AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780036340.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780036340.01.T01 MTR_7g011530 87.464 351 9 1 1 351 1 316 0.0 629
MsG0780036340.01.T01 MTR_6g012800 73.789 351 57 1 1 351 1 316 0.0 540
MsG0780036340.01.T01 MTR_6g088810 43.077 325 136 6 14 331 90 372 9.81e-82 254
MsG0780036340.01.T01 MTR_8g102380 41.846 325 142 5 14 331 88 372 1.12e-80 251
MsG0780036340.01.T01 MTR_8g102380 42.049 283 117 5 14 289 88 330 1.08e-66 213
MsG0780036340.01.T01 MTR_5g012600 37.500 344 162 8 5 340 62 360 4.36e-65 210
MsG0780036340.01.T01 MTR_1g086540 36.970 330 160 6 8 331 52 339 4.48e-64 207
MsG0780036340.01.T01 MTR_7g102600 35.965 342 159 5 2 331 95 388 2.39e-61 202
MsG0780036340.01.T01 MTR_4g124740 36.283 339 151 9 5 333 53 336 6.13e-60 196
MsG0780036340.01.T01 MTR_7g092780 35.294 340 155 5 8 331 92 382 2.00e-58 194
MsG0780036340.01.T01 MTR_6g024165 33.333 345 176 8 4 341 39 336 3.66e-58 192
MsG0780036340.01.T01 MTR_2g073390 33.735 332 164 5 2 325 67 350 2.80e-57 190
MsG0780036340.01.T01 MTR_4g074290 33.535 331 164 5 3 325 68 350 1.28e-56 188
MsG0780036340.01.T01 MTR_8g023310 34.177 316 152 3 8 312 281 551 2.08e-56 193
MsG0780036340.01.T01 MTR_2g033970 33.528 343 163 6 8 339 58 346 2.94e-56 187
MsG0780036340.01.T01 MTR_5g095490 35.366 328 162 7 12 331 67 352 6.90e-56 186
MsG0780036340.01.T01 MTR_8g036225 33.430 344 171 8 5 341 32 324 1.23e-52 177
MsG0780036340.01.T01 MTR_5g093970 32.267 344 174 7 3 340 40 330 7.32e-52 175
MsG0780036340.01.T01 MTR_2g436600 32.353 340 162 9 8 339 57 336 3.53e-51 174
MsG0780036340.01.T01 MTR_0009s0350 32.432 333 165 8 3 325 68 350 4.42e-51 174
MsG0780036340.01.T01 MTR_0009s0340 32.432 333 165 8 3 325 68 350 4.42e-51 174
MsG0780036340.01.T01 MTR_4g124520 33.138 341 168 6 5 330 209 504 8.04e-51 177
MsG0780036340.01.T01 MTR_6g042660 30.488 328 170 5 12 333 43 318 3.45e-49 168
MsG0780036340.01.T01 MTR_4g035980 34.062 320 149 6 8 312 229 501 3.03e-48 171
MsG0780036340.01.T01 MTR_2g044810 32.440 336 169 5 8 330 227 517 4.26e-48 170
MsG0780036340.01.T01 MTR_4g025670 30.725 345 177 7 6 333 176 475 1.91e-47 167
MsG0780036340.01.T01 MTR_1g083520 31.672 341 170 6 8 330 216 511 5.51e-47 167
MsG0780036340.01.T01 MTR_2g436040 31.844 358 181 10 8 350 234 543 7.58e-47 168
MsG0780036340.01.T01 MTR_4g087980 30.769 338 175 4 8 331 208 500 9.72e-47 166
MsG0780036340.01.T01 MTR_5g088300 32.353 340 166 7 5 339 36 316 1.49e-46 161
MsG0780036340.01.T01 MTR_1g083510 30.362 359 184 8 8 351 274 581 5.92e-46 165
MsG0780036340.01.T01 MTR_3g033690 30.818 318 162 5 8 312 216 488 1.79e-45 163
MsG0780036340.01.T01 MTR_7g112580 32.258 310 157 4 8 312 243 504 2.49e-45 162
MsG0780036340.01.T01 MTR_5g088280 31.268 339 169 6 8 341 41 320 8.84e-45 156
MsG0780036340.01.T01 MTR_3g008700 30.503 318 163 5 8 312 217 489 9.90e-45 160
MsG0780036340.01.T01 MTR_7g108905 31.953 338 169 6 8 330 248 539 1.11e-44 161
MsG0780036340.01.T01 MTR_7g053360 30.503 318 163 5 8 312 217 489 1.12e-44 160
MsG0780036340.01.T01 MTR_5g088290 32.344 337 165 7 8 339 50 328 1.22e-44 156
MsG0780036340.01.T01 MTR_3g008720 30.189 318 164 5 8 312 217 489 2.57e-44 160
MsG0780036340.01.T01 MTR_3g008640 30.189 318 164 5 8 312 217 489 3.95e-44 159
MsG0780036340.01.T01 MTR_1g033050 30.723 332 166 6 14 333 26 305 5.23e-44 154
MsG0780036340.01.T01 MTR_3g010780 31.024 332 175 7 8 330 271 557 1.45e-43 158
MsG0780036340.01.T01 MTR_7g112590 30.362 359 183 8 8 350 273 580 2.01e-43 158
MsG0780036340.01.T01 MTR_1g054880 30.245 367 189 9 1 351 241 556 2.17e-43 157
MsG0780036340.01.T01 MTR_7g108890 30.595 353 181 9 5 341 249 553 2.56e-43 157
MsG0780036340.01.T01 MTR_2g044880 29.586 338 179 5 8 331 217 509 2.45e-42 154
MsG0780036340.01.T01 MTR_1g088020 30.447 358 182 9 10 351 247 553 2.81e-42 154
MsG0780036340.01.T01 MTR_8g104645 28.412 359 191 7 8 351 63 370 6.79e-42 150
MsG0780036340.01.T01 MTR_8g042900 30.330 333 178 7 8 331 278 565 8.04e-42 154
MsG0780036340.01.T01 MTR_2g436050 29.248 359 189 8 8 350 252 561 8.28e-42 153
MsG0780036340.01.T01 MTR_8g104655 30.599 317 163 4 8 312 232 503 9.42e-42 153
MsG0780036340.01.T01 MTR_4g025690 30.532 357 182 8 8 351 208 511 1.63e-41 152
MsG0780036340.01.T01 MTR_2g044810 37.946 224 126 4 120 330 225 448 1.87e-41 151
MsG0780036340.01.T01 MTR_2g044660 29.254 335 182 6 7 331 328 617 1.91e-41 153
MsG0780036340.01.T01 MTR_4g087970 30.267 337 176 4 8 330 209 500 1.92e-41 152
MsG0780036340.01.T01 MTR_7g108875 31.579 323 160 8 5 312 251 527 3.14e-41 152
MsG0780036340.01.T01 MTR_3g010770 31.562 320 158 6 8 312 265 538 3.38e-41 152
MsG0780036340.01.T01 MTR_8g023150 31.014 345 176 10 8 339 276 571 7.22e-41 151
MsG0780036340.01.T01 MTR_4g025730 32.024 331 165 8 8 329 207 486 1.26e-40 149
MsG0780036340.01.T01 MTR_7g108900 29.396 364 185 10 5 349 246 556 1.94e-40 150
MsG0780036340.01.T01 MTR_5g083620 28.852 357 189 8 8 350 48 353 2.73e-40 145
MsG0780036340.01.T01 MTR_6g042690 42.778 180 99 2 155 333 149 325 2.87e-40 145
MsG0780036340.01.T01 MTR_8g042910 31.034 319 161 4 8 312 302 575 5.70e-40 149
MsG0780036340.01.T01 MTR_7g110560 30.086 349 183 9 4 339 238 538 9.24e-40 147
MsG0780036340.01.T01 MTR_1g086210 29.912 341 180 7 8 334 255 550 1.16e-39 147
MsG0780036340.01.T01 MTR_3g091380 29.586 338 178 7 8 330 288 580 1.29e-39 148
MsG0780036340.01.T01 MTR_4g120280 31.111 315 162 6 8 312 260 529 1.31e-39 147
MsG0780036340.01.T01 MTR_7g050950 28.931 318 168 5 8 312 244 516 1.37e-39 147
MsG0780036340.01.T01 MTR_1g088225 29.888 358 182 10 10 351 247 551 1.56e-39 147
MsG0780036340.01.T01 MTR_8g093460 29.882 338 172 5 14 330 241 534 1.72e-39 147
MsG0780036340.01.T01 MTR_3g095920 28.571 350 182 6 4 330 243 547 2.31e-39 147
MsG0780036340.01.T01 MTR_7g050980 28.302 318 170 4 8 312 245 517 4.06e-39 146
MsG0780036340.01.T01 MTR_4g051810 36.967 211 120 5 137 341 116 319 4.11e-39 141
MsG0780036340.01.T01 MTR_0458s0030 36.032 247 139 6 118 351 72 312 4.32e-39 141
MsG0780036340.01.T01 MTR_1g088040 36.032 247 139 6 118 351 72 312 4.32e-39 141
MsG0780036340.01.T01 MTR_1g083470 28.571 322 170 6 7 313 258 534 5.46e-39 146
MsG0780036340.01.T01 MTR_1g083500 28.571 322 170 6 7 313 258 534 5.46e-39 146
MsG0780036340.01.T01 MTR_8g088610 28.571 357 191 10 8 350 67 373 6.46e-39 142
MsG0780036340.01.T01 MTR_4g120290 30.476 315 164 6 8 312 260 529 3.43e-38 144
MsG0780036340.01.T01 MTR_4g005170 28.793 323 168 7 7 313 263 539 4.22e-38 144
MsG0780036340.01.T01 MTR_1g008140 29.661 354 186 8 1 339 291 596 6.95e-38 143
MsG0780036340.01.T01 MTR_7g107180 28.933 356 182 10 8 351 9 305 7.96e-38 137
MsG0780036340.01.T01 MTR_1g083490 28.923 325 165 8 7 313 263 539 1.38e-37 142
MsG0780036340.01.T01 MTR_7g050870 27.987 318 171 5 8 312 244 516 1.94e-37 141
MsG0780036340.01.T01 MTR_4g124550 29.358 327 173 6 8 322 287 567 3.41e-36 138
MsG0780036340.01.T01 MTR_4g005180 28.173 323 170 7 7 313 245 521 7.12e-36 137
MsG0780036340.01.T01 MTR_6g025590 33.493 209 98 2 4 210 47 216 9.99e-36 130
MsG0780036340.01.T01 MTR_1g086190 29.874 318 167 7 8 314 257 529 1.91e-35 136
MsG0780036340.01.T01 MTR_0618s0020 34.199 231 132 5 135 351 2 226 2.58e-35 129
MsG0780036340.01.T01 MTR_2g105560 36.269 193 113 4 129 312 110 301 9.91e-35 130
MsG0780036340.01.T01 MTR_7g110440 27.095 358 197 7 8 349 261 570 5.91e-32 126
MsG0780036340.01.T01 MTR_7g110490 27.654 358 193 8 8 348 261 569 9.91e-32 125
MsG0780036340.01.T01 MTR_7g110510 27.654 358 193 8 8 348 261 569 9.91e-32 125
MsG0780036340.01.T01 MTR_7g110420 27.160 324 172 4 8 312 261 539 1.04e-30 122
MsG0780036340.01.T01 MTR_6g024200 44.355 124 63 3 210 330 150 270 5.54e-26 105
MsG0780036340.01.T01 MTR_7g111560 26.437 348 176 10 8 325 242 539 3.96e-25 106
MsG0780036340.01.T01 MTR_8g104580 25.962 312 151 7 8 312 224 462 1.14e-23 102
MsG0780036340.01.T01 MTR_7g110430 24.207 347 187 6 8 349 261 536 1.87e-23 101
MsG0780036340.01.T01 MTR_0408s0030 41.379 116 64 2 219 333 33 145 6.34e-21 88.2
MsG0780036340.01.T01 MTR_5g083590 24.926 337 147 10 7 330 8 251 7.15e-20 88.6
MsG0780036340.01.T01 MTR_7g102580 48.276 87 35 2 123 204 71 152 3.95e-17 77.8
MsG0780036340.01.T01 MTR_4g130790 37.037 108 56 3 139 234 110 217 1.24e-15 76.3
MsG0780036340.01.T01 MTR_7g102570 42.857 91 48 2 218 308 18 104 2.72e-15 72.0
MsG0780036340.01.T01 MTR_6g006340 54.167 48 22 0 164 211 56 103 2.85e-12 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780036340.01.T01 AT3G29090 72.674 344 59 1 8 351 9 317 0.0 515
MsG0780036340.01.T01 AT5G19730 42.727 330 140 5 9 331 89 376 5.03e-82 254
MsG0780036340.01.T01 AT2G21610 36.145 332 155 6 3 330 48 326 2.84e-66 213
MsG0780036340.01.T01 AT2G21610 36.145 332 155 6 3 330 53 331 2.93e-66 213
MsG0780036340.01.T01 AT5G47500 35.260 346 171 7 5 342 60 360 9.53e-66 212
MsG0780036340.01.T01 AT2G36700 35.465 344 162 5 5 339 41 333 1.56e-62 203
MsG0780036340.01.T01 AT2G36710 34.384 349 166 6 3 339 88 385 1.77e-61 202
MsG0780036340.01.T01 AT3G17060 34.694 343 159 7 8 339 48 336 1.95e-60 197
MsG0780036340.01.T01 AT1G05310 34.870 347 160 5 8 339 93 388 1.41e-58 194
MsG0780036340.01.T01 AT5G61680 33.626 342 169 5 5 339 68 358 3.65e-58 192
MsG0780036340.01.T01 AT5G07430 34.302 344 169 7 2 339 63 355 5.07e-58 192
MsG0780036340.01.T01 AT5G55590 36.228 334 163 5 5 330 81 372 2.37e-57 191
MsG0780036340.01.T01 AT1G69940 32.716 324 163 4 14 330 74 349 2.57e-57 190
MsG0780036340.01.T01 AT5G07420 33.133 332 168 4 5 330 66 349 5.83e-56 187
MsG0780036340.01.T01 AT5G07410 32.288 319 161 4 14 325 74 344 1.74e-54 183
MsG0780036340.01.T01 AT3G06830 31.844 358 179 9 8 351 260 566 1.16e-51 180
MsG0780036340.01.T01 AT5G55590 36.735 294 136 5 5 290 81 332 1.30e-51 174
MsG0780036340.01.T01 AT4G00190 32.022 356 178 9 8 350 167 471 2.75e-50 174
MsG0780036340.01.T01 AT5G49180 32.047 337 170 8 8 330 262 553 1.47e-48 172
MsG0780036340.01.T01 AT1G11580 31.953 338 169 8 8 330 249 540 2.95e-48 171
MsG0780036340.01.T01 AT5G26810 33.433 335 174 5 8 333 36 330 3.04e-48 166
MsG0780036340.01.T01 AT4G33230 32.456 342 170 9 7 333 298 593 3.71e-48 171
MsG0780036340.01.T01 AT1G11580 31.953 338 169 8 8 330 270 561 4.96e-48 171
MsG0780036340.01.T01 AT3G05610 30.899 356 182 8 8 350 258 562 7.24e-48 171
MsG0780036340.01.T01 AT3G05620 33.333 339 168 7 8 339 243 530 1.10e-47 169
MsG0780036340.01.T01 AT5G27870 30.141 355 184 7 8 349 255 558 1.45e-46 169
MsG0780036340.01.T01 AT1G23200 32.551 341 170 6 2 331 247 538 2.86e-46 166
MsG0780036340.01.T01 AT3G24130 30.816 331 179 6 8 331 36 323 5.01e-46 160
MsG0780036340.01.T01 AT1G53830 31.953 338 171 4 7 330 278 570 1.61e-45 164
MsG0780036340.01.T01 AT5G18990 29.909 331 182 5 8 331 31 318 1.61e-45 159
MsG0780036340.01.T01 AT1G11370 31.338 284 139 3 8 280 48 286 2.06e-45 157
MsG0780036340.01.T01 AT3G14310 31.546 317 161 3 7 312 283 554 2.19e-45 164
MsG0780036340.01.T01 AT2G26450 31.563 339 171 9 7 330 303 595 2.61e-45 164
MsG0780036340.01.T01 AT4G03930 30.056 356 186 9 8 351 218 522 5.64e-45 161
MsG0780036340.01.T01 AT3G43270 32.911 316 156 4 8 312 217 487 1.33e-44 160
MsG0780036340.01.T01 AT5G64640 31.624 351 171 7 7 333 290 595 5.62e-44 160
MsG0780036340.01.T01 AT4G02300 31.765 340 171 8 7 331 223 516 1.02e-43 158
MsG0780036340.01.T01 AT3G10710 31.250 336 171 7 8 331 258 545 1.48e-43 158
MsG0780036340.01.T01 AT3G27980 29.213 356 189 7 8 351 191 495 1.61e-43 157
MsG0780036340.01.T01 AT4G02320 30.252 357 184 7 8 350 210 515 1.74e-43 157
MsG0780036340.01.T01 AT5G04960 30.141 355 185 9 8 351 260 562 2.06e-43 158
MsG0780036340.01.T01 AT5G09760 29.971 347 179 4 7 333 242 544 2.48e-43 157
MsG0780036340.01.T01 AT4G15980 31.025 361 178 11 8 351 394 700 2.49e-43 159
MsG0780036340.01.T01 AT4G15980 31.025 361 178 11 8 351 404 710 2.59e-43 159
MsG0780036340.01.T01 AT5G09760 29.971 347 179 4 7 333 268 570 2.84e-43 157
MsG0780036340.01.T01 AT3G10720 35.484 248 143 5 108 341 6 250 2.97e-43 150
MsG0780036340.01.T01 AT1G11590 29.213 356 189 7 8 351 218 522 3.61e-43 157
MsG0780036340.01.T01 AT2G47040 30.960 323 168 5 4 314 282 561 5.51e-43 157
MsG0780036340.01.T01 AT2G47030 30.530 321 168 5 6 314 277 554 6.11e-43 157
MsG0780036340.01.T01 AT4G02330 29.480 346 183 5 1 330 254 554 1.33e-42 155
MsG0780036340.01.T01 AT2G47280 30.595 353 176 8 3 341 32 329 1.73e-42 150
MsG0780036340.01.T01 AT2G19150 30.398 352 177 8 3 341 38 334 1.82e-42 150
MsG0780036340.01.T01 AT3G10720 30.925 346 173 7 13 341 310 606 3.52e-42 155
MsG0780036340.01.T01 AT3G62170 29.721 323 172 5 4 314 275 554 3.83e-42 155
MsG0780036340.01.T01 AT2G45220 30.060 336 173 6 8 330 209 495 5.80e-42 153
MsG0780036340.01.T01 AT1G53840 30.838 334 176 8 7 330 282 570 8.55e-42 154
MsG0780036340.01.T01 AT2G26440 31.447 318 158 4 8 312 240 510 3.38e-41 152
MsG0780036340.01.T01 AT1G02810 30.435 322 165 4 5 312 264 540 9.80e-41 150
MsG0780036340.01.T01 AT2G47550 31.366 322 162 4 5 312 245 521 1.25e-40 150
MsG0780036340.01.T01 AT4G33220 29.882 338 178 5 7 330 93 385 1.32e-40 147
MsG0780036340.01.T01 AT3G59010 29.499 339 180 7 8 339 231 517 1.42e-40 149
MsG0780036340.01.T01 AT2G43050 29.730 333 177 6 8 331 216 500 3.39e-40 148
MsG0780036340.01.T01 AT3G60730 29.345 351 183 8 6 339 206 508 7.35e-40 147
MsG0780036340.01.T01 AT4G33220 29.882 338 178 5 7 330 214 506 8.11e-40 147
MsG0780036340.01.T01 AT3G49220 31.065 338 173 7 8 330 287 579 1.46e-39 148
MsG0780036340.01.T01 AT3G49220 31.065 338 173 7 8 330 332 624 2.04e-39 148
MsG0780036340.01.T01 AT5G04970 34.562 217 130 3 108 312 367 583 6.38e-39 146
MsG0780036340.01.T01 AT5G51490 31.790 324 153 6 8 312 224 498 1.77e-38 144
MsG0780036340.01.T01 AT5G20860 29.310 348 178 10 8 339 232 527 2.04e-38 144
MsG0780036340.01.T01 AT3G14300 28.775 351 191 8 7 345 662 965 9.94e-37 141
MsG0780036340.01.T01 AT3G47400 31.348 319 160 11 8 312 283 556 1.14e-36 139
MsG0780036340.01.T01 AT5G53370 30.747 348 178 8 7 339 275 574 1.38e-36 139
MsG0780036340.01.T01 AT5G53370 30.747 348 178 8 7 339 311 610 1.41e-36 139
MsG0780036340.01.T01 AT5G51500 30.312 320 163 5 8 312 228 502 7.17e-36 137
MsG0780036340.01.T01 AT2G19150 30.796 289 135 7 8 283 43 279 1.47e-33 125
MsG0780036340.01.T01 AT5G20860 32.195 205 125 4 122 312 269 473 1.68e-31 124
MsG0780036340.01.T01 AT1G44980 27.053 207 106 4 8 214 80 241 1.66e-14 72.8

Find 100 sgRNAs with CRISPR-Local

Find 347 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTACAATTTGAAGACCAATT+TGG 0.219082 7:+6670609 MsG0780036340.01.T01:CDS
GACAAGTTGGCTGGGATAAC+TGG 0.230659 7:+6673228 MsG0780036340.01.T01:CDS
GGAAGCGTTGATTTCATCTT+TGG 0.252811 7:+6672416 MsG0780036340.01.T01:CDS
CACCAATTTGCTCGATTTGA+TGG 0.259447 7:-6673835 None:intergenic
AGGAAATCTCATACAGAAAA+AGG 0.276238 7:-6674040 None:intergenic
GTAACTACATACAGGTGTTT+TGG 0.297278 7:+6673799 MsG0780036340.01.T01:intron
AAGAATTTCATCACTCTTGC+TGG 0.302602 7:+6669736 MsG0780036340.01.T01:CDS
TGGAAATAGCACCGCTCTAT+TGG 0.305014 7:+6672436 MsG0780036340.01.T01:CDS
TACAATTTGAAGACCAATTT+GGG 0.307490 7:+6670610 MsG0780036340.01.T01:CDS
GTGATGAAATTCTTCGTCTT+AGG 0.309044 7:-6669727 None:intergenic
TTATGTTAATTTGGGGTAAT+GGG 0.313684 7:+6669845 MsG0780036340.01.T01:CDS
GTTATGTTAATTTGGGGTAA+TGG 0.331353 7:+6669844 MsG0780036340.01.T01:CDS
TTCTCTTTCTGGCAGGGGTC+AGG 0.335007 7:+6671742 MsG0780036340.01.T01:intron
TTCTACAATTGTAGGTTCCT+TGG 0.339872 7:+6671805 MsG0780036340.01.T01:CDS
GATGTGCCTTCTACAATTGT+AGG 0.341539 7:+6671797 MsG0780036340.01.T01:CDS
GGACGACCATGGGGACCTTT+TGG 0.343712 7:+6673164 MsG0780036340.01.T01:CDS
AGCCAAGATCTATCTGGTTC+TGG 0.369784 7:-6673913 None:intergenic
ACATCGAGTAATACCCAAAT+TGG 0.380612 7:-6670623 None:intergenic
GAGCATTTCTACGCAGAATA+TGG 0.387250 7:-6673961 None:intergenic
ACTGTCATCCGTGTGTCTCC+TGG 0.387764 7:+6669679 MsG0780036340.01.T01:CDS
GTCCATCAAATCGAGCAAAT+TGG 0.388940 7:+6673833 MsG0780036340.01.T01:CDS
TGAGCAAGCCAAGATCTATC+TGG 0.389043 7:-6673919 None:intergenic
TTGCAGCCTGCTAGGGTGAT+TGG 0.389420 7:+6670777 MsG0780036340.01.T01:intron
CCTGCTAGGGTGATTGGAAC+TGG 0.391611 7:+6670783 MsG0780036340.01.T01:intron
CAAATTGGTCTTCAAATTGT+AGG 0.394684 7:-6670608 None:intergenic
GGACATTCATATGCATATCT+TGG 0.394910 7:+6673143 MsG0780036340.01.T01:CDS
TCACTACCACACAATATTGC+AGG 0.396776 7:-6674260 None:intergenic
ACCGTTTCACAGAACGGAAC+CGG 0.404772 7:+6669598 MsG0780036340.01.T01:CDS
ACCGGCTGCTTATAGATTCC+AGG 0.406968 7:-6669697 None:intergenic
GTGATTGGAACTGGGACGTT+TGG 0.414318 7:+6670792 MsG0780036340.01.T01:CDS
TTGAAAGATTGCTATATTGA+AGG 0.418388 7:+6672395 MsG0780036340.01.T01:CDS
CATTGCAGATGTGTTATAAC+AGG 0.425498 7:+6673113 MsG0780036340.01.T01:intron
TCCGGTTCCGTTCTGTGAAA+CGG 0.431791 7:-6669599 None:intergenic
CATATTCACTGCAAGTCTGC+AGG 0.433473 7:+6672467 MsG0780036340.01.T01:CDS
ATCTTGGCTTGCTCAAAGAA+TGG 0.443117 7:+6673927 MsG0780036340.01.T01:CDS
AAACAGATGAAAATACTATC+AGG 0.445478 7:-6674060 None:intergenic
TTGCTCAAAGAATGGGTTTG+AGG 0.447737 7:+6673935 MsG0780036340.01.T01:CDS
TGTCTTTGCATACACTTACA+TGG 0.454323 7:+6673193 MsG0780036340.01.T01:CDS
ATCCAGAACCAGATAGATCT+TGG 0.455442 7:+6673911 MsG0780036340.01.T01:CDS
TTGCACCGTTTGAAAATCTC+CGG 0.457171 7:-6669617 None:intergenic
AGCAAATTGGTGTAGAGAAC+TGG 0.458026 7:+6673846 MsG0780036340.01.T01:CDS
ACAAGTTGGCTGGGATAACT+GGG 0.459654 7:+6673229 MsG0780036340.01.T01:CDS
TCTTGGCTTGCTCAAAGAAT+GGG 0.463869 7:+6673928 MsG0780036340.01.T01:CDS
TTGTAGGTTCCTTGGATGGC+AGG 0.473136 7:+6671813 MsG0780036340.01.T01:CDS
GTGAGGATACTGTGCTTACT+TGG 0.476074 7:+6669767 MsG0780036340.01.T01:CDS
AAGGAACCTACAATTGTAGA+AGG 0.478928 7:-6671803 None:intergenic
GCGAGAGTTGCCAAGGGGTA+CGG 0.479591 7:-6669653 None:intergenic
AAATCATCGCAAGAAGCAAC+TGG 0.481841 7:+6672512 MsG0780036340.01.T01:CDS
TTTCTGGCAGGGGTCAGGAC+AGG 0.483965 7:+6671747 MsG0780036340.01.T01:intron
TGCATATCTTGGACGACCAT+GGG 0.485305 7:+6673154 MsG0780036340.01.T01:CDS
AGAATTTCATCACTCTTGCT+GGG 0.497993 7:+6669737 MsG0780036340.01.T01:CDS
TGGAAGTACCATTGTGGAAG+GGG 0.498792 7:+6670818 MsG0780036340.01.T01:CDS
CGTGTGTAAGACAAGTTGGC+TGG 0.498941 7:+6673219 MsG0780036340.01.T01:CDS
TACCCCTTGGCAACTCTCGC+CGG 0.500761 7:+6669656 MsG0780036340.01.T01:CDS
GCAGGGGTCAGGACAGGCAG+TGG 0.506092 7:+6671753 MsG0780036340.01.T01:intron
CAGTCCGGCGAGAGTTGCCA+AGG 0.510833 7:-6669660 None:intergenic
TGAATCAGTTGAGGAAATGC+TGG 0.518098 7:+6674011 MsG0780036340.01.T01:intron
GAGACACACGGATGACAGTC+CGG 0.527393 7:-6669675 None:intergenic
TTACAGAGAAGGAAAATAGA+TGG 0.533764 7:+6674126 MsG0780036340.01.T01:three_prime_UTR
AGATGTGTTATAACAGGTAA+TGG 0.535089 7:+6673119 MsG0780036340.01.T01:intron
GGAACTGGGACGTTTGGTTG+TGG 0.537408 7:+6670798 MsG0780036340.01.T01:CDS
TCCTGGAATCTATAAGCAGC+CGG 0.539453 7:+6669696 MsG0780036340.01.T01:CDS
CGATTTGATGGACAGCAACC+AGG 0.542857 7:-6673823 None:intergenic
GCAAAGACAACCCTTCCAAA+AGG 0.544112 7:-6673179 None:intergenic
GTTTAGAGTCATTACAGAGA+AGG 0.550282 7:+6674115 MsG0780036340.01.T01:three_prime_UTR
ACAATTGTAGGTTCCTTGGA+TGG 0.551660 7:+6671809 MsG0780036340.01.T01:CDS
GCAATCGACGCCGTACCCCT+TGG 0.553345 7:+6669643 MsG0780036340.01.T01:CDS
TCTGGTTCTGGATCGATGAA+AGG 0.560073 7:-6673901 None:intergenic
ATGCATATCTTGGACGACCA+TGG 0.560477 7:+6673153 MsG0780036340.01.T01:CDS
CTGCTAGGGTGATTGGAACT+GGG 0.568123 7:+6670784 MsG0780036340.01.T01:intron
CAACTGGTTATGTATTCTTG+AGG 0.582694 7:+6672528 MsG0780036340.01.T01:CDS
ATATTCACTGCAAGTCTGCA+GGG 0.587199 7:+6672468 MsG0780036340.01.T01:CDS
CACTACCACACAATATTGCA+GGG 0.593261 7:-6674259 None:intergenic
CTGGAGTTACCTGCCATCCA+AGG 0.599000 7:-6671822 None:intergenic
TGTGGAAGTACCATTGTGGA+AGG 0.603430 7:+6670816 MsG0780036340.01.T01:CDS
GATCCGTGTGTAAGACAAGT+TGG 0.604656 7:+6673215 MsG0780036340.01.T01:CDS
GTGTGTAAGACAAGTTGGCT+GGG 0.607583 7:+6673220 MsG0780036340.01.T01:CDS
ACCCTTCCAAAAGGTCCCCA+TGG 0.611078 7:-6673170 None:intergenic
GACACACTGTATTTACACTA+CGG 0.615084 7:+6672362 MsG0780036340.01.T01:CDS
GTGGAAGTACCATTGTGGAA+GGG 0.617902 7:+6670817 MsG0780036340.01.T01:CDS
TGACTCTAAACATTGATACA+TGG 0.620435 7:-6674103 None:intergenic
TCTTGCTGGGTTGTGTCGTG+AGG 0.627214 7:+6669750 MsG0780036340.01.T01:CDS
AAATACCCTGCAATATTGTG+TGG 0.634768 7:+6674254 MsG0780036340.01.T01:three_prime_UTR
AGTCCGGCGAGAGTTGCCAA+GGG 0.640425 7:-6669659 None:intergenic
CAGCCAACTTGTCTTACACA+CGG 0.640543 7:-6673218 None:intergenic
GCATATCTTGGACGACCATG+GGG 0.645401 7:+6673155 MsG0780036340.01.T01:CDS
GTATACACCGTTTCACAGAA+CGG 0.651544 7:+6669592 MsG0780036340.01.T01:CDS
TTCGTCTTAGGAACATACAC+CGG 0.652883 7:-6669715 None:intergenic
AAGTACCATTGTGGAAGGGG+AGG 0.656420 7:+6670821 MsG0780036340.01.T01:CDS
TGTGTTATAACAGGTAATGG+AGG 0.662155 7:+6673122 MsG0780036340.01.T01:CDS
TATAGATTCCAGGAGACACA+CGG 0.668494 7:-6669687 None:intergenic
AAAGTCCTCCCCTTCCACAA+TGG 0.668810 7:-6670826 None:intergenic
AAATTGGTGTAGAGAACTGG+TGG 0.684406 7:+6673849 MsG0780036340.01.T01:CDS
TCAGTTGAGGAAATGCTGGA+TGG 0.691528 7:+6674015 MsG0780036340.01.T01:intron
ATACATGGATCATAAAGACA+TGG 0.691866 7:-6674088 None:intergenic
ATGACAGTTCTCCAATAGAG+CGG 0.702601 7:-6672447 None:intergenic
AAGTTGGCTGGGATAACTGG+GGG 0.713469 7:+6673231 MsG0780036340.01.T01:CDS
GTCCGGCGAGAGTTGCCAAG+GGG 0.714245 7:-6669658 None:intergenic
CAAGTTGGCTGGGATAACTG+GGG 0.717032 7:+6673230 MsG0780036340.01.T01:CDS
TGGTTGTGGAAGTACCATTG+TGG 0.723345 7:+6670812 MsG0780036340.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATAAATTCTATATATATGA+TGG + Chr7:6672702-6672721 MsG0780036340.01.T01:intron 10.0%
!!! ATTAAGTTTATAATGTTTTT+TGG + Chr7:6670192-6670211 MsG0780036340.01.T01:intron 10.0%
!!! GTTTTTTTAATATATTCATA+AGG - Chr7:6671987-6672006 None:intergenic 10.0%
!! AAACTAATACATAAAGATAA+GGG - Chr7:6671861-6671880 None:intergenic 15.0%
!! ATATTTGGAAAAGTAATAAA+TGG + Chr7:6672889-6672908 MsG0780036340.01.T01:intron 15.0%
!! GAATATATTAAAAAAACCAT+TGG + Chr7:6671990-6672009 MsG0780036340.01.T01:intron 15.0%
!! GTATTTATATAAGAGAATAA+TGG + Chr7:6671486-6671505 MsG0780036340.01.T01:intron 15.0%
!! TAAACTAATACATAAAGATA+AGG - Chr7:6671862-6671881 None:intergenic 15.0%
!! TAAATATAACAACTAAAACA+CGG - Chr7:6672604-6672623 None:intergenic 15.0%
!!! AAATTTTCTCAAATTATTAG+CGG + Chr7:6670328-6670347 MsG0780036340.01.T01:intron 15.0%
!!! ATTTTTGTTATAGAAAGTAA+AGG + Chr7:6673679-6673698 MsG0780036340.01.T01:intron 15.0%
!!! GTTCATGTTTTAATTTTTTT+GGG + Chr7:6670737-6670756 MsG0780036340.01.T01:intron 15.0%
!!! TCTTTTTGTTATGTTAATTT+GGG + Chr7:6669837-6669856 MsG0780036340.01.T01:CDS 15.0%
!!! TTCATGTTTTAATTTTTTTG+GGG + Chr7:6670738-6670757 MsG0780036340.01.T01:intron 15.0%
!!! TTCTTTTTGTTATGTTAATT+TGG + Chr7:6669836-6669855 MsG0780036340.01.T01:CDS 15.0%
!!! TTGATAATATTGATAATATG+TGG + Chr7:6670569-6670588 MsG0780036340.01.T01:intron 15.0%
!! AAATACTTTAATGAACCAAA+AGG - Chr7:6673070-6673089 None:intergenic 20.0%
!! AACTAATACATAAAGATAAG+GGG - Chr7:6671860-6671879 None:intergenic 20.0%
!! AATCATAAAACATTACAGAA+TGG - Chr7:6673319-6673338 None:intergenic 20.0%
!! AATTAGATTAGTAAGTTTGA+TGG + Chr7:6671657-6671676 MsG0780036340.01.T01:intron 20.0%
!! ATCAAACTTACTAATCTAAT+TGG - Chr7:6671658-6671677 None:intergenic 20.0%
!! ATTCAAATCCTATATTCTTA+AGG + Chr7:6673482-6673501 MsG0780036340.01.T01:intron 20.0%
!! GTTATATTTAGGAATAAAGT+AGG + Chr7:6672968-6672987 MsG0780036340.01.T01:intron 20.0%
!! TAAGAGAATAATGGTAAATT+TGG + Chr7:6671495-6671514 MsG0780036340.01.T01:intron 20.0%
!! TAATAATTAGAAAATGGAAG+TGG - Chr7:6672218-6672237 None:intergenic 20.0%
!! TACAATTTCAATTACCAATT+TGG - Chr7:6670065-6670084 None:intergenic 20.0%
!! TATAAACTGAATACAACTTA+TGG - Chr7:6673592-6673611 None:intergenic 20.0%
!! TGAATTGAAAATATGAGTAT+AGG - Chr7:6672666-6672685 None:intergenic 20.0%
!!! AGAATTTAAAACAGAATCTA+GGG - Chr7:6672295-6672314 None:intergenic 20.0%
!!! AGATTCTGTTTTAAATTCTA+TGG + Chr7:6672296-6672315 MsG0780036340.01.T01:intron 20.0%
!!! ATTGGTAATTGAAATTGTAT+AGG + Chr7:6670066-6670085 MsG0780036340.01.T01:intron 20.0%
!!! CTTTATGTATTAGTTTATGT+AGG + Chr7:6671865-6671884 MsG0780036340.01.T01:intron 20.0%
!!! CTTTTTGTTATGTTAATTTG+GGG + Chr7:6669838-6669857 MsG0780036340.01.T01:CDS 20.0%
!!! GGTTCATGTTTTAATTTTTT+TGG + Chr7:6670736-6670755 MsG0780036340.01.T01:intron 20.0%
!!! TAGAATTTAAAACAGAATCT+AGG - Chr7:6672296-6672315 None:intergenic 20.0%
!!! TTCCATTTTCTAATTATTAG+CGG + Chr7:6672219-6672238 MsG0780036340.01.T01:intron 20.0%
!!! TTTTTAATGTTGCATCTATA+TGG + Chr7:6670691-6670710 MsG0780036340.01.T01:intron 20.0%
! AAACAGATGAAAATACTATC+AGG - Chr7:6674063-6674082 None:intergenic 25.0%
! AATACCTTATATAACACTTC+TGG + Chr7:6671712-6671731 MsG0780036340.01.T01:intron 25.0%
! AATATAACCTCCATTCATAA+TGG - Chr7:6673346-6673365 None:intergenic 25.0%
! AATATTAGATCCTACCATTT+GGG + Chr7:6671094-6671113 MsG0780036340.01.T01:intron 25.0%
! ACTAATACATAAAGATAAGG+GGG - Chr7:6671859-6671878 None:intergenic 25.0%
! AGGATAACTTAATTCTATGA+AGG - Chr7:6671967-6671986 None:intergenic 25.0%
! ATTATGTTGTAACTACATAC+AGG + Chr7:6673791-6673810 MsG0780036340.01.T01:intron 25.0%
! CTTAGTTTAGTGTTGTAATT+TGG - Chr7:6671185-6671204 None:intergenic 25.0%
! GGAATAAAGTAGGATTAAAT+TGG + Chr7:6672978-6672997 MsG0780036340.01.T01:intron 25.0%
! GGATCTATATCTTAAGTAAT+CGG - Chr7:6671550-6671569 None:intergenic 25.0%
! GTTTACCAAAATCATTATCA+TGG + Chr7:6671371-6671390 MsG0780036340.01.T01:intron 25.0%
! TACAATTTGAAGACCAATTT+GGG + Chr7:6670610-6670629 MsG0780036340.01.T01:CDS 25.0%
! TACCGCTAATAATTAGAAAA+TGG - Chr7:6672224-6672243 None:intergenic 25.0%
! TAGAGATGTAATATTAACGA+TGG + Chr7:6670511-6670530 MsG0780036340.01.T01:intron 25.0%
! TAGTATTATGATGTTATGAG+TGG + Chr7:6672865-6672884 MsG0780036340.01.T01:intron 25.0%
! TCCAAAAGGAAGTTATATTT+AGG + Chr7:6672957-6672976 MsG0780036340.01.T01:intron 25.0%
! TGAAACAAGGCTTATATTTA+GGG + Chr7:6672921-6672940 MsG0780036340.01.T01:intron 25.0%
! TTGAAACAAGGCTTATATTT+AGG + Chr7:6672920-6672939 MsG0780036340.01.T01:intron 25.0%
! TTGAAAGATTGCTATATTGA+AGG + Chr7:6672395-6672414 MsG0780036340.01.T01:CDS 25.0%
! TTGAACATAATCTGATATGT+CGG + Chr7:6669980-6669999 MsG0780036340.01.T01:intron 25.0%
! TTGAAGCTTCAATAAAATTG+CGG + Chr7:6671426-6671445 MsG0780036340.01.T01:intron 25.0%
!! ACTTTTCCATAAATAGGATT+AGG + Chr7:6671519-6671538 MsG0780036340.01.T01:intron 25.0%
!! ATATTGATAATATGTGGACT+AGG + Chr7:6670575-6670594 MsG0780036340.01.T01:intron 25.0%
!! ATTTCAATTTTGCAACTTCA+TGG - Chr7:6670137-6670156 None:intergenic 25.0%
!! GATTATGCTAGAAATTTTCA+TGG + Chr7:6673420-6673439 MsG0780036340.01.T01:intron 25.0%
!! TCCTAAATATAACTTCCTTT+TGG - Chr7:6672961-6672980 None:intergenic 25.0%
!! TTACGAGATAAATTTTGCAT+AGG - Chr7:6673752-6673771 None:intergenic 25.0%
!! TTATGTTAATTTGGGGTAAT+GGG + Chr7:6669845-6669864 MsG0780036340.01.T01:CDS 25.0%
!!! AAAACCAGAAGTGTTATATA+AGG - Chr7:6671719-6671738 None:intergenic 25.0%
!!! TAAAGTATTTTACAACTGAG+TGG + Chr7:6673080-6673099 MsG0780036340.01.T01:intron 25.0%
!!! TTTCACCATGATAATGATTT+TGG - Chr7:6671379-6671398 None:intergenic 25.0%
!!! TTTGGAACTTTTCCATAAAT+AGG + Chr7:6671513-6671532 MsG0780036340.01.T01:intron 25.0%
!!! TTTTAATTTTTTTGGGGTTG+TGG + Chr7:6670744-6670763 MsG0780036340.01.T01:intron 25.0%
AAGTAAACAAGTGATGGTAA+AGG - Chr7:6670947-6670966 None:intergenic 30.0%
AATGAGATTGTACCTAAGAT+CGG + Chr7:6671035-6671054 MsG0780036340.01.T01:intron 30.0%
ACATAAGACCAAATAGTCTT+TGG - Chr7:6672124-6672143 None:intergenic 30.0%
ACCAGGATAACTTAAGAAAA+CGG + Chr7:6673625-6673644 MsG0780036340.01.T01:intron 30.0%
AGAAAGTAAAGGTTGTAGTT+GGG + Chr7:6673690-6673709 MsG0780036340.01.T01:intron 30.0%
AGATGTGTTATAACAGGTAA+TGG + Chr7:6673119-6673138 MsG0780036340.01.T01:intron 30.0%
AGGAAATCTCATACAGAAAA+AGG - Chr7:6674043-6674062 None:intergenic 30.0%
AGGTAACTAAGATCCATTTA+AGG + Chr7:6670420-6670439 MsG0780036340.01.T01:intron 30.0%
AGTTTAGTGTTGTAATTTGG+CGG - Chr7:6671182-6671201 None:intergenic 30.0%
ATAACATAAGGAAAGAATCC+CGG - Chr7:6673044-6673063 None:intergenic 30.0%
ATACATGGATCATAAAGACA+TGG - Chr7:6674091-6674110 None:intergenic 30.0%
ATGATTCACACCATTATGAA+TGG + Chr7:6673333-6673352 MsG0780036340.01.T01:intron 30.0%
ATGGTAGGATCTAATATTCA+TGG - Chr7:6671092-6671111 None:intergenic 30.0%
ATTATTATTCTCGAGACAAC+AGG - Chr7:6672075-6672094 None:intergenic 30.0%
CAAATATATCACTTAGCCAA+TGG - Chr7:6672009-6672028 None:intergenic 30.0%
CTAATACATAAAGATAAGGG+GGG - Chr7:6671858-6671877 None:intergenic 30.0%
CTACAATTTGAAGACCAATT+TGG + Chr7:6670609-6670628 MsG0780036340.01.T01:CDS 30.0%
GAAACAAGGCTTATATTTAG+GGG + Chr7:6672922-6672941 MsG0780036340.01.T01:intron 30.0%
GAATATTAGATCCTACCATT+TGG + Chr7:6671093-6671112 MsG0780036340.01.T01:intron 30.0%
GACATTTACTCAGAAAACAT+TGG - Chr7:6670043-6670062 None:intergenic 30.0%
GAGAACAGAATTAATGTCAA+TGG - Chr7:6671571-6671590 None:intergenic 30.0%
GATCAATGCCTTAAGAATAT+AGG - Chr7:6673493-6673512 None:intergenic 30.0%
GATGTTATGAGTGGTATATT+TGG + Chr7:6672874-6672893 MsG0780036340.01.T01:intron 30.0%
GGTAACTAAGATCCATTTAA+GGG + Chr7:6670421-6670440 MsG0780036340.01.T01:intron 30.0%
GTAACTAAGATCCATTTAAG+GGG + Chr7:6670422-6670441 MsG0780036340.01.T01:intron 30.0%
TAGAAAGTAAAGGTTGTAGT+TGG + Chr7:6673689-6673708 MsG0780036340.01.T01:intron 30.0%
TATAAATACTGCACAATGTC+TGG - Chr7:6671475-6671494 None:intergenic 30.0%
TATATTTGCATTAACTGACC+AGG + Chr7:6673608-6673627 MsG0780036340.01.T01:intron 30.0%
TCATGACAAAACTAGTTATC+TGG - Chr7:6672331-6672350 None:intergenic 30.0%
TCTCAAATAACCAATCAAAG+AGG - Chr7:6673534-6673553 None:intergenic 30.0%
TGACTCTAAACATTGATACA+TGG - Chr7:6674106-6674125 None:intergenic 30.0%
TGGAACGAAAATATATATCC+AGG + Chr7:6671677-6671696 MsG0780036340.01.T01:intron 30.0%
TGGCTAAGTGATATATTTGT+TGG + Chr7:6672010-6672029 MsG0780036340.01.T01:intron 30.0%
TTACAAATGTAGCCTATGTT+TGG + Chr7:6671337-6671356 MsG0780036340.01.T01:intron 30.0%
TTACAGAGAAGGAAAATAGA+TGG + Chr7:6674126-6674145 MsG0780036340.01.T01:three_prime_UTR 30.0%
TTCTGAGTAAATGTCCAAAT+TGG + Chr7:6670048-6670067 MsG0780036340.01.T01:intron 30.0%
TTTACTTTGCTGAATGGTAT+TGG + Chr7:6670960-6670979 MsG0780036340.01.T01:intron 30.0%
! ATCTCTAACCATTTTGTCTA+TGG - Chr7:6670498-6670517 None:intergenic 30.0%
! CTTTGATTGGTTATTTGAGA+TGG + Chr7:6673534-6673553 MsG0780036340.01.T01:intron 30.0%
! GAGTCAAATTGTTTTCGTAT+CGG - Chr7:6673651-6673670 None:intergenic 30.0%
! GGAAAAACATTTGTTGAAAG+AGG - Chr7:6670452-6670471 None:intergenic 30.0%
! GTGAATTCATTACATGGTTT+TGG + Chr7:6671607-6671626 MsG0780036340.01.T01:intron 30.0%
! GTTATGTTAATTTGGGGTAA+TGG + Chr7:6669844-6669863 MsG0780036340.01.T01:CDS 30.0%
! TCTCTAACCATTTTGTCTAT+GGG - Chr7:6670497-6670516 None:intergenic 30.0%
! TTCGGATTTTATGATTGTGT+TGG + Chr7:6672797-6672816 MsG0780036340.01.T01:intron 30.0%
! TTTTCCTTTCCTAGTTTCTA+GGG + Chr7:6673010-6673029 MsG0780036340.01.T01:intron 30.0%
! TTTTGTCATGATTTTTGTCC+AGG + Chr7:6672340-6672359 MsG0780036340.01.T01:intron 30.0%
! TTTTTCCTTTCCTAGTTTCT+AGG + Chr7:6673009-6673028 MsG0780036340.01.T01:intron 30.0%
!! ACTCGATGTTTTGTTCATTT+GGG + Chr7:6670637-6670656 MsG0780036340.01.T01:CDS 30.0%
!! ATCAATTCTCTGAGATTTAG+AGG - Chr7:6671215-6671234 None:intergenic 30.0%
!! ATGGTTCTAGTATTGAAACA+AGG + Chr7:6672908-6672927 MsG0780036340.01.T01:intron 30.0%
!! CAAATTGGTCTTCAAATTGT+AGG - Chr7:6670611-6670630 None:intergenic 30.0%
!! GTTTTGTTCATTTGGGTAAT+GGG + Chr7:6670644-6670663 MsG0780036340.01.T01:CDS 30.0%
!! TACTCGATGTTTTGTTCATT+TGG + Chr7:6670636-6670655 MsG0780036340.01.T01:CDS 30.0%
!! TGCAACTTCATGGATTATTT+TGG - Chr7:6670127-6670146 None:intergenic 30.0%
!! TGTTTTGTTCATTTGGGTAA+TGG + Chr7:6670643-6670662 MsG0780036340.01.T01:CDS 30.0%
!!! CTAAGCTTTTTAAGTTAACG+TGG - Chr7:6671404-6671423 None:intergenic 30.0%
!!! GGCAATTTTTTCTTTCCAAA+AGG + Chr7:6672943-6672962 MsG0780036340.01.T01:intron 30.0%
AAAAGTAGCACTTTGCTTAG+TGG - Chr7:6673459-6673478 None:intergenic 35.0%
AAAGTAAAGGTTGTAGTTGG+GGG + Chr7:6673692-6673711 MsG0780036340.01.T01:intron 35.0%
AAATACCCTGCAATATTGTG+TGG + Chr7:6674254-6674273 MsG0780036340.01.T01:three_prime_UTR 35.0%
AAATTGTCGCTCTGTTTGTA+GGG + Chr7:6670158-6670177 MsG0780036340.01.T01:intron 35.0%
AAGAATTTCATCACTCTTGC+TGG + Chr7:6669736-6669755 MsG0780036340.01.T01:CDS 35.0%
AAGCTTCAATAAAATTGCGG+TGG + Chr7:6671429-6671448 MsG0780036340.01.T01:intron 35.0%
AAGGAACCTACAATTGTAGA+AGG - Chr7:6671806-6671825 None:intergenic 35.0%
AATGGATCTTAGTTACCTTG+AGG - Chr7:6670418-6670437 None:intergenic 35.0%
ACATCGAGTAATACCCAAAT+TGG - Chr7:6670626-6670645 None:intergenic 35.0%
ACCAAAAGGTCCATAACATA+AGG - Chr7:6673056-6673075 None:intergenic 35.0%
ACCATGTCAACTACTGATAA+CGG - Chr7:6671292-6671311 None:intergenic 35.0%
AGAATTTCATCACTCTTGCT+GGG + Chr7:6669737-6669756 MsG0780036340.01.T01:CDS 35.0%
ATACTTCTACCACAACATTG+AGG - Chr7:6672775-6672794 None:intergenic 35.0%
ATGAGATTGTACCTAAGATC+GGG + Chr7:6671036-6671055 MsG0780036340.01.T01:intron 35.0%
ATGAGATTGTTAACAGTGGA+TGG - Chr7:6672568-6672587 None:intergenic 35.0%
ATGGATCTTAGTTACCTTGA+GGG - Chr7:6670417-6670436 None:intergenic 35.0%
ATTCACACCATTATGAATGG+AGG + Chr7:6673336-6673355 MsG0780036340.01.T01:intron 35.0%
CAACTGGTTATGTATTCTTG+AGG + Chr7:6672528-6672547 MsG0780036340.01.T01:CDS 35.0%
CAATAAAATTGCGGTGGAAA+TGG + Chr7:6671435-6671454 MsG0780036340.01.T01:intron 35.0%
CACTTGTTTACTTTGCTGAA+TGG + Chr7:6670954-6670973 MsG0780036340.01.T01:intron 35.0%
CATTGCAGATGTGTTATAAC+AGG + Chr7:6673113-6673132 MsG0780036340.01.T01:intron 35.0%
CTGTTATAACACATCTGCAA+TGG - Chr7:6673115-6673134 None:intergenic 35.0%
GAAAGTAAAGGTTGTAGTTG+GGG + Chr7:6673691-6673710 MsG0780036340.01.T01:intron 35.0%
GACAAAACTAGTTATCTGGT+CGG - Chr7:6672327-6672346 None:intergenic 35.0%
GACACACTGTATTTACACTA+CGG + Chr7:6672362-6672381 MsG0780036340.01.T01:CDS 35.0%
GCAGATCCTAATCCTATTTA+TGG - Chr7:6671528-6671547 None:intergenic 35.0%
GGACATTCATATGCATATCT+TGG + Chr7:6673143-6673162 MsG0780036340.01.T01:CDS 35.0%
GGGATTCTTTCCTTATGTTA+TGG + Chr7:6673043-6673062 MsG0780036340.01.T01:intron 35.0%
GTAGATGAGATTGTTAACAG+TGG - Chr7:6672572-6672591 None:intergenic 35.0%
GTGATGAAATTCTTCGTCTT+AGG - Chr7:6669730-6669749 None:intergenic 35.0%
TACTTCTACCACAACATTGA+GGG - Chr7:6672774-6672793 None:intergenic 35.0%
TAGTTGACATGGTGATAGTT+GGG + Chr7:6671299-6671318 MsG0780036340.01.T01:intron 35.0%
TCAATGTTGTGGTAGAAGTA+TGG + Chr7:6672774-6672793 MsG0780036340.01.T01:intron 35.0%
TCAGCAAAGTAAACAAGTGA+TGG - Chr7:6670953-6670972 None:intergenic 35.0%
TCTCAAATTATTAGCGGTGT+CGG + Chr7:6670334-6670353 MsG0780036340.01.T01:intron 35.0%
TGTCTTTGCATACACTTACA+TGG + Chr7:6673193-6673212 MsG0780036340.01.T01:CDS 35.0%
TTAGCTGGTATGTGTCAAAA+TGG + Chr7:6670715-6670734 MsG0780036340.01.T01:intron 35.0%
TTCTACAATTGTAGGTTCCT+TGG + Chr7:6671805-6671824 MsG0780036340.01.T01:CDS 35.0%
TTCTTAAGCTGTCTCTGATA+TGG + Chr7:6672628-6672647 MsG0780036340.01.T01:intron 35.0%
TTGAATGTAACCACATGTCT+CGG - Chr7:6672195-6672214 None:intergenic 35.0%
TTGCATCTATATGGTTTAGC+TGG + Chr7:6670700-6670719 MsG0780036340.01.T01:intron 35.0%
TTGTTGTCACGTCTGATATA+CGG + Chr7:6672258-6672277 MsG0780036340.01.T01:intron 35.0%
! AAATGTTTTTCCATACGCGT+TGG + Chr7:6670460-6670479 MsG0780036340.01.T01:intron 35.0%
! GTAACTACATACAGGTGTTT+TGG + Chr7:6673799-6673818 MsG0780036340.01.T01:intron 35.0%
! GTTTAGAGTCATTACAGAGA+AGG + Chr7:6674115-6674134 MsG0780036340.01.T01:three_prime_UTR 35.0%
! TCCTTATGTTATGGACCTTT+TGG + Chr7:6673052-6673071 MsG0780036340.01.T01:intron 35.0%
! TGAGTGTACATTTTCCCAAA+TGG - Chr7:6671111-6671130 None:intergenic 35.0%
! TGTACATTTTCCCAAATGGT+AGG - Chr7:6671107-6671126 None:intergenic 35.0%
! TGTGTTATAACAGGTAATGG+AGG + Chr7:6673122-6673141 MsG0780036340.01.T01:CDS 35.0%
! TTTTACAACTGAGTGGTTTC+CGG + Chr7:6673087-6673106 MsG0780036340.01.T01:intron 35.0%
!! ATTGCCACTTTGTTATACCA+AGG + Chr7:6672738-6672757 MsG0780036340.01.T01:intron 35.0%
!! GTGCTTGCTTTTATGAATAC+AGG + Chr7:6673273-6673292 MsG0780036340.01.T01:CDS 35.0%
AAACGTGCATAAGTGTGTGT+TGG + Chr7:6670989-6671008 MsG0780036340.01.T01:intron 40.0%
AAAGAGGTCAACCCCTTAAA+TGG - Chr7:6670436-6670455 None:intergenic 40.0%
AAATCATCGCAAGAAGCAAC+TGG + Chr7:6672512-6672531 MsG0780036340.01.T01:CDS 40.0%
AAATTGCGGTGGAAATGGTT+AGG + Chr7:6671440-6671459 MsG0780036340.01.T01:intron 40.0%
AAATTGGTGTAGAGAACTGG+TGG + Chr7:6673849-6673868 MsG0780036340.01.T01:CDS 40.0%
AACTAAAACACGGTGATGAG+TGG - Chr7:6672594-6672613 None:intergenic 40.0%
AAGCTGTCTCTGATATGGAA+AGG + Chr7:6672633-6672652 MsG0780036340.01.T01:intron 40.0%
AATTGCGGTGGAAATGGTTA+GGG + Chr7:6671441-6671460 MsG0780036340.01.T01:intron 40.0%
AATTTCACGTGCATTACCTC+AGG - Chr7:6670885-6670904 None:intergenic 40.0%
ACAATTGTAGGTTCCTTGGA+TGG + Chr7:6671809-6671828 MsG0780036340.01.T01:CDS 40.0%
AGATTGTTAACAGTGGATGG+CGG - Chr7:6672565-6672584 None:intergenic 40.0%
AGCAAATTGGTGTAGAGAAC+TGG + Chr7:6673846-6673865 MsG0780036340.01.T01:CDS 40.0%
AGCTGTCTCTGATATGGAAA+GGG + Chr7:6672634-6672653 MsG0780036340.01.T01:intron 40.0%
AGGAGCAAACACATTGGATT+TGG - Chr7:6670917-6670936 None:intergenic 40.0%
AGTGTAAATACAGTGTGTCC+TGG - Chr7:6672361-6672380 None:intergenic 40.0%
ATATTCACTGCAAGTCTGCA+GGG + Chr7:6672468-6672487 MsG0780036340.01.T01:CDS 40.0%
ATCCAGAACCAGATAGATCT+TGG + Chr7:6673911-6673930 MsG0780036340.01.T01:CDS 40.0%
ATGACAGTTCTCCAATAGAG+CGG - Chr7:6672450-6672469 None:intergenic 40.0%
ATTGTACCTAAGATCGGGAA+CGG + Chr7:6671041-6671060 MsG0780036340.01.T01:intron 40.0%
CAAATTGTCGCTCTGTTTGT+AGG + Chr7:6670157-6670176 MsG0780036340.01.T01:intron 40.0%
CACTACCACACAATATTGCA+GGG - Chr7:6674262-6674281 None:intergenic 40.0%
CATAAAGATAAGGGGGGAAA+TGG - Chr7:6671852-6671871 None:intergenic 40.0%
CCATGTCAACTACTGATAAC+GGG - Chr7:6671291-6671310 None:intergenic 40.0%
GAGCATTTCTACGCAGAATA+TGG - Chr7:6673964-6673983 None:intergenic 40.0%
GATGAAGCATGAATCAGTTG+AGG + Chr7:6674002-6674021 MsG0780036340.01.T01:intron 40.0%
GATGTGCCTTCTACAATTGT+AGG + Chr7:6671797-6671816 MsG0780036340.01.T01:CDS 40.0%
GCATCAACCCATAGACAAAA+TGG + Chr7:6670487-6670506 MsG0780036340.01.T01:intron 40.0%
GCGTGTGTGAATTCATTACA+TGG + Chr7:6671601-6671620 MsG0780036340.01.T01:intron 40.0%
GCTGTGATCCAAAGACTATT+TGG + Chr7:6672113-6672132 MsG0780036340.01.T01:intron 40.0%
GGTATTTCACTGTTTGTACC+TGG - Chr7:6671698-6671717 None:intergenic 40.0%
GTAGTTGACATGGTGATAGT+TGG + Chr7:6671298-6671317 MsG0780036340.01.T01:intron 40.0%
GTATACACCGTTTCACAGAA+CGG + Chr7:6669592-6669611 MsG0780036340.01.T01:CDS 40.0%
GTATTAAGGGCCTCTTTGAT+TGG + Chr7:6673521-6673540 MsG0780036340.01.T01:intron 40.0%
GTCCATCAAATCGAGCAAAT+TGG + Chr7:6673833-6673852 MsG0780036340.01.T01:CDS 40.0%
GTTGCCTTGGTATAACAAAG+TGG - Chr7:6672745-6672764 None:intergenic 40.0%
TATAGATTCCAGGAGACACA+CGG - Chr7:6669690-6669709 None:intergenic 40.0%
TCACTACCACACAATATTGC+AGG - Chr7:6674263-6674282 None:intergenic 40.0%
TCTTATGTTCCATGAAGCAC+TGG + Chr7:6672136-6672155 MsG0780036340.01.T01:intron 40.0%
TGAATCAGTTGAGGAAATGC+TGG + Chr7:6674011-6674030 MsG0780036340.01.T01:intron 40.0%
TGGATCTTAGTTACCTTGAG+GGG - Chr7:6670416-6670435 None:intergenic 40.0%
TTCGTCTTAGGAACATACAC+CGG - Chr7:6669718-6669737 None:intergenic 40.0%
TTGCACCGTTTGAAAATCTC+CGG - Chr7:6669620-6669639 None:intergenic 40.0%
! AATTTTTGTTGCAGCCTGCT+AGG + Chr7:6670769-6670788 MsG0780036340.01.T01:intron 40.0%
! ATTTTTGTTGCAGCCTGCTA+GGG + Chr7:6670770-6670789 MsG0780036340.01.T01:intron 40.0%
! CACCAATTTGCTCGATTTGA+TGG - Chr7:6673838-6673857 None:intergenic 40.0%
! CGATGATTTTCTACTCTGTG+CGG - Chr7:6672501-6672520 None:intergenic 40.0%
! GTTGTGGTAGAAGTATGGTT+CGG + Chr7:6672779-6672798 MsG0780036340.01.T01:intron 40.0%
! TGATCCCAGCAGAGTATTAA+GGG + Chr7:6673508-6673527 MsG0780036340.01.T01:intron 40.0%
! TTGATCCCAGCAGAGTATTA+AGG + Chr7:6673507-6673526 MsG0780036340.01.T01:intron 40.0%
! TTGCTCAAAGAATGGGTTTG+AGG + Chr7:6673935-6673954 MsG0780036340.01.T01:CDS 40.0%
!! ATCTTGGCTTGCTCAAAGAA+TGG + Chr7:6673927-6673946 MsG0780036340.01.T01:CDS 40.0%
!! CTGGTTTTTCCTTCTCTTTC+TGG + Chr7:6671731-6671750 MsG0780036340.01.T01:intron 40.0%
!! GCCGTTTTCTTAAGTTATCC+TGG - Chr7:6673629-6673648 None:intergenic 40.0%
!! GGAAGCGTTGATTTCATCTT+TGG + Chr7:6672416-6672435 MsG0780036340.01.T01:CDS 40.0%
!! GGATTAGTCAGTATGAAGCA+CGG - Chr7:6670395-6670414 None:intergenic 40.0%
!! TCAACTACTGATAACGGGAA+GGG - Chr7:6671286-6671305 None:intergenic 40.0%
!! TCTTGGCTTGCTCAAAGAAT+GGG + Chr7:6673928-6673947 MsG0780036340.01.T01:CDS 40.0%
!! TTTTCCTTCTCTTTCTGGCA+GGG + Chr7:6671736-6671755 MsG0780036340.01.T01:intron 40.0%
!! TTTTTCCTTCTCTTTCTGGC+AGG + Chr7:6671735-6671754 MsG0780036340.01.T01:intron 40.0%
ACGTTCTTCCCTCAATGTTG+TGG + Chr7:6672763-6672782 MsG0780036340.01.T01:intron 45.0%
ACTAGCAGGAGCAAACACAT+TGG - Chr7:6670923-6670942 None:intergenic 45.0%
AGAGCCCTAGAAACTAGGAA+AGG - Chr7:6673017-6673036 None:intergenic 45.0%
ATGCATATCTTGGACGACCA+TGG + Chr7:6673153-6673172 MsG0780036340.01.T01:CDS 45.0%
CAGCCAACTTGTCTTACACA+CGG - Chr7:6673221-6673240 None:intergenic 45.0%
CATATTCACTGCAAGTCTGC+AGG + Chr7:6672467-6672486 MsG0780036340.01.T01:CDS 45.0%
CCCGTTATCAGTAGTTGACA+TGG + Chr7:6671288-6671307 MsG0780036340.01.T01:intron 45.0%
GAACAAGAGCCCTAGAAACT+AGG - Chr7:6673022-6673041 None:intergenic 45.0%
GATCCGTGTGTAAGACAAGT+TGG + Chr7:6673215-6673234 MsG0780036340.01.T01:CDS 45.0%
GCAAAGACAACCCTTCCAAA+AGG - Chr7:6673182-6673201 None:intergenic 45.0%
GTCAGTATGAAGCACGGATA+CGG - Chr7:6670389-6670408 None:intergenic 45.0%
GTGAGGATACTGTGCTTACT+TGG + Chr7:6669767-6669786 MsG0780036340.01.T01:CDS 45.0%
GTGATGGTAAAGGAACTAGC+AGG - Chr7:6670937-6670956 None:intergenic 45.0%
TAACACATCTGCAATGGCAC+CGG - Chr7:6673109-6673128 None:intergenic 45.0%
TCAGTTGAGGAAATGCTGGA+TGG + Chr7:6674015-6674034 MsG0780036340.01.T01:intron 45.0%
TCCTGGAATCTATAAGCAGC+CGG + Chr7:6669696-6669715 MsG0780036340.01.T01:CDS 45.0%
TCTTAAGTGCCAGTGCTTCA+TGG - Chr7:6672148-6672167 None:intergenic 45.0%
TGAATTCACACACGCATGTC+TGG - Chr7:6671596-6671615 None:intergenic 45.0%
TGAGCAAGCCAAGATCTATC+TGG - Chr7:6673922-6673941 None:intergenic 45.0%
TGCATATCTTGGACGACCAT+GGG + Chr7:6673154-6673173 MsG0780036340.01.T01:CDS 45.0%
TGGAAATAGCACCGCTCTAT+TGG + Chr7:6672436-6672455 MsG0780036340.01.T01:CDS 45.0%
TTGCAGGCGGAGAATATCTT+TGG - Chr7:6670225-6670244 None:intergenic 45.0%
! ACAAGTTGGCTGGGATAACT+GGG + Chr7:6673229-6673248 MsG0780036340.01.T01:CDS 45.0%
! AGCCAAGATCTATCTGGTTC+TGG - Chr7:6673916-6673935 None:intergenic 45.0%
! ATCTGATATGTCGGTGCTCA+TGG + Chr7:6669989-6670008 MsG0780036340.01.T01:intron 45.0%
! CATACTGACTAATCCCCTCA+AGG + Chr7:6670400-6670419 MsG0780036340.01.T01:intron 45.0%
! CGGAACCGGAGATTTTCAAA+CGG + Chr7:6669612-6669631 MsG0780036340.01.T01:CDS 45.0%
! GTGTGTAAGACAAGTTGGCT+GGG + Chr7:6673220-6673239 MsG0780036340.01.T01:CDS 45.0%
! TCTGATATGTCGGTGCTCAT+GGG + Chr7:6669990-6670009 MsG0780036340.01.T01:intron 45.0%
! TTTCCTTCTCTTTCTGGCAG+GGG + Chr7:6671737-6671756 MsG0780036340.01.T01:intron 45.0%
!! AAGCACTGGCACTTAAGACT+GGG + Chr7:6672150-6672169 MsG0780036340.01.T01:intron 45.0%
!! ACATACAGGTGTTTTGGACC+TGG + Chr7:6673805-6673824 MsG0780036340.01.T01:intron 45.0%
!! AGTTTCTAGGGCTCTTGTTC+CGG + Chr7:6673022-6673041 MsG0780036340.01.T01:intron 45.0%
!! GTAGCCTATGTTTGGTTCTG+CGG + Chr7:6671345-6671364 MsG0780036340.01.T01:intron 45.0%
!! GTCAACTACTGATAACGGGA+AGG - Chr7:6671287-6671306 None:intergenic 45.0%
!! GTGGAAGTACCATTGTGGAA+GGG + Chr7:6670817-6670836 MsG0780036340.01.T01:CDS 45.0%
!! TCTGGTTCTGGATCGATGAA+AGG - Chr7:6673904-6673923 None:intergenic 45.0%
!! TGGAAGTACCATTGTGGAAG+GGG + Chr7:6670818-6670837 MsG0780036340.01.T01:CDS 45.0%
!! TGGTTGTGGAAGTACCATTG+TGG + Chr7:6670812-6670831 MsG0780036340.01.T01:CDS 45.0%
!! TGTGGAAGTACCATTGTGGA+AGG + Chr7:6670816-6670835 MsG0780036340.01.T01:CDS 45.0%
!! TTTTGAGAACTCTGCACCTG+AGG + Chr7:6670866-6670885 MsG0780036340.01.T01:CDS 45.0%
!! TTTTTCCATACGCGTTGGTC+TGG + Chr7:6670465-6670484 MsG0780036340.01.T01:intron 45.0%
AAAGTCCTCCCCTTCCACAA+TGG - Chr7:6670829-6670848 None:intergenic 50.0%
AAGAAGCCGTTCCCGATCTT+AGG - Chr7:6671050-6671069 None:intergenic 50.0%
AAGTACCATTGTGGAAGGGG+AGG + Chr7:6670821-6670840 MsG0780036340.01.T01:CDS 50.0%
AAGTTGGCTGGGATAACTGG+GGG + Chr7:6673231-6673250 MsG0780036340.01.T01:CDS 50.0%
AATGAAGCACGGACACTCCT+CGG + Chr7:6670253-6670272 MsG0780036340.01.T01:intron 50.0%
ACCGGCTGCTTATAGATTCC+AGG - Chr7:6669700-6669719 None:intergenic 50.0%
ACCGTTTCACAGAACGGAAC+CGG + Chr7:6669598-6669617 MsG0780036340.01.T01:CDS 50.0%
AGAGGCCCTTAATACTCTGC+TGG - Chr7:6673516-6673535 None:intergenic 50.0%
CAACTGCACCGAATGAAGCA+CGG + Chr7:6670242-6670261 MsG0780036340.01.T01:intron 50.0%
CGTTCCGCAGAACCAAACAT+AGG - Chr7:6671352-6671371 None:intergenic 50.0%
CTGCTAGGGTGATTGGAACT+GGG + Chr7:6670784-6670803 MsG0780036340.01.T01:intron 50.0%
GAGGCCCTTAATACTCTGCT+GGG - Chr7:6673515-6673534 None:intergenic 50.0%
GCACTTAAGACTGGGTCTCA+AGG + Chr7:6672158-6672177 MsG0780036340.01.T01:intron 50.0%
GCATATCTTGGACGACCATG+GGG + Chr7:6673155-6673174 MsG0780036340.01.T01:CDS 50.0%
GGGGGAAAGTAGAGAATGAG+AGG + Chr7:6673249-6673268 MsG0780036340.01.T01:CDS 50.0%
GTGATTGGAACTGGGACGTT+TGG + Chr7:6670792-6670811 MsG0780036340.01.T01:CDS 50.0%
TAAGGGGGGAAATGGAGTAC+TGG - Chr7:6671844-6671863 None:intergenic 50.0%
TCAAATTCTCGTGCAGCGTC+TGG + Chr7:6673719-6673738 MsG0780036340.01.T01:intron 50.0%
TCCGGTTCCGTTCTGTGAAA+CGG - Chr7:6669602-6669621 None:intergenic 50.0%
TTGAGGGAAGAACGTTGCCT+TGG - Chr7:6672758-6672777 None:intergenic 50.0%
TTGTAGGTTCCTTGGATGGC+AGG + Chr7:6671813-6671832 MsG0780036340.01.T01:CDS 50.0%
! CAAGTTGGCTGGGATAACTG+GGG + Chr7:6673230-6673249 MsG0780036340.01.T01:CDS 50.0%
! CGATTTGATGGACAGCAACC+AGG - Chr7:6673826-6673845 None:intergenic 50.0%
! CGTGTGTAAGACAAGTTGGC+TGG + Chr7:6673219-6673238 MsG0780036340.01.T01:CDS 50.0%
! GACAAGTTGGCTGGGATAAC+TGG + Chr7:6673228-6673247 MsG0780036340.01.T01:CDS 50.0%
!! ACCATGGGGACCTTTTGGAA+GGG + Chr7:6673169-6673188 MsG0780036340.01.T01:CDS 50.0%
!! AGGAGTGTCCGTGCTTCATT+CGG - Chr7:6670253-6670272 None:intergenic 50.0%
!! GAAGCACTGGCACTTAAGAC+TGG + Chr7:6672149-6672168 MsG0780036340.01.T01:intron 50.0%
!! GTTTCTAGGGCTCTTGTTCC+GGG + Chr7:6673023-6673042 MsG0780036340.01.T01:intron 50.0%
ACCCTTCCAAAAGGTCCCCA+TGG - Chr7:6673173-6673192 None:intergenic 55.0%
ACTGGGTCTCAAGGTGTGTC+CGG + Chr7:6672167-6672186 MsG0780036340.01.T01:intron 55.0%
ACTGTCATCCGTGTGTCTCC+TGG + Chr7:6669679-6669698 MsG0780036340.01.T01:CDS 55.0%
ATGAAGCACGGACACTCCTC+GGG + Chr7:6670254-6670273 MsG0780036340.01.T01:intron 55.0%
CCAGTTCCAATCACCCTAGC+AGG - Chr7:6670786-6670805 None:intergenic 55.0%
CCTGCTAGGGTGATTGGAAC+TGG + Chr7:6670783-6670802 MsG0780036340.01.T01:intron 55.0%
CTGGAGTTACCTGCCATCCA+AGG - Chr7:6671825-6671844 None:intergenic 55.0%
GAGACACACGGATGACAGTC+CGG - Chr7:6669678-6669697 None:intergenic 55.0%
GGAACTGGGACGTTTGGTTG+TGG + Chr7:6670798-6670817 MsG0780036340.01.T01:CDS 55.0%
TCTTGCTGGGTTGTGTCGTG+AGG + Chr7:6669750-6669769 MsG0780036340.01.T01:CDS 55.0%
TGAAGCACGGATACGGACAC+CGG - Chr7:6670382-6670401 None:intergenic 55.0%
TGACCCCTGCCAGAAAGAGA+AGG - Chr7:6671743-6671762 None:intergenic 55.0%
TGATGCCAGACCAACGCGTA+TGG - Chr7:6670473-6670492 None:intergenic 55.0%
TTGCAGCCTGCTAGGGTGAT+TGG + Chr7:6670777-6670796 MsG0780036340.01.T01:intron 55.0%
! ACAAGTGTCGTGTCCGACAC+CGG - Chr7:6670291-6670310 None:intergenic 55.0%
! GACCATGGGGACCTTTTGGA+AGG + Chr7:6673168-6673187 MsG0780036340.01.T01:CDS 55.0%
! GTAACCACATGTCTCGGTGC+CGG - Chr7:6672189-6672208 None:intergenic 55.0%
! TTCTCTTTCTGGCAGGGGTC+AGG + Chr7:6671742-6671761 MsG0780036340.01.T01:intron 55.0%
!! GCTTCATTCGGTGCAGTTGC+AGG - Chr7:6670241-6670260 None:intergenic 55.0%
!! TCATTCGGTGCAGTTGCAGG+CGG - Chr7:6670238-6670257 None:intergenic 55.0%
AGTCCGGCGAGAGTTGCCAA+GGG - Chr7:6669662-6669681 None:intergenic 60.0%
GCGAGAGTTGCCAAGGGGTA+CGG - Chr7:6669656-6669675 None:intergenic 60.0%
GTCAGTGTCCGTGTCGTGTC+CGG + Chr7:6670360-6670379 MsG0780036340.01.T01:intron 60.0%
TACCCCTTGGCAACTCTCGC+CGG + Chr7:6669656-6669675 MsG0780036340.01.T01:CDS 60.0%
TACGGACACCGGACACGACA+CGG - Chr7:6670371-6670390 None:intergenic 60.0%
! CAAGTGTCGTGTCCGACACC+GGG - Chr7:6670290-6670309 None:intergenic 60.0%
! GGACGACCATGGGGACCTTT+TGG + Chr7:6673164-6673183 MsG0780036340.01.T01:CDS 60.0%
! TTTCTGGCAGGGGTCAGGAC+AGG + Chr7:6671747-6671766 MsG0780036340.01.T01:intron 60.0%
CAGTCCGGCGAGAGTTGCCA+AGG - Chr7:6669663-6669682 None:intergenic 65.0%
GCAATCGACGCCGTACCCCT+TGG + Chr7:6669643-6669662 MsG0780036340.01.T01:CDS 65.0%
GCACGGACACTCCTCGGGTT+AGG + Chr7:6670259-6670278 MsG0780036340.01.T01:intron 65.0%
GGTTAGGCGTGTCCCGGTGT+CGG + Chr7:6670275-6670294 MsG0780036340.01.T01:intron 65.0%
GTCCGGCGAGAGTTGCCAAG+GGG - Chr7:6669661-6669680 None:intergenic 65.0%
! GTGTCCGGCACCGAGACATG+TGG + Chr7:6672182-6672201 MsG0780036340.01.T01:intron 65.0%
! TCCTCGGGTTAGGCGTGTCC+CGG + Chr7:6670269-6670288 MsG0780036340.01.T01:intron 65.0%
ACCGGGACACGCCTAACCCG+AGG - Chr7:6670273-6670292 None:intergenic 70.0%
GCAGGGGTCAGGACAGGCAG+TGG + Chr7:6671753-6671772 MsG0780036340.01.T01:intron 70.0%
Chromosome Type Strat End Strand Name
Chr7 gene 6669580 6674382 6669580 ID=MsG0780036340.01;Name=MsG0780036340.01
Chr7 mRNA 6669580 6674382 6669580 ID=MsG0780036340.01.T01;Parent=MsG0780036340.01;Name=MsG0780036340.01.T01;_AED=0.37;_eAED=0.42;_QI=0|0.71|0.62|1|0.85|0.75|8|358|351
Chr7 exon 6669580 6669866 6669580 ID=MsG0780036340.01.T01:exon:3598;Parent=MsG0780036340.01.T01
Chr7 exon 6670597 6670665 6670597 ID=MsG0780036340.01.T01:exon:3599;Parent=MsG0780036340.01.T01
Chr7 exon 6670791 6670887 6670791 ID=MsG0780036340.01.T01:exon:3600;Parent=MsG0780036340.01.T01
Chr7 exon 6671757 6671834 6671757 ID=MsG0780036340.01.T01:exon:3601;Parent=MsG0780036340.01.T01
Chr7 exon 6672362 6672549 6672362 ID=MsG0780036340.01.T01:exon:3602;Parent=MsG0780036340.01.T01
Chr7 exon 6673121 6673294 6673121 ID=MsG0780036340.01.T01:exon:3603;Parent=MsG0780036340.01.T01
Chr7 exon 6673813 6673974 6673813 ID=MsG0780036340.01.T01:exon:3604;Parent=MsG0780036340.01.T01
Chr7 exon 6674024 6674382 6674024 ID=MsG0780036340.01.T01:exon:3605;Parent=MsG0780036340.01.T01
Chr7 CDS 6669580 6669866 6669580 ID=MsG0780036340.01.T01:cds;Parent=MsG0780036340.01.T01
Chr7 CDS 6670597 6670665 6670597 ID=MsG0780036340.01.T01:cds;Parent=MsG0780036340.01.T01
Chr7 CDS 6670791 6670887 6670791 ID=MsG0780036340.01.T01:cds;Parent=MsG0780036340.01.T01
Chr7 CDS 6671757 6671834 6671757 ID=MsG0780036340.01.T01:cds;Parent=MsG0780036340.01.T01
Chr7 CDS 6672362 6672549 6672362 ID=MsG0780036340.01.T01:cds;Parent=MsG0780036340.01.T01
Chr7 CDS 6673121 6673294 6673121 ID=MsG0780036340.01.T01:cds;Parent=MsG0780036340.01.T01
Chr7 CDS 6673813 6673974 6673813 ID=MsG0780036340.01.T01:cds;Parent=MsG0780036340.01.T01
Chr7 CDS 6674024 6674024 6674024 ID=MsG0780036340.01.T01:cds;Parent=MsG0780036340.01.T01
Chr7 three_prime_UTR 6674025 6674382 6674025 ID=MsG0780036340.01.T01:three_prime_utr;Parent=MsG0780036340.01.T01
Gene Sequence

>MsG0780036340.01.T01

ATGGCAGCATGTGTATACACCGTTTCACAGAACGGAACCGGAGATTTTCAAACGGTGCAAGAAGCAATCGACGCCGTACCCCTTGGCAACTCTCGCCGGACTGTCATCCGTGTGTCTCCTGGAATCTATAAGCAGCCGGTGTATGTTCCTAAGACGAAGAATTTCATCACTCTTGCTGGGTTGTGTCGTGAGGATACTGTGCTTACTTGGAATAATACTGCTACTAAGATTGATCATCATCAAGTATGTGCTCATTTTCTTTTTGTTATGTTAATTTGGGGTAATGGGTTTATGCTGTCCTACAATTTGAAGACCAATTTGGGTATTACTCGATGTTTTGTTCATTTGGGTAATGGGGTGATTGGAACTGGGACGTTTGGTTGTGGAAGTACCATTGTGGAAGGGGAGGACTTTATTGCTGAGAATATAACTTTTGAGAACTCTGCACCTGAGGGGTCAGGACAGGCAGTGGCAATTAGAGTAACTGCAGATCGATGTGCCTTCTACAATTGTAGGTTCCTTGGATGGCAGGACACACTGTATTTACACTACGGTAAACAATATTTGAAAGATTGCTATATTGAAGGAAGCGTTGATTTCATCTTTGGAAATAGCACCGCTCTATTGGAGAACTGTCATATTCACTGCAAGTCTGCAGGGTTCATAACCGCACAGAGTAGAAAATCATCGCAAGAAGCAACTGGTTATGTATTCTTGAGATGTGTTATAACAGGTAATGGAGGACATTCATATGCATATCTTGGACGACCATGGGGACCTTTTGGAAGGGTTGTCTTTGCATACACTTACATGGATCCGTGTGTAAGACAAGTTGGCTGGGATAACTGGGGGAAAGTAGAGAATGAGAGGAGTGCTTGCTTTTATGAATACAGGTGTTTTGGACCTGGTTGCTGTCCATCAAATCGAGCAAATTGGTGTAGAGAACTGGTGGATGAAGAAGCAGAGCAGTTCATCATGCATCCTTTCATCGATCCAGAACCAGATAGATCTTGGCTTGCTCAAAGAATGGGTTTGAGGATTCCATATTCTGCGTAG

Protein sequence

>MsG0780036340.01.T01

MAACVYTVSQNGTGDFQTVQEAIDAVPLGNSRRTVIRVSPGIYKQPVYVPKTKNFITLAGLCREDTVLTWNNTATKIDHHQVCAHFLFVMLIWGNGFMLSYNLKTNLGITRCFVHLGNGVIGTGTFGCGSTIVEGEDFIAENITFENSAPEGSGQAVAIRVTADRCAFYNCRFLGWQDTLYLHYGKQYLKDCYIEGSVDFIFGNSTALLENCHIHCKSAGFITAQSRKSSQEATGYVFLRCVITGNGGHSYAYLGRPWGPFGRVVFAYTYMDPCVRQVGWDNWGKVENERSACFYEYRCFGPGCCPSNRANWCRELVDEEAEQFIMHPFIDPEPDRSWLAQRMGLRIPYSA*