AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780036859.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780036859.01.T01 MTR_7g021870 64.655 348 12 8 1 246 1 339 1.28e-136 388
MsG0780036859.01.T01 MTR_7g064210 70.000 60 4 1 68 127 184 229 5.05e-17 80.1
MsG0780036859.01.T01 MTR_2g022940 71.429 56 2 1 70 125 2 43 5.06e-16 75.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780036859.01.T01 AT1G10840 52.616 344 51 9 4 244 2 336 1.32e-103 304
MsG0780036859.01.T01 AT1G10840 44.574 258 34 7 87 244 1 249 7.96e-55 177

Find 74 sgRNAs with CRISPR-Local

Find 334 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATCATTTCAAGCTGGTAAT+TGG 0.226228 7:-15164843 None:intergenic
TCGATAAGGGATGAGGAAAA+TGG 0.274383 7:-15163716 None:intergenic
TTAGTCACTGGACAACTTCT+TGG 0.276228 7:+15164631 MsG0780036859.01.T01:CDS
ACCTGGGTGACTGGAGTATC+AGG 0.276667 7:-15166704 None:intergenic
TCCTATCGTTCTCCGGCGTT+AGG 0.289743 7:+15163668 MsG0780036859.01.T01:five_prime_UTR
TTGATGTTATGCAGGGTTGC+TGG 0.312036 7:+15168775 MsG0780036859.01.T01:intron
TTCAGTTTCAATTCCATTAC+CGG 0.316223 7:+15166981 MsG0780036859.01.T01:intron
AATCAGCTCCACAGTTTGAT+AGG 0.326172 7:-15165077 None:intergenic
TACAATGCTTAATTATCTTC+AGG 0.338733 7:-15164591 None:intergenic
GAACAACAAAAGGTTTGTTT+AGG 0.345500 7:+15166892 MsG0780036859.01.T01:CDS
TATTACCTGGTAATTCATAA+AGG 0.355740 7:-15165104 None:intergenic
TTCACTGATGGAGAGAAATA+TGG 0.361656 7:+15166834 MsG0780036859.01.T01:CDS
CTTGTCAATTGAACAACAAA+AGG 0.384746 7:+15166882 MsG0780036859.01.T01:CDS
CCTATCGTTCTCCGGCGTTA+GGG 0.388655 7:+15163669 MsG0780036859.01.T01:five_prime_UTR
CATAATATTCTCATCCATAT+AGG 0.399466 7:-15168910 None:intergenic
ATTACACTGCTTACAATTGA+AGG 0.404516 7:-15169002 None:intergenic
TCCGCTTCAGATTCCAATCA+TGG 0.413684 7:+15163755 MsG0780036859.01.T01:exon
GTATCATTTACCTGGGTGAC+TGG 0.429555 7:-15166713 None:intergenic
ATTTCTCTCCATCAGTGAAC+TGG 0.432642 7:-15166830 None:intergenic
TTACTTGTAGTAGCCATGAT+TGG 0.437921 7:-15163768 None:intergenic
CGGTCATAAAAGCACTGATA+AGG 0.438398 7:-15166673 None:intergenic
AAGTGATACCATACCGGAAA+AGG 0.443936 7:-15164693 None:intergenic
AGTTGTTCAGATGGAAGGAT+TGG 0.452989 7:+15163946 MsG0780036859.01.T01:CDS
CACTGGACAACTTCTTGGAT+TGG 0.458201 7:+15164636 MsG0780036859.01.T01:CDS
ACCGGAGCTGTCTCGTCAGC+AGG 0.461115 7:+15166999 MsG0780036859.01.T01:CDS
GAAAATGGGTCGGAAGTTGC+AGG 0.467595 7:-15163701 None:intergenic
TCCATCTGAACAACTCTAAG+AGG 0.468041 7:-15163938 None:intergenic
CACTCACCTTCTTTAGTCAC+TGG 0.478333 7:+15164619 MsG0780036859.01.T01:CDS
GAAGATAATTAAGCATTGTA+AGG 0.480417 7:+15164594 MsG0780036859.01.T01:CDS
CCCTAACGCCGGAGAACGAT+AGG 0.480597 7:-15163669 None:intergenic
CCTATGAAATACTAGATTGA+GGG 0.481625 7:+15166028 MsG0780036859.01.T01:intron
AACGCTGTGAAAATCGATAA+GGG 0.483469 7:-15163729 None:intergenic
TGATGTTATGCAGGGTTGCT+GGG 0.490690 7:+15168776 MsG0780036859.01.T01:intron
AATATTATGATGCACAATAG+AGG 0.491658 7:+15168924 MsG0780036859.01.T01:three_prime_UTR
AAACGCTGTGAAAATCGATA+AGG 0.492265 7:-15163730 None:intergenic
CTTAGAGTTGTTCAGATGGA+AGG 0.493585 7:+15163941 MsG0780036859.01.T01:CDS
CAACTTCTTGGATTGGATGT+TGG 0.499911 7:+15164643 MsG0780036859.01.T01:CDS
TCAAGCTGTTGCAACGGAAG+AGG 0.504590 7:+15163907 MsG0780036859.01.T01:CDS
GCCTGCTGACGAGACAGCTC+CGG 0.512231 7:-15167000 None:intergenic
TCAGCAGGCTCGCAGCAGCA+TGG 0.514586 7:+15167014 MsG0780036859.01.T01:CDS
GGTCATAAAAGCACTGATAA+GGG 0.516859 7:-15166672 None:intergenic
CGATAAGGGATGAGGAAAAT+GGG 0.517929 7:-15163715 None:intergenic
TAACAGACTCTATTTGCTGA+AGG 0.522716 7:+15168807 MsG0780036859.01.T01:CDS
AGTTGTCCAGTGACTAAAGA+AGG 0.523423 7:-15164625 None:intergenic
CAGCATGGCTTCAGAAGAGA+AGG 0.527349 7:+15167029 MsG0780036859.01.T01:CDS
TGACGAGACAGCTCCGGTAA+TGG 0.530719 7:-15166994 None:intergenic
TTACACTGCTTACAATTGAA+GGG 0.537669 7:-15169001 None:intergenic
GCAGATGAGGGAAGAGGACG+AGG 0.541211 7:+15164802 MsG0780036859.01.T01:intron
GTGAAAATCGATAAGGGATG+AGG 0.541833 7:-15163723 None:intergenic
ATTATCAACCAGTTCACTGA+TGG 0.546443 7:+15166822 MsG0780036859.01.T01:CDS
TCCTCTTAGAGTTGTTCAGA+TGG 0.548192 7:+15163937 MsG0780036859.01.T01:CDS
AGGTACCAGTCTACATTGCT+TGG 0.556079 7:+15165052 MsG0780036859.01.T01:intron
TATCATGGTGGATATCTTCG+AGG 0.560932 7:+15166060 MsG0780036859.01.T01:CDS
TGAGGGAGAAGAACTTATCA+TGG 0.564344 7:+15166045 MsG0780036859.01.T01:CDS
GCTGAAGGCTTTGCATGAGG+AGG 0.564403 7:+15168822 MsG0780036859.01.T01:CDS
TGAAACCTTTATGAATTACC+AGG 0.564604 7:+15165099 MsG0780036859.01.T01:CDS
AGCACCTCATCATTTCAAGC+TGG 0.578673 7:-15164850 None:intergenic
AGGAGCCAAGCAATGTAGAC+TGG 0.584447 7:-15165057 None:intergenic
AATGTGGACAATAATACCGT+TGG 0.593681 7:+15164884 MsG0780036859.01.T01:CDS
TTTGCTGAAGGCTTTGCATG+AGG 0.593958 7:+15168819 MsG0780036859.01.T01:CDS
ATTTCTTCAAGCTGTTGCAA+CGG 0.609939 7:+15163901 MsG0780036859.01.T01:CDS
ACCTGATACTCCAGTCACCC+AGG 0.616375 7:+15166703 MsG0780036859.01.T01:CDS
GACGAGGAAATTGAAGCTGA+TGG 0.623039 7:+15164818 MsG0780036859.01.T01:CDS
GCCATGATTGGAATCTGAAG+CGG 0.629932 7:-15163756 None:intergenic
TGGAGTATCAGGTTCCAGCT+CGG 0.633779 7:-15166693 None:intergenic
ATTACCAGCTTGAAATGATG+AGG 0.641532 7:+15164846 MsG0780036859.01.T01:CDS
GGAAGAAGAAACCCTAACGC+CGG 0.645805 7:-15163680 None:intergenic
TGGACAATAATACCGTTGGA+TGG 0.649223 7:+15164888 MsG0780036859.01.T01:CDS
AAGGGATGAGGAAAATGGGT+CGG 0.652781 7:-15163711 None:intergenic
AAATGATACATACCATCCAA+CGG 0.660331 7:-15164900 None:intergenic
GCTTGGCTCCTATCAAACTG+TGG 0.682405 7:+15165069 MsG0780036859.01.T01:CDS
GGGAGAAGAACTTATCATGG+TGG 0.685784 7:+15166048 MsG0780036859.01.T01:CDS
AATGATGAGGTGCTTGAGAG+AGG 0.697805 7:+15164859 MsG0780036859.01.T01:CDS
GTGCTTGAGAGAGGTCAATG+TGG 0.716267 7:+15164868 MsG0780036859.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATGATAAACTTTAAAAAAAA+TGG - Chr7:15165681-15165700 None:intergenic 10.0%
!!! ATTTTCATCATTTAATAAAT+TGG - Chr7:15166450-15166469 None:intergenic 10.0%
!! AAGATATATACCATTAATAA+GGG - Chr7:15168713-15168732 None:intergenic 15.0%
!! ATTTCAATAGAAAGATTATT+TGG - Chr7:15166377-15166396 None:intergenic 15.0%
!! CATTTAACAATTTAATAATC+AGG + Chr7:15165762-15165781 MsG0780036859.01.T01:intron 15.0%
!! CTAACTTTACAATAAAAAAA+TGG - Chr7:15167109-15167128 None:intergenic 15.0%
!! TAAGATATATACCATTAATA+AGG - Chr7:15168714-15168733 None:intergenic 15.0%
!! TCGAAAATTAGATTAAAAAA+TGG - Chr7:15163808-15163827 None:intergenic 15.0%
!! TTATTTGATCAAATACTTAA+AGG - Chr7:15166119-15166138 None:intergenic 15.0%
!! TTTGTAATTTCATATGTTTA+TGG + Chr7:15164144-15164163 MsG0780036859.01.T01:intron 15.0%
!!! AAAAGATTATAGCATTTTAT+TGG + Chr7:15165396-15165415 MsG0780036859.01.T01:intron 15.0%
!!! TTGTTTTCTTAAAATGATAT+AGG + Chr7:15164172-15164191 MsG0780036859.01.T01:intron 15.0%
!!! TTTTATTTTATAAGCAATTG+TGG + Chr7:15168251-15168270 MsG0780036859.01.T01:intron 15.0%
!! AAAAACAATTAACTAGCAAA+AGG - Chr7:15169061-15169080 None:intergenic 20.0%
!! AAATACTTTACAAACATACA+AGG - Chr7:15164464-15164483 None:intergenic 20.0%
!! AACTAAATTTAAATAGCCAA+AGG - Chr7:15166751-15166770 None:intergenic 20.0%
!! AATAAGCTGAAAACAATTTA+TGG + Chr7:15164330-15164349 MsG0780036859.01.T01:intron 20.0%
!! AATTATCAGTTAATTGTTAG+AGG - Chr7:15165503-15165522 None:intergenic 20.0%
!! ACTTATTAGAGTTTATCTAT+TGG - Chr7:15164413-15164432 None:intergenic 20.0%
!! ATCTTCAAACAATCTAAATT+TGG - Chr7:15167565-15167584 None:intergenic 20.0%
!! ATGAAAATTTACTTGTGAAA+AGG + Chr7:15167714-15167733 MsG0780036859.01.T01:intron 20.0%
!! TATAATTAAGAATGTCCAAT+AGG + Chr7:15165349-15165368 MsG0780036859.01.T01:intron 20.0%
!! TGAAAAATGTTGTCTTTATT+TGG + Chr7:15164044-15164063 MsG0780036859.01.T01:intron 20.0%
!! TGTATAGTTATATGTTATTG+TGG + Chr7:15165184-15165203 MsG0780036859.01.T01:intron 20.0%
!! TTCATGTCATAAATTCAATT+GGG + Chr7:15167427-15167446 MsG0780036859.01.T01:intron 20.0%
!! TTTCATGTCATAAATTCAAT+TGG + Chr7:15167426-15167445 MsG0780036859.01.T01:intron 20.0%
!!! AAAAATGTTGTCTTTATTTG+GGG + Chr7:15164046-15164065 MsG0780036859.01.T01:intron 20.0%
!!! AAAATCCAATTAGAACTTTT+TGG + Chr7:15168682-15168701 MsG0780036859.01.T01:intron 20.0%
!!! AAACCTATTAATGTTTTTTC+AGG + Chr7:15165803-15165822 MsG0780036859.01.T01:intron 20.0%
!!! AAGGATTGTAATTACATTTT+TGG + Chr7:15167503-15167522 MsG0780036859.01.T01:intron 20.0%
!!! AATAGAGGATTATTGTTTTA+AGG + Chr7:15168939-15168958 MsG0780036859.01.T01:three_prime_UTR 20.0%
!!! AGGATTGTAATTACATTTTT+GGG + Chr7:15167504-15167523 MsG0780036859.01.T01:intron 20.0%
!!! ATGTAATATCTTTTCCTATA+TGG + Chr7:15168896-15168915 MsG0780036859.01.T01:three_prime_UTR 20.0%
!!! GAAAAATGTTGTCTTTATTT+GGG + Chr7:15164045-15164064 MsG0780036859.01.T01:intron 20.0%
!!! GGTAAGTTTTTAAATTTTGA+TGG + Chr7:15168505-15168524 MsG0780036859.01.T01:intron 20.0%
!!! TAAAATGCTATAATCTTTTG+TGG - Chr7:15165395-15165414 None:intergenic 20.0%
!!! TACTACATTTTTCTTTTGTA+TGG + Chr7:15168226-15168245 MsG0780036859.01.T01:intron 20.0%
!!! TTAAAAGTATGCTAGAATTT+TGG + Chr7:15167665-15167684 MsG0780036859.01.T01:intron 20.0%
!!! TTTTGATAGGTTTTATTGTA+TGG + Chr7:15164069-15164088 MsG0780036859.01.T01:intron 20.0%
!!! TTTTGGTTTTTGTTATTACA+GGG + Chr7:15168334-15168353 MsG0780036859.01.T01:intron 20.0%
! AAAAAAAATGGAGAAAACCT+AGG - Chr7:15165669-15165688 None:intergenic 25.0%
! AAGCAGTTCAGTATTAAATA+GGG - Chr7:15166606-15166625 None:intergenic 25.0%
! AATATTATGATGCACAATAG+AGG + Chr7:15168924-15168943 MsG0780036859.01.T01:three_prime_UTR 25.0%
! ACAAAATTGTACCAAGATAA+AGG - Chr7:15167531-15167550 None:intergenic 25.0%
! ATAAATCAAGAACTATTACC+TGG - Chr7:15165120-15165139 None:intergenic 25.0%
! ATAATCAAAACCATTCATCA+TGG + Chr7:15166475-15166494 MsG0780036859.01.T01:intron 25.0%
! ATATGAACTAAAGTATGCTT+GGG + Chr7:15165602-15165621 MsG0780036859.01.T01:intron 25.0%
! ATTGTAAAGTTAGATTCCAT+AGG + Chr7:15167116-15167135 MsG0780036859.01.T01:intron 25.0%
! CAATTAGTTCAGTCTAATTA+TGG + Chr7:15168311-15168330 MsG0780036859.01.T01:intron 25.0%
! CACATTAAATAGTAAACTAC+AGG - Chr7:15165222-15165241 None:intergenic 25.0%
! CATAATATTCTCATCCATAT+AGG - Chr7:15168913-15168932 None:intergenic 25.0%
! CTTAAAATTACACAGCTTAA+GGG - Chr7:15168006-15168025 None:intergenic 25.0%
! TAAGCAGTTCAGTATTAAAT+AGG - Chr7:15166607-15166626 None:intergenic 25.0%
! TAATCACTTATCTAACATGA+TGG + Chr7:15165013-15165032 MsG0780036859.01.T01:intron 25.0%
! TAATTAGACTGAACTAATTG+AGG - Chr7:15168311-15168330 None:intergenic 25.0%
! TACAATGCTTAATTATCTTC+AGG - Chr7:15164594-15164613 None:intergenic 25.0%
! TAGTTGGAAATTAAAGAACT+TGG - Chr7:15168534-15168553 None:intergenic 25.0%
! TATATGAACTAAAGTATGCT+TGG + Chr7:15165601-15165620 MsG0780036859.01.T01:intron 25.0%
! TATTACCTGGTAATTCATAA+AGG - Chr7:15165107-15165126 None:intergenic 25.0%
! TCTCCTGAAAAAACATTAAT+AGG - Chr7:15165809-15165828 None:intergenic 25.0%
! TCTTAAAATTACACAGCTTA+AGG - Chr7:15168007-15168026 None:intergenic 25.0%
! TTGATAAACACGATTTGATT+TGG + Chr7:15164967-15164986 MsG0780036859.01.T01:intron 25.0%
! TTGGAAATTTGATTGTTATG+AGG - Chr7:15168465-15168484 None:intergenic 25.0%
! TTTAGATTGTTTGAAGATAG+AGG + Chr7:15167567-15167586 MsG0780036859.01.T01:intron 25.0%
!! ACTTTTTATTGAGCAATACA+TGG + Chr7:15167798-15167817 MsG0780036859.01.T01:intron 25.0%
!! AGATAATTTTCAAACCATTC+TGG + Chr7:15164534-15164553 MsG0780036859.01.T01:intron 25.0%
!! CATTTGTCATCAAAATTTTG+TGG + Chr7:15167463-15167482 MsG0780036859.01.T01:intron 25.0%
!! CTTTTTATTGAGCAATACAT+GGG + Chr7:15167799-15167818 MsG0780036859.01.T01:intron 25.0%
!! GAAGATAATTAAGCATTGTA+AGG + Chr7:15164594-15164613 MsG0780036859.01.T01:CDS 25.0%
!! TAAAAACTTACCCATTGATT+TGG - Chr7:15168497-15168516 None:intergenic 25.0%
!! TAACACCAAAAAGTTCTAAT+TGG - Chr7:15168690-15168709 None:intergenic 25.0%
!! TGTTGAAATTTAGAATGTGT+AGG + Chr7:15166413-15166432 MsG0780036859.01.T01:intron 25.0%
!! TTTGTAAAGTATTTGAAGCA+TGG + Chr7:15164470-15164489 MsG0780036859.01.T01:intron 25.0%
!!! ATTTCTAAAATTTGCAGATG+AGG + Chr7:15164789-15164808 MsG0780036859.01.T01:intron 25.0%
!!! GTTTAGGTTTTCATTTAGTT+GGG + Chr7:15166908-15166927 MsG0780036859.01.T01:intron 25.0%
!!! GTTTTGGTTTTTGTTATTAC+AGG + Chr7:15168333-15168352 MsG0780036859.01.T01:intron 25.0%
!!! TGTTTAGGTTTTCATTTAGT+TGG + Chr7:15166907-15166926 MsG0780036859.01.T01:intron 25.0%
!!! TTTAGGTTTTCATTTAGTTG+GGG + Chr7:15166909-15166928 MsG0780036859.01.T01:intron 25.0%
!!! TTTCTAAAATTTGCAGATGA+GGG + Chr7:15164790-15164809 MsG0780036859.01.T01:intron 25.0%
AAAAAGAAGTGATACCATAC+CGG - Chr7:15164702-15164721 None:intergenic 30.0%
AAATGATACATACCATCCAA+CGG - Chr7:15164903-15164922 None:intergenic 30.0%
AACTATTGCAACCAAATCAA+TGG + Chr7:15168483-15168502 MsG0780036859.01.T01:intron 30.0%
ACTATTGCAACCAAATCAAT+GGG + Chr7:15168484-15168503 MsG0780036859.01.T01:intron 30.0%
AGACTCATACATATGTAAAG+TGG - Chr7:15164931-15164950 None:intergenic 30.0%
ATTACACTGCTTACAATTGA+AGG - Chr7:15169005-15169024 None:intergenic 30.0%
ATTTGTGCTAGTGAAAATGT+AGG + Chr7:15165557-15165576 MsG0780036859.01.T01:intron 30.0%
CATAATATATGACCCATCAA+GGG + Chr7:15165848-15165867 MsG0780036859.01.T01:intron 30.0%
CCTATGAAATACTAGATTGA+GGG + Chr7:15166028-15166047 MsG0780036859.01.T01:intron 30.0%
CTTGTCAATTGAACAACAAA+AGG + Chr7:15166882-15166901 MsG0780036859.01.T01:CDS 30.0%
GATTGCAGTATAAAGAATCT+TGG + Chr7:15166258-15166277 MsG0780036859.01.T01:intron 30.0%
GGATTGCAGTATAAAAATCT+TGG + Chr7:15166499-15166518 MsG0780036859.01.T01:intron 30.0%
GGCTACTTATCATGATATTA+AGG + Chr7:15165417-15165436 MsG0780036859.01.T01:intron 30.0%
TATACAAATCCACAAAACTC+CGG - Chr7:15165170-15165189 None:intergenic 30.0%
TATCAATTAGACTACAGTCT+TGG + Chr7:15166351-15166370 MsG0780036859.01.T01:intron 30.0%
TATTCATAAATGTGTGACGA+TGG + Chr7:15165700-15165719 MsG0780036859.01.T01:intron 30.0%
TCCTATGAAATACTAGATTG+AGG + Chr7:15166027-15166046 MsG0780036859.01.T01:intron 30.0%
TCTAATAAGTCAATCCAAAC+TGG + Chr7:15164423-15164442 MsG0780036859.01.T01:intron 30.0%
TGAAACCTTTATGAATTACC+AGG + Chr7:15165099-15165118 MsG0780036859.01.T01:CDS 30.0%
TGATCAAAACACATTCATCA+TGG + Chr7:15166233-15166252 MsG0780036859.01.T01:intron 30.0%
TGATTTAGCATTCTGATTCA+CGG - Chr7:15167263-15167282 None:intergenic 30.0%
TGTCAACTAGACTATAATCT+TGG + Chr7:15166575-15166594 MsG0780036859.01.T01:intron 30.0%
TTACACTGCTTACAATTGAA+GGG - Chr7:15169004-15169023 None:intergenic 30.0%
TTCAGTTTCAATTCCATTAC+CGG + Chr7:15166981-15167000 MsG0780036859.01.T01:intron 30.0%
! AACCATGATTAAGCACTTTT+TGG - Chr7:15168744-15168763 None:intergenic 30.0%
! GAACAACAAAAGGTTTGTTT+AGG + Chr7:15166892-15166911 MsG0780036859.01.T01:CDS 30.0%
! GAATTTTGGACTAAACGTTA+AGG + Chr7:15167679-15167698 MsG0780036859.01.T01:intron 30.0%
! GTGATGTATCTTAGGATTTT+GGG + Chr7:15168034-15168053 MsG0780036859.01.T01:intron 30.0%
! GTTCAATAAGTTGAATTGTC+TGG + Chr7:15168648-15168667 MsG0780036859.01.T01:intron 30.0%
! GTTCAGTCTAATTATGGTTT+TGG + Chr7:15168317-15168336 MsG0780036859.01.T01:intron 30.0%
! TATCGCAGCAATAATTTTAC+TGG + Chr7:15165930-15165949 MsG0780036859.01.T01:intron 30.0%
! TGATGTATCTTAGGATTTTG+GGG + Chr7:15168035-15168054 MsG0780036859.01.T01:intron 30.0%
! TGCATATTTTTCACTTAAGC+CGG + Chr7:15165148-15165167 MsG0780036859.01.T01:intron 30.0%
! TGTGATGTATCTTAGGATTT+TGG + Chr7:15168033-15168052 MsG0780036859.01.T01:intron 30.0%
! TGTTTTCAGCTTATTTCCAT+AGG - Chr7:15164325-15164344 None:intergenic 30.0%
!! ATTGATTTGGTTGCAATAGT+TGG - Chr7:15168484-15168503 None:intergenic 30.0%
!! GGAATTTTTGATTGAATGCA+TGG + Chr7:15166855-15166874 MsG0780036859.01.T01:CDS 30.0%
!! GTTTCAATATGATGGATTCA+TGG + Chr7:15167316-15167335 MsG0780036859.01.T01:intron 30.0%
!! GTTTTATTGTATGGAATTGC+GGG + Chr7:15164078-15164097 MsG0780036859.01.T01:intron 30.0%
!! TCTTTATTTGGGGTTTTGAT+AGG + Chr7:15164056-15164075 MsG0780036859.01.T01:intron 30.0%
!! TTTGGTGTTACCCTTATTAA+TGG + Chr7:15168700-15168719 MsG0780036859.01.T01:intron 30.0%
!!! AGTTTTTAGCTGAAAACTCT+TGG - Chr7:15168125-15168144 None:intergenic 30.0%
!!! GGTTTTATTGTATGGAATTG+CGG + Chr7:15164077-15164096 MsG0780036859.01.T01:intron 30.0%
AAACGCTGTGAAAATCGATA+AGG - Chr7:15163733-15163752 None:intergenic 35.0%
AACCAAAAGATAACACCATC+AGG - Chr7:15164561-15164580 None:intergenic 35.0%
AACCATAGCAAACACAACAA+CGG - Chr7:15167364-15167383 None:intergenic 35.0%
AACGCTGTGAAAATCGATAA+GGG - Chr7:15163732-15163751 None:intergenic 35.0%
AAGCTATTAAAGAGAGCCTA+TGG + Chr7:15164306-15164325 MsG0780036859.01.T01:intron 35.0%
AATCAGAATGCTAAATCAGC+TGG + Chr7:15167265-15167284 MsG0780036859.01.T01:intron 35.0%
AATGTGGACAATAATACCGT+TGG + Chr7:15164884-15164903 MsG0780036859.01.T01:CDS 35.0%
ACATACAAGGCTACATGAAA+TGG - Chr7:15164451-15164470 None:intergenic 35.0%
AGATTGTTTGAGTGAGCTTA+TGG - Chr7:15164376-15164395 None:intergenic 35.0%
AGCATGAAATTCTCATCATC+TGG - Chr7:15165636-15165655 None:intergenic 35.0%
ATACTTTGCAGAGATTCCTT+TGG + Chr7:15166732-15166751 MsG0780036859.01.T01:intron 35.0%
ATCAAAACCATTCATCATGG+TGG + Chr7:15166478-15166497 MsG0780036859.01.T01:intron 35.0%
ATCAGAATGCTAAATCAGCT+GGG + Chr7:15167266-15167285 MsG0780036859.01.T01:intron 35.0%
ATGAGTCTTTCTAACTTCAG+TGG + Chr7:15164943-15164962 MsG0780036859.01.T01:intron 35.0%
ATGATTCGACAATTGTCAGT+GGG - Chr7:15168100-15168119 None:intergenic 35.0%
ATGGATAATTCTCTGAATCC+AGG + Chr7:15165032-15165051 MsG0780036859.01.T01:intron 35.0%
ATTACCAGCTTGAAATGATG+AGG + Chr7:15164846-15164865 MsG0780036859.01.T01:CDS 35.0%
ATTATCAACCAGTTCACTGA+TGG + Chr7:15166822-15166841 MsG0780036859.01.T01:CDS 35.0%
ATTTCTTCAAGCTGTTGCAA+CGG + Chr7:15163901-15163920 MsG0780036859.01.T01:CDS 35.0%
CATACAAGGCTACATGAAAT+GGG - Chr7:15164450-15164469 None:intergenic 35.0%
CATCATTTCAAGCTGGTAAT+TGG - Chr7:15164846-15164865 None:intergenic 35.0%
CATTTGATCTCTTGGTTGAT+GGG + Chr7:15167294-15167313 MsG0780036859.01.T01:intron 35.0%
CCACTAAAATAACCAAACCA+TGG + Chr7:15168609-15168628 MsG0780036859.01.T01:intron 35.0%
CCCTCAATCTAGTATTTCAT+AGG - Chr7:15166031-15166050 None:intergenic 35.0%
CTGCAATAACCTTTCAGTAA+TGG - Chr7:15165306-15165325 None:intergenic 35.0%
GAAGATTATGTGTCAACCTA+TGG - Chr7:15167135-15167154 None:intergenic 35.0%
GATTTAGCATTCTGATTCAC+GGG - Chr7:15167262-15167281 None:intergenic 35.0%
GCATAATATATGACCCATCA+AGG + Chr7:15165847-15165866 MsG0780036859.01.T01:intron 35.0%
GTTCAGTATTAAATAGGGAG+TGG - Chr7:15166601-15166620 None:intergenic 35.0%
TACTCTTAAATCACTCGAAC+TGG + Chr7:15168568-15168587 MsG0780036859.01.T01:intron 35.0%
TATCCTTTGCTTCACATAGT+TGG - Chr7:15168550-15168569 None:intergenic 35.0%
TCAAAACACATTCATCATGG+TGG + Chr7:15166236-15166255 MsG0780036859.01.T01:intron 35.0%
TGCATAACATCAAGGGAAAA+GGG - Chr7:15168768-15168787 None:intergenic 35.0%
TGCGAAAAACGAATCAACAA+TGG - Chr7:15163867-15163886 None:intergenic 35.0%
TTACTTGTAGTAGCCATGAT+TGG - Chr7:15163771-15163790 None:intergenic 35.0%
TTATTACAGGGCTGATAACA+TGG + Chr7:15168346-15168365 MsG0780036859.01.T01:intron 35.0%
TTCACTGATGGAGAGAAATA+TGG + Chr7:15166834-15166853 MsG0780036859.01.T01:CDS 35.0%
TTGTATTCATTGTGACCACT+CGG + Chr7:15167215-15167234 MsG0780036859.01.T01:intron 35.0%
TTTCCAACTATGTGAAGCAA+AGG + Chr7:15168544-15168563 MsG0780036859.01.T01:intron 35.0%
! CGATGGTGATTTTGTCATAT+CGG + Chr7:15165717-15165736 MsG0780036859.01.T01:intron 35.0%
! CTGCAAAGTATCATTTACCT+GGG - Chr7:15166723-15166742 None:intergenic 35.0%
! GATGTATCTTAGGATTTTGG+GGG + Chr7:15168036-15168055 MsG0780036859.01.T01:intron 35.0%
! TAACAGACTCTATTTGCTGA+AGG + Chr7:15168807-15168826 MsG0780036859.01.T01:CDS 35.0%
! TCTCATGGTGCTAAAATTTG+CGG + Chr7:15167924-15167943 MsG0780036859.01.T01:intron 35.0%
! TCTGCAAAGTATCATTTACC+TGG - Chr7:15166724-15166743 None:intergenic 35.0%
! TTACTAACTGCTTCCTTTTC+CGG + Chr7:15164680-15164699 MsG0780036859.01.T01:CDS 35.0%
! TTTTCCCTTGATGTTATGCA+GGG + Chr7:15168768-15168787 MsG0780036859.01.T01:intron 35.0%
!! AGCCAAAAAGTGCTTAATCA+TGG + Chr7:15168739-15168758 MsG0780036859.01.T01:intron 35.0%
!! CAAATTTTAGCACCATGAGA+TGG - Chr7:15167924-15167943 None:intergenic 35.0%
!! CTCTGTTTGATTTTGCATCT+GGG + Chr7:15164102-15164121 MsG0780036859.01.T01:intron 35.0%
!! CTTGGTCACATTTGTTATCT+TGG + Chr7:15166276-15166295 MsG0780036859.01.T01:intron 35.0%
!! GGTCATAAAAGCACTGATAA+GGG - Chr7:15166675-15166694 None:intergenic 35.0%
!! GGTGTTATCTTTTGGTTAAC+AGG + Chr7:15164564-15164583 MsG0780036859.01.T01:intron 35.0%
!! GTTGATGGGTTTCAATATGA+TGG + Chr7:15167308-15167327 MsG0780036859.01.T01:intron 35.0%
!! TATGATGGATTCATGGTCAA+TGG + Chr7:15167323-15167342 MsG0780036859.01.T01:intron 35.0%
!! TCTCTGTTTGATTTTGCATC+TGG + Chr7:15164101-15164120 MsG0780036859.01.T01:intron 35.0%
!! TTTTTGGTGAGTGGTGTATT+GGG - Chr7:15163647-15163666 None:intergenic 35.0%
!!! CATTTTTGGGACCTTTATCT+TGG + Chr7:15167517-15167536 MsG0780036859.01.T01:intron 35.0%
!!! CCATGGTTTGGTTATTTTAG+TGG - Chr7:15168612-15168631 None:intergenic 35.0%
!!! GCTGTGTAATTTTAAGATGC+AGG + Chr7:15168010-15168029 MsG0780036859.01.T01:intron 35.0%
AAAGTCAACTGTACCACAGT+AGG - Chr7:15167783-15167802 None:intergenic 40.0%
AAATTTGCAGATGAGGGAAG+AGG + Chr7:15164796-15164815 MsG0780036859.01.T01:intron 40.0%
AACCAAACCATGGTAAAGTC+TGG + Chr7:15168619-15168638 MsG0780036859.01.T01:intron 40.0%
AACCAGACTTTACCATGGTT+TGG - Chr7:15168624-15168643 None:intergenic 40.0%
AACGAAGTATGAAGAGCTTG+TGG - Chr7:15167406-15167425 None:intergenic 40.0%
AAGTGATACCATACCGGAAA+AGG - Chr7:15164696-15164715 None:intergenic 40.0%
AATCAGCTCCACAGTTTGAT+AGG - Chr7:15165080-15165099 None:intergenic 40.0%
ACCACATTTGTTTGGCCTAT+TGG - Chr7:15165367-15165386 None:intergenic 40.0%
AGTTGTCCAGTGACTAAAGA+AGG - Chr7:15164628-15164647 None:intergenic 40.0%
AGTTGTTCAGATGGAAGGAT+TGG + Chr7:15163946-15163965 MsG0780036859.01.T01:CDS 40.0%
ATGCAGGTGTGATGTATCTT+AGG + Chr7:15168026-15168045 MsG0780036859.01.T01:intron 40.0%
ATTTCTCTCCATCAGTGAAC+TGG - Chr7:15166833-15166852 None:intergenic 40.0%
CAAAAACTCCTATCGTTCTC+CGG + Chr7:15163661-15163680 MsG0780036859.01.T01:five_prime_UTR 40.0%
CACTGACAATTGTCGAATCA+TGG + Chr7:15168099-15168118 MsG0780036859.01.T01:intron 40.0%
CAGATGTTAGCATTGTTCGT+TGG + Chr7:15165467-15165486 MsG0780036859.01.T01:intron 40.0%
CATGATTCGACAATTGTCAG+TGG - Chr7:15168101-15168120 None:intergenic 40.0%
CGATAAGGGATGAGGAAAAT+GGG - Chr7:15163718-15163737 None:intergenic 40.0%
CTGCATAACATCAAGGGAAA+AGG - Chr7:15168769-15168788 None:intergenic 40.0%
CTTAAATCACTCGAACTGGA+AGG + Chr7:15168572-15168591 MsG0780036859.01.T01:intron 40.0%
CTTAGAGTTGTTCAGATGGA+AGG + Chr7:15163941-15163960 MsG0780036859.01.T01:CDS 40.0%
GAAGAATTCCTAGCAACATG+AGG - Chr7:15164496-15164515 None:intergenic 40.0%
GAAGCTTTCAGACTCATTCA+TGG + Chr7:15165902-15165921 MsG0780036859.01.T01:intron 40.0%
GAATGAGTCTGAAAGCTTCA+AGG - Chr7:15165901-15165920 None:intergenic 40.0%
GACTGAACTAATTGAGGACA+AGG - Chr7:15168305-15168324 None:intergenic 40.0%
GCATTTGATCTCTTGGTTGA+TGG + Chr7:15167293-15167312 MsG0780036859.01.T01:intron 40.0%
GTGAAAATCGATAAGGGATG+AGG - Chr7:15163726-15163745 None:intergenic 40.0%
GTGCTTATTGCATTGTTCTG+AGG + Chr7:15165529-15165548 MsG0780036859.01.T01:intron 40.0%
TACATGAAATGGGTCCAGTT+TGG - Chr7:15164440-15164459 None:intergenic 40.0%
TCAGATGAGCCATTACTGAA+AGG + Chr7:15165294-15165313 MsG0780036859.01.T01:intron 40.0%
TCCAATAGGCCAAACAAATG+TGG + Chr7:15165363-15165382 MsG0780036859.01.T01:intron 40.0%
TCCATCTGAACAACTCTAAG+AGG - Chr7:15163941-15163960 None:intergenic 40.0%
TCCTCTTAGAGTTGTTCAGA+TGG + Chr7:15163937-15163956 MsG0780036859.01.T01:CDS 40.0%
TCGATAAGGGATGAGGAAAA+TGG - Chr7:15163719-15163738 None:intergenic 40.0%
TGAGGGAGAAGAACTTATCA+TGG + Chr7:15166045-15166064 MsG0780036859.01.T01:CDS 40.0%
TGGACAATAATACCGTTGGA+TGG + Chr7:15164888-15164907 MsG0780036859.01.T01:CDS 40.0%
TGGTGCATACCACATTTGTT+TGG - Chr7:15165375-15165394 None:intergenic 40.0%
TTAGTCACTGGACAACTTCT+TGG + Chr7:15164631-15164650 MsG0780036859.01.T01:CDS 40.0%
TTGTGGCGATACTTCTATGA+TGG + Chr7:15167480-15167499 MsG0780036859.01.T01:intron 40.0%
! AATTGCTTCTTCGTGTCGTT+TGG + Chr7:15167884-15167903 MsG0780036859.01.T01:intron 40.0%
! CAACTTCTTGGATTGGATGT+TGG + Chr7:15164643-15164662 MsG0780036859.01.T01:CDS 40.0%
! CTTTTCCCTTGATGTTATGC+AGG + Chr7:15168767-15168786 MsG0780036859.01.T01:intron 40.0%
! GGGTTTTGCATTTGATCTCT+TGG + Chr7:15167286-15167305 MsG0780036859.01.T01:intron 40.0%
! TTCCGTTGTTGTGTTTGCTA+TGG + Chr7:15167359-15167378 MsG0780036859.01.T01:intron 40.0%
!! CGGTCATAAAAGCACTGATA+AGG - Chr7:15166676-15166695 None:intergenic 40.0%
!! GAGAAGTACGTGTTTTCTTC+TGG + Chr7:15165954-15165973 MsG0780036859.01.T01:intron 40.0%
!! GATTGAAGAGAGTGTTCCTA+TGG + Chr7:15167741-15167760 MsG0780036859.01.T01:intron 40.0%
!! TACACAGCTTAAGGGCATTT+GGG - Chr7:15167998-15168017 None:intergenic 40.0%
!! TATCATGGTGGATATCTTCG+AGG + Chr7:15166060-15166079 MsG0780036859.01.T01:CDS 40.0%
!! TTACACAGCTTAAGGGCATT+TGG - Chr7:15167999-15168018 None:intergenic 40.0%
!!! GTCCTGATGGTGTTATCTTT+TGG + Chr7:15164556-15164575 MsG0780036859.01.T01:intron 40.0%
!!! GTTTTTGGTGAGTGGTGTAT+TGG - Chr7:15163648-15163667 None:intergenic 40.0%
AAGCAATGTAGACTGGTACC+TGG - Chr7:15165053-15165072 None:intergenic 45.0%
AAGGGATGAGGAAAATGGGT+CGG - Chr7:15163714-15163733 None:intergenic 45.0%
AATGGAGAAAACCTAGGCAG+TGG - Chr7:15165663-15165682 None:intergenic 45.0%
ACTCTCAAGTCGTGATGGTT+CGG - Chr7:15168440-15168459 None:intergenic 45.0%
AGCAACCCTGCATAACATCA+AGG - Chr7:15168776-15168795 None:intergenic 45.0%
AGCACCTCATCATTTCAAGC+TGG - Chr7:15164853-15164872 None:intergenic 45.0%
AGGAAACTCTCAAGTCGTGA+TGG - Chr7:15168445-15168464 None:intergenic 45.0%
AGGTACCAGTCTACATTGCT+TGG + Chr7:15165052-15165071 MsG0780036859.01.T01:intron 45.0%
ATTCATTGTGACCACTCGGT+AGG + Chr7:15167219-15167238 MsG0780036859.01.T01:intron 45.0%
CAAAGTTCCAGAGAGCTTAC+GGG - Chr7:15166090-15166109 None:intergenic 45.0%
CACTCACCTTCTTTAGTCAC+TGG + Chr7:15164619-15164638 MsG0780036859.01.T01:CDS 45.0%
CACTGGACAACTTCTTGGAT+TGG + Chr7:15164636-15164655 MsG0780036859.01.T01:CDS 45.0%
CCATCAGCTAAAAAGTCGTG+TGG + Chr7:15168149-15168168 MsG0780036859.01.T01:intron 45.0%
CCTTGAACCAGACTTTACCA+TGG - Chr7:15168629-15168648 None:intergenic 45.0%
CTGCAATCCACCATGATGAA+TGG - Chr7:15166246-15166265 None:intergenic 45.0%
GACGAGGAAATTGAAGCTGA+TGG + Chr7:15164818-15164837 MsG0780036859.01.T01:CDS 45.0%
GCAAAGTTCCAGAGAGCTTA+CGG - Chr7:15166091-15166110 None:intergenic 45.0%
GCAACCCTGCATAACATCAA+GGG - Chr7:15168775-15168794 None:intergenic 45.0%
GCCATGATTGGAATCTGAAG+CGG - Chr7:15163759-15163778 None:intergenic 45.0%
GGGAGAAGAACTTATCATGG+TGG + Chr7:15166048-15166067 MsG0780036859.01.T01:CDS 45.0%
GTATCATTTACCTGGGTGAC+TGG - Chr7:15166716-15166735 None:intergenic 45.0%
TAACACCATCAGGACCAGAA+TGG - Chr7:15164551-15164570 None:intergenic 45.0%
TCAAACCATTCTGGTCCTGA+TGG + Chr7:15164543-15164562 MsG0780036859.01.T01:intron 45.0%
TCACTCGAACTGGAAGGAAA+CGG + Chr7:15168578-15168597 MsG0780036859.01.T01:intron 45.0%
TCCGCTTCAGATTCCAATCA+TGG + Chr7:15163755-15163774 MsG0780036859.01.T01:exon 45.0%
TGATGTTATGCAGGGTTGCT+GGG + Chr7:15168776-15168795 MsG0780036859.01.T01:intron 45.0%
TGCTATTAAGCCCTGACCAT+AGG - Chr7:15167760-15167779 None:intergenic 45.0%
TTGATGTTATGCAGGGTTGC+TGG + Chr7:15168775-15168794 MsG0780036859.01.T01:intron 45.0%
TTTGCTGAAGGCTTTGCATG+AGG + Chr7:15168819-15168838 MsG0780036859.01.T01:CDS 45.0%
! AACTGCTTCCTTTTCCGGTA+TGG + Chr7:15164685-15164704 MsG0780036859.01.T01:CDS 45.0%
! AATGATGAGGTGCTTGAGAG+AGG + Chr7:15164859-15164878 MsG0780036859.01.T01:CDS 45.0%
! CCATGGTAAAGTCTGGTTCA+AGG + Chr7:15168626-15168645 MsG0780036859.01.T01:intron 45.0%
! CGGAGAACGATAGGAGTTTT+TGG - Chr7:15163663-15163682 None:intergenic 45.0%
! GGCGATACTTCTATGATGGA+AGG + Chr7:15167484-15167503 MsG0780036859.01.T01:intron 45.0%
! TCACTTAAGCCGGAGTTTTG+TGG + Chr7:15165158-15165177 MsG0780036859.01.T01:intron 45.0%
! TCGTGTGCTATTCACAACTC+TGG - Chr7:15167855-15167874 None:intergenic 45.0%
!! AAGAGAGTGTTCCTATGGTC+AGG + Chr7:15167746-15167765 MsG0780036859.01.T01:intron 45.0%
!! ACACAGCTTAAGGGCATTTG+GGG - Chr7:15167997-15168016 None:intergenic 45.0%
!! AGAGAGTGTTCCTATGGTCA+GGG + Chr7:15167747-15167766 MsG0780036859.01.T01:intron 45.0%
!!! CCACACGACTTTTTAGCTGA+TGG - Chr7:15168152-15168171 None:intergenic 45.0%
!!! CGATAGGAGTTTTTGGTGAG+TGG - Chr7:15163656-15163675 None:intergenic 45.0%
AAGCATGGCCTCATGTTGCT+AGG + Chr7:15164485-15164504 MsG0780036859.01.T01:intron 50.0%
AGGAAATCCCGTAAGCTCTC+TGG + Chr7:15166080-15166099 MsG0780036859.01.T01:intron 50.0%
AGGAGCCAAGCAATGTAGAC+TGG - Chr7:15165060-15165079 None:intergenic 50.0%
ATGGGGTTTGCAGGATTCCT+CGG - Chr7:15168403-15168422 None:intergenic 50.0%
CAGCATGGCTTCAGAAGAGA+AGG + Chr7:15167029-15167048 MsG0780036859.01.T01:CDS 50.0%
CGACAATTGTCAGTGGGCAA+CGG - Chr7:15168094-15168113 None:intergenic 50.0%
GAAAATGGGTCGGAAGTTGC+AGG - Chr7:15163704-15163723 None:intergenic 50.0%
GACAATTGTCAGTGGGCAAC+GGG - Chr7:15168093-15168112 None:intergenic 50.0%
GCTTGGCTCCTATCAAACTG+TGG + Chr7:15165069-15165088 MsG0780036859.01.T01:CDS 50.0%
GGAAGAAGAAACCCTAACGC+CGG - Chr7:15163683-15163702 None:intergenic 50.0%
GGCTTGAAAATGGGGTTTGC+AGG - Chr7:15168412-15168431 None:intergenic 50.0%
GGGCTTAATAGCACCTACTG+TGG + Chr7:15167767-15167786 MsG0780036859.01.T01:intron 50.0%
GTGCTTGAGAGAGGTCAATG+TGG + Chr7:15164868-15164887 MsG0780036859.01.T01:CDS 50.0%
TCAAGCTGTTGCAACGGAAG+AGG + Chr7:15163907-15163926 MsG0780036859.01.T01:CDS 50.0%
TGCAGGATTCCTCGGGTATA+AGG - Chr7:15168395-15168414 None:intergenic 50.0%
TTAAATTCCCGCCTACCGAG+TGG - Chr7:15167233-15167252 None:intergenic 50.0%
! CAGTGCTTTTATGACCGAGC+TGG + Chr7:15166679-15166698 MsG0780036859.01.T01:CDS 50.0%
! CGTTTTTCGCAGCTGCAACT+AGG + Chr7:15163876-15163895 MsG0780036859.01.T01:intron 50.0%
! GCGGTTTGTCGCACACTTTT+GGG + Chr7:15167943-15167962 MsG0780036859.01.T01:intron 50.0%
! GCTATCAAGGCACCATCTCA+TGG + Chr7:15167909-15167928 MsG0780036859.01.T01:intron 50.0%
! TGCGGTTTGTCGCACACTTT+TGG + Chr7:15167942-15167961 MsG0780036859.01.T01:intron 50.0%
! TGGAGTATCAGGTTCCAGCT+CGG - Chr7:15166696-15166715 None:intergenic 50.0%
!! AAACCCCATTTTCAAGCCGC+TGG + Chr7:15168414-15168433 MsG0780036859.01.T01:intron 50.0%
!! GTGTCGTTTGGCTGCTATCA+AGG + Chr7:15167896-15167915 MsG0780036859.01.T01:intron 50.0%
ACCCATCAAGGGCCGATCAA+GGG + Chr7:15165859-15165878 MsG0780036859.01.T01:intron 55.0%
ACCTGATACTCCAGTCACCC+AGG + Chr7:15166703-15166722 MsG0780036859.01.T01:CDS 55.0%
ATTGTCAGTGGGCAACGGGT+CGG - Chr7:15168089-15168108 None:intergenic 55.0%
ATTGTGACCACTCGGTAGGC+GGG + Chr7:15167223-15167242 MsG0780036859.01.T01:intron 55.0%
CAGAGCTAGGACCCCTTGAT+CGG - Chr7:15165874-15165893 None:intergenic 55.0%
CATTGTGACCACTCGGTAGG+CGG + Chr7:15167222-15167241 MsG0780036859.01.T01:intron 55.0%
CCTATCGTTCTCCGGCGTTA+GGG + Chr7:15163669-15163688 MsG0780036859.01.T01:five_prime_UTR 55.0%
GCTGAAGGCTTTGCATGAGG+AGG + Chr7:15168822-15168841 MsG0780036859.01.T01:CDS 55.0%
GCTTCAAGGCCTTCAGAGCT+AGG - Chr7:15165887-15165906 None:intergenic 55.0%
TCCTATCGTTCTCCGGCGTT+AGG + Chr7:15163668-15163687 MsG0780036859.01.T01:five_prime_UTR 55.0%
TCGGCCAGCGGCTTGAAAAT+GGG - Chr7:15168421-15168440 None:intergenic 55.0%
TCGGGTATAAGGCTCTTCCC+CGG - Chr7:15168384-15168403 None:intergenic 55.0%
TGACGAGACAGCTCCGGTAA+TGG - Chr7:15166997-15167016 None:intergenic 55.0%
TGGGGTTTGCAGGATTCCTC+GGG - Chr7:15168402-15168421 None:intergenic 55.0%
TTCGGCCAGCGGCTTGAAAA+TGG - Chr7:15168422-15168441 None:intergenic 55.0%
! ACCTGGGTGACTGGAGTATC+AGG - Chr7:15166707-15166726 None:intergenic 55.0%
! CGCACACTTTTGGGCAGCAA+TGG + Chr7:15167952-15167971 MsG0780036859.01.T01:intron 55.0%
! TCATGCTGCTTCCACTGCCT+AGG + Chr7:15165649-15165668 MsG0780036859.01.T01:intron 55.0%
!! TCAAGGGGTCCTAGCTCTGA+AGG + Chr7:15165875-15165894 MsG0780036859.01.T01:intron 55.0%
AACATGGCACGCAGAGCTGC+CGG + Chr7:15168362-15168381 MsG0780036859.01.T01:intron 60.0%
ACCCCTTGATCGGCCCTTGA+TGG - Chr7:15165864-15165883 None:intergenic 60.0%
CCCATCAAGGGCCGATCAAG+GGG + Chr7:15165860-15165879 MsG0780036859.01.T01:intron 60.0%
CCCCTTGATCGGCCCTTGAT+GGG - Chr7:15165863-15165882 None:intergenic 60.0%
CCCTAACGCCGGAGAACGAT+AGG - Chr7:15163672-15163691 None:intergenic 60.0%
CGGCCAGCGGCTTGAAAATG+GGG - Chr7:15168420-15168439 None:intergenic 60.0%
GACCCATCAAGGGCCGATCA+AGG + Chr7:15165858-15165877 MsG0780036859.01.T01:intron 60.0%
GCAGATGAGGGAAGAGGACG+AGG + Chr7:15164802-15164821 MsG0780036859.01.T01:intron 60.0%
! AGTCGTGATGGTTCGGCCAG+CGG - Chr7:15168433-15168452 None:intergenic 60.0%
! GGGGAAGAGCCTTATACCCG+AGG + Chr7:15168383-15168402 MsG0780036859.01.T01:intron 60.0%
ACATGGCACGCAGAGCTGCC+GGG + Chr7:15168363-15168382 MsG0780036859.01.T01:intron 65.0%
ACCGGAGCTGTCTCGTCAGC+AGG + Chr7:15166999-15167018 MsG0780036859.01.T01:CDS 65.0%
CAGTGGGCAACGGGTCGGAT+GGG - Chr7:15168084-15168103 None:intergenic 65.0%
GCCTGCTGACGAGACAGCTC+CGG - Chr7:15167003-15167022 None:intergenic 65.0%
TCAGCAGGCTCGCAGCAGCA+TGG + Chr7:15167014-15167033 MsG0780036859.01.T01:CDS 65.0%
TCAGTGGGCAACGGGTCGGA+TGG - Chr7:15168085-15168104 None:intergenic 65.0%
CATGGCACGCAGAGCTGCCG+GGG + Chr7:15168364-15168383 MsG0780036859.01.T01:intron 70.0%
Chromosome Type Strat End Strand Name
Chr7 gene 15163619 15169087 15163619 ID=MsG0780036859.01;Name=MsG0780036859.01
Chr7 mRNA 15163619 15169087 15163619 ID=MsG0780036859.01.T01;Parent=MsG0780036859.01;Name=MsG0780036859.01.T01;_AED=0.50;_eAED=0.50;_QI=155|0.55|0.7|1|0.44|0.5|10|238|246
Chr7 exon 15163619 15163786 15163619 ID=MsG0780036859.01.T01:exon:2475;Parent=MsG0780036859.01.T01
Chr7 exon 15163888 15163967 15163888 ID=MsG0780036859.01.T01:exon:2476;Parent=MsG0780036859.01.T01
Chr7 exon 15164586 15164706 15164586 ID=MsG0780036859.01.T01:exon:2477;Parent=MsG0780036859.01.T01
Chr7 exon 15164816 15164909 15164816 ID=MsG0780036859.01.T01:exon:2478;Parent=MsG0780036859.01.T01
Chr7 exon 15165054 15165120 15165054 ID=MsG0780036859.01.T01:exon:2479;Parent=MsG0780036859.01.T01
Chr7 exon 15166043 15166089 15166043 ID=MsG0780036859.01.T01:exon:2480;Parent=MsG0780036859.01.T01
Chr7 exon 15166655 15166724 15166655 ID=MsG0780036859.01.T01:exon:2481;Parent=MsG0780036859.01.T01
Chr7 exon 15166802 15166924 15166802 ID=MsG0780036859.01.T01:exon:2482;Parent=MsG0780036859.01.T01
Chr7 exon 15166986 15167050 15166986 ID=MsG0780036859.01.T01:exon:2483;Parent=MsG0780036859.01.T01
Chr7 exon 15168789 15169087 15168789 ID=MsG0780036859.01.T01:exon:2484;Parent=MsG0780036859.01.T01
Chr7 five_prime_UTR 15163619 15163773 15163619 ID=MsG0780036859.01.T01:five_prime_utr;Parent=MsG0780036859.01.T01
Chr7 CDS 15163774 15163786 15163774 ID=MsG0780036859.01.T01:cds;Parent=MsG0780036859.01.T01
Chr7 CDS 15163888 15163967 15163888 ID=MsG0780036859.01.T01:cds;Parent=MsG0780036859.01.T01
Chr7 CDS 15164586 15164706 15164586 ID=MsG0780036859.01.T01:cds;Parent=MsG0780036859.01.T01
Chr7 CDS 15164816 15164909 15164816 ID=MsG0780036859.01.T01:cds;Parent=MsG0780036859.01.T01
Chr7 CDS 15165054 15165120 15165054 ID=MsG0780036859.01.T01:cds;Parent=MsG0780036859.01.T01
Chr7 CDS 15166043 15166089 15166043 ID=MsG0780036859.01.T01:cds;Parent=MsG0780036859.01.T01
Chr7 CDS 15166655 15166724 15166655 ID=MsG0780036859.01.T01:cds;Parent=MsG0780036859.01.T01
Chr7 CDS 15166802 15166924 15166802 ID=MsG0780036859.01.T01:cds;Parent=MsG0780036859.01.T01
Chr7 CDS 15166986 15167050 15166986 ID=MsG0780036859.01.T01:cds;Parent=MsG0780036859.01.T01
Chr7 CDS 15168789 15168849 15168789 ID=MsG0780036859.01.T01:cds;Parent=MsG0780036859.01.T01
Chr7 three_prime_UTR 15168850 15169087 15168850 ID=MsG0780036859.01.T01:three_prime_utr;Parent=MsG0780036859.01.T01
Gene Sequence

>MsG0780036859.01.T01

ATGGCTACTACAACTGCAACTAGGTCATTTCTTCAAGCTGTTGCAACGGAAGAGGTTGCAACTCCTCTTAGAGTTGTTCAGATGGAAGGATTGGTCATCCTGAAGATAATTAAGCATTGTAAGGATCACTCACCTTCTTTAGTCACTGGACAACTTCTTGGATTGGATGTTGGCAGTGTTCTTGAAGTTACTAACTGCTTCCTTTTCCGGTATGAGGACGAGGAAATTGAAGCTGATGGTGCCAATTACCAGCTTGAAATGATGAGGTGCTTGAGAGAGGTCAATGTGGACAATAATACCGTTGGATGGTACCAGTCTACATTGCTTGGCTCCTATCAAACTGTGGAGCTGATTGAAACCTTTATGAATTACCAGATTGAGGGAGAAGAACTTATCATGGTGGATATCTTCGAGGAAATCCCATCAATTTCAAATTCTGCCCTTATCAGTGCTTTTATGACCGAGCTGGAACCTGATACTCCAGTCACCCAGTGTGATTTTGATCGTCTGCAATTATCAACCAGTTCACTGATGGAGAGAAATATGGAATTTTTGATTGAATGCATGGATGACTTGTCAATTGAACAACAAAAGGTTTGTTTAGGTTTTCATTTATTTCAATTCCATTACCGGAGCTGTCTCGTCAGCAGGCTCGCAGCAGCATGGCTTCAGAAGAGAAGGGTTGCTGGGCAAAGCTTTAACAGACTCTATTTGCTGAAGGCTTTGCATGAGGAGGATTAA
Protein sequence

>MsG0780036859.01.T01

MATTTATRSFLQAVATEEVATPLRVVQMEGLVILKIIKHCKDHSPSLVTGQLLGLDVGSVLEVTNCFLFRYEDEEIEADGANYQLEMMRCLREVNVDNNTVGWYQSTLLGSYQTVELIETFMNYQIEGEELIMVDIFEEIPSISNSALISAFMTELEPDTPVTQCDFDRLQLSTSSLMERNMEFLIECMDDLSIEQQKVCLGFHLFQFHYRSCLVSRLAAAWLQKRRVAGQSFNRLYLLKALHEED*