AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480022076.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480022076.01.T01 MTR_4g081950 78.095 210 43 2 18 225 46 254 1.63e-113 328
MsG0480022076.01.T01 MTR_5g041700 72.115 208 55 2 20 225 12 218 1.85e-103 301
MsG0480022076.01.T01 MTR_3g435430 68.932 206 61 2 22 225 14 218 9.50e-97 285
MsG0480022076.01.T01 MTR_3g094040 68.720 211 61 3 19 225 15 224 2.70e-95 281
MsG0480022076.01.T01 MTR_3g094060 66.820 217 67 3 13 225 9 224 2.76e-95 281
MsG0480022076.01.T01 MTR_5g075320 69.388 196 57 2 32 225 28 222 1.40e-93 277
MsG0480022076.01.T01 MTR_3g466790 69.898 196 56 2 32 225 31 225 2.98e-87 261
MsG0480022076.01.T01 MTR_3g466760 69.388 196 57 2 32 225 37 231 3.39e-86 258
MsG0480022076.01.T01 MTR_7g011060 67.876 193 51 3 33 223 26 209 4.54e-86 257
MsG0480022076.01.T01 MTR_5g079950 64.467 197 65 3 33 225 33 228 9.27e-84 252
MsG0480022076.01.T01 MTR_7g061720 64.467 197 65 3 33 225 32 227 9.47e-84 252
MsG0480022076.01.T01 MTR_2g097030 64.824 199 61 4 33 225 34 229 1.10e-83 252
MsG0480022076.01.T01 MTR_4g063975 76.351 148 33 1 33 178 32 179 3.37e-80 243
MsG0480022076.01.T01 MTR_1g026020 60.804 199 72 4 32 225 28 225 7.55e-80 242
MsG0480022076.01.T01 MTR_6g012520 70.256 195 47 3 31 223 26 211 5.93e-79 239
MsG0480022076.01.T01 MTR_1g085460 51.653 242 97 5 33 268 30 257 5.59e-76 232
MsG0480022076.01.T01 MTR_7g111010 59.709 206 66 6 33 227 27 226 2.33e-75 230
MsG0480022076.01.T01 MTR_7g110990 59.709 206 66 6 33 227 12 211 5.74e-75 229
MsG0480022076.01.T01 MTR_4g124340 48.529 204 97 4 27 225 55 255 2.30e-63 201
MsG0480022076.01.T01 MTR_7g013120 46.087 230 109 6 33 260 29 245 6.20e-62 196
MsG0480022076.01.T01 MTR_5g011210 50.000 204 82 4 33 225 37 231 1.25e-58 188
MsG0480022076.01.T01 MTR_8g464350 58.784 148 57 2 33 178 31 176 1.61e-58 187
MsG0480022076.01.T01 MTR_8g058990 57.432 148 59 2 33 178 30 175 1.52e-57 185
MsG0480022076.01.T01 MTR_7g013150 47.716 197 96 4 33 225 30 223 2.31e-57 184
MsG0480022076.01.T01 MTR_4g102450 58.784 148 56 3 33 177 36 181 2.31e-55 179
MsG0480022076.01.T01 MTR_7g013140 56.757 148 60 2 33 178 28 173 3.61e-55 179
MsG0480022076.01.T01 MTR_5g076950 53.741 147 67 1 33 178 41 187 6.62e-50 166
MsG0480022076.01.T01 MTR_0040s0140 50.000 148 72 1 33 178 32 179 7.36e-49 162
MsG0480022076.01.T01 MTR_2g090255 47.973 148 75 1 33 178 28 175 5.03e-46 155
MsG0480022076.01.T01 MTR_3g064510 50.323 155 68 5 33 178 53 207 1.51e-41 145
MsG0480022076.01.T01 MTR_0008s0120 39.041 146 33 3 33 178 32 121 1.58e-22 92.8
MsG0480022076.01.T01 MTR_2g090270 30.822 146 80 5 33 169 35 168 5.54e-14 70.5
MsG0480022076.01.T01 MTR_2g090265 30.822 146 80 5 33 169 33 166 3.23e-13 68.2
MsG0480022076.01.T01 MTR_0122s0020 31.507 146 79 5 33 169 41 174 4.57e-13 67.0
MsG0480022076.01.T01 MTR_4g098930 31.902 163 77 7 11 158 3 146 6.15e-13 67.4
MsG0480022076.01.T01 MTR_0122s0020 31.507 146 79 5 33 169 41 174 7.58e-13 67.4
MsG0480022076.01.T01 MTR_0809s0010 28.289 152 85 6 27 169 41 177 1.30e-12 66.6
MsG0480022076.01.T01 MTR_0118s0070 31.169 154 83 6 38 179 53 195 4.67e-11 62.4
MsG0480022076.01.T01 MTR_4g099370 26.897 145 98 3 18 162 13 149 5.36e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480022076.01.T01 AT1G69530 72.821 195 52 1 32 225 26 220 7.57e-99 291
MsG0480022076.01.T01 AT1G69530 72.821 195 52 1 32 225 26 220 1.84e-98 289
MsG0480022076.01.T01 AT1G69530 72.821 195 52 1 32 225 26 220 1.84e-98 289
MsG0480022076.01.T01 AT2G03090 70.918 196 54 2 32 225 29 223 3.51e-96 283
MsG0480022076.01.T01 AT1G69530 88.435 147 17 0 32 178 26 172 3.30e-95 281
MsG0480022076.01.T01 AT1G69530 88.435 147 17 0 32 178 26 172 8.61e-95 279
MsG0480022076.01.T01 AT2G40610 61.290 217 75 3 17 225 9 224 2.52e-89 266
MsG0480022076.01.T01 AT5G56320 61.111 216 74 3 19 225 8 222 2.81e-89 266
MsG0480022076.01.T01 AT5G56320 61.111 216 74 3 19 225 8 222 2.81e-89 266
MsG0480022076.01.T01 AT5G56320 61.111 216 74 3 19 225 8 222 1.31e-88 266
MsG0480022076.01.T01 AT1G26770 73.469 196 49 2 32 225 25 219 3.68e-88 263
MsG0480022076.01.T01 AT1G26770 73.469 196 49 2 32 225 35 229 5.46e-88 263
MsG0480022076.01.T01 AT2G39700 65.482 197 63 3 33 225 31 226 4.24e-87 260
MsG0480022076.01.T01 AT5G02260 65.152 198 64 3 33 226 32 228 3.01e-85 256
MsG0480022076.01.T01 AT3G55500 63.452 197 67 3 33 225 34 229 2.07e-84 254
MsG0480022076.01.T01 AT5G05290 59.259 216 77 3 20 225 12 226 3.23e-84 253
MsG0480022076.01.T01 AT2G37640 65.152 198 62 3 33 225 36 231 5.63e-84 253
MsG0480022076.01.T01 AT2G28950 64.000 200 63 4 32 225 30 226 1.66e-83 251
MsG0480022076.01.T01 AT1G20190 54.959 242 90 5 32 268 25 252 1.31e-78 239
MsG0480022076.01.T01 AT4G01630 60.697 201 74 3 32 227 27 227 1.90e-78 238
MsG0480022076.01.T01 AT3G29030 61.140 193 65 3 33 223 38 222 5.82e-75 229
MsG0480022076.01.T01 AT2G37640 61.878 181 62 3 50 225 28 206 2.24e-70 217
MsG0480022076.01.T01 AT5G39280 59.589 146 57 1 33 178 54 197 3.82e-62 197
MsG0480022076.01.T01 AT5G39300 55.625 160 69 1 19 178 41 198 1.28e-61 196
MsG0480022076.01.T01 AT5G39310 60.544 147 56 1 32 178 89 233 1.84e-61 197
MsG0480022076.01.T01 AT5G39270 57.534 146 60 1 33 178 58 201 1.46e-57 186
MsG0480022076.01.T01 AT5G39290 57.534 146 60 1 33 178 58 201 1.61e-57 186
MsG0480022076.01.T01 AT1G62980 48.731 197 95 4 33 225 31 225 5.49e-56 181
MsG0480022076.01.T01 AT1G12560 47.959 196 97 4 33 225 37 230 1.44e-55 180
MsG0480022076.01.T01 AT1G20190 49.515 206 85 5 68 268 2 193 6.20e-55 176
MsG0480022076.01.T01 AT3G15370 47.549 204 94 7 32 228 26 223 5.45e-53 173
MsG0480022076.01.T01 AT3G15370 41.453 234 94 8 32 228 26 253 1.65e-46 157
MsG0480022076.01.T01 AT3G03220 49.660 147 73 1 33 178 40 186 3.97e-46 156
MsG0480022076.01.T01 AT4G38210 48.667 150 73 2 33 178 28 177 3.68e-45 153
MsG0480022076.01.T01 AT5G39260 40.517 232 112 5 33 260 45 254 4.42e-45 153
MsG0480022076.01.T01 AT4G28250 34.899 149 76 5 33 172 36 172 2.70e-17 80.1
MsG0480022076.01.T01 AT4G28250 35.115 131 65 4 33 155 36 154 2.96e-15 73.2
MsG0480022076.01.T01 AT4G28250 35.115 131 65 4 33 155 36 154 3.73e-15 73.2
MsG0480022076.01.T01 AT2G20750 31.544 149 84 5 33 172 40 179 1.05e-14 72.0
MsG0480022076.01.T01 AT4G28250 35.115 131 65 4 33 155 36 154 1.66e-14 72.0
MsG0480022076.01.T01 AT2G20750 31.544 149 84 5 33 172 40 179 2.02e-14 72.0
MsG0480022076.01.T01 AT3G60570 30.882 136 73 4 33 160 34 156 1.08e-12 67.0
MsG0480022076.01.T01 AT2G45110 31.176 170 87 6 8 162 6 160 2.35e-12 65.9

Find 102 sgRNAs with CRISPR-Local

Find 236 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAAAATGGCCCTTCAATTTA+TGG 0.080320 4:-67806687 MsG0480022076.01.T01:three_prime_UTR
CACCCGCTATATTTAGTATT+AGG 0.190674 4:-67806514 MsG0480022076.01.T01:three_prime_UTR
ATGGTCAAAGTTTGTCTTTA+AGG 0.194727 4:-67806977 MsG0480022076.01.T01:CDS
AATGCACATGCCACCTTCTA+TGG 0.202737 4:-67807765 MsG0480022076.01.T01:CDS
GTCAGAACTGGGGACAAAAT+TGG 0.214514 4:-67807020 MsG0480022076.01.T01:CDS
CCCTTCAATTTATGGCTCTT+TGG 0.234819 4:-67806679 MsG0480022076.01.T01:three_prime_UTR
GCTCCAGCTGGATGGTCTTT+TGG 0.250334 4:-67806913 MsG0480022076.01.T01:CDS
TTGTGGTTGAACTACTAAAT+TGG 0.259563 4:-67806556 MsG0480022076.01.T01:three_prime_UTR
CACCAACCACCTTGATTGTT+TGG 0.269349 4:+67807381 None:intergenic
TCCAGCTGGAGCAACATTAT+TGG 0.273928 4:+67806924 None:intergenic
GACCATAGATGGTGCCTTCC+TGG 0.298042 4:-67807453 MsG0480022076.01.T01:CDS
GTAGGTGGGGCTTGTGGATA+TGG 0.300951 4:-67807582 MsG0480022076.01.T01:intron
AGTATTTCTAAACTTGAAAC+TGG 0.309026 4:+67806843 None:intergenic
TTCCATACCCTTGACTATAA+AGG 0.310459 4:+67807556 None:intergenic
GGCTTACATTGGCTTGCTTT+TGG 0.310735 4:-67807839 MsG0480022076.01.T01:CDS
ACCCGCTATATTTAGTATTA+GGG 0.318190 4:-67806513 MsG0480022076.01.T01:three_prime_UTR
GGTATAAGGTTCACTATTAA+TGG 0.324866 4:-67807140 MsG0480022076.01.T01:CDS
AATGAAGGGCATATTTAAAA+TGG 0.327570 4:-67806702 MsG0480022076.01.T01:three_prime_UTR
GTGGCTCTTGCTATGAAATT+AGG 0.339101 4:-67807485 MsG0480022076.01.T01:CDS
CTTTGGTTATTGTGGTGTTT+CGG 0.371280 4:-67806662 MsG0480022076.01.T01:three_prime_UTR
TAAATTGGAGGAGGTGGAAA+TGG 0.377719 4:-67806541 MsG0480022076.01.T01:three_prime_UTR
TGGCTGGGTAAGGTATGTTT+TGG 0.381554 4:-67806418 MsG0480022076.01.T01:three_prime_UTR
TCCTCTGTTTATGCTATGGT+GGG 0.389559 4:-67807796 MsG0480022076.01.T01:CDS
TCCAATAATGTTGCTCCAGC+TGG 0.392823 4:-67806925 MsG0480022076.01.T01:CDS
CCCAGCCAAGGCTGATTACA+AGG 0.393740 4:+67806433 None:intergenic
TTGGATATCTATGTCAGAAC+TGG 0.399307 4:-67807032 MsG0480022076.01.T01:CDS
AACCAGGAAGGCACCATCTA+TGG 0.400538 4:+67807451 None:intergenic
TTGTTTGGTAAGGCATTGTT+TGG 0.404496 4:+67807396 None:intergenic
TCCTTGTAATCAGCCTTGGC+TGG 0.421343 4:-67806434 MsG0480022076.01.T01:three_prime_UTR
CTCAAATCCTCTAGAGCATA+TGG 0.422412 4:-67806873 MsG0480022076.01.T01:CDS
TTTCACAAACGTTGGTGTGC+TGG 0.424152 4:-67807094 MsG0480022076.01.T01:CDS
TCAGAACTGGGGACAAAATT+GGG 0.424330 4:-67807019 MsG0480022076.01.T01:CDS
AACTACTAAATTGGAGGAGG+TGG 0.430327 4:-67806547 MsG0480022076.01.T01:three_prime_UTR
TATGGAGGAAGTGATGCTTC+AGG 0.438776 4:-67807747 MsG0480022076.01.T01:CDS
AGCATCACTTCCTCCATAGA+AGG 0.449496 4:+67807752 None:intergenic
CTCCTCTGTTTATGCTATGG+TGG 0.462850 4:-67807797 MsG0480022076.01.T01:CDS
CTAATCCTTGTAATCAGCCT+TGG 0.470855 4:-67806438 MsG0480022076.01.T01:three_prime_UTR
TTATGGCTCTTTGGTTATTG+TGG 0.473038 4:-67806670 MsG0480022076.01.T01:three_prime_UTR
GTTCTCCTCTGTTTATGCTA+TGG 0.473879 4:-67807800 MsG0480022076.01.T01:CDS
AGGGTGTCATGCAGAAGAAA+GGG 0.474428 4:-67807164 MsG0480022076.01.T01:CDS
TAATCAGCCTTGGCTGGGTA+AGG 0.486468 4:-67806428 MsG0480022076.01.T01:three_prime_UTR
TAGTACCTCAATAGTATACT+AGG 0.491481 4:-67806783 MsG0480022076.01.T01:three_prime_UTR
ACCAAAGAGCCATAAATTGA+AGG 0.498650 4:+67806678 None:intergenic
TAGGGTGTCATGCAGAAGAA+AGG 0.498929 4:-67807165 MsG0480022076.01.T01:CDS
TGTTTATGCTATGGTGGGGA+TGG 0.502127 4:-67807791 MsG0480022076.01.T01:CDS
TGGTTGAACTACTAAATTGG+AGG 0.505389 4:-67806553 MsG0480022076.01.T01:three_prime_UTR
CAGAGCAACAATTATCTCAA+TGG 0.508519 4:-67806996 MsG0480022076.01.T01:CDS
AACCTTTATAGTCAAGGGTA+TGG 0.513145 4:-67807558 MsG0480022076.01.T01:CDS
CGTATTGCTCAATACAAAGC+TGG 0.513556 4:-67807312 MsG0480022076.01.T01:CDS
AGTGATGCTTCAGGAACAAT+GGG 0.514794 4:-67807738 MsG0480022076.01.T01:intron
AATATCCTAGTATACTATTG+AGG 0.517752 4:+67806778 None:intergenic
ACCACCTTGATTGTTTGGTA+AGG 0.522218 4:+67807386 None:intergenic
TTTGGTAAGGCATTGTTTGG+AGG 0.522270 4:+67807399 None:intergenic
GTTGAGCAAGATCAAAATGT+TGG 0.527634 4:+67807346 None:intergenic
ACCTACCTTCTAAAATCTAC+AGG 0.533353 4:+67807282 None:intergenic
AAACAGGAAATGGCTTACAT+TGG 0.533906 4:-67807850 MsG0480022076.01.T01:intron
TACATGCTGCATCCATCAAA+GGG 0.543754 4:-67807066 MsG0480022076.01.T01:CDS
TATGGTAACCTTTATAGTCA+AGG 0.546440 4:-67807564 MsG0480022076.01.T01:CDS
TTCAACAATGGCTTAAGCTG+TGG 0.546607 4:-67807504 MsG0480022076.01.T01:CDS
GATCAAAATGTTGGAGAGGA+GGG 0.550651 4:+67807355 None:intergenic
GTTTGGAGGACAGAAATTTG+TGG 0.554497 4:+67807413 None:intergenic
TTTAAGGTTACAACTAGTGA+TGG 0.555680 4:-67806961 MsG0480022076.01.T01:CDS
CCAAAGAGCCATAAATTGAA+GGG 0.556186 4:+67806679 None:intergenic
AAGTGATGCTTCAGGAACAA+TGG 0.556486 4:-67807739 MsG0480022076.01.T01:CDS
CTAATATAGATGTTAGCAGA+AGG 0.562363 4:-67806598 MsG0480022076.01.T01:three_prime_UTR
CCTTGTAATCAGCCTTGGCT+GGG 0.566017 4:-67806433 MsG0480022076.01.T01:three_prime_UTR
CTTAGTTCTTTCACAAACGT+TGG 0.567179 4:-67807102 MsG0480022076.01.T01:CDS
GTACATGCTGCATCCATCAA+AGG 0.567778 4:-67807067 MsG0480022076.01.T01:CDS
TGTGGGATTCAGTAGATTCA+CGG 0.568259 4:-67809576 MsG0480022076.01.T01:intron
TGACCAAAAGACCATCCAGC+TGG 0.568697 4:+67806910 None:intergenic
TGGATATCTATGTCAGAACT+GGG 0.583130 4:-67807031 MsG0480022076.01.T01:CDS
AGATCAAAATGTTGGAGAGG+AGG 0.586254 4:+67807354 None:intergenic
AATTTGACCATATGCTCTAG+AGG 0.586262 4:+67806866 None:intergenic
ACCCTAATACTAAATATAGC+GGG 0.586746 4:+67806512 None:intergenic
ATGGTAACCTTTATAGTCAA+GGG 0.589746 4:-67807563 MsG0480022076.01.T01:CDS
ATAATGTTGCTCCAGCTGGA+TGG 0.590574 4:-67806921 MsG0480022076.01.T01:CDS
GTGCCTTCCTGGTTCCATTG+TGG 0.591922 4:-67807442 MsG0480022076.01.T01:CDS
TACCAAACAATCAAGGTGGT+TGG 0.598522 4:-67807383 MsG0480022076.01.T01:CDS
GCAGTGACCACAATGGAACC+AGG 0.602351 4:+67807435 None:intergenic
GGGTGTCATGCAGAAGAAAG+GGG 0.608021 4:-67807163 MsG0480022076.01.T01:CDS
ATATTAAATAGTATGCTGCT+AGG 0.609090 4:-67806760 MsG0480022076.01.T01:three_prime_UTR
AATGCCTTACCAAACAATCA+AGG 0.612141 4:-67807390 MsG0480022076.01.T01:CDS
ATATTAGCAGAGCAGCAGAA+TGG 0.618183 4:+67806614 None:intergenic
CCTCTGTTTATGCTATGGTG+GGG 0.621855 4:-67807795 MsG0480022076.01.T01:CDS
GAGGATTTGAGCACCAGTGT+AGG 0.625146 4:+67806885 None:intergenic
GGTGTGCTAATGACCATAGA+TGG 0.625411 4:-67807464 MsG0480022076.01.T01:CDS
GGTGTCATGCAGAAGAAAGG+GGG 0.628611 4:-67807162 MsG0480022076.01.T01:CDS
AAACATACCTTACCCAGCCA+AGG 0.637920 4:+67806421 None:intergenic
TTGAACTACTAAATTGGAGG+AGG 0.638601 4:-67806550 MsG0480022076.01.T01:three_prime_UTR
TAATATAGATGTTAGCAGAA+GGG 0.640329 4:-67806597 MsG0480022076.01.T01:three_prime_UTR
GCAAGATCAAAATGTTGGAG+AGG 0.641783 4:+67807351 None:intergenic
ATCACTTCCTCCATAGAAGG+TGG 0.643748 4:+67807755 None:intergenic
GCACATGCCACCTTCTATGG+AGG 0.644186 4:-67807762 MsG0480022076.01.T01:CDS
TACCCTAATACTAAATATAG+CGG 0.647079 4:+67806511 None:intergenic
GAAAAGTGCTGTACTCAAAG+CGG 0.652141 4:+67807524 None:intergenic
CTAATACTAAATATAGCGGG+TGG 0.673805 4:+67806515 None:intergenic
TGACCACAATGGAACCAGGA+AGG 0.676921 4:+67807439 None:intergenic
ATTTGTGGCAGTGACCACAA+TGG 0.706109 4:+67807428 None:intergenic
CCCCACCATAGCATAAACAG+AGG 0.707603 4:+67807795 None:intergenic
GTGTCATGCAGAAGAAAGGG+GGG 0.710137 4:-67807161 MsG0480022076.01.T01:CDS
GCCTTACCAAACAATCAAGG+TGG 0.713350 4:-67807387 MsG0480022076.01.T01:CDS
GGATATCTATGTCAGAACTG+GGG 0.752968 4:-67807030 MsG0480022076.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATACAAAATGATTATTATT+GGG + Chr4:67807274-67807293 None:intergenic 10.0%
!!! ATTTTCAATTTTTTTGTATT+TGG - Chr4:67808708-67808727 MsG0480022076.01.T01:intron 10.0%
!!! TGGATTTTTATTTTATTTTT+TGG - Chr4:67807035-67807054 MsG0480022076.01.T01:CDS 10.0%
!!! TTTTTATTATCTTTATGTTT+TGG - Chr4:67807072-67807091 MsG0480022076.01.T01:CDS 10.0%
!! CAAATAAATAAGCAAAATAT+TGG - Chr4:67806416-67806435 MsG0480022076.01.T01:three_prime_UTR 15.0%
!! CAATACAAAATGATTATTAT+TGG + Chr4:67807275-67807294 None:intergenic 15.0%
!! CATTTCAAATTTCAAATAAT+TGG + Chr4:67807711-67807730 None:intergenic 15.0%
!! TAAGAATAAGAAATAAAAGA+TGG - Chr4:67807435-67807454 MsG0480022076.01.T01:CDS 15.0%
!!! AGAAAAAAAATCATGAATTT+TGG + Chr4:67807132-67807151 None:intergenic 15.0%
!! AATAAGAAATAAAAGATGGT+GGG - Chr4:67807439-67807458 MsG0480022076.01.T01:CDS 20.0%
!! ATATAAAAAATGTAGATGCT+TGG + Chr4:67808686-67808705 None:intergenic 20.0%
!! CAAATTTCAAATAATTGGTT+TGG + Chr4:67807706-67807725 None:intergenic 20.0%
!! TAAATAAGCAAAATATTGGA+TGG - Chr4:67806420-67806439 MsG0480022076.01.T01:three_prime_UTR 20.0%
!! TCAAATGAACATTAATATTG+AGG + Chr4:67806470-67806489 None:intergenic 20.0%
!!! ACTAATTTGTGTTTTTATTG+CGG - Chr4:67808736-67808755 MsG0480022076.01.T01:intron 20.0%
!!! ACTTTTTCTTTATATCTTTG+TGG - Chr4:67809361-67809380 MsG0480022076.01.T01:intron 20.0%
!!! ATCCTTTTAGTTTTTCATTT+TGG - Chr4:67809448-67809467 MsG0480022076.01.T01:intron 20.0%
!!! ATTTTTTTTACCATTGTACA+TGG - Chr4:67807580-67807599 MsG0480022076.01.T01:CDS 20.0%
!!! CACATTTTAGTACATAAATT+TGG + Chr4:67808024-67808043 None:intergenic 20.0%
!!! TAGTGGTTTTTATTGAAAAA+TGG + Chr4:67808228-67808247 None:intergenic 20.0%
!!! TCCTTTTAGTTTTTCATTTT+GGG - Chr4:67809449-67809468 MsG0480022076.01.T01:intron 20.0%
! AATATCCTAGTATACTATTG+AGG + Chr4:67809159-67809178 None:intergenic 25.0%
! ATAAGAAATAAAAGATGGTG+GGG - Chr4:67807440-67807459 MsG0480022076.01.T01:CDS 25.0%
! ATATTAAATAGTATGCTGCT+AGG - Chr4:67809174-67809193 MsG0480022076.01.T01:intron 25.0%
! ATGTACTAAAATGTGTTACA+AGG - Chr4:67808029-67808048 MsG0480022076.01.T01:intron 25.0%
! CAATATGGATACTTATTTAG+AGG - Chr4:67806699-67806718 MsG0480022076.01.T01:three_prime_UTR 25.0%
! CTTATTTATTTGAGAGTAGA+CGG + Chr4:67806408-67806427 None:intergenic 25.0%
! GAATAAGAAATAAAAGATGG+TGG - Chr4:67807438-67807457 MsG0480022076.01.T01:CDS 25.0%
! GTTAGTTAAAATTGTTAGAG+TGG - Chr4:67807797-67807816 MsG0480022076.01.T01:CDS 25.0%
! TAATATAGATGTTAGCAGAA+GGG - Chr4:67809337-67809356 MsG0480022076.01.T01:intron 25.0%
! TACCCTAATACTAAATATAG+CGG + Chr4:67809426-67809445 None:intergenic 25.0%
! TATGTAGTTGCATAAAATAC+TGG + Chr4:67806569-67806588 None:intergenic 25.0%
! TCCCAAAATGAAAAACTAAA+AGG + Chr4:67809453-67809472 None:intergenic 25.0%
! TCTGTCAATGTTTATCAATA+TGG - Chr4:67806684-67806703 MsG0480022076.01.T01:three_prime_UTR 25.0%
! TTCAAGGTCTATAAATTAAG+TGG - Chr4:67807850-67807869 MsG0480022076.01.T01:intron 25.0%
!! AATGAAGGGCATATTTAAAA+TGG - Chr4:67809232-67809251 MsG0480022076.01.T01:intron 25.0%
!! ACTCTAACCTGTATATATTT+TGG - Chr4:67807749-67807768 MsG0480022076.01.T01:CDS 25.0%
!! AGTATTTCTAAACTTGAAAC+TGG + Chr4:67809094-67809113 None:intergenic 25.0%
!! ATTTTAAATATGCCCTTCAT+TGG + Chr4:67809233-67809252 None:intergenic 25.0%
!! GAAATTACTTTGATAGTCAA+AGG + Chr4:67807947-67807966 None:intergenic 25.0%
!! TCAAAACTTTATTTCAGTAG+TGG + Chr4:67808245-67808264 None:intergenic 25.0%
!!! TATTTTTTGGAAGAGTTGTT+TGG - Chr4:67807048-67807067 MsG0480022076.01.T01:CDS 25.0%
!!! TTTGTTTTGTACATTGAAAC+AGG - Chr4:67808068-67808087 MsG0480022076.01.T01:intron 25.0%
!!! TTTGTTTTTGGTTGTTTTAG+AGG - Chr4:67809207-67809226 MsG0480022076.01.T01:intron 25.0%
AAACAACAAAGTCAGTGAAA+TGG + Chr4:67808327-67808346 None:intergenic 30.0%
AACAACAAAGTCAGTGAAAT+GGG + Chr4:67808326-67808345 None:intergenic 30.0%
AACTTGTCTCATAAAATTCG+AGG + Chr4:67806599-67806618 None:intergenic 30.0%
AATTGAAAAAGTGGATGTTG+AGG - Chr4:67807549-67807568 MsG0480022076.01.T01:CDS 30.0%
ACCCGCTATATTTAGTATTA+GGG - Chr4:67809421-67809440 MsG0480022076.01.T01:intron 30.0%
ACCCTAATACTAAATATAGC+GGG + Chr4:67809425-67809444 None:intergenic 30.0%
AGAGAAACGAATGGATAAAA+GGG - Chr4:67806983-67807002 MsG0480022076.01.T01:CDS 30.0%
AGATAAGAGAGTGAAAAACT+TGG + Chr4:67807201-67807220 None:intergenic 30.0%
ATATATACAGGTTAGAGTAG+AGG + Chr4:67807747-67807766 None:intergenic 30.0%
ATGGTAACCTTTATAGTCAA+GGG - Chr4:67808371-67808390 MsG0480022076.01.T01:intron 30.0%
ATGGTCAAAGTTTGTCTTTA+AGG - Chr4:67808957-67808976 MsG0480022076.01.T01:intron 30.0%
ATTCAATTTATCCACTCCAA+TGG + Chr4:67807487-67807506 None:intergenic 30.0%
ATTGAAAAAGTGGATGTTGA+GGG - Chr4:67807550-67807569 MsG0480022076.01.T01:CDS 30.0%
ATTGGAGTGGATAAATTGAA+TGG - Chr4:67807486-67807505 MsG0480022076.01.T01:CDS 30.0%
CTAATATAGATGTTAGCAGA+AGG - Chr4:67809336-67809355 MsG0480022076.01.T01:intron 30.0%
GGTATAAGGTTCACTATTAA+TGG - Chr4:67808794-67808813 MsG0480022076.01.T01:intron 30.0%
GTGTTGAATGATAAAACCAT+TGG - Chr4:67807468-67807487 MsG0480022076.01.T01:CDS 30.0%
TAAAATGGCCCTTCAATTTA+TGG - Chr4:67809247-67809266 MsG0480022076.01.T01:intron 30.0%
TAGTACCTCAATAGTATACT+AGG - Chr4:67809151-67809170 MsG0480022076.01.T01:intron 30.0%
TATGGTAACCTTTATAGTCA+AGG - Chr4:67808370-67808389 MsG0480022076.01.T01:intron 30.0%
TTAAGAGAGAGAAAATGATG+TGG - Chr4:67807517-67807536 MsG0480022076.01.T01:CDS 30.0%
TTGGAGTGGATAAATTGAAT+GGG - Chr4:67807487-67807506 MsG0480022076.01.T01:CDS 30.0%
TTGTACATTGAAACAGGAAA+TGG - Chr4:67808074-67808093 MsG0480022076.01.T01:intron 30.0%
TTGTGGTTGAACTACTAAAT+TGG - Chr4:67809378-67809397 MsG0480022076.01.T01:intron 30.0%
TTTCTCTACAAATAGAGACT+TGG - Chr4:67807147-67807166 MsG0480022076.01.T01:CDS 30.0%
! AGTGTTGGAAATTGAAAAAG+TGG - Chr4:67807540-67807559 MsG0480022076.01.T01:CDS 30.0%
! TTGTTCCTGTAGATTTTAGA+AGG - Chr4:67808647-67808666 MsG0480022076.01.T01:intron 30.0%
! TTTAAGGTTACAACTAGTGA+TGG - Chr4:67808973-67808992 MsG0480022076.01.T01:intron 30.0%
!! GGAAAAAATGGGTTTGTTTT+TGG - Chr4:67809195-67809214 MsG0480022076.01.T01:intron 30.0%
!! GTTTAGACTTGTTGAATGAT+TGG - Chr4:67806803-67806822 MsG0480022076.01.T01:CDS 30.0%
!!! AAGGTATGTTTTGGTTGTAT+TGG - Chr4:67809525-67809544 MsG0480022076.01.T01:intron 30.0%
!!! AGGTATGTTTTGGTTGTATT+GGG - Chr4:67809526-67809545 MsG0480022076.01.T01:intron 30.0%
!!! GACTTTGTTGTTTTTTGTGT+AGG - Chr4:67808334-67808353 MsG0480022076.01.T01:intron 30.0%
!!! TTGTTGTTTTTTGTGTAGGT+GGG - Chr4:67808338-67808357 MsG0480022076.01.T01:intron 30.0%
!!! TTTGTTGTTTTTTGTGTAGG+TGG - Chr4:67808337-67808356 MsG0480022076.01.T01:intron 30.0%
AAACAGGAAATGGCTTACAT+TGG - Chr4:67808084-67808103 MsG0480022076.01.T01:intron 35.0%
AACCTTTATAGTCAAGGGTA+TGG - Chr4:67808376-67808395 MsG0480022076.01.T01:intron 35.0%
AATGCCTTACCAAACAATCA+AGG - Chr4:67808544-67808563 MsG0480022076.01.T01:intron 35.0%
AATTTGACCATATGCTCTAG+AGG + Chr4:67809071-67809090 None:intergenic 35.0%
ACCAAAGAGCCATAAATTGA+AGG + Chr4:67809259-67809278 None:intergenic 35.0%
AGAAACGAATGGATAAAAGG+GGG - Chr4:67806985-67807004 MsG0480022076.01.T01:CDS 35.0%
AGTATGCTGCTAGGAAAAAA+TGG - Chr4:67809183-67809202 MsG0480022076.01.T01:intron 35.0%
ATGAAGGAGCAATGTGAAAA+AGG + Chr4:67807969-67807988 None:intergenic 35.0%
CACCCGCTATATTTAGTATT+AGG - Chr4:67809420-67809439 MsG0480022076.01.T01:intron 35.0%
CAGAGCAACAATTATCTCAA+TGG - Chr4:67808938-67808957 MsG0480022076.01.T01:intron 35.0%
CCAAAGAGCCATAAATTGAA+GGG + Chr4:67809258-67809277 None:intergenic 35.0%
CCTTGGACCAAAATATATAC+AGG + Chr4:67807759-67807778 None:intergenic 35.0%
CTTGCTTATTGAAGATGAGT+TGG - Chr4:67806828-67806847 MsG0480022076.01.T01:CDS 35.0%
CTTTGGTTATTGTGGTGTTT+CGG - Chr4:67809272-67809291 MsG0480022076.01.T01:intron 35.0%
GAACTTTAGCATTCAGATGA+AGG + Chr4:67807985-67808004 None:intergenic 35.0%
GAATGATAAAACCATTGGAG+TGG - Chr4:67807473-67807492 MsG0480022076.01.T01:CDS 35.0%
GAGAAACGAATGGATAAAAG+GGG - Chr4:67806984-67807003 MsG0480022076.01.T01:CDS 35.0%
GAGACTTGGATCATTTGATT+TGG - Chr4:67807161-67807180 MsG0480022076.01.T01:CDS 35.0%
GAGAGAAACGAATGGATAAA+AGG - Chr4:67806982-67807001 MsG0480022076.01.T01:CDS 35.0%
GTATGCTGCTAGGAAAAAAT+GGG - Chr4:67809184-67809203 MsG0480022076.01.T01:intron 35.0%
GTTGAGCAAGATCAAAATGT+TGG + Chr4:67808591-67808610 None:intergenic 35.0%
TATTGCGGTGAATTTGTGTA+GGG - Chr4:67808751-67808770 MsG0480022076.01.T01:intron 35.0%
TGAGCAATACGAAGAAAAAC+AGG + Chr4:67808613-67808632 None:intergenic 35.0%
TGGATATCTATGTCAGAACT+GGG - Chr4:67808903-67808922 MsG0480022076.01.T01:intron 35.0%
TGGTTGAACTACTAAATTGG+AGG - Chr4:67809381-67809400 MsG0480022076.01.T01:intron 35.0%
TTATAGACCTTGAAGAAGAG+TGG + Chr4:67807844-67807863 None:intergenic 35.0%
TTATGGCTCTTTGGTTATTG+TGG - Chr4:67809264-67809283 MsG0480022076.01.T01:intron 35.0%
TTATTGCGGTGAATTTGTGT+AGG - Chr4:67808750-67808769 MsG0480022076.01.T01:intron 35.0%
TTCAAAATCGCACACTTTAC+TGG + Chr4:67807641-67807660 None:intergenic 35.0%
TTCCATACCCTTGACTATAA+AGG + Chr4:67808381-67808400 None:intergenic 35.0%
TTGAACTACTAAATTGGAGG+AGG - Chr4:67809384-67809403 MsG0480022076.01.T01:intron 35.0%
TTGGATATCTATGTCAGAAC+TGG - Chr4:67808902-67808921 MsG0480022076.01.T01:intron 35.0%
! AGTACAGCACTTTTCAACAA+TGG - Chr4:67808418-67808437 MsG0480022076.01.T01:intron 35.0%
! CTAATACTAAATATAGCGGG+TGG + Chr4:67809422-67809441 None:intergenic 35.0%
! CTTAGTTCTTTCACAAACGT+TGG - Chr4:67808832-67808851 MsG0480022076.01.T01:intron 35.0%
! CTTTTCAACTGTTTGAACCT+TGG + Chr4:67807776-67807795 None:intergenic 35.0%
!! AAATAAAAGATGGTGGGGTT+AGG - Chr4:67807445-67807464 MsG0480022076.01.T01:CDS 35.0%
!! AATAAAAGATGGTGGGGTTA+GGG - Chr4:67807446-67807465 MsG0480022076.01.T01:CDS 35.0%
!! ACCTACCTTCTAAAATCTAC+AGG + Chr4:67808655-67808674 None:intergenic 35.0%
!! TCCTGTAGATTTTAGAAGGT+AGG - Chr4:67808651-67808670 MsG0480022076.01.T01:intron 35.0%
!! TTGTTTGGTAAGGCATTGTT+TGG + Chr4:67808541-67808560 None:intergenic 35.0%
!!! CCTGTATATATTTTGGTCCA+AGG - Chr4:67807756-67807775 MsG0480022076.01.T01:CDS 35.0%
!!! GGTATGTTTTGGTTGTATTG+GGG - Chr4:67809527-67809546 MsG0480022076.01.T01:intron 35.0%
!!! TGTTGTTTTTTGTGTAGGTG+GGG - Chr4:67808339-67808358 MsG0480022076.01.T01:intron 35.0%
!!! TTGTTTTAGAGGCCAATGAA+GGG - Chr4:67809218-67809237 MsG0480022076.01.T01:intron 35.0%
AACTACTAAATTGGAGGAGG+TGG - Chr4:67809387-67809406 MsG0480022076.01.T01:intron 40.0%
AAGTGATGCTTCAGGAACAA+TGG - Chr4:67808195-67808214 MsG0480022076.01.T01:intron 40.0%
ACCACCTTGATTGTTTGGTA+AGG + Chr4:67808551-67808570 None:intergenic 40.0%
ACCTTGAAGAAGAGTGGTTT+GGG + Chr4:67807838-67807857 None:intergenic 40.0%
AGATCAAAATGTTGGAGAGG+AGG + Chr4:67808583-67808602 None:intergenic 40.0%
AGTGATGCTTCAGGAACAAT+GGG - Chr4:67808196-67808215 MsG0480022076.01.T01:intron 40.0%
ATATTAGCAGAGCAGCAGAA+TGG + Chr4:67809323-67809342 None:intergenic 40.0%
CCCTTCAATTTATGGCTCTT+TGG - Chr4:67809255-67809274 MsG0480022076.01.T01:intron 40.0%
CGTATTGCTCAATACAAAGC+TGG - Chr4:67808622-67808641 MsG0480022076.01.T01:intron 40.0%
CTAATCCTTGTAATCAGCCT+TGG - Chr4:67809496-67809515 MsG0480022076.01.T01:intron 40.0%
GAGAAAATGATGTGGAGTGT+TGG - Chr4:67807525-67807544 MsG0480022076.01.T01:CDS 40.0%
GATCAAAATGTTGGAGAGGA+GGG + Chr4:67808582-67808601 None:intergenic 40.0%
GCAAGATCAAAATGTTGGAG+AGG + Chr4:67808586-67808605 None:intergenic 40.0%
GGATATCTATGTCAGAACTG+GGG - Chr4:67808904-67808923 MsG0480022076.01.T01:intron 40.0%
GTTCTCCTCTGTTTATGCTA+TGG - Chr4:67808134-67808153 MsG0480022076.01.T01:intron 40.0%
GTTTGGAGGACAGAAATTTG+TGG + Chr4:67808524-67808543 None:intergenic 40.0%
TAAATTGGAGGAGGTGGAAA+TGG - Chr4:67809393-67809412 MsG0480022076.01.T01:intron 40.0%
TACATGCTGCATCCATCAAA+GGG - Chr4:67808868-67808887 MsG0480022076.01.T01:intron 40.0%
TACCAAACAATCAAGGTGGT+TGG - Chr4:67808551-67808570 MsG0480022076.01.T01:intron 40.0%
TAGCGTTAGACCATGTACAA+TGG + Chr4:67807593-67807612 None:intergenic 40.0%
TATACAGGTTAGAGTAGAGG+TGG + Chr4:67807744-67807763 None:intergenic 40.0%
TCAAAGGGTCAAAAACTGGT+TGG - Chr4:67808883-67808902 MsG0480022076.01.T01:intron 40.0%
TCAGAACTGGGGACAAAATT+GGG - Chr4:67808915-67808934 MsG0480022076.01.T01:intron 40.0%
TCCATCAAAGGGTCAAAAAC+TGG - Chr4:67808879-67808898 MsG0480022076.01.T01:intron 40.0%
TCCTCTGTTTATGCTATGGT+GGG - Chr4:67808138-67808157 MsG0480022076.01.T01:intron 40.0%
TGTGGGATTCAGTAGATTCA+CGG - Chr4:67806358-67806377 MsG0480022076.01.T01:three_prime_UTR 40.0%
TTCAACAATGGCTTAAGCTG+TGG - Chr4:67808430-67808449 MsG0480022076.01.T01:intron 40.0%
! ACCAGTTTTTGACCCTTTGA+TGG + Chr4:67808883-67808902 None:intergenic 40.0%
! ATGTGTGAAGTGAAGAGTGT+TGG + Chr4:67807884-67807903 None:intergenic 40.0%
! GCTTATTGAAGATGAGTTGG+AGG - Chr4:67806831-67806850 MsG0480022076.01.T01:CDS 40.0%
! GTGGCTCTTGCTATGAAATT+AGG - Chr4:67808449-67808468 MsG0480022076.01.T01:intron 40.0%
! TACTGGTTAGAGTAGAGCTA+TGG + Chr4:67807624-67807643 None:intergenic 40.0%
! TCTTTTGGTCAAACCTACAC+TGG - Chr4:67809036-67809055 MsG0480022076.01.T01:intron 40.0%
!! CTCAAATCCTCTAGAGCATA+TGG - Chr4:67809061-67809080 MsG0480022076.01.T01:intron 40.0%
!! GAAAAGTGCTGTACTCAAAG+CGG + Chr4:67808413-67808432 None:intergenic 40.0%
!! TTTGGTAAGGCATTGTTTGG+AGG + Chr4:67808538-67808557 None:intergenic 40.0%
!!! GTTGTTTTAGAGGCCAATGA+AGG - Chr4:67809217-67809236 MsG0480022076.01.T01:intron 40.0%
AAACATACCTTACCCAGCCA+AGG + Chr4:67809516-67809535 None:intergenic 45.0%
AATGCACATGCCACCTTCTA+TGG - Chr4:67808169-67808188 MsG0480022076.01.T01:intron 45.0%
AGCATCACTTCCTCCATAGA+AGG + Chr4:67808185-67808204 None:intergenic 45.0%
ATAATGTTGCTCCAGCTGGA+TGG - Chr4:67809013-67809032 MsG0480022076.01.T01:intron 45.0%
ATCACTTCCTCCATAGAAGG+TGG + Chr4:67808182-67808201 None:intergenic 45.0%
ATTCAATACCCCCATGGACT+TGG + Chr4:67806779-67806798 None:intergenic 45.0%
ATTTGTGGCAGTGACCACAA+TGG + Chr4:67808509-67808528 None:intergenic 45.0%
CACCAACCACCTTGATTGTT+TGG + Chr4:67808556-67808575 None:intergenic 45.0%
CCTCTGTTTATGCTATGGTG+GGG - Chr4:67808139-67808158 MsG0480022076.01.T01:intron 45.0%
CCTTGAAGAAGAGTGGTTTG+GGG + Chr4:67807837-67807856 None:intergenic 45.0%
CTCCTCTGTTTATGCTATGG+TGG - Chr4:67808137-67808156 MsG0480022076.01.T01:intron 45.0%
GACCTTGAAGAAGAGTGGTT+TGG + Chr4:67807839-67807858 None:intergenic 45.0%
GCCTTACCAAACAATCAAGG+TGG - Chr4:67808547-67808566 MsG0480022076.01.T01:intron 45.0%
GGTGTGCTAATGACCATAGA+TGG - Chr4:67808470-67808489 MsG0480022076.01.T01:intron 45.0%
GTACATGCTGCATCCATCAA+AGG - Chr4:67808867-67808886 MsG0480022076.01.T01:intron 45.0%
GTCAGAACTGGGGACAAAAT+TGG - Chr4:67808914-67808933 MsG0480022076.01.T01:intron 45.0%
TATGGAGGAAGTGATGCTTC+AGG - Chr4:67808187-67808206 MsG0480022076.01.T01:intron 45.0%
TCCAATAATGTTGCTCCAGC+TGG - Chr4:67809009-67809028 MsG0480022076.01.T01:intron 45.0%
TCCAGCTGGAGCAACATTAT+TGG + Chr4:67809013-67809032 None:intergenic 45.0%
TTTCACAAACGTTGGTGTGC+TGG - Chr4:67808840-67808859 MsG0480022076.01.T01:intron 45.0%
! AGGGTGTCATGCAGAAGAAA+GGG - Chr4:67808770-67808789 MsG0480022076.01.T01:intron 45.0%
! GAAGATGAGTTGGAGGAGTT+TGG - Chr4:67806838-67806857 MsG0480022076.01.T01:CDS 45.0%
! GCTGCATGCTATTGGTTGTT+TGG - Chr4:67807015-67807034 MsG0480022076.01.T01:CDS 45.0%
! TAGGGTGTCATGCAGAAGAA+AGG - Chr4:67808769-67808788 MsG0480022076.01.T01:intron 45.0%
! TGGCTGGGTAAGGTATGTTT+TGG - Chr4:67809516-67809535 MsG0480022076.01.T01:intron 45.0%
! TGGTTTGGGGAGAATAGCAT+GGG + Chr4:67807824-67807843 None:intergenic 45.0%
! TGTTTATGCTATGGTGGGGA+TGG - Chr4:67808143-67808162 MsG0480022076.01.T01:intron 45.0%
!! AAGTCCATGGGGGTATTGAA+TGG - Chr4:67806778-67806797 MsG0480022076.01.T01:three_prime_UTR 45.0%
!! AGTCCATGGGGGTATTGAAT+GGG - Chr4:67806779-67806798 MsG0480022076.01.T01:three_prime_UTR 45.0%
!! GTGAAGTGAAGAGTGTTGGT+GGG + Chr4:67807880-67807899 None:intergenic 45.0%
!! TGTGAAGTGAAGAGTGTTGG+TGG + Chr4:67807881-67807900 None:intergenic 45.0%
!!! GGCTTACATTGGCTTGCTTT+TGG - Chr4:67808095-67808114 MsG0480022076.01.T01:intron 45.0%
!! GTTTATAATTAAATTAAAAA+AGG + Chr4:67807374-67807393 None:intergenic 5.0%
ACACCCATTCAATACCCCCA+TGG + Chr4:67806785-67806804 None:intergenic 50.0%
CCCCAAACCACTCTTCTTCA+AGG - Chr4:67807834-67807853 MsG0480022076.01.T01:CDS 50.0%
CCCCACCATAGCATAAACAG+AGG + Chr4:67808142-67808161 None:intergenic 50.0%
CCTTGTAATCAGCCTTGGCT+GGG - Chr4:67809501-67809520 MsG0480022076.01.T01:intron 50.0%
GAGGATTTGAGCACCAGTGT+AGG + Chr4:67809052-67809071 None:intergenic 50.0%
GTGTCATGCAGAAGAAAGGG+GGG - Chr4:67808773-67808792 MsG0480022076.01.T01:intron 50.0%
TAATCAGCCTTGGCTGGGTA+AGG - Chr4:67809506-67809525 MsG0480022076.01.T01:intron 50.0%
TCCTTGTAATCAGCCTTGGC+TGG - Chr4:67809500-67809519 MsG0480022076.01.T01:intron 50.0%
TCGCTTCCAATTGCACAACG+TGG - Chr4:67806909-67806928 MsG0480022076.01.T01:CDS 50.0%
TGACCAAAAGACCATCCAGC+TGG + Chr4:67809027-67809046 None:intergenic 50.0%
TGACCACAATGGAACCAGGA+AGG + Chr4:67808498-67808517 None:intergenic 50.0%
TGTTTAAACACTGACCCGCC+AGG - Chr4:67806879-67806898 MsG0480022076.01.T01:CDS 50.0%
! GCAGAAGAAAGGGGGGTATA+AGG - Chr4:67808780-67808799 MsG0480022076.01.T01:intron 50.0%
! GGGTGTCATGCAGAAGAAAG+GGG - Chr4:67808771-67808790 MsG0480022076.01.T01:intron 50.0%
! GGTGTCATGCAGAAGAAAGG+GGG - Chr4:67808772-67808791 MsG0480022076.01.T01:intron 50.0%
! GTGGTTTGGGGAGAATAGCA+TGG + Chr4:67807825-67807844 None:intergenic 50.0%
! TTTTGTGTAGGTGGGGCTTG+TGG - Chr4:67808346-67808365 MsG0480022076.01.T01:intron 50.0%
!! AACCAGGAAGGCACCATCTA+TGG + Chr4:67808486-67808505 None:intergenic 50.0%
!! CCATGGACTTGGTCTTAGAG+CGG + Chr4:67806768-67806787 None:intergenic 50.0%
!! CGCTCTAAGACCAAGTCCAT+GGG - Chr4:67806766-67806785 MsG0480022076.01.T01:three_prime_UTR 50.0%
!! CTCTAAGACCAAGTCCATGG+GGG - Chr4:67806768-67806787 MsG0480022076.01.T01:three_prime_UTR 50.0%
!! GCTCTAAGACCAAGTCCATG+GGG - Chr4:67806767-67806786 MsG0480022076.01.T01:three_prime_UTR 50.0%
ACCAATAGCATGCAGCCACG+TGG + Chr4:67807011-67807030 None:intergenic 55.0%
ATGGATAAAAGGGGGCCACG+TGG - Chr4:67806993-67807012 MsG0480022076.01.T01:CDS 55.0%
CCCAGCCAAGGCTGATTACA+AGG + Chr4:67809504-67809523 None:intergenic 55.0%
GACCATAGATGGTGCCTTCC+TGG - Chr4:67808481-67808500 MsG0480022076.01.T01:intron 55.0%
GACGCGGAGAGAGAAACGAA+TGG - Chr4:67806974-67806993 MsG0480022076.01.T01:CDS 55.0%
GCACATGCCACCTTCTATGG+AGG - Chr4:67808172-67808191 MsG0480022076.01.T01:intron 55.0%
GCAGTGACCACAATGGAACC+AGG + Chr4:67808502-67808521 None:intergenic 55.0%
GTAGGTGGGGCTTGTGGATA+TGG - Chr4:67808352-67808371 MsG0480022076.01.T01:intron 55.0%
GTGCCTTCCTGGTTCCATTG+TGG - Chr4:67808492-67808511 MsG0480022076.01.T01:intron 55.0%
! GCTCCAGCTGGATGGTCTTT+TGG - Chr4:67809021-67809040 MsG0480022076.01.T01:intron 55.0%
!! CCGCTCTAAGACCAAGTCCA+TGG - Chr4:67806765-67806784 MsG0480022076.01.T01:three_prime_UTR 55.0%
CACGCGCCACGTTGTGCAAT+TGG + Chr4:67806918-67806937 None:intergenic 60.0%
GCCACGTGGCTGCATGCTAT+TGG - Chr4:67807007-67807026 MsG0480022076.01.T01:CDS 60.0%
GTGCAATTGGAAGCGACGCG+TGG + Chr4:67806905-67806924 None:intergenic 60.0%
ACAGCACGCGTGAGCGTCAG+AGG - Chr4:67806952-67806971 MsG0480022076.01.T01:CDS 65.0%
ATTGGAAGCGACGCGTGGCC+TGG + Chr4:67806900-67806919 None:intergenic 65.0%
CTGACGCTCACGCGTGCTGT+CGG + Chr4:67806952-67806971 None:intergenic 65.0%
CGCGTGAGCGTCAGAGGACG+CGG - Chr4:67806958-67806977 MsG0480022076.01.T01:CDS 70.0%
GAAGCGACGCGTGGCCTGGC+GGG + Chr4:67806896-67806915 None:intergenic 75.0%
GGAAGCGACGCGTGGCCTGG+CGG + Chr4:67806897-67806916 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
Chr4 gene 67806357 67809599 67806357 ID=MsG0480022076.01;Name=MsG0480022076.01
Chr4 mRNA 67806357 67809599 67806357 ID=MsG0480022076.01.T01;Parent=MsG0480022076.01;Name=MsG0480022076.01.T01;_AED=0.15;_eAED=0.15;_QI=0|0.66|0.75|0.75|1|1|4|446|281
Chr4 exon 67806357 67807184 67806357 ID=MsG0480022076.01.T01:exon:8381;Parent=MsG0480022076.01.T01
Chr4 exon 67807288 67807600 67807288 ID=MsG0480022076.01.T01:exon:8380;Parent=MsG0480022076.01.T01
Chr4 exon 67807739 67807866 67807739 ID=MsG0480022076.01.T01:exon:8379;Parent=MsG0480022076.01.T01
Chr4 exon 67809577 67809599 67809577 ID=MsG0480022076.01.T01:exon:8378;Parent=MsG0480022076.01.T01
Chr4 CDS 67809577 67809599 67809577 ID=MsG0480022076.01.T01:cds;Parent=MsG0480022076.01.T01
Chr4 CDS 67807739 67807866 67807739 ID=MsG0480022076.01.T01:cds;Parent=MsG0480022076.01.T01
Chr4 CDS 67807288 67807600 67807288 ID=MsG0480022076.01.T01:cds;Parent=MsG0480022076.01.T01
Chr4 CDS 67806803 67807184 67806803 ID=MsG0480022076.01.T01:cds;Parent=MsG0480022076.01.T01
Chr4 three_prime_UTR 67806357 67806802 67806357 ID=MsG0480022076.01.T01:three_prime_utr;Parent=MsG0480022076.01.T01
Gene Sequence

>MsG0480022076.01.T01

ATGTGGGATTCAGTAGATTCACGGAAATGGCTTACATTGGCTTGCTTTTGGTGTGTTCTCTCACTATGTTCTCCTCTGTTTATGCTATGGTGGGGATGGACTAATGCACATGCCACCTTCTATGGAGGAAGTGATGCTTCAGGAACAATGGGTGGGGCTTGTGGATATGGTAACCTTTATAGTCAAGGGTATGGAACAAACACTGCCGCTTTGAGTACAGCACTTTTCAACAATGGCTTAAGCTGTGGCTCTTGCTATGAAATTAGGTGTGCTAATGACCATAGATGGTGCCTTCCTGGTTCCATTGTGGTCACTGCCACAAATTTCTGTCCTCCAAACAATGCCTTACCAAACAATCAAGGTGGTTGGTGTAACCCTCCTCTCCAACATTTTGATCTTGCTCAACCTGTTTTTCTTCGTATTGCTCAATACAAAGCTGGAATTGTTCCTGTAGATTTTAGAAGGGTGTCATGCAGAAGAAAGGGGGGTATAAGGTTCACTATTAATGGACATTCTTACTTTAACTTAGTTCTTTCACAAACGTTGGTGTGCTGGAGATGTACATGCTGCATCCATCAAAGGGTCAAAAACTGGTTGGATATCTATGTCAGAACTGGGGACAAAATTGGGCAGAGCAACAATTATCTCAATGGTCAAAGTTTGTCTTTAAGGTTACAACTAGTGATGGTCGTACTGTTGTTTCCAATAATGTTGCTCCAGCTGGATGGTCTTTTGGTCAAACCTACACTGGTGCTCAAATCCTCTAGAGCATATGGTCAAATTCCAGTTTCAAGTTTAGAAATACTACTACACATTTTAAGTATTGTAGTAAGATTTGTAGTTTAG
Protein sequence

>MsG0480022076.01.T01

MWDSVDSRKWLTLACFWCVLSLCSPLFMLWWGWTNAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIRCANDHRWCLPGSIVVTATNFCPPNNALPNNQGGWCNPPLQHFDLAQPVFLRIAQYKAGIVPVDFRRVSCRRKGGIRFTINGHSYFNLVLSQTLVCWRCTCCIHQRVKNWLDIYVRTGDKIGQSNNYLNGQSLSLRLQLVMVVLLFPIMLLQLDGLLVKPTLVLKSSRAYGQIPVSSLEILLHILSIVVRFVV*