AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180003623.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180003623.01.T02 MTR_1g066990 99.257 404 3 0 3 406 2 405 0.0 820
MsG0180003623.01.T02 MTR_1g045410 93.350 406 27 0 1 406 1 406 0.0 738
MsG0180003623.01.T02 MTR_5g025120 92.750 400 29 0 7 406 9 408 0.0 727
MsG0180003623.01.T01 MTR_1g066990 99.257 404 3 0 3 406 2 405 0.0 820
MsG0180003623.01.T01 MTR_1g045410 93.350 406 27 0 1 406 1 406 0.0 738
MsG0180003623.01.T01 MTR_5g025120 92.750 400 29 0 7 406 9 408 0.0 727
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180003623.01.T02 AT3G09630 82.020 406 73 0 1 406 1 406 0.0 693
MsG0180003623.01.T02 AT3G09630 81.773 406 73 1 1 406 1 405 0.0 686
MsG0180003623.01.T02 AT5G02870 80.788 406 78 0 1 406 2 407 0.0 680
MsG0180003623.01.T02 AT5G02870 80.542 406 78 1 1 406 2 406 0.0 674
MsG0180003623.01.T01 AT3G09630 82.020 406 73 0 1 406 1 406 0.0 693
MsG0180003623.01.T01 AT3G09630 81.773 406 73 1 1 406 1 405 0.0 686
MsG0180003623.01.T01 AT5G02870 80.788 406 78 0 1 406 2 407 0.0 680
MsG0180003623.01.T01 AT5G02870 80.542 406 78 1 1 406 2 406 0.0 674

Find 20 sgRNAs with CRISPR-Local

Find 341 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAATGCCCTACAAATAATTT+TGG 0.100036 1:+65340833 None:intergenic
TCCAATATTTCGACTTCATA+TGG 0.294449 1:-65342939 MsG0180003623.01.T01:three_prime_UTR
TCCATATGAAGTCGAAATAT+TGG 0.314726 1:+65342938 None:intergenic
CTAATTGAATGTTGTTCTCT+AGG 0.334090 1:-65343071 MsG0180003623.01.T01:three_prime_UTR
TCTCTCCCAAAATTATTTGT+AGG 0.371411 1:-65340839 MsG0180003623.01.T01:three_prime_UTR
TTTGAGATTATGATATTGTA+AGG 0.394038 1:-65343026 MsG0180003623.01.T01:three_prime_UTR
CAAAATTATTTGTAGGGCAT+TGG 0.403690 1:-65340832 MsG0180003623.01.T01:three_prime_UTR
TTGTGAGACACCCAACCATT+TGG 0.429854 1:+65343128 None:intergenic
CTCTCCCAAAATTATTTGTA+GGG 0.437542 1:-65340838 MsG0180003623.01.T01:three_prime_UTR
AAAAGCATGGTACAATACTA+TGG 0.446415 1:-65343187 MsG0180003623.01.T01:CDS
GACAACTTCTCCAAATGGTT+GGG 0.457303 1:-65343138 MsG0180003623.01.T01:CDS
CGACAACTTCTCCAAATGGT+TGG 0.475554 1:-65343139 MsG0180003623.01.T01:CDS
CAAAATTTGAGTGGGGCTAA+AGG 0.478747 1:+65342884 None:intergenic
AATTCGACAACTTCTCCAAA+TGG 0.487072 1:-65343143 MsG0180003623.01.T01:CDS
GGAAGAAGCTACTGCTATCA+AGG 0.505228 1:-65343217 MsG0180003623.01.T01:CDS
GCTACTGCTATCAAGGCTGC+AGG 0.570583 1:-65343210 MsG0180003623.01.T01:CDS
TCAAGGCTGCAGGAAAAGCA+TGG 0.627406 1:-65343200 MsG0180003623.01.T01:CDS
AAATATTGGATTACAACGAG+AGG 0.654014 1:+65342952 None:intergenic
TCTCACAATGAAGTGTCTCA+TGG 0.672237 1:-65343113 MsG0180003623.01.T01:exon
TTTGAGTGGGGCTAAAGGTG+TGG 0.674405 1:+65342889 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAATAATTTAATAATAAAA+CGG + Chr1:65344746-65344765 None:intergenic 0.0%
!!! TTTTGAAAATATATTTCATT+TGG + Chr1:65344974-65344993 None:intergenic 10.0%
!! AAGAATTAAAGATAAAATAG+TGG + Chr1:65345186-65345205 None:intergenic 15.0%
!! ATTCAAATTTGTGTTATAAT+CGG - Chr1:65343924-65343943 MsG0180003623.01.T01:intron 15.0%
!! TATTTATTTGTTTGTGTATT+TGG - Chr1:65342917-65342936 MsG0180003623.01.T01:intron 15.0%
!! TGTATAAATGATATTACTAA+TGG - Chr1:65342836-65342855 MsG0180003623.01.T01:intron 15.0%
!!! TATCATTTTCAAATTCTAAA+GGG + Chr1:65342270-65342289 None:intergenic 15.0%
!!! TTATCATTTTCAAATTCTAA+AGG + Chr1:65342271-65342290 None:intergenic 15.0%
!!! TTTGCATATATGTTTTTTAA+TGG + Chr1:65344362-65344381 None:intergenic 15.0%
!! ACATGTATGTTAAATGTAAT+TGG - Chr1:65342949-65342968 MsG0180003623.01.T01:three_prime_UTR 20.0%
!! ACCAAGAATAAACATATATA+TGG + Chr1:65344951-65344970 None:intergenic 20.0%
!! ACCATATATATGTTTATTCT+TGG - Chr1:65344947-65344966 MsG0180003623.01.T01:CDS 20.0%
!! ACTAATTAACAACAATGTAA+TGG + Chr1:65342030-65342049 None:intergenic 20.0%
!! ATAATATTGTATGTTGGAAT+TGG + Chr1:65342885-65342904 None:intergenic 20.0%
!! ATATTAGAGAAATCTAAGAA+TGG + Chr1:65345506-65345525 None:intergenic 20.0%
!! ATCTTTAATTCTTTCTGTAA+TGG - Chr1:65345193-65345212 MsG0180003623.01.T01:CDS 20.0%
!! ATTCCAACATACAATATTAT+AGG - Chr1:65342885-65342904 MsG0180003623.01.T01:intron 20.0%
!! ATTTGAGTGAAGATTTAATT+TGG - Chr1:65342135-65342154 MsG0180003623.01.T01:intron 20.0%
!! TAACCTATAATATTGTATGT+TGG + Chr1:65342891-65342910 None:intergenic 20.0%
!! TATTAAATTATTATCCCACT+TGG - Chr1:65344752-65344771 MsG0180003623.01.T01:CDS 20.0%
!! TCAAGAAACAAAAGATTATA+TGG + Chr1:65345446-65345465 None:intergenic 20.0%
!! TCTATTTAAATCTAAACTTG+AGG - Chr1:65343958-65343977 MsG0180003623.01.T01:intron 20.0%
!!! ATGTTTGACTTTTTAAATGT+GGG - Chr1:65344237-65344256 MsG0180003623.01.T01:intron 20.0%
!!! ATTTTGAAATATTGTTGATG+TGG - Chr1:65342505-65342524 MsG0180003623.01.T01:intron 20.0%
!!! TATAATCTTTTGTTTCTTGA+AGG - Chr1:65345446-65345465 MsG0180003623.01.T01:CDS 20.0%
!!! TTATCACGTAAAATTTTCAA+AGG - Chr1:65345287-65345306 MsG0180003623.01.T01:CDS 20.0%
!!! TTCTAAAATGAAACTTAGAT+TGG - Chr1:65342194-65342213 MsG0180003623.01.T01:intron 20.0%
!!! TTTAAAAAGTGTATTCTCAA+TGG + Chr1:65344214-65344233 None:intergenic 20.0%
!!! TTTGAGATTATGATATTGTA+AGG - Chr1:65343438-65343457 MsG0180003623.01.T01:intron 20.0%
!!! TTTTGAAATATTGTTGATGT+GGG - Chr1:65342506-65342525 MsG0180003623.01.T01:intron 20.0%
! AAAATTCCTTATGCTTATGT+TGG + Chr1:65345595-65345614 None:intergenic 25.0%
! ACAAAGATATTCAACTAACA+TGG + Chr1:65343185-65343204 None:intergenic 25.0%
! ACTAGTATTGTGGATAAAAA+AGG - Chr1:65344082-65344101 MsG0180003623.01.T01:intron 25.0%
! AGCCTAAAAATAAAACTCTT+AGG - Chr1:65345323-65345342 MsG0180003623.01.T01:CDS 25.0%
! ATAACATTGAGATTCTTCAA+AGG + Chr1:65341842-65341861 None:intergenic 25.0%
! ATGATCCATAAAACAACAAA+AGG + Chr1:65342487-65342506 None:intergenic 25.0%
! ATTCCCTTAGTTAAACTTAA+AGG - Chr1:65345122-65345141 MsG0180003623.01.T01:CDS 25.0%
! ATTTAGGAAGATTTGTGATT+TGG - Chr1:65341621-65341640 MsG0180003623.01.T01:intron 25.0%
! CTCAATTGACATATATACTA+GGG + Chr1:65342449-65342468 None:intergenic 25.0%
! GGAAAAAAATCTTTCATATC+AGG + Chr1:65343494-65343513 None:intergenic 25.0%
! GTATAATCTTTCACAATACA+TGG - Chr1:65344323-65344342 MsG0180003623.01.T01:intron 25.0%
! TCTCAATTGACATATATACT+AGG + Chr1:65342450-65342469 None:intergenic 25.0%
! TTAGATTGGTAAGCAATAAT+AGG - Chr1:65342208-65342227 MsG0180003623.01.T01:intron 25.0%
!! AAAATGAAATGGTGGAATTA+GGG + Chr1:65340826-65340845 None:intergenic 25.0%
!! AATGCCCTACAAATAATTTT+GGG + Chr1:65345633-65345652 None:intergenic 25.0%
!! AGGTTTTACTTTATTGTCTT+TGG - Chr1:65343413-65343432 MsG0180003623.01.T01:intron 25.0%
!! ATTCATCAAACTCTCTTTTA+AGG - Chr1:65344508-65344527 MsG0180003623.01.T01:intron 25.0%
!! CTTTAAAAGAGTTCATCAAA+TGG + Chr1:65342631-65342650 None:intergenic 25.0%
!! GATCCTTTAAGTTTAACTAA+GGG + Chr1:65345128-65345147 None:intergenic 25.0%
!! TAAAAAAGTCGCAAATGTTT+TGG + Chr1:65343903-65343922 None:intergenic 25.0%
!! TAATGGCTTTTACTTCTTTA+TGG + Chr1:65344626-65344645 None:intergenic 25.0%
!! TGACACTTGATAAACTTTTA+AGG - Chr1:65344398-65344417 MsG0180003623.01.T01:intron 25.0%
!! TGATCCTTTAAGTTTAACTA+AGG + Chr1:65345129-65345148 None:intergenic 25.0%
!! TTCATCAAACTCTCTTTTAA+GGG - Chr1:65344509-65344528 MsG0180003623.01.T01:intron 25.0%
!! TTTAGAATATCTATAACGTG+AGG + Chr1:65342181-65342200 None:intergenic 25.0%
!! TTTGAAATATTGTTGATGTG+GGG - Chr1:65342507-65342526 MsG0180003623.01.T01:intron 25.0%
!! TTTTGTCGTTAAAGTAAATG+TGG - Chr1:65344435-65344454 MsG0180003623.01.T01:intron 25.0%
!!! AGAAGTATTAATCAAACGAT+GGG + Chr1:65345386-65345405 None:intergenic 25.0%
!!! ATCAAGCTTTTGAAATCAAT+TGG - Chr1:65341386-65341405 MsG0180003623.01.T01:intron 25.0%
!!! ATTCACCTTTTGTTGTTTTA+TGG - Chr1:65342479-65342498 MsG0180003623.01.T01:intron 25.0%
!!! ATTCACGTGTTTGTTTTTTA+GGG + Chr1:65344823-65344842 None:intergenic 25.0%
!!! CATGTTTGACTTTTTAAATG+TGG - Chr1:65344236-65344255 MsG0180003623.01.T01:intron 25.0%
!!! TATTCACGTGTTTGTTTTTT+AGG + Chr1:65344824-65344843 None:intergenic 25.0%
!!! TCTGATTCACATTGATTTTA+CGG + Chr1:65341223-65341242 None:intergenic 25.0%
!!! TTTTTAGGCTTTATATCTCT+AGG + Chr1:65345313-65345332 None:intergenic 25.0%
!!! TTTTTTTGCAACTAGTATTG+TGG - Chr1:65344072-65344091 MsG0180003623.01.T01:intron 25.0%
AAATATTGGATTACAACGAG+AGG + Chr1:65343515-65343534 None:intergenic 30.0%
AAATGAGAATGCACAAAATG+TGG - Chr1:65343877-65343896 MsG0180003623.01.T01:intron 30.0%
AACAAACACGTGAATAATAG+CGG - Chr1:65344828-65344847 MsG0180003623.01.T01:CDS 30.0%
AAGAGAGTTTGATGAATCAA+AGG + Chr1:65344505-65344524 None:intergenic 30.0%
AAGATTCAACCTTTCAACAT+TGG + Chr1:65341579-65341598 None:intergenic 30.0%
ACAAGAGTGAATACACAATT+TGG + Chr1:65342572-65342591 None:intergenic 30.0%
AGAATCGAATTGAGAATACA+TGG + Chr1:65344027-65344046 None:intergenic 30.0%
AGAATCTCAATGTTATGTTG+AGG - Chr1:65341846-65341865 MsG0180003623.01.T01:intron 30.0%
AGATAGAATATACACCACAT+TGG + Chr1:65344546-65344565 None:intergenic 30.0%
ATCTCTCATTTCCAATATGA+TGG - Chr1:65342361-65342380 MsG0180003623.01.T01:intron 30.0%
CAAAATTATTTGTAGGGCAT+TGG - Chr1:65345632-65345651 MsG0180003623.01.T01:five_prime_UTR 30.0%
CATGCTTGACATTATTAACT+TGG - Chr1:65342328-65342347 MsG0180003623.01.T01:intron 30.0%
CTAATTGAATGTTGTTCTCT+AGG - Chr1:65343393-65343412 MsG0180003623.01.T01:intron 30.0%
CTCTCCCAAAATTATTTGTA+GGG - Chr1:65345626-65345645 MsG0180003623.01.T01:five_prime_UTR 30.0%
CTTGTCAAAAGAACCATAAA+TGG + Chr1:65341675-65341694 None:intergenic 30.0%
GAGGACTAAAACAAATTCAA+GGG + Chr1:65342162-65342181 None:intergenic 30.0%
GGACTATAATGACAACAAAT+TGG + Chr1:65342428-65342447 None:intergenic 30.0%
GTAATAATACAGACGAATCT+TGG + Chr1:65343994-65344013 None:intergenic 30.0%
TAAACCTATGGATCACTTAA+AGG - Chr1:65344686-65344705 MsG0180003623.01.T01:CDS 30.0%
TAATGTCAATGCCATCATAT+TGG + Chr1:65342375-65342394 None:intergenic 30.0%
TCCAATATTTCGACTTCATA+TGG - Chr1:65343525-65343544 MsG0180003623.01.T01:intron 30.0%
TCCATATGAAGTCGAAATAT+TGG + Chr1:65343529-65343548 None:intergenic 30.0%
TCTCAAGTATATACGTAATG+TGG - Chr1:65344903-65344922 MsG0180003623.01.T01:CDS 30.0%
TCTCTCCCAAAATTATTTGT+AGG - Chr1:65345625-65345644 MsG0180003623.01.T01:five_prime_UTR 30.0%
TCTGATACTTAAATTCGAAG+TGG - Chr1:65344044-65344063 MsG0180003623.01.T01:intron 30.0%
TCTGCTAGCAATGAAAATAA+AGG - Chr1:65344715-65344734 MsG0180003623.01.T01:CDS 30.0%
TGAGGACTAAAACAAATTCA+AGG + Chr1:65342163-65342182 None:intergenic 30.0%
TGCTCATTTGGATGAAAAAA+GGG - Chr1:65344164-65344183 MsG0180003623.01.T01:intron 30.0%
TGGATGAAAAAAGGGAAAAA+GGG - Chr1:65344172-65344191 MsG0180003623.01.T01:intron 30.0%
TGTATGTAATGCTTCAAGAA+GGG - Chr1:65343746-65343765 MsG0180003623.01.T01:intron 30.0%
TGTGTTCAGAGAAAATGAAA+TGG + Chr1:65340837-65340856 None:intergenic 30.0%
TTCTGTAAACAGTCATAAAG+AGG - Chr1:65345052-65345071 MsG0180003623.01.T01:CDS 30.0%
TTGAAATATTGTTGATGTGG+GGG - Chr1:65342508-65342527 MsG0180003623.01.T01:intron 30.0%
TTGATATCACCAATGTTGAA+AGG - Chr1:65341567-65341586 MsG0180003623.01.T01:intron 30.0%
TTGCTCATTTGGATGAAAAA+AGG - Chr1:65344163-65344182 MsG0180003623.01.T01:intron 30.0%
TTGGATGAAAAAAGGGAAAA+AGG - Chr1:65344171-65344190 MsG0180003623.01.T01:intron 30.0%
TTGTATGTAATGCTTCAAGA+AGG - Chr1:65343745-65343764 MsG0180003623.01.T01:intron 30.0%
! AAAAGCATGGTACAATACTA+TGG - Chr1:65343277-65343296 MsG0180003623.01.T01:intron 30.0%
! AAGAGTTCATCAAATGGATT+TGG + Chr1:65342625-65342644 None:intergenic 30.0%
! AGAGTTCATCAAATGGATTT+GGG + Chr1:65342624-65342643 None:intergenic 30.0%
! ATAATGAGTGTCGTGTTTAA+TGG + Chr1:65344667-65344686 None:intergenic 30.0%
! ATATGGAGACATTTTTACGA+TGG + Chr1:65345429-65345448 None:intergenic 30.0%
! CAATGCCCTACAAATAATTT+TGG + Chr1:65345634-65345653 None:intergenic 30.0%
! GAAAATGAAATGGTGGAATT+AGG + Chr1:65340827-65340846 None:intergenic 30.0%
! GAAATGTATTTGAAACCAAG+TGG + Chr1:65342399-65342418 None:intergenic 30.0%
!! GAGAAGTATTAATCAAACGA+TGG + Chr1:65345387-65345406 None:intergenic 30.0%
!!! ATAGAGACTGATTTGCTTTT+TGG - Chr1:65342798-65342817 MsG0180003623.01.T01:intron 30.0%
!!! CATCATTTTGATTGCTCATT+TGG - Chr1:65344152-65344171 MsG0180003623.01.T01:intron 30.0%
!!! CTTATTTTGACCATTCAGAA+TGG - Chr1:65343834-65343853 MsG0180003623.01.T01:intron 30.0%
!!! GGCCTAAGAGTTTTATTTTT+AGG + Chr1:65345328-65345347 None:intergenic 30.0%
!!! TCATTTTTAGTGTTACTTGC+AGG - Chr1:65342658-65342677 MsG0180003623.01.T01:intron 30.0%
!!! TTTTTGCTGTTTGTCTACTT+TGG - Chr1:65343152-65343171 MsG0180003623.01.T01:CDS 30.0%
AAAGTTACTTACACCCAGTA+TGG - Chr1:65344266-65344285 MsG0180003623.01.T01:intron 35.0%
AACAGCAAAAACATGCATCA+AGG + Chr1:65343143-65343162 None:intergenic 35.0%
AAGGGTCCTTTGATTGTTTA+TGG - Chr1:65341497-65341516 MsG0180003623.01.T01:intron 35.0%
AATATTGCGAAAAGCCTTCA+CGG + Chr1:65341540-65341559 None:intergenic 35.0%
AATTCGACAACTTCTCCAAA+TGG - Chr1:65343321-65343340 MsG0180003623.01.T01:intron 35.0%
ACACTTTCTTTACAGCTTTC+CGG - Chr1:65345476-65345495 MsG0180003623.01.T01:CDS 35.0%
ACAGCAAAAACATGCATCAA+GGG + Chr1:65343142-65343161 None:intergenic 35.0%
ACTTGCAGGTTTAGATTGAT+TGG - Chr1:65342672-65342691 MsG0180003623.01.T01:intron 35.0%
AGACTTCCAACATAAGCATA+AGG - Chr1:65345586-65345605 MsG0180003623.01.T01:CDS 35.0%
AGGAAAAGCTTGATAAGAAG+AGG - Chr1:65341939-65341958 MsG0180003623.01.T01:intron 35.0%
AGGCCAATAATTAGATCCTA+TGG + Chr1:65344779-65344798 None:intergenic 35.0%
CAAAGGATTCTTCTTCAAAG+TGG + Chr1:65341825-65341844 None:intergenic 35.0%
CAAAGGCAATACTGTAACAA+TGG + Chr1:65344488-65344507 None:intergenic 35.0%
CAACCATGTATGAAGATGAA+TGG - Chr1:65343089-65343108 MsG0180003623.01.T01:three_prime_UTR 35.0%
CAACCATTCATCTTCATACA+TGG + Chr1:65343095-65343114 None:intergenic 35.0%
CGACACTCATTATAAACCTA+TGG - Chr1:65344674-65344693 MsG0180003623.01.T01:CDS 35.0%
CTTGAATATGATCGTGGTAA+TGG + Chr1:65344643-65344662 None:intergenic 35.0%
GAGAAGTTGGATTCCATTTA+TGG - Chr1:65341659-65341678 MsG0180003623.01.T01:intron 35.0%
GCAATCAAAATGATGTTGAG+AGG + Chr1:65344147-65344166 None:intergenic 35.0%
GGTCCATAGGATCTAATTAT+TGG - Chr1:65344773-65344792 MsG0180003623.01.T01:CDS 35.0%
GTCATTAGTACTTCCATACT+GGG + Chr1:65344282-65344301 None:intergenic 35.0%
GTTCAGAGAAAATGAAATGG+TGG + Chr1:65340834-65340853 None:intergenic 35.0%
TCGGTACCATAAACAATCAA+AGG + Chr1:65341506-65341525 None:intergenic 35.0%
TGTCATTAGTACTTCCATAC+TGG + Chr1:65344283-65344302 None:intergenic 35.0%
! AACTGGTGTTTTCTACAGAT+CGG + Chr1:65343672-65343691 None:intergenic 35.0%
! AATGGTCTTGAATATGATCG+TGG + Chr1:65344649-65344668 None:intergenic 35.0%
! CTTATCAAGCTTTTCCTTCT+TGG + Chr1:65341936-65341955 None:intergenic 35.0%
! GGCTTTTACTTCTTTATGGT+AGG + Chr1:65344622-65344641 None:intergenic 35.0%
! TGGTGAATTCTGATTTGACT+AGG - Chr1:65341738-65341757 MsG0180003623.01.T01:intron 35.0%
! TTACGCATTTTACCTTTTCC+AGG + Chr1:65341458-65341477 None:intergenic 35.0%
! TTGATTGTTTATGGTACCGA+AGG - Chr1:65341506-65341525 MsG0180003623.01.T01:intron 35.0%
! TTTTGTGCATTCTCATTTGC+CGG + Chr1:65343875-65343894 None:intergenic 35.0%
!! AAATGGTGGAATTAGGGTTT+TGG + Chr1:65340820-65340839 None:intergenic 35.0%
!! AAGCTGTAAAGAAAGTGTTG+AGG + Chr1:65345474-65345493 None:intergenic 35.0%
!! AATGGTGGAATTAGGGTTTT+GGG + Chr1:65340819-65340838 None:intergenic 35.0%
!! AGAGACGAAAGGGTATTTAT+AGG - Chr1:65344590-65344609 MsG0180003623.01.T01:CDS 35.0%
!! ATGAGATTCAGAGTGTTGTT+AGG - Chr1:65341774-65341793 MsG0180003623.01.T01:intron 35.0%
AACACACACACACACAACAA+TGG - Chr1:65340851-65340870 MsG0180003623.01.T01:three_prime_UTR 40.0%
AAGGTAAAATGCGTAACCGT+AGG - Chr1:65341462-65341481 MsG0180003623.01.T01:intron 40.0%
AATACTGTAACAATGGCTGG+GGG + Chr1:65344481-65344500 None:intergenic 40.0%
AATGTCACCACAGAAATTCG+CGG + Chr1:65345105-65345124 None:intergenic 40.0%
ACCTATGGATCACTTAAAGG+TGG - Chr1:65344689-65344708 MsG0180003623.01.T01:CDS 40.0%
AGAGCAAACTTAGAGACGAA+AGG - Chr1:65344579-65344598 MsG0180003623.01.T01:CDS 40.0%
AGATGTTCATCACGATCAAC+TGG + Chr1:65343689-65343708 None:intergenic 40.0%
ATAGGCTATGTTGCTCTGTA+AGG - Chr1:65342226-65342245 MsG0180003623.01.T01:intron 40.0%
ATGGCAACGCAAAATTTGAG+TGG + Chr1:65343592-65343611 None:intergenic 40.0%
ATTAGATCCTATGGACCAAG+TGG + Chr1:65344770-65344789 None:intergenic 40.0%
CAAAATTTGAGTGGGGCTAA+AGG + Chr1:65343583-65343602 None:intergenic 40.0%
CAATACTGTAACAATGGCTG+GGG + Chr1:65344482-65344501 None:intergenic 40.0%
CCTATGGATCACTTAAAGGT+GGG - Chr1:65344690-65344709 MsG0180003623.01.T01:CDS 40.0%
CCTTACGAGAGATATACCTA+CGG + Chr1:65341481-65341500 None:intergenic 40.0%
CGTAGGTATATCTCTCGTAA+GGG - Chr1:65341479-65341498 MsG0180003623.01.T01:intron 40.0%
CTCTTAGCAGTCTTAGCATA+AGG + Chr1:65341878-65341897 None:intergenic 40.0%
CTTATGCTAAGACTGCTAAG+AGG - Chr1:65341876-65341895 MsG0180003623.01.T01:intron 40.0%
GAAATCTAAGAATGGACCAC+CGG + Chr1:65345498-65345517 None:intergenic 40.0%
GACAACTTCTCCAAATGGTT+GGG - Chr1:65343326-65343345 MsG0180003623.01.T01:intron 40.0%
GACCTGAAACTTGAAATTGC+AGG + Chr1:65342550-65342569 None:intergenic 40.0%
GAGAATACATGGAATCACAC+TGG + Chr1:65344016-65344035 None:intergenic 40.0%
GAGCAAACTTAGAGACGAAA+GGG - Chr1:65344580-65344599 MsG0180003623.01.T01:CDS 40.0%
GCAATACTGTAACAATGGCT+GGG + Chr1:65344483-65344502 None:intergenic 40.0%
TAAGACTGCTTTCGAGAAGT+TGG - Chr1:65341646-65341665 MsG0180003623.01.T01:intron 40.0%
TATTATCCCACTTGGTCCAT+AGG - Chr1:65344760-65344779 MsG0180003623.01.T01:CDS 40.0%
TCACTACTCTAATGTAGCTC+TGG - Chr1:65343638-65343657 MsG0180003623.01.T01:intron 40.0%
TCAGTGTGTTCAACAGAAGA+TGG + Chr1:65343611-65343630 None:intergenic 40.0%
TCCAACAACAAACGCAATGT+CGG - Chr1:65345537-65345556 MsG0180003623.01.T01:CDS 40.0%
TGAAAGGGTTAAGTCCAAGA+AGG - Chr1:65341919-65341938 MsG0180003623.01.T01:intron 40.0%
TGAGGCTAATTCTCAGTGTA+TGG + Chr1:65345349-65345368 None:intergenic 40.0%
TGGCAACGCAAAATTTGAGT+GGG + Chr1:65343591-65343610 None:intergenic 40.0%
TGGGAATTCACCATTCTGAA+TGG + Chr1:65343847-65343866 None:intergenic 40.0%
TGTGAAGAAGGATGTGAAGA+GGG - Chr1:65341799-65341818 MsG0180003623.01.T01:intron 40.0%
TTAGATCCTATGGACCAAGT+GGG + Chr1:65344769-65344788 None:intergenic 40.0%
! AAGGCTTTTCGCAATATTCC+TGG - Chr1:65341542-65341561 MsG0180003623.01.T01:intron 40.0%
! ACATTGGTGATATCAACACC+AGG + Chr1:65341563-65341582 None:intergenic 40.0%
! ATCAAATGGATTTGGGTCAC+TGG + Chr1:65342617-65342636 None:intergenic 40.0%
! CTGAGAATTAGCCTCAAAAC+AGG - Chr1:65345353-65345372 MsG0180003623.01.T01:CDS 40.0%
! GCATTTTACCTTTTCCAGGA+CGG + Chr1:65341454-65341473 None:intergenic 40.0%
! GGAGACATTTTTACGATGGT+CGG + Chr1:65345425-65345444 None:intergenic 40.0%
! TCTCACAATGAAGTGTCTCA+TGG - Chr1:65343351-65343370 MsG0180003623.01.T01:intron 40.0%
! TGGTTCTTTTGACAAGCCTT+CGG - Chr1:65341679-65341698 MsG0180003623.01.T01:intron 40.0%
! TTTGCTTGCTGAAGCTGAAA+GGG - Chr1:65341904-65341923 MsG0180003623.01.T01:intron 40.0%
!! CTCTTTTAAGGGACTCCTTT+CGG - Chr1:65344520-65344539 MsG0180003623.01.T01:CDS 40.0%
!! GTCCTGCAATTTCAAGTTTC+AGG - Chr1:65342545-65342564 MsG0180003623.01.T01:intron 40.0%
!! TGAAGGTGTTGAGAAGACTA+AGG - Chr1:65341358-65341377 MsG0180003623.01.T01:intron 40.0%
!! TGGCATTGACATTATCCACT+TGG - Chr1:65342381-65342400 MsG0180003623.01.T01:intron 40.0%
!!! AATCTTTTGAAGCTTGCACC+TGG - Chr1:65341593-65341612 MsG0180003623.01.T01:intron 40.0%
AAGCCTTCGGAGAAGAAGAA+GGG - Chr1:65341692-65341711 MsG0180003623.01.T01:intron 45.0%
AATCTTCCTAAATGCCCACC+AGG + Chr1:65341614-65341633 None:intergenic 45.0%
AATTACCCCTGTTCATTCCC+AGG - Chr1:65343226-65343245 MsG0180003623.01.T01:intron 45.0%
AGAAGGGTTATGTGCTTCCT+AGG - Chr1:65341708-65341727 MsG0180003623.01.T01:intron 45.0%
ATGGTGAATTCCCAGAACAC+CGG - Chr1:65343853-65343872 MsG0180003623.01.T01:intron 45.0%
ATTCTCATTTGCCGGTGTTC+TGG + Chr1:65343867-65343886 None:intergenic 45.0%
CCAACAACAAACGCAATGTC+GGG - Chr1:65345538-65345557 MsG0180003623.01.T01:CDS 45.0%
CCCACCTTTAAGTGATCCAT+AGG + Chr1:65344693-65344712 None:intergenic 45.0%
CCGTAGGTATATCTCTCGTA+AGG - Chr1:65341478-65341497 MsG0180003623.01.T01:intron 45.0%
CGACAACTTCTCCAAATGGT+TGG - Chr1:65343325-65343344 MsG0180003623.01.T01:intron 45.0%
CGGATCGTCTAGAGAAAATG+GGG + Chr1:65345085-65345104 None:intergenic 45.0%
CGTCTAGAGAAAATGGGGAT+TGG + Chr1:65345080-65345099 None:intergenic 45.0%
CTCTTCACATCCTTCTTCAC+AGG + Chr1:65341800-65341819 None:intergenic 45.0%
CTGTGAAGAAGGATGTGAAG+AGG - Chr1:65341798-65341817 MsG0180003623.01.T01:intron 45.0%
CTTCTTCCTGGGAATGAACA+GGG + Chr1:65343235-65343254 None:intergenic 45.0%
CTTTCTTTACAGCTTTCCGG+TGG - Chr1:65345479-65345498 MsG0180003623.01.T01:CDS 45.0%
GAAGAGGAAGACTGTCTCTA+AGG - Chr1:65341955-65341974 MsG0180003623.01.T01:intron 45.0%
GAAGGGTTATGTGCTTCCTA+GGG - Chr1:65341709-65341728 MsG0180003623.01.T01:intron 45.0%
GAATTCACCATCTTAGCCCT+AGG + Chr1:65341728-65341747 None:intergenic 45.0%
GATAGCAGTAGCTTCTTCCT+GGG + Chr1:65343246-65343265 None:intergenic 45.0%
GCAAAAACATGCATCAAGGG+AGG + Chr1:65343139-65343158 None:intergenic 45.0%
GCGGATCGTCTAGAGAAAAT+GGG + Chr1:65345086-65345105 None:intergenic 45.0%
GGAAGAAGCTACTGCTATCA+AGG - Chr1:65343247-65343266 MsG0180003623.01.T01:intron 45.0%
GGCAACGCAAAATTTGAGTG+GGG + Chr1:65343590-65343609 None:intergenic 45.0%
GGCAATACTGTAACAATGGC+TGG + Chr1:65344484-65344503 None:intergenic 45.0%
TAACCCTTCTTCTTCTCCGA+AGG + Chr1:65341698-65341717 None:intergenic 45.0%
TATACACCACATTGGCCGAA+AGG + Chr1:65344538-65344557 None:intergenic 45.0%
TGATAGCAGTAGCTTCTTCC+TGG + Chr1:65343247-65343266 None:intergenic 45.0%
TGCTAAGACTGCTAAGAGGA+TGG - Chr1:65341880-65341899 MsG0180003623.01.T01:intron 45.0%
TGTTGTTAGGCCTGTGAAGA+AGG - Chr1:65341787-65341806 MsG0180003623.01.T01:intron 45.0%
TTCTCATTTGCCGGTGTTCT+GGG + Chr1:65343866-65343885 None:intergenic 45.0%
TTCTTCCTGGGAATGAACAG+GGG + Chr1:65343234-65343253 None:intergenic 45.0%
TTGTGAGACACCCAACCATT+TGG + Chr1:65343339-65343358 None:intergenic 45.0%
! ACAGAGATCTAGCTCATCTG+TGG - Chr1:65343769-65343788 MsG0180003623.01.T01:intron 45.0%
! CAGAGATCTAGCTCATCTGT+GGG - Chr1:65343770-65343789 MsG0180003623.01.T01:intron 45.0%
! CTTTGCTTGCTGAAGCTGAA+AGG - Chr1:65341903-65341922 MsG0180003623.01.T01:intron 45.0%
! GACATTTTTACGATGGTCGG+TGG + Chr1:65345422-65345441 None:intergenic 45.0%
! TGGGTTTGTCTCCTGTTTTG+AGG + Chr1:65345367-65345386 None:intergenic 45.0%
!! CGTTTTTGGAGATGTTGGAG+TGG + Chr1:65341007-65341026 None:intergenic 45.0%
!!! TTTTGAAGCTTGCACCTGGT+GGG - Chr1:65341597-65341616 MsG0180003623.01.T01:intron 45.0%
AGAAGGCCAAGGATAGCCTT+GGG - Chr1:65341426-65341445 MsG0180003623.01.T01:intron 50.0%
AGACGATCCGCGAATTTCTG+TGG - Chr1:65345095-65345114 MsG0180003623.01.T01:CDS 50.0%
AGTGGCCATGTCACCTTCAA+CGG + Chr1:65340913-65340932 None:intergenic 50.0%
CAAGCCTTCGGAGAAGAAGA+AGG - Chr1:65341691-65341710 MsG0180003623.01.T01:intron 50.0%
CACGCATGACATCAGGGATT+GGG + Chr1:65340953-65340972 None:intergenic 50.0%
CATGACATCAGGGATTGGGA+GGG + Chr1:65340949-65340968 None:intergenic 50.0%
CCAACAACAAGAGGAAGCTC+AGG + Chr1:65341329-65341348 None:intergenic 50.0%
CGCGGATCGTCTAGAGAAAA+TGG + Chr1:65345087-65345106 None:intergenic 50.0%
GCAGAATCGCCAACAACAAG+AGG + Chr1:65341338-65341357 None:intergenic 50.0%
GCTCAGGAACAGTTTCGATC+CGG + Chr1:65341313-65341332 None:intergenic 50.0%
GCTTCTTCCTGGGAATGAAC+AGG + Chr1:65343236-65343255 None:intergenic 50.0%
GTGGACGAAGTTGACGATGT+CGG + Chr1:65340988-65341007 None:intergenic 50.0%
GTTACCGAAAGCAGCTTGTC+CGG + Chr1:65341147-65341166 None:intergenic 50.0%
GTTGTTGGCGATTCTGCTGA+AGG - Chr1:65341341-65341360 MsG0180003623.01.T01:intron 50.0%
TCAAGGCTGCAGGAAAAGCA+TGG - Chr1:65343264-65343283 MsG0180003623.01.T01:intron 50.0%
TGGACGAAGTTGACGATGTC+GGG + Chr1:65340987-65341006 None:intergenic 50.0%
TGTGCTTCCTAGGGCTAAGA+TGG - Chr1:65341718-65341737 MsG0180003623.01.T01:intron 50.0%
TTTGAGTGGGGCTAAAGGTG+TGG + Chr1:65343578-65343597 None:intergenic 50.0%
! AAGGCTATCCTTGGCCTTCT+CGG + Chr1:65341426-65341445 None:intergenic 50.0%
! CCTGAGCTTCCTCTTGTTGT+TGG - Chr1:65341326-65341345 MsG0180003623.01.T01:intron 50.0%
! TGGTCGGTGGAGCTATTTCA+AGG + Chr1:65345409-65345428 None:intergenic 50.0%
!! ACGGGCGTTTTTGGAGATGT+TGG + Chr1:65341012-65341031 None:intergenic 50.0%
!! CCCGACATTGCGTTTGTTGT+TGG + Chr1:65345541-65345560 None:intergenic 50.0%
!!! CTTTTGAAGCTTGCACCTGG+TGG - Chr1:65341596-65341615 MsG0180003623.01.T01:intron 50.0%
AAGGGAGGAAGCAGCACACA+TGG + Chr1:65343124-65343143 None:intergenic 55.0%
ACGGATCCCAAGGCTATCCT+TGG + Chr1:65341435-65341454 None:intergenic 55.0%
AGCTTACCCTGATGCCGAGA+AGG - Chr1:65341409-65341428 MsG0180003623.01.T01:intron 55.0%
ATGGCTGCACGCATGACATC+AGG + Chr1:65340960-65340979 None:intergenic 55.0%
CATTTACGCCAGATCCGGGT+AGG + Chr1:65341197-65341216 None:intergenic 55.0%
CCACACCGTTGAAGGTGACA+TGG - Chr1:65340905-65340924 MsG0180003623.01.T01:intron 55.0%
CCACGAGCGAGAACAAGTGA+AGG + Chr1:65341287-65341306 None:intergenic 55.0%
CCATGTCACCTTCAACGGTG+TGG + Chr1:65340908-65340927 None:intergenic 55.0%
CCTTCACTTGTTCTCGCTCG+TGG - Chr1:65341284-65341303 MsG0180003623.01.T01:intron 55.0%
CGAAGTTGACGATGTCGGGA+CGG + Chr1:65340983-65341002 None:intergenic 55.0%
CTACCCGGATCTGGCGTAAA+TGG - Chr1:65341195-65341214 MsG0180003623.01.T01:intron 55.0%
CTTCACGGCTTTCGCTCCTT+CGG + Chr1:65341525-65341544 None:intergenic 55.0%
CTTGGGATCCGTCCTGGAAA+AGG - Chr1:65341443-65341462 MsG0180003623.01.T01:intron 55.0%
GAGAAGGCCAAGGATAGCCT+TGG - Chr1:65341425-65341444 MsG0180003623.01.T01:intron 55.0%
GAGCAAACATGCGACCACCA+CGG + Chr1:65341175-65341194 None:intergenic 55.0%
GCACGCATGACATCAGGGAT+TGG + Chr1:65340954-65340973 None:intergenic 55.0%
GCATGACATCAGGGATTGGG+AGG + Chr1:65340950-65340969 None:intergenic 55.0%
GCTACTGCTATCAAGGCTGC+AGG - Chr1:65343254-65343273 MsG0180003623.01.T01:intron 55.0%
GCTTTCGGTAACATGTGCCG+TGG - Chr1:65341155-65341174 MsG0180003623.01.T01:intron 55.0%
GTCACTGTCCACACCGTTGA+AGG - Chr1:65340897-65340916 MsG0180003623.01.T01:intron 55.0%
GTCGCATGTTTGCTCCTACC+CGG - Chr1:65341180-65341199 MsG0180003623.01.T01:intron 55.0%
TGGCTGCACGCATGACATCA+GGG + Chr1:65340959-65340978 None:intergenic 55.0%
TGTTTGCTCCTACCCGGATC+TGG - Chr1:65341186-65341205 MsG0180003623.01.T01:intron 55.0%
TTCGGTAACATGTGCCGTGG+TGG - Chr1:65341158-65341177 MsG0180003623.01.T01:intron 55.0%
TTGTTCTCGCTCGTGGTCAC+CGG - Chr1:65341291-65341310 MsG0180003623.01.T01:intron 55.0%
! CTTGCACCTGGTGGGCATTT+AGG - Chr1:65341605-65341624 MsG0180003623.01.T01:intron 55.0%
! CTTTTCCAGGACGGATCCCA+AGG + Chr1:65341445-65341464 None:intergenic 55.0%
!! AGGTTTGGTGACCGGCTTTG+CGG + Chr1:65341052-65341071 None:intergenic 55.0%
!! GGTGCCATTTACGCCAGATC+CGG + Chr1:65341202-65341221 None:intergenic 55.0%
!! GTACGGTTGACGGGCGTTTT+TGG + Chr1:65341021-65341040 None:intergenic 55.0%
!! GTGCCATTTACGCCAGATCC+GGG + Chr1:65341201-65341220 None:intergenic 55.0%
ACGGTGTGGACAGTGACGAG+AGG + Chr1:65340894-65340913 None:intergenic 60.0%
ATCAGGGATTGGGAGGGAGG+TGG + Chr1:65340943-65340962 None:intergenic 60.0%
CGAAAGCAGCTTGTCCGGCA+CGG + Chr1:65341142-65341161 None:intergenic 60.0%
CGAAGGAGCGAAAGCCGTGA+AGG - Chr1:65341523-65341542 MsG0180003623.01.T01:intron 60.0%
CTCCGGCAACACGAGGGATA+CGG + Chr1:65341109-65341128 None:intergenic 60.0%
GACATCAGGGATTGGGAGGG+AGG + Chr1:65340946-65340965 None:intergenic 60.0%
GATACGGGAGACAGCACGTC+CGG + Chr1:65341093-65341112 None:intergenic 60.0%
GGGACTCCTTTCGGCCAATG+TGG - Chr1:65344529-65344548 MsG0180003623.01.T01:CDS 60.0%
GTTGACGATGTCGGGACGGA+TGG + Chr1:65340979-65340998 None:intergenic 60.0%
TACCACCTCCGGCAACACGA+GGG + Chr1:65341115-65341134 None:intergenic 60.0%
TCAGGGATTGGGAGGGAGGT+GGG + Chr1:65340942-65340961 None:intergenic 60.0%
TCCCGTATCCCTCGTGTTGC+CGG - Chr1:65341104-65341123 MsG0180003623.01.T01:intron 60.0%
TCCGGCAACACGAGGGATAC+GGG + Chr1:65341108-65341127 None:intergenic 60.0%
! CCTTGGCCTTCTCGGCATCA+GGG + Chr1:65341418-65341437 None:intergenic 60.0%
! CGTGCCGGACAAGCTGCTTT+CGG - Chr1:65341140-65341159 MsG0180003623.01.T01:intron 60.0%
! GATAGCCTTGGGATCCGTCC+TGG - Chr1:65341437-65341456 MsG0180003623.01.T01:intron 60.0%
! TCCTTGGCCTTCTCGGCATC+AGG + Chr1:65341419-65341438 None:intergenic 60.0%
AAGCAGCTTGTCCGGCACGG+TGG + Chr1:65341139-65341158 None:intergenic 65.0%
ACCAAACCTCCGCCGAGTCC+TGG - Chr1:65341063-65341082 MsG0180003623.01.T01:intron 65.0%
ACGTCCGGTACCCCAGGACT+CGG + Chr1:65341078-65341097 None:intergenic 65.0%
AGCAGCTTGTCCGGCACGGT+GGG + Chr1:65341138-65341157 None:intergenic 65.0%
ATCCCTCGTGTTGCCGGAGG+TGG - Chr1:65341110-65341129 MsG0180003623.01.T01:intron 65.0%
CAAACCTCCGCCGAGTCCTG+GGG - Chr1:65341065-65341084 MsG0180003623.01.T01:intron 65.0%
CCAAACCTCCGCCGAGTCCT+GGG - Chr1:65341064-65341083 MsG0180003623.01.T01:intron 65.0%
CCCTGATGCCGAGAAGGCCA+AGG - Chr1:65341415-65341434 MsG0180003623.01.T01:intron 65.0%
CGTATCCCTCGTGTTGCCGG+AGG - Chr1:65341107-65341126 MsG0180003623.01.T01:intron 65.0%
GACGAGAGGACGAGCTGCAG+CGG + Chr1:65340880-65340899 None:intergenic 65.0%
GCTGACGGCGTACGGTTGAC+GGG + Chr1:65341030-65341049 None:intergenic 65.0%
GCTTTGCGGCTGACGGCGTA+CGG + Chr1:65341038-65341057 None:intergenic 65.0%
GGCTGACGGCGTACGGTTGA+CGG + Chr1:65341031-65341050 None:intergenic 65.0%
GTACCACCTCCGGCAACACG+AGG + Chr1:65341116-65341135 None:intergenic 65.0%
TACGCCGTCAGCCGCAAAGC+CGG - Chr1:65341038-65341057 MsG0180003623.01.T01:intron 65.0%
! GTGACCGGCTTTGCGGCTGA+CGG + Chr1:65341045-65341064 None:intergenic 65.0%
!! CTCGGCGGAGGTTTGGTGAC+CGG + Chr1:65341060-65341079 None:intergenic 65.0%
!! GAGGGAGGTGGGAGTGTCAG+TGG + Chr1:65340931-65340950 None:intergenic 65.0%
CCCAGGACTCGGCGGAGGTT+TGG + Chr1:65341067-65341086 None:intergenic 70.0%
GACAGCACGTCCGGTACCCC+AGG + Chr1:65341084-65341103 None:intergenic 70.0%
GAGAGGACGAGCTGCAGCGG+CGG + Chr1:65340877-65340896 None:intergenic 70.0%
GGAGGTGGTACCCACCGTGC+CGG - Chr1:65341125-65341144 MsG0180003623.01.T01:intron 70.0%
GGCACGGTGGGTACCACCTC+CGG + Chr1:65341126-65341145 None:intergenic 70.0%
TCCGCCGAGTCCTGGGGTAC+CGG - Chr1:65341071-65341090 MsG0180003623.01.T01:intron 70.0%
TCCGGTACCCCAGGACTCGG+CGG + Chr1:65341075-65341094 None:intergenic 70.0%
GGTACCCCAGGACTCGGCGG+AGG + Chr1:65341072-65341091 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
Chr1 gene 65340815 65345671 65340815 ID=MsG0180003623.01;Name=MsG0180003623.01
Chr1 mRNA 65340815 65345671 65340815 ID=MsG0180003623.01.T01;Parent=MsG0180003623.01;Name=MsG0180003623.01.T01;_AED=0.43;_eAED=0.43;_QI=55|1|1|1|0.5|0.33|3|261|406
Chr1 exon 65340815 65340884 65340815 ID=MsG0180003623.01.T01:exon:50624;Parent=MsG0180003623.01.T01
Chr1 exon 65342934 65343238 65342934 ID=MsG0180003623.01.T01:exon:50623;Parent=MsG0180003623.01.T01
Chr1 five_prime_UTR 65345617 65345671 65345617 ID=MsG0180003623.01.T01:five_prime_utr;Parent=MsG0180003623.01.T01
Chr1 CDS 65344510 65345616 65344510 ID=MsG0180003623.01.T01:cds;Parent=MsG0180003623.01.T01
Chr1 CDS 65343125 65343238 65343125 ID=MsG0180003623.01.T01:cds;Parent=MsG0180003623.01.T01
Chr1 three_prime_UTR 65342934 65343124 65342934 ID=MsG0180003623.01.T01:three_prime_utr;Parent=MsG0180003623.01.T01
Chr1 three_prime_UTR 65340815 65340884 65340815 ID=MsG0180003623.01.T01:three_prime_utr;Parent=MsG0180003623.01.T01
Chr1 mRNA 65342894 65345671 65342894 ID=MsG0180003623.01.T02;Parent=MsG0180003623.01;Name=MsG0180003623.01.T02;_AED=0.44;_eAED=0.44;_QI=55|1|1|1|1|1|2|231|406
Chr1 exon 65342894 65343238 65342894 ID=MsG0180003623.01.T02:exon:50625;Parent=MsG0180003623.01.T02
Chr1 five_prime_UTR 65345617 65345671 65345617 ID=MsG0180003623.01.T02:five_prime_utr;Parent=MsG0180003623.01.T02
Chr1 CDS 65344510 65345616 65344510 ID=MsG0180003623.01.T02:cds;Parent=MsG0180003623.01.T02
Chr1 CDS 65343125 65343238 65343125 ID=MsG0180003623.01.T02:cds;Parent=MsG0180003623.01.T02
Chr1 three_prime_UTR 65342894 65343124 65342894 ID=MsG0180003623.01.T02:three_prime_utr;Parent=MsG0180003623.01.T02
Gene Sequence

>MsG0180003623.01.T02

ATGGCCGCCGCTGCAGCTCGTCCTCTCGTCACTGTCCACACCGTTGAAGGTGACATGGCCACTGACACTCCCACCTCCCTCCCAATCCCTGATGTCATGCGTGCAGCCATCCGTCCCGACATCGTCAACTTCGTCCACTCCAACATCTCCAAAAACGCCCGTCAACCGTACGCCGTCAGCCGCAAAGCCGGTCACCAAACCTCCGCCGAGTCCTGGGGTACCGGACGTGCTGTCTCCCGTATCCCTCGTGTTGCCGGAGGTGGTACCCACCGTGCCGGACAAGCTGCTTTCGGTAACATGTGCCGTGGTGGTCGCATGTTTGCTCCTACCCGGATCTGGCGTAAATGGCACCGTAAAATCAATGTGAATCAGAAGCGTTACGCTGTTGTTTCAGCTATAGCTGCTTCTGCTATTCCTTCACTTGTTCTCGCTCGTGGTCACCGGATCGAAACTGTTCCTGAGCTTCCTCTTGTTGTTGGCGATTCTGCTGAAGGTGTTGAGAAGACTAAGGAAGCGATCAAGCTTTTGAAATCAATTGGAGCTTACCCTGATGCCGAGAAGGCCAAGGATAGCCTTGGGATCCGTCCTGGAAAAGGTAAAATGCGTAACCGTAGGTATATCTCTCGTAAGGGTCCTTTGATTGTTTATGGTACCGAAGGAGCGAAAGCCGTGAAGGCTTTTCGCAATATTCCTGGTGTTGATATCACCAATGTTGAAAGGTTGAATCTTTTGAAGCTTGCACCTGGTGGGCATTTAGGAAGATTTGTGATTTGGACTAAGACTGCTTTCGAGAAGTTGGATTCCATTTATGGTTCTTTTGACAAGCCTTCGGAGAAGAAGAAGGGTTATGTGCTTCCTAGGGCTAAGATGGTGAATTCTGATTTGACTAGGATTATTAACTCTGATGAGATTCAGAGTGTTGTTAGGCCTGTGAAGAAGGATGTGAAGAGGGCCACTTTGAAGAAGAATCCTTTGAAGAATCTCAATGTTATGTTGAGGCTTAATCCTTATGCTAAGACTGCTAAGAGGATGGCTTTGCTTGCTGAAGCTGAAAGGGTTAAGTCCAAGAAGGAAAAGCTTGATAAGAAGAGGAAGACTGTCTCTAAGGAAGAAGCTACTGCTATCAAGGCTGCAGGAAAAGCATGGTACAATACTATGGTGTCAGATTCTGATTACACAGAATTCGACAACTTCTCCAAATGGTTGGGTGTCTCACAATGA

>MsG0180003623.01.T01

ATGGCCGCCGCTGCAGCTCGTCCTCTCGTCACTGTCCACACCGTTGAAGGTGACATGGCCACTGACACTCCCACCTCCCTCCCAATCCCTGATGTCATGCGTGCAGCCATCCGTCCCGACATCGTCAACTTCGTCCACTCCAACATCTCCAAAAACGCCCGTCAACCGTACGCCGTCAGCCGCAAAGCCGGTCACCAAACCTCCGCCGAGTCCTGGGGTACCGGACGTGCTGTCTCCCGTATCCCTCGTGTTGCCGGAGGTGGTACCCACCGTGCCGGACAAGCTGCTTTCGGTAACATGTGCCGTGGTGGTCGCATGTTTGCTCCTACCCGGATCTGGCGTAAATGGCACCGTAAAATCAATGTGAATCAGAAGCGTTACGCTGTTGTTTCAGCTATAGCTGCTTCTGCTATTCCTTCACTTGTTCTCGCTCGTGGTCACCGGATCGAAACTGTTCCTGAGCTTCCTCTTGTTGTTGGCGATTCTGCTGAAGGTGTTGAGAAGACTAAGGAAGCGATCAAGCTTTTGAAATCAATTGGAGCTTACCCTGATGCCGAGAAGGCCAAGGATAGCCTTGGGATCCGTCCTGGAAAAGGTAAAATGCGTAACCGTAGGTATATCTCTCGTAAGGGTCCTTTGATTGTTTATGGTACCGAAGGAGCGAAAGCCGTGAAGGCTTTTCGCAATATTCCTGGTGTTGATATCACCAATGTTGAAAGGTTGAATCTTTTGAAGCTTGCACCTGGTGGGCATTTAGGAAGATTTGTGATTTGGACTAAGACTGCTTTCGAGAAGTTGGATTCCATTTATGGTTCTTTTGACAAGCCTTCGGAGAAGAAGAAGGGTTATGTGCTTCCTAGGGCTAAGATGGTGAATTCTGATTTGACTAGGATTATTAACTCTGATGAGATTCAGAGTGTTGTTAGGCCTGTGAAGAAGGATGTGAAGAGGGCCACTTTGAAGAAGAATCCTTTGAAGAATCTCAATGTTATGTTGAGGCTTAATCCTTATGCTAAGACTGCTAAGAGGATGGCTTTGCTTGCTGAAGCTGAAAGGGTTAAGTCCAAGAAGGAAAAGCTTGATAAGAAGAGGAAGACTGTCTCTAAGGAAGAAGCTACTGCTATCAAGGCTGCAGGAAAAGCATGGTACAATACTATGGTGTCAGATTCTGATTACACAGAATTCGACAACTTCTCCAAATGGTTGGGTGTCTCACAATGA
Protein sequence

>MsG0180003623.01.T02

MAAAAARPLVTVHTVEGDMATDTPTSLPIPDVMRAAIRPDIVNFVHSNISKNARQPYAVSRKAGHQTSAESWGTGRAVSRIPRVAGGGTHRAGQAAFGNMCRGGRMFAPTRIWRKWHRKINVNQKRYAVVSAIAASAIPSLVLARGHRIETVPELPLVVGDSAEGVEKTKEAIKLLKSIGAYPDAEKAKDSLGIRPGKGKMRNRRYISRKGPLIVYGTEGAKAVKAFRNIPGVDITNVERLNLLKLAPGGHLGRFVIWTKTAFEKLDSIYGSFDKPSEKKKGYVLPRAKMVNSDLTRIINSDEIQSVVRPVKKDVKRATLKKNPLKNLNVMLRLNPYAKTAKRMALLAEAERVKSKKEKLDKKRKTVSKEEATAIKAAGKAWYNTMVSDSDYTEFDNFSKWLGVSQ*

>MsG0180003623.01.T01

MAAAAARPLVTVHTVEGDMATDTPTSLPIPDVMRAAIRPDIVNFVHSNISKNARQPYAVSRKAGHQTSAESWGTGRAVSRIPRVAGGGTHRAGQAAFGNMCRGGRMFAPTRIWRKWHRKINVNQKRYAVVSAIAASAIPSLVLARGHRIETVPELPLVVGDSAEGVEKTKEAIKLLKSIGAYPDAEKAKDSLGIRPGKGKMRNRRYISRKGPLIVYGTEGAKAVKAFRNIPGVDITNVERLNLLKLAPGGHLGRFVIWTKTAFEKLDSIYGSFDKPSEKKKGYVLPRAKMVNSDLTRIINSDEIQSVVRPVKKDVKRATLKKNPLKNLNVMLRLNPYAKTAKRMALLAEAERVKSKKEKLDKKRKTVSKEEATAIKAAGKAWYNTMVSDSDYTEFDNFSKWLGVSQ*