTAACAT+TGG | + | Chr4:63783037-63783056 | MsG0480021744.01.T01:intron | 20.0% |
!! | ATACACTAACATATTACTAA+TGG | - | Chr4:63783952-63783971 | None:intergenic | 20.0% |
!! | TTTAAAGATTGCTTAATTCA+AGG | + | Chr4:63783407-63783426 | MsG0480021744.01.T01:CDS | 20.0% |
!!! | AAAACTTTTGTTACATTGTA+TGG | + | Chr4:63783005-63783024 | MsG0480021744.01.T01:intron | 20.0% |
!!! | TAAATTTTGTATGAATTTGC+TGG | + | Chr4:63783238-63783257 | MsG0480021744.01.T01:intron | 20.0% |
! | ACGAGAAAATCAAAATTGAA+AGG | + | Chr4:63782980-63782999 | MsG0480021744.01.T01:CDS | 25.0% |
! | GAATTTACTTGTCAAATTCA+GGG | - | Chr4:63783868-63783887 | None:intergenic | 25.0% |
! | GATAGCAATATTAATAGCAT+AGG | - | Chr4:63782674-63782693 | None:intergenic | 25.0% |
! | GTTATTAAAGTAATGCAAGA+TGG | + | Chr4:63782862-63782881 | MsG0480021744.01.T01:CDS | 25.0% |
!! | AGACACATTAATTAGACTTT+TGG | - | Chr4:63784179-63784198 | None:intergenic | 25.0% |
!! | GAGTAAGCAAAGATAATTTT+AGG | - | Chr4:63783797-63783816 | None:intergenic | 25.0% |
!!! | GTACTTTTTCTTTGTTCTAA+TGG | - | Chr4:63782802-63782821 | None:intergenic | 25.0% |
AAAGTATACAAACCGATATG+AGG | - | Chr4:63783141-63783160 | None:intergenic | 30.0% | |
AGAACTGCAAAGTTGAATTA+AGG | - | Chr4:63783890-63783909 | None:intergenic | 30.0% | |
AGTTCCACCAATGTTAAATT+TGG | - | Chr4:63783047-63783066 | None:intergenic | 30.0% | |
CATAGTAGCAGCATTATTTA+CGG | + | Chr4:63782693-63782712 | MsG0480021744.01.T01:CDS | 30.0% | |
GAATGATTCAAGGATCTAAA+TGG | + | Chr4:63784141-63784160 | MsG0480021744.01.T01:CDS | 30.0% | |
GGAATTTACTTGTCAAATTC+AGG | - | Chr4:63783869-63783888 | None:intergenic | 30.0% | |
GTTAAATTTGGCATATTTGC+TGG | - | Chr4:63783035-63783054 | None:intergenic | 30.0% | |
TATGCCAAATTTAACATTGG+TGG | + | Chr4:63783040-63783059 | MsG0480021744.01.T01:intron | 30.0% | |
TCATGGTTTAATACCAATGT+TGG | + | Chr4:63782775-63782794 | MsG0480021744.01.T01:CDS | 30.0% | |
TTTGGAGAATATAAGAACAC+AGG | + | Chr4:63784038-63784057 | MsG0480021744.01.T01:CDS | 30.0% | |
! | CACATTAATTAGACTTTTGG+AGG | - | Chr4:63784176-63784195 | None:intergenic | 30.0% |
!! | ATTAATTAGACTTTTGGAGG+AGG | - | Chr4:63784173-63784192 | None:intergenic | 30.0% |
!! | TGGATTTCATTTTTGGAAGT+GGG | + | Chr4:63783435-63783454 | MsG0480021744.01.T01:CDS | 30.0% |
!!! | TCTAATTGAGTTTTTTCAGC+AGG | - | Chr4:63782754-63782773 | None:intergenic | 30.0% |
AAAGTAATGCAAGATGGTAG+TGG | + | Chr4:63782868-63782887 | MsG0480021744.01.T01:CDS | 35.0% | |
AACTGCAAAACAATATGGCA+CGG | + | Chr4:63783063-63783082 | MsG0480021744.01.T01:intron | 35.0% | |
AATGCTCACAATTACACGAA+TGG | - | Chr4:63782944-63782963 | None:intergenic | 35.0% | |
AGTAATGTTGTTCATCCCAA+AGG | + | Chr4:63783824-63783843 | MsG0480021744.01.T01:CDS | 35.0% | |
ATCATTCCAAGCGTAATGAA+AGG | - | Chr4:63784128-63784147 | None:intergenic | 35.0% | |
ATCCACAGAACTTCATACTT+TGG | + | Chr4:63784020-63784039 | MsG0480021744.01.T01:intron | 35.0% | |
ATTACGCTTGGAATGATTCA+AGG | + | Chr4:63784131-63784150 | MsG0480021744.01.T01:CDS | 35.0% | |
ATTCGTGTAATTGTGAGCAT+TGG | + | Chr4:63782943-63782962 | MsG0480021744.01.T01:CDS | 35.0% | |
CATTATTAGCCGCTATTATC+CGG | + | Chr4:63783540-63783559 | MsG0480021744.01.T01:intron | 35.0% | |
GCATTGCAATTCTTGAATTC+CGG | - | Chr4:63783562-63783581 | None:intergenic | 35.0% | |
GCTAATAATGCATGATTGCT+CGG | - | Chr4:63783530-63783549 | None:intergenic | 35.0% | |
GTAATGTTGTTCATCCCAAA+GGG | + | Chr4:63783825-63783844 | MsG0480021744.01.T01:CDS | 35.0% | |
GTTAAACCTTTCATTACGCT+TGG | + | Chr4:63784119-63784138 | MsG0480021744.01.T01:CDS | 35.0% | |
TCTTGAATTCCGGATAATAG+CGG | - | Chr4:63783552-63783571 | None:intergenic | 35.0% | |
TTTGTGCATTGTGATGTTAC+TGG | + | Chr4:63783728-63783747 | MsG0480021744.01.T01:CDS | 35.0% | |
! | TTGTTCTAATGGACCAACAT+TGG | - | Chr4:63782791-63782810 | None:intergenic | 35.0% |
!! | GTGGATTTCATTTTTGGAAG+TGG | + | Chr4:63783434-63783453 | MsG0480021744.01.T01:CDS | 35.0% |
!!! | TGAGTTTTTTCAGCAGGAAT+TGG | - | Chr4:63782748-63782767 | None:intergenic | 35.0% |
AAAGCAACTAAGTGAAGCAG+AGG | + | Chr4:63784097-63784116 | MsG0480021744.01.T01:CDS | 40.0% | |
AATAACTTTAGCACCAGCCT+CGG | - | Chr4:63782848-63782867 | None:intergenic | 40.0% | |
AATTACACGAATGGTGTTCC+CGG | - | Chr4:63782935-63782954 | None:intergenic | 40.0% | |
AGCTGCTAACATCCTCATAT+CGG | + | Chr4:63783126-63783145 | MsG0480021744.01.T01:CDS | 40.0% | |
CATTGTGATGTTACTGGAAC+TGG | + | Chr4:63783734-63783753 | MsG0480021744.01.T01:CDS | 40.0% | |
CGATTAATAGCATACCTACC+GGG | + | Chr4:63782914-63782933 | MsG0480021744.01.T01:CDS | 40.0% | |
CTACTTTCTTAGCTAGAGCA+TGG | + | Chr4:63783762-63783781 | MsG0480021744.01.T01:CDS | 40.0% | |
CTCCAAAGTATGAAGTTCTG+TGG | - | Chr4:63784025-63784044 | None:intergenic | 40.0% | |
GCAGCATTATTTACGGTCAA+AGG | + | Chr4:63782700-63782719 | MsG0480021744.01.T01:CDS | 40.0% | |
GCAGTTGCATTGAGAATTTC+TGG | + | Chr4:63783308-63783327 | MsG0480021744.01.T01:CDS | 40.0% | |
GCGATTAATAGCATACCTAC+CGG | + | Chr4:63782913-63782932 | MsG0480021744.01.T01:CDS | 40.0% | |
GCTATTAATCGCATCAGTGA+TGG | - | Chr4:63782905-63782924 | None:intergenic | 40.0% | |
GGTGGAACTGCAAAACAATA+TGG | + | Chr4:63783058-63783077 | MsG0480021744.01.T01:intron | 40.0% | |
TGTCATCACAAATTGTGTCC+TGG | - | Chr4:63783373-63783392 | None:intergenic | 40.0% | |
! | GGCACTGTGGATTTCATTTT+TGG | + | Chr4:63783428-63783447 | MsG0480021744.01.T01:CDS | 40.0% |
!! | AAAAGTGAATTGAGAGCGCT+TGG | + | Chr4:63783638-63783657 | MsG0480021744.01.T01:CDS | 40.0% |
!! | ATTAGACTTTTGGAGGAGGA+AGG | - | Chr4:63784169-63784188 | None:intergenic | 40.0% |
!! | TTGCTTAATTCAAGGCACTG+TGG | + | Chr4:63783415-63783434 | MsG0480021744.01.T01:CDS | 40.0% |
!!! | TTGCAAGTTTTTAGGGTTCC+AGG | + | Chr4:63783352-63783371 | MsG0480021744.01.T01:CDS | 40.0% |
AATTCTGCACCAAGACCAGA+TGG | + | Chr4:63783266-63783285 | MsG0480021744.01.T01:CDS | 45.0% | |
ACACCACTCACTAAAATGCG+GGG | - | Chr4:63784221-63784240 | None:intergenic | 45.0% | |
AGTCACTAATGCAGGGTCAA+GGG | - | Chr4:63782824-63782843 | None:intergenic | 45.0% | |
ATGTTGTTCATCCCAAAGGG+TGG | + | Chr4:63783828-63783847 | MsG0480021744.01.T01:CDS | 45.0% | |
CTTGTCAAATTCAGGGTGCA+TGG | - | Chr4:63783861-63783880 | None:intergenic | 45.0% | |
TGTTGTTCATCCCAAAGGGT+GGG | + | Chr4:63783829-63783848 | MsG0480021744.01.T01:CDS | 45.0% | |
!! | ATGGTGTTATCCCACCCTTT+GGG | - | Chr4:63783842-63783861 | None:intergenic | 45.0% |
!! | CGTGTAATTGTGAGCATTGG+TGG | + | Chr4:63782946-63782965 | MsG0480021744.01.T01:CDS | 45.0% |
!! | GTAATTGTGAGCATTGGTGG+TGG | + | Chr4:63782949-63782968 | MsG0480021744.01.T01:CDS | 45.0% |
CAGTCACTAATGCAGGGTCA+AGG | - | Chr4:63782825-63782844 | None:intergenic | 50.0% | |
GCCAACAGTGATAGTAGCAC+AGG | + | Chr4:63783670-63783689 | MsG0480021744.01.T01:CDS | 50.0% | |
GGACCAAAGTCAGATCCCAA+AGG | + | Chr4:63784059-63784078 | MsG0480021744.01.T01:CDS | 50.0% | |
TCACTAAAATGCGGGGTGCA+CGG | - | Chr4:63784214-63784233 | None:intergenic | 50.0% | |
! | GCCTGTGCTACTATCACTGT+TGG | - | Chr4:63783674-63783693 | None:intergenic | 50.0% |
!! | CATGGTGTTATCCCACCCTT+TGG | - | Chr4:63783843-63783862 | None:intergenic | 50.0% |
!! | CGTCCTTTGGGATCTGACTT+TGG | - | Chr4:63784065-63784084 | None:intergenic | 50.0% |
ACACGAATGGTGTTCCCGGT+AGG | - | Chr4:63782931-63782950 | None:intergenic | 55.0% | |
CCCAAAGGACGTGCAAGTGT+CGG | + | Chr4:63784074-63784093 | MsG0480021744.01.T01:CDS | 55.0% | |
CCGACACTTGCACGTCCTTT+GGG | - | Chr4:63784077-63784096 | None:intergenic | 55.0% | |
CCTCGGCAGTCACTAATGCA+GGG | - | Chr4:63782831-63782850 | None:intergenic | 55.0% | |
GCGCTCTTTCCATCTGGTCT+TGG | - | Chr4:63783278-63783297 | None:intergenic | 55.0% | |
TCCGACACTTGCACGTCCTT+TGG | - | Chr4:63784078-63784097 | None:intergenic | 55.0% | |
! | AGACCAGATGGAAAGAGCGC+AGG | + | Chr4:63783278-63783297 | MsG0480021744.01.T01:CDS | 55.0% |
!! | GCACCCCGCATTTTAGTGAG+TGG | + | Chr4:63784215-63784234 | MsG0480021744.01.T01:three_prime_UTR | 55.0% |
CCACCTGCGCTCTTTCCATC+TGG | - | Chr4:63783284-63783303 | None:intergenic | 60.0% | |
CCCTGCATTAGTGACTGCCG+AGG | + | Chr4:63782828-63782847 | MsG0480021744.01.T01:CDS | 60.0% | |
GCATTAGTGACTGCCGAGGC+TGG | + | Chr4:63782832-63782851 | MsG0480021744.01.T01:CDS | 60.0% | |
GCCTCGGCAGTCACTAATGC+AGG | - | Chr4:63782832-63782851 | None:intergenic | 60.0% | |
! | CCAGATGGAAAGAGCGCAGG+TGG | + | Chr4:63783281-63783300 | MsG0480021744.01.T01:CDS | 60.0% |
!! | TGAGAGCGCTTGGTGACGCT+GGG | + | Chr4:63783648-63783667 | MsG0480021744.01.T01:CDS | 60.0% |
!! | TTGAGAGCGCTTGGTGACGC+TGG | + | Chr4:63783647-63783666 | MsG0480021744.01.T01:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr4 | gene | 63782652 | 63784240 | 63782652 | ID=MsG0480021744.01;Name=MsG0480021744.01 |
Chr4 | mRNA | 63782652 | 63784240 | 63782652 | ID=MsG0480021744.01.T01;Parent=MsG0480021744.01;Name=MsG0480021744.01.T01;_AED=0.50;_eAED=0.50;_QI=0|0.5|0.6|1|1|1|5|53|336 |
Chr4 | exon | 63784028 | 63784240 | 63784028 | ID=MsG0480021744.01.T01:exon:8446;Parent=MsG0480021744.01.T01 |
Chr4 | exon | 63783638 | 63783879 | 63783638 | ID=MsG0480021744.01.T01:exon:8445;Parent=MsG0480021744.01.T01 |
Chr4 | exon | 63783266 | 63783472 | 63783266 | ID=MsG0480021744.01.T01:exon:8444;Parent=MsG0480021744.01.T01 |
Chr4 | exon | 63783116 | 63783147 | 63783116 | ID=MsG0480021744.01.T01:exon:8443;Parent=MsG0480021744.01.T01 |
Chr4 | exon | 63782652 | 63783021 | 63782652 | ID=MsG0480021744.01.T01:exon:8442;Parent=MsG0480021744.01.T01 |
Chr4 | CDS | 63782652 | 63783021 | 63782652 | ID=MsG0480021744.01.T01:cds;Parent=MsG0480021744.01.T01 |
Chr4 | CDS | 63783116 | 63783147 | 63783116 | ID=MsG0480021744.01.T01:cds;Parent=MsG0480021744.01.T01 |
Chr4 | CDS | 63783266 | 63783472 | 63783266 | ID=MsG0480021744.01.T01:cds;Parent=MsG0480021744.01.T01 |
Chr4 | CDS | 63783638 | 63783879 | 63783638 | ID=MsG0480021744.01.T01:cds;Parent=MsG0480021744.01.T01 |
Chr4 | CDS | 63784028 | 63784187 | 63784028 | ID=MsG0480021744.01.T01:cds;Parent=MsG0480021744.01.T01 |
Chr4 | three_prime_UTR | 63784188 | 63784240 | 63784188 | ID=MsG0480021744.01.T01:three_prime_utr;Parent=MsG0480021744.01.T01 |
Gene Sequence |
Protein sequence |