AlfalfaGEDB | MsG0280006301.01

M. sativa cultivar ZhongmuNo.1 / MsG0280006301.01

KEGG: K03233
GO: GO:0003746 GO:0005515 GO:0006414
PFAM: PF00043 PF00647 PF02798

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0280006301.01.T01	XP_003592901.1	98.309	414	7	0	14	427	5	418	0	845
MsG0280006301.01.T02	XP_003592901.1	98.309	414	7	0	14	427	5	418	0	845

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0280006301.01.T01	Q9FUM1	78.571	420	83	4	14	427	4	422	0	651
MsG0280006301.01.T02	Q9FUM1	78.571	420	83	4	14	427	4	422	0	651

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0280006301.01.T01	Q1SL16	98.309	414	7	0	14	427	5	418	0.0	845
MsG0280006301.01.T02	Q1SL16	98.309	414	7	0	14	427	5	418	0.0	845

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0080048040.01	MsG0280006301.01	0.885965	5.156794e-72	3.612554e-68
MsG0080048922.01	MsG0280006301.01	0.830558	2.745235e-55	2.902309e-52
MsG0180000096.01	MsG0280006301.01	0.865650	5.063235e-65	1.660104e-61
MsG0180000118.01	MsG0280006301.01	0.839548	1.483879e-57	2.055927e-54
MsG0180001169.01	MsG0280006301.01	0.911925	3.499047e-83	7.675115e-79
MsG0180001615.01	MsG0280006301.01	-0.805550	1.264798e-49	6.710476e-47
MsG0180001829.01	MsG0280006301.01	0.805264	1.451769e-49	7.645981e-47
MsG0180002738.01	MsG0280006301.01	0.888063	8.226093e-73	6.275049e-69
MsG0180003258.01	MsG0280006301.01	0.835237	1.886555e-56	2.293229e-53
MsG0180003503.01	MsG0280006301.01	-0.805109	1.564328e-49	8.206464e-47
MsG0180003585.01	MsG0280006301.01	0.870052	1.952716e-66	7.491930e-63
MsG0180003623.01	MsG0280006301.01	0.814367	1.597013e-51	1.069535e-48
MsG0180003897.01	MsG0280006301.01	0.848121	7.499999e-60	1.362103e-56
MsG0180004064.01	MsG0280006301.01	0.845012	5.293167e-59	8.701763e-56
MsG0180004503.01	MsG0280006301.01	0.885451	8.039430e-72	5.520966e-68
MsG0180004828.01	MsG0280006301.01	0.815306	9.892672e-52	6.795659e-49
MsG0180005384.01	MsG0280006301.01	0.856338	3.443158e-62	8.191040e-59
MsG0180005573.01	MsG0280006301.01	0.846502	2.085815e-59	3.597965e-56
MsG0180005819.01	MsG0280006301.01	0.823962	1.044222e-53	9.125684e-51
MsG0280006301.01	MsG0280006629.01	0.827134	1.849593e-54	1.769780e-51
MsG0280006301.01	MsG0280006717.01	0.841630	4.230270e-58	6.253134e-55
MsG0280006301.01	MsG0280006747.01	0.877335	6.823812e-69	3.418632e-65
MsG0280006301.01	MsG0280007055.01	0.868703	5.363137e-66	1.958956e-62
MsG0280006301.01	MsG0280007084.01	0.865975	3.997463e-65	1.325629e-61
MsG0280006301.01	MsG0280007606.01	0.883675	3.669756e-71	2.349773e-67
MsG0280006301.01	MsG0280008263.01	0.811374	7.229828e-51	4.467711e-48
MsG0280006301.01	MsG0280010232.01	0.820723	5.900776e-53	4.705809e-50
MsG0280006301.01	MsG0280010519.01	0.862878	3.709477e-64	1.103234e-60
MsG0280006301.01	MsG0280010994.01	-0.803887	2.812382e-49	1.429784e-46
MsG0280006301.01	MsG0380014507.01	0.808419	3.126166e-50	1.786597e-47
MsG0280006301.01	MsG0380015402.01	0.811890	5.584182e-51	3.497989e-48
MsG0280006301.01	MsG0380015446.01	0.877217	7.502384e-69	3.742645e-65
MsG0280006301.01	MsG0380015857.01	0.908421	1.741412e-81	3.229295e-77
MsG0280006301.01	MsG0380016031.01	0.832370	9.826419e-56	1.096075e-52
MsG0280006301.01	MsG0380016246.01	0.829830	4.133429e-55	4.279808e-52
MsG0280006301.01	MsG0380016678.01	0.862650	4.361067e-64	1.286554e-60
MsG0280006301.01	MsG0380016732.01	0.802045	6.759073e-49	3.277870e-46
MsG0280006301.01	MsG0380016744.01	0.893946	3.911633e-75	3.808866e-71
MsG0280006301.01	MsG0380016760.01	0.900915	4.541315e-78	5.990242e-74
MsG0280006301.01	MsG0380016805.01	0.860487	1.995540e-63	5.464217e-60
MsG0280006301.01	MsG0380017155.01	0.823789	1.146153e-53	9.968178e-51
MsG0280006301.01	MsG0380017156.01	0.853806	1.873474e-61	4.097845e-58
MsG0280006301.01	MsG0380017385.01	-0.800885	1.168349e-48	5.502442e-46
MsG0280006301.01	MsG0380017483.01	0.837004	6.713620e-57	8.606092e-54
MsG0280006301.01	MsG0380017516.01	0.849825	2.521767e-60	4.841134e-57
MsG0280006301.01	MsG0380017826.01	0.840088	1.073064e-57	1.512237e-54
MsG0280006301.01	MsG0380018056.01	0.862528	4.755593e-64	1.397098e-60
MsG0280006301.01	MsG0480018164.01	0.844885	5.728585e-59	9.379131e-56
MsG0280006301.01	MsG0480019165.01	0.829051	6.388672e-55	6.464127e-52
MsG0280006301.01	MsG0480019604.01	-0.810026	1.414273e-50	8.433933e-48
MsG0280006301.01	MsG0480020796.01	0.890995	5.945234e-74	5.118191e-70
MsG0280006301.01	MsG0480020911.01	0.873147	1.840970e-67	7.906439e-64
MsG0280006301.01	MsG0480021279.01	0.852943	3.311785e-61	7.036813e-58
MsG0280006301.01	MsG0480021288.01	0.828179	1.038308e-54	1.024306e-51
MsG0280006301.01	MsG0480021417.01	0.870048	1.958280e-66	7.512046e-63
MsG0280006301.01	MsG0480021985.01	0.801602	8.335179e-49	3.996812e-46
MsG0280006301.01	MsG0480022006.01	0.903411	3.566968e-79	5.274552e-75
MsG0280006301.01	MsG0480022224.01	0.817063	4.005353e-52	2.887135e-49
MsG0280006301.01	MsG0480022302.01	0.811313	7.451616e-51	4.597169e-48
MsG0280006301.01	MsG0480022363.01	0.837813	4.164018e-57	5.472181e-54
MsG0280006301.01	MsG0480022955.01	0.894882	1.622873e-75	1.643904e-71
MsG0280006301.01	MsG0480023380.01	0.889396	2.515518e-73	2.026014e-69
MsG0280006301.01	MsG0480023386.01	-0.809414	1.914800e-50	1.123562e-47
MsG0280006301.01	MsG0480023774.01	0.886034	4.856379e-72	3.411839e-68
MsG0280006301.01	MsG0480023931.01	0.868487	6.295169e-66	2.281191e-62
MsG0280006301.01	MsG0480023996.01	0.926724	3.164737e-91	1.517796e-86
MsG0280006301.01	MsG0580024481.01	0.809495	1.840017e-50	1.081931e-47
MsG0280006301.01	MsG0580024540.01	0.827782	1.293612e-54	1.261321e-51
MsG0280006301.01	MsG0580024738.01	0.872846	2.322442e-67	9.863808e-64
MsG0280006301.01	MsG0580024894.01	0.920532	1.135883e-87	3.871283e-83
MsG0280006301.01	MsG0580025750.01	0.817543	3.123214e-52	2.281084e-49
MsG0280006301.01	MsG0580026029.01	0.872836	2.340550e-67	9.936925e-64
MsG0280006301.01	MsG0580026749.01	0.856208	3.756948e-62	8.898570e-59
MsG0280006301.01	MsG0580028107.01	0.824641	7.229680e-54	6.442074e-51
MsG0280006301.01	MsG0580029047.01	0.825962	3.520791e-54	3.257559e-51
MsG0280006301.01	MsG0580029157.01	0.848371	6.394480e-60	1.170970e-56
MsG0280006301.01	MsG0680031368.01	0.857807	1.268746e-62	3.170045e-59
MsG0280006301.01	MsG0680032459.01	0.913904	3.581617e-84	8.665677e-80
MsG0280006301.01	MsG0680035611.01	0.831763	1.388160e-55	1.521177e-52
MsG0280006301.01	MsG0780036015.01	0.852848	3.527169e-61	7.470781e-58
MsG0280006301.01	MsG0780036859.01	0.839237	1.787190e-57	2.452857e-54
MsG0280006301.01	MsG0780038383.01	0.829184	5.934025e-55	6.028614e-52
MsG0280006301.01	MsG0780039937.01	0.846155	2.594283e-59	4.424171e-56
MsG0280006301.01	MsG0780040174.01	0.843928	1.036093e-58	1.646354e-55
MsG0280006301.01	MsG0780040660.01	0.824339	8.518393e-54	7.523280e-51
MsG0280006301.01	MsG0780041076.01	0.841287	5.207059e-58	7.614395e-55
MsG0280006301.01	MsG0780041240.01	0.848951	4.418098e-60	8.244271e-57
MsG0280006301.01	MsG0780041311.01	0.868500	6.234853e-66	2.260467e-62
MsG0280006301.01	MsG0780041522.01	0.853895	1.765214e-61	3.872612e-58
MsG0280006301.01	MsG0780041790.01	0.849423	3.264651e-60	6.185393e-57
MsG0280006301.01	MsG0880041941.01	0.807803	4.228279e-50	2.377568e-47
MsG0280006301.01	MsG0880042517.01	0.825077	5.707195e-54	5.149051e-51
MsG0280006301.01	MsG0880042896.01	0.804686	1.917652e-49	9.950976e-47
MsG0280006301.01	MsG0880043076.01	0.927381	1.272367e-91	6.331821e-87
MsG0280006301.01	MsG0880044061.01	0.809270	2.055898e-50	1.201697e-47
MsG0280006301.01	MsG0880044204.01	0.903455	3.407145e-79	5.047992e-75
MsG0280006301.01	MsG0880045761.01	-0.816536	5.256374e-52	3.734571e-49
MsG0280006301.01	MsG0880045836.01	0.882718	8.236726e-71	5.071140e-67
MsG0280006301.01	MsG0880046220.01	0.808352	3.230351e-50	1.842946e-47
MsG0280006301.01	MsG0880046243.01	0.805390	1.366186e-49	7.218749e-47
MsG0280006301.01	MsG0880046486.01	0.834292	3.261086e-56	3.853298e-53
MsG0280006301.01	MsG0880046760.01	0.808269	3.364899e-50	1.915539e-47
MsG0280006301.01	MsG0880047090.01	0.879869	8.757971e-70	4.827429e-66
MsG0280006301.01	MsG0880047146.01	0.814574	1.437550e-51	9.681470e-49
MsG0280006301.01	MsG0880047310.01	0.874326	7.368900e-68	3.303057e-64
MsG0280006301.01	MsG0880047660.01	-0.816778	4.640818e-52	3.319126e-49

PPI

Gene1	Gene2	Type
MsG0280006301.01	MsG0380014534.01	PPI
MsG0280006301.01	MsG0280006301.01	PPI
MsG0380014534.01	MsG0280006301.01	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0280006301.01.T01	MTR_2g005570	98.309	414	7	0	14	427	5	418	0.0	845
MsG0280006301.01.T01	MTR_2g005570	98.068	414	8	0	14	427	5	418	0.0	844
MsG0280006301.01.T01	MTR_3g058940	88.729	417	43	3	14	427	4	419	0.0	764
MsG0280006301.01.T01	MTR_4g134770	82.734	417	68	3	14	427	4	419	0.0	673
MsG0280006301.01.T01	MTR_4g134770	84.635	384	56	2	47	427	1	384	0.0	636
MsG0280006301.01.T01	MTR_3g064700	30.233	172	107	6	51	212	40	208	5.62e-13	68.2
MsG0280006301.01.T01	MTR_3g450790	25.714	175	113	4	51	213	39	208	1.29e-11	64.3
MsG0280006301.01.T01	MTR_1g088850	27.014	211	125	5	22	214	11	210	1.36e-11	64.3
MsG0280006301.01.T02	MTR_2g005570	98.309	414	7	0	14	427	5	418	0.0	845
MsG0280006301.01.T02	MTR_2g005570	98.068	414	8	0	14	427	5	418	0.0	844
MsG0280006301.01.T02	MTR_3g058940	88.729	417	43	3	14	427	4	419	0.0	764
MsG0280006301.01.T02	MTR_4g134770	82.734	417	68	3	14	427	4	419	0.0	673
MsG0280006301.01.T02	MTR_4g134770	84.635	384	56	2	47	427	1	384	0.0	636
MsG0280006301.01.T02	MTR_3g064700	30.233	172	107	6	51	212	40	208	5.62e-13	68.2
MsG0280006301.01.T02	MTR_3g450790	25.714	175	113	4	51	213	39	208	1.29e-11	64.3
MsG0280006301.01.T02	MTR_1g088850	27.014	211	125	5	22	214	11	210	1.36e-11	64.3

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0280006301.01.T01	AT1G09640	76.202	416	92	4	14	427	4	414	0.0	637
MsG0280006301.01.T01	AT1G57720	75.000	408	97	4	21	427	10	413	0.0	623
MsG0280006301.01.T01	AT1G57720	75.000	408	97	4	21	427	10	413	0.0	623
MsG0280006301.01.T01	AT1G09640	68.812	202	61	2	14	214	4	204	4.91e-95	286
MsG0280006301.01.T01	AT1G09640	86.301	73	9	1	356	427	193	265	1.68e-35	132
MsG0280006301.01.T01	AT2G30870	30.075	133	84	3	47	171	35	166	1.07e-12	67.4
MsG0280006301.01.T01	AT2G30860	29.371	143	94	2	36	171	24	166	1.94e-12	66.6
MsG0280006301.01.T01	AT3G62760	28.141	199	128	6	25	212	14	208	3.26e-12	66.2
MsG0280006301.01.T01	AT5G17220	35.659	129	74	3	51	171	40	167	1.84e-11	63.9
MsG0280006301.01.T02	AT1G09640	76.202	416	92	4	14	427	4	414	0.0	637
MsG0280006301.01.T02	AT1G57720	75.000	408	97	4	21	427	10	413	0.0	623
MsG0280006301.01.T02	AT1G57720	75.000	408	97	4	21	427	10	413	0.0	623
MsG0280006301.01.T02	AT1G09640	68.812	202	61	2	14	214	4	204	4.91e-95	286
MsG0280006301.01.T02	AT1G09640	86.301	73	9	1	356	427	193	265	1.68e-35	132
MsG0280006301.01.T02	AT2G30870	30.075	133	84	3	47	171	35	166	1.07e-12	67.4
MsG0280006301.01.T02	AT2G30860	29.371	143	94	2	36	171	24	166	1.94e-12	66.6
MsG0280006301.01.T02	AT3G62760	28.141	199	128	6	25	212	14	208	3.26e-12	66.2
MsG0280006301.01.T02	AT5G17220	35.659	129	74	3	51	171	40	167	1.84e-11	63.9

Find 42 sgRNAs with CRISPR-Local

Find 270 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CATTCATCCATGATAAATTT+TGG	0.113279	2:-230227	None:intergenic
GTGTTTGATTTGCAGGATTC+TGG	0.117283	2:+229991	MsG0280006301.01.T01:intron
TGGATCAGAGCCTCCATTTA+AGG	0.199866	2:+230169	MsG0280006301.01.T01:CDS
TTTGGAAAGATGCTTATAAT+TGG	0.211636	2:+230149	MsG0280006301.01.T01:CDS
CACAACCCCTTCACCTTAAA+TGG	0.280661	2:-230182	None:intergenic
CTGGCTCGCAAGTATGCTTT+TGG	0.282861	2:+230131	MsG0280006301.01.T01:CDS
ATTTGAGGGAGAGGCTCTTT+TGG	0.299039	2:+230343	MsG0280006301.01.T01:CDS
CAAATTCTATATTTCTCTTT+CGG	0.305227	2:+230551	MsG0280006301.01.T01:three_prime_UTR
TCATCACTATAGCAGAAAAT+AGG	0.351177	2:-230444	None:intergenic
CTATATTTCTCTTTCGGCTT+AGG	0.355049	2:+230557	MsG0280006301.01.T01:three_prime_UTR
TTGTGACCCTGAACAAGGTT+GGG	0.356898	2:+230087	MsG0280006301.01.T01:CDS
TTTAAGTGAAAACTAGTTCC+AGG	0.372383	2:+230377	MsG0280006301.01.T01:exon
CATTTAAGGTGAAGGGGTTG+TGG	0.403530	2:+230183	MsG0280006301.01.T01:CDS
GCTGAAATTTAAATGCTTTG+TGG	0.407613	2:+230495	MsG0280006301.01.T01:three_prime_UTR
TGTTTGATTTGCAGGATTCT+GGG	0.410419	2:+229992	MsG0280006301.01.T01:intron
AGAGATTCCAAAATTTATCA+TGG	0.435888	2:+230220	MsG0280006301.01.T01:CDS
TTTGTGACCCTGAACAAGGT+TGG	0.442505	2:+230086	MsG0280006301.01.T01:CDS
ATCCAGAGGGATACTCTCTC+TGG	0.443260	2:+230024	MsG0280006301.01.T01:CDS
AAATATAGAATTTGTAACTC+TGG	0.457667	2:-230542	None:intergenic
AAAAGAGCCTCTCCCTCAAA+TGG	0.468428	2:-230341	None:intergenic
ATTTCTGCAGAGGATGGATC+TGG	0.469227	2:+230112	MsG0280006301.01.T01:CDS
TGCTGAACCATTTGAGGGAG+AGG	0.491080	2:+230334	MsG0280006301.01.T01:CDS
TGTGACCCTGAACAAGGTTG+GGG	0.494527	2:+230088	MsG0280006301.01.T01:CDS
GAAGATGCTGAACCATTTGA+GGG	0.499250	2:+230329	MsG0280006301.01.T01:CDS
TGAAGATGCTGAACCATTTG+AGG	0.504616	2:+230328	MsG0280006301.01.T01:CDS
TTATGACAAAACCACACTCC+TGG	0.507431	2:-230395	None:intergenic
GAGCCTCCATTTAAGGTGAA+GGG	0.508653	2:+230176	MsG0280006301.01.T01:CDS
AACCAGAGAGAGTATCCCTC+TGG	0.541067	2:-230026	None:intergenic
AGCATCTTCAATCATCTGAC+TGG	0.558457	2:-230315	None:intergenic
AGAGCCTCCATTTAAGGTGA+AGG	0.562476	2:+230175	MsG0280006301.01.T01:CDS
GAAAACTAGTTCCAGGAGTG+TGG	0.576342	2:+230384	MsG0280006301.01.T01:exon
TTCATCAGAGATGTCAACCT+TGG	0.587509	2:-230276	None:intergenic
AGCCTCCATTTAAGGTGAAG+GGG	0.592740	2:+230177	MsG0280006301.01.T01:CDS
CTGGGACATGTATGATCCAG+AGG	0.600612	2:+230010	MsG0280006301.01.T01:CDS
TTGTTTGATTCTCTGAACGA+GGG	0.612831	2:+230593	MsG0280006301.01.T01:three_prime_UTR
TTTGTTTGATTCTCTGAACG+AGG	0.622904	2:+230592	MsG0280006301.01.T01:three_prime_UTR
CATGGATGAATGCTATGACA+TGG	0.631015	2:+230238	MsG0280006301.01.T01:CDS
GTGACCCTGAACAAGGTTGG+GGG	0.650105	2:+230089	MsG0280006301.01.T01:CDS
AACCCCTTCACCTTAAATGG+AGG	0.653598	2:-230179	None:intergenic
ATGACATGGAGCTCTATGAG+TGG	0.662196	2:+230252	MsG0280006301.01.T01:CDS
TGGGACATGTATGATCCAGA+GGG	0.668464	2:+230011	MsG0280006301.01.T01:CDS
GGAGCTCTATGAGTGGACCA+AGG	0.731462	2:+230259	MsG0280006301.01.T01:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AAAACTATAAAAATTAAGTA+AGG	-	Chr2:230690-230709	None:intergenic	10.0%
!!	AATTAAAATAGATTTAATCT+TGG	-	Chr2:228586-228605	None:intergenic	10.0%
!!	TTAAAAAATTTAAGAGTTTA+AGG	-	Chr2:230781-230800	None:intergenic	10.0%
!!!	AAACAAAATTAATTTTAACA+GGG	-	Chr2:230752-230771	None:intergenic	10.0%
!!!	AAGATTAAATCTATTTTAAT+TGG	+	Chr2:228585-228604	MsG0280006301.01.T01:intron	10.0%
!!!	AATAAATGCTTTTTTTTAAA+AGG	-	Chr2:231243-231262	None:intergenic	10.0%
!!!	ATAAGTAAATTTTTTTTTGT+AGG	-	Chr2:230720-230739	None:intergenic	10.0%
!!!	TAAACAAAATTAATTTTAAC+AGG	-	Chr2:230753-230772	None:intergenic	10.0%
!!!	TAAGTAAATTTTTTTTTGTA+GGG	-	Chr2:230719-230738	None:intergenic	10.0%
!!!	TTAAACTCTTAAATTTTTTA+AGG	+	Chr2:230780-230799	MsG0280006301.01.T01:intron	10.0%
!!	AAGCATAAATTAAACAAATT+TGG	+	Chr2:231032-231051	MsG0280006301.01.T01:intron	15.0%
!!	AATGCTATTAAAATTAAGTA+AGG	+	Chr2:231104-231123	MsG0280006301.01.T01:intron	15.0%
!!	ACCATATAATAATAAAACAA+AGG	+	Chr2:228280-228299	MsG0280006301.01.T01:intron	15.0%
!!	AGATATAAGTAACAAAAATA+TGG	+	Chr2:230912-230931	MsG0280006301.01.T01:intron	15.0%
!!	CAATTATATAATATTTGAGT+TGG	+	Chr2:228908-228927	MsG0280006301.01.T01:intron	15.0%
!!	TGAAAAAAAAAAAAACAACA+TGG	-	Chr2:228835-228854	None:intergenic	15.0%
!!!	AATTTTTGCGATATTTTTTT+CGG	+	Chr2:230947-230966	MsG0280006301.01.T01:intron	15.0%
!!!	TATCCTTTTTGATATTTATT+GGG	+	Chr2:228540-228559	MsG0280006301.01.T01:intron	15.0%
!!!	TTTTTCAACAATTTTTTTAC+AGG	-	Chr2:231001-231020	None:intergenic	15.0%
!!	AAAACATTTGTGAATAATTG+AGG	-	Chr2:228934-228953	None:intergenic	20.0%
!!	AAATATAGAATTTGTAACTC+TGG	-	Chr2:230545-230564	None:intergenic	20.0%
!!	AAGAAAGAAGAATAAAAGTA+CGG	-	Chr2:231190-231209	None:intergenic	20.0%
!!	AGTTAGCTAATAATCAATTA+AGG	+	Chr2:231414-231433	MsG0280006301.01.T02:intron	20.0%
!!	ATATTAAGAACGCTATTAAA+AGG	-	Chr2:230977-230996	None:intergenic	20.0%
!!	CAAATTCTATATTTCTCTTT+CGG	+	Chr2:230551-230570	MsG0280006301.01.T01:three_prime_UTR	20.0%
!!	TAGACACAAATTTCAAAAAA+GGG	-	Chr2:229054-229073	None:intergenic	20.0%
!!	TATATATAAACCACATACAA+GGG	-	Chr2:228620-228639	None:intergenic	20.0%
!!	TGAAAAAAAAAAGAAACTAC+AGG	-	Chr2:229821-229840	None:intergenic	20.0%
!!	TGTGTTTATCATAGAAAAAA+GGG	+	Chr2:230616-230635	MsG0280006301.01.T01:three_prime_UTR	20.0%
!!	TTAGACACAAATTTCAAAAA+AGG	-	Chr2:229055-229074	None:intergenic	20.0%
!!	TTTCCCAATAAATATCAAAA+AGG	-	Chr2:228546-228565	None:intergenic	20.0%
!!!	AAAAGGGTTAAATATGTTTT+TGG	+	Chr2:230632-230651	MsG0280006301.01.T01:three_prime_UTR	20.0%
!!!	AATATACTATTCTCTGTTTT+TGG	+	Chr2:229888-229907	MsG0280006301.01.T01:intron	20.0%
!!!	CAATTTTAATCCTTATTTGA+TGG	-	Chr2:231342-231361	None:intergenic	20.0%
!!!	GCCTTTGTTTTATTATTATA+TGG	-	Chr2:228284-228303	None:intergenic	20.0%
!!!	GTATCCTTTTTGATATTTAT+TGG	+	Chr2:228539-228558	MsG0280006301.01.T01:intron	20.0%
!!!	TATTTGAATTTTGTTGTTTC+AGG	+	Chr2:228696-228715	MsG0280006301.01.T01:intron	20.0%
!!!	TCTTTCTTCATTTTCATTTT+TGG	+	Chr2:231202-231221	MsG0280006301.01.T01:intron	20.0%
!!!	TTTTACTTCGAAATGATATT+GGG	+	Chr2:231153-231172	MsG0280006301.01.T01:intron	20.0%
!!!	TTTTCTGAAATCAATTAGTT+TGG	+	Chr2:228950-228969	MsG0280006301.01.T01:intron	20.0%
!	AAACAAATTTGGATTGAGTA+AGG	+	Chr2:231043-231062	MsG0280006301.01.T01:intron	25.0%
!	AAATTGAATAAACTTCGTGT+AGG	+	Chr2:231356-231375	MsG0280006301.01.T02:intron	25.0%
!	AAGGGAAAATATTCAGTAAA+AGG	-	Chr2:229259-229278	None:intergenic	25.0%
!	AATTAGAGAAAAAGTAAGTG+TGG	-	Chr2:228460-228479	None:intergenic	25.0%
!	AGAGAATAGTATATTTCCAA+AGG	-	Chr2:229883-229902	None:intergenic	25.0%
!	AGAGATTCCAAAATTTATCA+TGG	+	Chr2:230220-230239	MsG0280006301.01.T01:CDS	25.0%
!	AGGGAAAATATTCAGTAAAA+GGG	-	Chr2:229258-229277	None:intergenic	25.0%
!	CTATATATAAACCACATACA+AGG	-	Chr2:228621-228640	None:intergenic	25.0%
!	GTATGTGGTTTATATATAGA+GGG	+	Chr2:228622-228641	MsG0280006301.01.T01:intron	25.0%
!	GTGTGTTTATCATAGAAAAA+AGG	+	Chr2:230615-230634	MsG0280006301.01.T01:three_prime_UTR	25.0%
!	TAATAATCAACAACAAGTAG+TGG	-	Chr2:227783-227802	None:intergenic	25.0%
!	TATAATTGCTATCAATACTC+AGG	-	Chr2:228896-228915	None:intergenic	25.0%
!	TATTATTCCTTCTTTCTTTC+AGG	+	Chr2:228035-228054	MsG0280006301.01.T01:intron	25.0%
!	TCAGACACAAATTTCAAAAA+GGG	-	Chr2:229277-229296	None:intergenic	25.0%
!	TGAAATTTGTGTCTAAATGA+AGG	+	Chr2:229059-229078	MsG0280006301.01.T01:intron	25.0%
!	TGAAATTTGTGTCTGAATAA+AGG	+	Chr2:229281-229300	MsG0280006301.01.T01:intron	25.0%
!	TGTATGTGGTTTATATATAG+AGG	+	Chr2:228621-228640	MsG0280006301.01.T01:intron	25.0%
!	TTCAGACACAAATTTCAAAA+AGG	-	Chr2:229278-229297	None:intergenic	25.0%
!	TTTGGAAAGATGCTTATAAT+TGG	+	Chr2:230149-230168	MsG0280006301.01.T01:CDS	25.0%
!!	ATCTAAACTAGAATCTTTTC+TGG	-	Chr2:228425-228444	None:intergenic	25.0%
!!	CAAGTTTAGAACACTATAAA+AGG	+	Chr2:230815-230834	MsG0280006301.01.T01:intron	25.0%
!!	CATTCATCCATGATAAATTT+TGG	-	Chr2:230230-230249	None:intergenic	25.0%
!!	CTTGCTGAATATTTTCAAAA+GGG	-	Chr2:229130-229149	None:intergenic	25.0%
!!	CTTTTACTTCGAAATGATAT+TGG	+	Chr2:231152-231171	MsG0280006301.01.T01:intron	25.0%
!!	TTGCTGAATATTTTCAAAAG+GGG	-	Chr2:229129-229148	None:intergenic	25.0%
!!!	ACTTGCTGAATATTTTCAAA+AGG	-	Chr2:229131-229150	None:intergenic	25.0%
!!!	TATTTCTAGAGTAGTTGATT+TGG	-	Chr2:231443-231462	None:intergenic	25.0%
	AAGTAAGGACTAAACTTAGA+AGG	-	Chr2:230675-230694	None:intergenic	30.0%
	ACAACATCCAACTTGTATAT+TGG	+	Chr2:229414-229433	MsG0280006301.01.T01:CDS	30.0%
	ATAGATTTAATCTTGGCAGT+TGG	-	Chr2:228579-228598	None:intergenic	30.0%
	ATCTCTTCTAACATCTCATA+TGG	+	Chr2:228990-229009	MsG0280006301.01.T01:intron	30.0%
	ATGTTGTTATAATGTCAGCA+AGG	-	Chr2:229401-229420	None:intergenic	30.0%
	CTTACTCTTTCTTTATCAAG+TGG	+	Chr2:231388-231407	MsG0280006301.01.T02:intron	30.0%
	GCTGAAATTTAAATGCTTTG+TGG	+	Chr2:230495-230514	MsG0280006301.01.T01:three_prime_UTR	30.0%
	GGGAAAATATTCAGTAAAAG+GGG	-	Chr2:229257-229276	None:intergenic	30.0%
	TATAGAGGGTAAATTTGCAA+AGG	+	Chr2:228636-228655	MsG0280006301.01.T01:intron	30.0%
	TCATCACTATAGCAGAAAAT+AGG	-	Chr2:230447-230466	None:intergenic	30.0%
	TCATCCAAAATCATCTTACT+TGG	-	Chr2:229726-229745	None:intergenic	30.0%
	TGATTGTAGCTTATATCCTT+TGG	+	Chr2:229864-229883	MsG0280006301.01.T01:intron	30.0%
	TGTTGTTATAATGTCAGCAA+GGG	-	Chr2:229400-229419	None:intergenic	30.0%
	TTGCATATAGCCATCAAATA+AGG	+	Chr2:231329-231348	MsG0280006301.01.T02:intron	30.0%
	TTTAAGTGAAAACTAGTTCC+AGG	+	Chr2:230377-230396	MsG0280006301.01.T01:exon	30.0%
	TTTATCAACATGAACCCTAT+TGG	+	Chr2:227945-227964	MsG0280006301.01.T01:CDS	30.0%
!	ATCTCTTTTAACATCTCAGT+TGG	+	Chr2:229192-229211	MsG0280006301.01.T01:intron	30.0%
!	ATTTTCTGCTATAGTGATGA+AGG	+	Chr2:230447-230466	MsG0280006301.01.T01:three_prime_UTR	30.0%
!	GGTTCATGTTGATAAATTGA+GGG	-	Chr2:227941-227960	None:intergenic	30.0%
!	GTTCATGTTGATAAATTGAG+GGG	-	Chr2:227940-227959	None:intergenic	30.0%
!	TAGAAGGTCGCAATTTTATA+GGG	-	Chr2:230659-230678	None:intergenic	30.0%
!	TGCTGAATATTTTCAAAAGG+GGG	-	Chr2:229128-229147	None:intergenic	30.0%
!	TTAGAAGGTCGCAATTTTAT+AGG	-	Chr2:230660-230679	None:intergenic	30.0%
!	TTGTGGTAGCTTAATTTTGA+TGG	+	Chr2:230512-230531	MsG0280006301.01.T01:three_prime_UTR	30.0%
!!	AACATTTTTGTTTCCGTTGT+TGG	-	Chr2:227835-227854	None:intergenic	30.0%
!!	ACATTTTTGTTTCCGTTGTT+GGG	-	Chr2:227834-227853	None:intergenic	30.0%
!!	TAGTTTTCACTTAAAGCACT+TGG	-	Chr2:230372-230391	None:intergenic	30.0%
!!!	GTGGTTTTGTCATAACTTTT+TGG	+	Chr2:230403-230422	MsG0280006301.01.T01:three_prime_UTR	30.0%
!!!	TTTGGTTCATCTTTGGTTTT+GGG	-	Chr2:229609-229628	None:intergenic	30.0%
!!!	TTTTGCGATATTTTTTTCGG+AGG	+	Chr2:230950-230969	MsG0280006301.01.T01:intron	30.0%
	AAATGATATTGGGACTTGCA+AGG	+	Chr2:231163-231182	MsG0280006301.01.T01:intron	35.0%
	AATAACTTCCATGAGAACAC+AGG	-	Chr2:228680-228699	None:intergenic	35.0%
	ACAAATTGTTGTGACCCAAT+CGG	-	Chr2:228222-228241	None:intergenic	35.0%
	ACAATACCTACCTTTCCAAT+AGG	-	Chr2:227963-227982	None:intergenic	35.0%
	AGCGAAACCAATATACAAGT+TGG	-	Chr2:229424-229443	None:intergenic	35.0%
	ATAACTTCCATGAGAACACA+GGG	-	Chr2:228679-228698	None:intergenic	35.0%
	ATAATAAAACAAAGGCCGTG+TGG	+	Chr2:228288-228307	MsG0280006301.01.T01:intron	35.0%
	ATTTAATCTTGGCAGTTGGT+TGG	-	Chr2:228575-228594	None:intergenic	35.0%
	CAAAGATGAACCAAAGAAAG+TGG	+	Chr2:229614-229633	MsG0280006301.01.T01:CDS	35.0%
	CAATACCTACCTTTCCAATA+GGG	-	Chr2:227962-227981	None:intergenic	35.0%
	CAGGTACAACTTCATGATAT+TGG	-	Chr2:228767-228786	None:intergenic	35.0%
	CCTAATATCTTGCGGAAATT+GGG	-	Chr2:229519-229538	None:intergenic	35.0%
	CTATATTTCTCTTTCGGCTT+AGG	+	Chr2:230557-230576	MsG0280006301.01.T01:three_prime_UTR	35.0%
	GAGAAGAAAAATCAATCCAC+TGG	-	Chr2:228732-228751	None:intergenic	35.0%
	GAGATGTTAGAAGAGATACA+TGG	-	Chr2:228987-229006	None:intergenic	35.0%
	TCCAAAATCATCTTACTTGG+AGG	-	Chr2:229723-229742	None:intergenic	35.0%
	TCCTCTTCAACTTCTACTTT+GGG	-	Chr2:229660-229679	None:intergenic	35.0%
	TGGATCATCTCTTATTGATC+AGG	+	Chr2:228243-228262	MsG0280006301.01.T01:CDS	35.0%
	TTGTGTCTGAATAAAGGTAG+AGG	+	Chr2:229287-229306	MsG0280006301.01.T01:intron	35.0%
	TTGTTTGATTCTCTGAACGA+GGG	+	Chr2:230593-230612	MsG0280006301.01.T01:three_prime_UTR	35.0%
	TTTGTGTCTAAATGAAGGAC+TGG	+	Chr2:229064-229083	MsG0280006301.01.T01:intron	35.0%
	TTTGTTTGATTCTCTGAACG+AGG	+	Chr2:230592-230611	MsG0280006301.01.T01:three_prime_UTR	35.0%
!	AACTTCTACTTTGGGCTTTT+CGG	-	Chr2:229652-229671	None:intergenic	35.0%
!	AGAAGAGATACATGGATTGT+TGG	-	Chr2:228979-228998	None:intergenic	35.0%
!	CACTTTCTTTGGTTCATCTT+TGG	-	Chr2:229616-229635	None:intergenic	35.0%
!	CTCATGTTGAGAGATACTTT+TGG	+	Chr2:229478-229497	MsG0280006301.01.T01:CDS	35.0%
!	GCTGAATATTTTCAAAAGGG+GGG	-	Chr2:229127-229146	None:intergenic	35.0%
!	GGGTTCATGTTGATAAATTG+AGG	-	Chr2:227942-227961	None:intergenic	35.0%
!	GTAAGATGATTTTGGATGAC+TGG	+	Chr2:229727-229746	MsG0280006301.01.T01:CDS	35.0%
!	TCCTCCAAGTAAGATGATTT+TGG	+	Chr2:229719-229738	MsG0280006301.01.T01:CDS	35.0%
!	TCTGATTTAGCCACTTTCTT+TGG	-	Chr2:229627-229646	None:intergenic	35.0%
!	TTCAAGCTTTTGTAGCTTCT+AGG	+	Chr2:229837-229856	MsG0280006301.01.T01:intron	35.0%
!	TTGACTCCTGATTTTCAGAT+GGG	+	Chr2:227900-227919	MsG0280006301.01.T01:CDS	35.0%
!	TTGGGTCACAACAATTTGTT+TGG	+	Chr2:228223-228242	MsG0280006301.01.T01:CDS	35.0%
!!	AATTCCTGTGTTTGATTTGC+AGG	+	Chr2:229984-230003	MsG0280006301.01.T01:intron	35.0%
!!	ATTGACTCCTGATTTTCAGA+TGG	+	Chr2:227899-227918	MsG0280006301.01.T01:CDS	35.0%
!!	CAAAAGTATCTCTCAACATG+AGG	-	Chr2:229480-229499	None:intergenic	35.0%
!!	CTTTGGTTCATCTTTGGTTT+TGG	-	Chr2:229610-229629	None:intergenic	35.0%
!!	GATAAATTGAGGGGTTTTGT+TGG	-	Chr2:227931-227950	None:intergenic	35.0%
!!	GTGGATTGATTTTTCTTCTC+TGG	+	Chr2:228732-228751	MsG0280006301.01.T01:CDS	35.0%
!!	TATTGGTTTCGCTAAACTCT+TGG	+	Chr2:229431-229450	MsG0280006301.01.T01:CDS	35.0%
!!	TGTTTGATTTGCAGGATTCT+GGG	+	Chr2:229992-230011	MsG0280006301.01.T01:intron	35.0%
!!!	ATTTTGGAATCTCTTGTCCA+CGG	-	Chr2:230214-230233	None:intergenic	35.0%
!!!	GAGTGCAGAAATTTTTTGCA+GGG	+	Chr2:231075-231094	MsG0280006301.01.T01:intron	35.0%
!!!	TGAGTGCAGAAATTTTTTGC+AGG	+	Chr2:231074-231093	MsG0280006301.01.T01:intron	35.0%
	AAGAAGGTCAAGAGGATTCT+TGG	-	Chr2:229700-229719	None:intergenic	40.0%
	AATCAATCCACTGGTCAATG+TGG	-	Chr2:228723-228742	None:intergenic	40.0%
	ACAACTTACTGGAGGAAAGT+AGG	-	Chr2:228809-228828	None:intergenic	40.0%
	ACTCACTCTAAACCCTATAC+CGG	-	Chr2:227596-227615	None:intergenic	40.0%
	AGAAGGTCAAGAGGATTCTT+GGG	-	Chr2:229699-229718	None:intergenic	40.0%
	AGCATCTTCAATCATCTGAC+TGG	-	Chr2:230318-230337	None:intergenic	40.0%
	AGCTGAGTGAGAATGAAACT+AGG	-	Chr2:227635-227654	None:intergenic	40.0%
	ATCAATCCACTGGTCAATGT+GGG	-	Chr2:228722-228741	None:intergenic	40.0%
	ATGAACCCTATTGGAAAGGT+AGG	+	Chr2:227954-227973	MsG0280006301.01.T01:intron	40.0%
	ATGGCATTACTCTCAAAGAC+AGG	-	Chr2:228087-228106	None:intergenic	40.0%
	CAAAGTAGAAGTTGAAGAGG+AGG	+	Chr2:229659-229678	MsG0280006301.01.T01:CDS	40.0%
	CAAATTGTTGTGACCCAATC+GGG	-	Chr2:228221-228240	None:intergenic	40.0%
	CAACATGAACCCTATTGGAA+AGG	+	Chr2:227950-227969	MsG0280006301.01.T01:CDS	40.0%
	CATGGATGAATGCTATGACA+TGG	+	Chr2:230238-230257	MsG0280006301.01.T01:CDS	40.0%
	CCCAATTTCCGCAAGATATT+AGG	+	Chr2:229516-229535	MsG0280006301.01.T01:CDS	40.0%
	CTCCTCTTCAACTTCTACTT+TGG	-	Chr2:229661-229680	None:intergenic	40.0%
	CTGATTGCTGCTGAATATGT+TGG	+	Chr2:227864-227883	MsG0280006301.01.T01:CDS	40.0%
	GAAACACCCATCTGAAAATC+AGG	-	Chr2:227909-227928	None:intergenic	40.0%
	GAACAAAGAGAGACTAACCA+AGG	-	Chr2:227739-227758	None:intergenic	40.0%
	GAAGATGCTGAACCATTTGA+GGG	+	Chr2:230329-230348	MsG0280006301.01.T01:CDS	40.0%
	GAATCCTGCAAATCAAACAC+AGG	-	Chr2:229991-230010	None:intergenic	40.0%
	GCCTAATATCTTGCGGAAAT+TGG	-	Chr2:229520-229539	None:intergenic	40.0%
	TAACCTGGCCTAATATCTTG+CGG	-	Chr2:229527-229546	None:intergenic	40.0%
	TCAAGAGGATTCTTGGGTTT+GGG	-	Chr2:229693-229712	None:intergenic	40.0%
	TCATCTTACTTGGAGGAAGA+AGG	-	Chr2:229716-229735	None:intergenic	40.0%
	TCTTGCTCACAATACCTACT+TGG	+	Chr2:229359-229378	MsG0280006301.01.T01:CDS	40.0%
	TGAAGATGCTGAACCATTTG+AGG	+	Chr2:230328-230347	MsG0280006301.01.T01:CDS	40.0%
	TTATGACAAAACCACACTCC+TGG	-	Chr2:230398-230417	None:intergenic	40.0%
	TTCAGTAAAAGGGGAAGAGT+TGG	-	Chr2:229248-229267	None:intergenic	40.0%
	TTCATCAGAGATGTCAACCT+TGG	-	Chr2:230279-230298	None:intergenic	40.0%
	TTGAAAACCAAGAGACCACA+CGG	-	Chr2:228306-228325	None:intergenic	40.0%
!	ACTTCTACTTTGGGCTTTTC+GGG	-	Chr2:229651-229670	None:intergenic	40.0%
!	CACAGGGATATGCAATCTTT+TGG	-	Chr2:228663-228682	None:intergenic	40.0%
!	TATTTTCAAAAGGGGGGAGT+TGG	-	Chr2:229121-229140	None:intergenic	40.0%
!	TCTCTCGTTTGAGATCTGAT+CGG	-	Chr2:227690-227709	None:intergenic	40.0%
!	TTCTTTTGTGACCCTGAACA+AGG	+	Chr2:230082-230101	MsG0280006301.01.T01:CDS	40.0%
!!	GTGTTTGATTTGCAGGATTC+TGG	+	Chr2:229991-230010	MsG0280006301.01.T01:intron	40.0%
	AAAAGAGCCTCTCCCTCAAA+TGG	-	Chr2:230344-230363	None:intergenic	45.0%
	AAATCCCCCAACCTTGTTCA+GGG	-	Chr2:230096-230115	None:intergenic	45.0%
	AACCCCTTCACCTTAAATGG+AGG	-	Chr2:230182-230201	None:intergenic	45.0%
	AAGTTGTACCTGCCAAGACT+TGG	+	Chr2:228775-228794	MsG0280006301.01.T01:CDS	45.0%
	ACTTACTGGAGGAAAGTAGG+CGG	-	Chr2:228806-228825	None:intergenic	45.0%
	AGATCTGATCGGAAAGCGAA+AGG	-	Chr2:227679-227698	None:intergenic	45.0%
	AGTAATGCCATTGCTCGCTA+TGG	+	Chr2:228096-228115	MsG0280006301.01.T01:CDS	45.0%
	ATATCTTGCGGAAATTGGGC+TGG	-	Chr2:229515-229534	None:intergenic	45.0%
	ATGACATGGAGCTCTATGAG+TGG	+	Chr2:230252-230271	MsG0280006301.01.T01:CDS	45.0%
	ATTTCTGCAGAGGATGGATC+TGG	+	Chr2:230112-230131	MsG0280006301.01.T01:CDS	45.0%
	CAACATGGCACACAACTTAC+TGG	-	Chr2:228820-228839	None:intergenic	45.0%
	CACAACCCCTTCACCTTAAA+TGG	-	Chr2:230185-230204	None:intergenic	45.0%
	CTCAACATGAGGAAACTCTG+AGG	-	Chr2:229469-229488	None:intergenic	45.0%
	CTCACAATACCTACTTGGTC+GGG	+	Chr2:229364-229383	MsG0280006301.01.T01:CDS	45.0%
	CTCACTCTAAACCCTATACC+GGG	-	Chr2:227595-227614	None:intergenic	45.0%
	GAAAACTAGTTCCAGGAGTG+TGG	+	Chr2:230384-230403	MsG0280006301.01.T01:exon	45.0%
	GACTCTACTCTAACACCAAG+AGG	+	Chr2:229754-229773	MsG0280006301.01.T01:CDS	45.0%
	GCCCAAAGTAGAAGTTGAAG+AGG	+	Chr2:229656-229675	MsG0280006301.01.T01:CDS	45.0%
	GCTCACAATACCTACTTGGT+CGG	+	Chr2:229363-229382	MsG0280006301.01.T01:CDS	45.0%
	GTCAAGAGGATTCTTGGGTT+TGG	-	Chr2:229694-229713	None:intergenic	45.0%
	TACCTTTGATTGCGACCTCA+CGG	-	Chr2:229785-229804	None:intergenic	45.0%
	TCGGGTACTCTCATTCCATT+CGG	-	Chr2:227572-227591	None:intergenic	45.0%
	TGCATATCCCTGTGTTCTCA+TGG	+	Chr2:228669-228688	MsG0280006301.01.T01:intron	45.0%
	TGCTTAGCAGATGGAATAGG+TGG	-	Chr2:229567-229586	None:intergenic	45.0%
	TGGATCAGAGCCTCCATTTA+AGG	+	Chr2:230169-230188	MsG0280006301.01.T01:CDS	45.0%
	TGGGACATGTATGATCCAGA+GGG	+	Chr2:230011-230030	MsG0280006301.01.T01:CDS	45.0%
	TTGTGACCCTGAACAAGGTT+GGG	+	Chr2:230087-230106	MsG0280006301.01.T01:CDS	45.0%
	TTTCCGCAAGATATTAGGCC+AGG	+	Chr2:229521-229540	MsG0280006301.01.T01:CDS	45.0%
	TTTGTGACCCTGAACAAGGT+TGG	+	Chr2:230086-230105	MsG0280006301.01.T01:CDS	45.0%
!	AGAGCCTCCATTTAAGGTGA+AGG	+	Chr2:230175-230194	MsG0280006301.01.T01:CDS	45.0%
!	AGCCTCCATTTAAGGTGAAG+GGG	+	Chr2:230177-230196	MsG0280006301.01.T01:CDS	45.0%
!	ATTTGAGGGAGAGGCTCTTT+TGG	+	Chr2:230343-230362	MsG0280006301.01.T01:CDS	45.0%
!	CATTTAAGGTGAAGGGGTTG+TGG	+	Chr2:230183-230202	MsG0280006301.01.T01:CDS	45.0%
!	GAGCCTCCATTTAAGGTGAA+GGG	+	Chr2:230176-230195	MsG0280006301.01.T01:CDS	45.0%
!	GTTGAAGCATCCCTTGTATG+TGG	+	Chr2:228607-228626	MsG0280006301.01.T01:intron	45.0%
!	TCCTTCTTTCTTTCAGGTCC+CGG	+	Chr2:228041-228060	MsG0280006301.01.T01:intron	45.0%
!	TGCTGCTTAGCAGATGGAAT+AGG	-	Chr2:229570-229589	None:intergenic	45.0%
!!	GAAATTGGGCTGGTTGATCA+AGG	-	Chr2:229505-229524	None:intergenic	45.0%
!!	GGTCGCAATCAAAGGTATTG+TGG	+	Chr2:229788-229807	MsG0280006301.01.T01:intron	45.0%
!!	GTTTTGGGCTTAGACTCCTT+AGG	-	Chr2:229594-229613	None:intergenic	45.0%
	AACAGAATGCCCGACCAAGT+AGG	-	Chr2:229376-229395	None:intergenic	50.0%
	ACCGGGACCTGAAAGAAAGA+AGG	-	Chr2:228045-228064	None:intergenic	50.0%
	AGGATTCTTGGGTTTGGGCT+TGG	-	Chr2:229688-229707	None:intergenic	50.0%
	ATCCAGAGGGATACTCTCTC+TGG	+	Chr2:230024-230043	MsG0280006301.01.T01:CDS	50.0%
	ATCCTTCACGCTCCCAACAA+CGG	+	Chr2:227819-227838	MsG0280006301.01.T01:CDS	50.0%
	ATCTGCTAAGCAGCAGCCTA+AGG	+	Chr2:229575-229594	MsG0280006301.01.T01:CDS	50.0%
	CAGCATACCATAGCGAGCAA+TGG	-	Chr2:228106-228125	None:intergenic	50.0%
	CATCAGGAGTTTCCAAGACC+GGG	-	Chr2:228062-228081	None:intergenic	50.0%
	CATGGCACACAACTTACTGG+AGG	-	Chr2:228817-228836	None:intergenic	50.0%
	CCATCAGGAGTTTCCAAGAC+CGG	-	Chr2:228063-228082	None:intergenic	50.0%
	CTCTAAACCCTATACCGGGT+CGG	-	Chr2:227591-227610	None:intergenic	50.0%
	CTCTCAAAGACAGGACCATC+AGG	-	Chr2:228078-228097	None:intergenic	50.0%
	CTGGGACATGTATGATCCAG+AGG	+	Chr2:230010-230029	MsG0280006301.01.T01:CDS	50.0%
	CTTGGAGGAAGAAGGTCAAG+AGG	-	Chr2:229708-229727	None:intergenic	50.0%
	GAAATCCCCCAACCTTGTTC+AGG	-	Chr2:230097-230116	None:intergenic	50.0%
	GGATTCTTGGGTTTGGGCTT+GGG	-	Chr2:229687-229706	None:intergenic	50.0%
	TAGCCTCAGTCTGCTTAACC+TGG	-	Chr2:229542-229561	None:intergenic	50.0%
	TAGGCGGCATATCCAAGTCT+TGG	-	Chr2:228790-228809	None:intergenic	50.0%
	TCTAAACCCTATACCGGGTC+GGG	-	Chr2:227590-227609	None:intergenic	50.0%
	TGCTGAACCATTTGAGGGAG+AGG	+	Chr2:230334-230353	MsG0280006301.01.T01:CDS	50.0%
	TGTGACCCTGAACAAGGTTG+GGG	+	Chr2:230088-230107	MsG0280006301.01.T01:CDS	50.0%
	TTCCGTGAGGTCGCAATCAA+AGG	+	Chr2:229780-229799	MsG0280006301.01.T01:CDS	50.0%
	TTTCCTGCAGTTGCCCGATT+GGG	+	Chr2:228205-228224	MsG0280006301.01.T01:intron	50.0%
!	TTAGGCTGCTGCTTAGCAGA+TGG	-	Chr2:229576-229595	None:intergenic	50.0%
!	TTTCTTTCAGGTCCCGGTCT+TGG	+	Chr2:228047-228066	MsG0280006301.01.T01:intron	50.0%
!!	AACCAGAGAGAGTATCCCTC+TGG	-	Chr2:230029-230048	None:intergenic	50.0%
!!	CTGGCTCGCAAGTATGCTTT+TGG	+	Chr2:230131-230150	MsG0280006301.01.T01:CDS	50.0%
!!	TTCGCTCAAGAGAGCACTTG+AGG	+	Chr2:229323-229342	MsG0280006301.01.T01:CDS	50.0%
	ACAAAGGCCGTGTGGTCTCT+TGG	+	Chr2:228296-228315	MsG0280006301.01.T01:intron	55.0%
	AGGCCAGGTTAAGCAGACTG+AGG	+	Chr2:229536-229555	MsG0280006301.01.T01:CDS	55.0%
	AGGTTGGGGGATTTCTGCAG+AGG	+	Chr2:230102-230121	MsG0280006301.01.T01:CDS	55.0%
	CACCAAGAGGAACTTCCGTG+AGG	+	Chr2:229767-229786	MsG0280006301.01.T01:CDS	55.0%
	CCGGTCTTGGAAACTCCTGA+TGG	+	Chr2:228060-228079	MsG0280006301.01.T01:CDS	55.0%
	CGGCATATCCAAGTCTTGGC+AGG	-	Chr2:228786-228805	None:intergenic	55.0%
	CTTTCCTGCAGTTGCCCGAT+TGG	+	Chr2:228204-228223	MsG0280006301.01.T01:intron	55.0%
	GACCTCACGGAAGTTCCTCT+TGG	-	Chr2:229772-229791	None:intergenic	55.0%
	GGAGCTCTATGAGTGGACCA+AGG	+	Chr2:230259-230278	MsG0280006301.01.T01:CDS	55.0%
	GTGACCCTGAACAAGGTTGG+GGG	+	Chr2:230089-230108	MsG0280006301.01.T01:CDS	55.0%
	TGGGGGATTTCTGCAGAGGA+TGG	+	Chr2:230106-230125	MsG0280006301.01.T01:CDS	55.0%
	TTCAGGCCCACATTGACCAG+TGG	+	Chr2:228713-228732	MsG0280006301.01.T01:intron	55.0%
!	AAGGGGTTGTGGCTTTTCCG+TGG	+	Chr2:230194-230213	MsG0280006301.01.T01:CDS	55.0%
!	AGAGTACCCGACCCGGTATA+GGG	+	Chr2:227581-227600	MsG0280006301.01.T01:intron	55.0%
!	TTCCGTTGTTGGGAGCGTGA+AGG	-	Chr2:227824-227843	None:intergenic	55.0%
!!	TGGAATGAGAGTACCCGACC+CGG	+	Chr2:227574-227593	MsG0280006301.01.T01:CDS	55.0%
	AACGAGAGAGAGCTGCGCGT+TGG	+	Chr2:227701-227720	MsG0280006301.01.T01:intron	60.0%
	GAGACTAACCAAGGCCGCCA+TGG	-	Chr2:227730-227749	None:intergenic	60.0%
	TGACCCAATCGGGCAACTGC+AGG	-	Chr2:228211-228230	None:intergenic	60.0%
!!	GAGAGTACCCGACCCGGTAT+AGG	+	Chr2:227580-227599	MsG0280006301.01.T01:intron	60.0%
	CTGCGCGTTGGAAGCCATGG+CGG	+	Chr2:227713-227732	MsG0280006301.01.T01:intron	65.0%
	GAGCTGCGCGTTGGAAGCCA+TGG	+	Chr2:227710-227729	MsG0280006301.01.T01:intron	65.0%
	GTTGGAAGCCATGGCGGCCT+TGG	+	Chr2:227719-227738	MsG0280006301.01.T01:intron	65.0%

Chromosome	Type	Strat	End	Strand	Name
Chr2	gene	227557	231505	227557	ID=MsG0280006301.01;Name=MsG0280006301.01
Chr2	mRNA	227557	231239	227557	ID=MsG0280006301.01.T01;Parent=MsG0280006301.01;Name=MsG0280006301.01.T01;_AED=0.37;_eAED=0.38;_QI=0\|0.85\|0.87\|1\|0.85\|0.75\|8\|289\|427
Chr2	exon	230006	230653	230006	ID=MsG0280006301.01.T01:exon:490;Parent=MsG0280006301.01.T01
Chr2	exon	231219	231239	231219	ID=MsG0280006301.01.T01:exon:491;Parent=MsG0280006301.01.T01
Chr2	CDS	227557	227595	227557	ID=MsG0280006301.01.T01:cds;Parent=MsG0280006301.01.T01
Chr2	CDS	227819	227971	227819	ID=MsG0280006301.01.T01:cds;Parent=MsG0280006301.01.T01
Chr2	CDS	228057	228117	228057	ID=MsG0280006301.01.T01:cds;Parent=MsG0280006301.01.T01
Chr2	CDS	228215	228264	228215	ID=MsG0280006301.01.T01:cds;Parent=MsG0280006301.01.T01
Chr2	CDS	228718	228819	228718	ID=MsG0280006301.01.T01:cds;Parent=MsG0280006301.01.T01
Chr2	CDS	229303	229801	229303	ID=MsG0280006301.01.T01:cds;Parent=MsG0280006301.01.T01
Chr2	CDS	230006	230385	230006	ID=MsG0280006301.01.T01:cds;Parent=MsG0280006301.01.T01
Chr2	three_prime_UTR	230386	230653	230386	ID=MsG0280006301.01.T01:three_prime_utr;Parent=MsG0280006301.01.T01
Chr2	three_prime_UTR	231219	231239	231219	ID=MsG0280006301.01.T01:three_prime_utr;Parent=MsG0280006301.01.T01
Chr2	mRNA	227557	231505	227557	ID=MsG0280006301.01.T02;Parent=MsG0280006301.01;Name=MsG0280006301.01.T02;_AED=0.37;_eAED=0.39;_QI=0\|0.85\|0.87\|1\|0.85\|0.75\|8\|196\|427
Chr2	exon	230006	230554	230006	ID=MsG0280006301.01.T02:exon:492;Parent=MsG0280006301.01.T02
Chr2	exon	231479	231505	231479	ID=MsG0280006301.01.T02:exon:493;Parent=MsG0280006301.01.T02
Chr2	CDS	227557	227595	227557	ID=MsG0280006301.01.T02:cds;Parent=MsG0280006301.01.T02
Chr2	CDS	227819	227971	227819	ID=MsG0280006301.01.T02:cds;Parent=MsG0280006301.01.T02
Chr2	CDS	228057	228117	228057	ID=MsG0280006301.01.T02:cds;Parent=MsG0280006301.01.T02
Chr2	CDS	228215	228264	228215	ID=MsG0280006301.01.T02:cds;Parent=MsG0280006301.01.T02
Chr2	CDS	228718	228819	228718	ID=MsG0280006301.01.T02:cds;Parent=MsG0280006301.01.T02
Chr2	CDS	229303	229801	229303	ID=MsG0280006301.01.T02:cds;Parent=MsG0280006301.01.T02
Chr2	CDS	230006	230385	230006	ID=MsG0280006301.01.T02:cds;Parent=MsG0280006301.01.T02
Chr2	three_prime_UTR	230386	230554	230386	ID=MsG0280006301.01.T02:three_prime_utr;Parent=MsG0280006301.01.T02
Chr2	three_prime_UTR	231479	231505	231479	ID=MsG0280006301.01.T02:three_prime_utr;Parent=MsG0280006301.01.T02

Gene Sequence

>MsG0280006301.01.T01

ATGAAGGATGGGCCGAATGGAATGAGAGTACCCGACCCGATCCTTCACGCTCCCAACAACGGAAACAAAAATGTTTACAAAACTCTGATTGCTGCTGAATATGTTGGTGTTCAAGTTCAATTGACTCCTGATTTTCAGATGGGTGTTTCCAACAAAACCCCTCAATTTATCAACATGAACCCTATTGGAAAGGTCCCGGTCTTGGAAACTCCTGATGGTCCTGTCTTTGAGAGTAATGCCATTGCTCGCTATGTTGCCCGATTGGGTCACAACAATTTGTTTGGATCATCTCTTATTGATCAGGCCCACATTGACCAGTGGATTGATTTTTCTTCTCTGGAGATTGATGCCAATATCATGAAGTTGTACCTGCCAAGACTTGGATATGCCGCCTACTTTCCTCCAGTAGAGGAGAATGCAATTTCTTCGCTCAAGAGAGCACTTGAGGCATTGAACACTCATCTTGCTCACAATACCTACTTGGTCGGGCATTCTGTTACCCTTGCTGACATTATAACAACATCCAACTTGTATATTGGTTTCGCTAAACTCTTGGTTAAAAGCTTCACCTCAGAGTTTCCTCATGTTGAGAGATACTTTTGGACCTTGATCAACCAGCCCAATTTCCGCAAGATATTAGGCCAGGTTAAGCAGACTGAGGCTATGCCACCTATTCCATCTGCTAAGCAGCAGCCTAAGGAGTCTAAGCCCAAAACCAAAGATGAACCAAAGAAAGTGGCTAAATCAGAGCCCGAAAAGCCCAAAGTAGAAGTTGAAGAGGAGGCACCCAAGCCCAAACCCAAGAATCCTCTTGACCTTCTTCCTCCAAGTAAGATGATTTTGGATGACTGGAAAAGACTCTACTCTAACACCAAGAGGAACTTCCGTGAGGTCGCAATCAAAGGATTCTGGGACATGTATGATCCAGAGGGATACTCTCTCTGGTTCTGTGATTACAAATACAATGATGAGAACACTGTTTCTTTTGTGACCCTGAACAAGGTTGGGGGATTTCTGCAGAGGATGGATCTGGCTCGCAAGTATGCTTTTGGAAAGATGCTTATAATTGGATCAGAGCCTCCATTTAAGGTGAAGGGGTTGTGGCTTTTCCGTGGACAAGAGATTCCAAAATTTATCATGGATGAATGCTATGACATGGAGCTCTATGAGTGGACCAAGGTTGACATCTCTGATGAAGTTCAGAAAGAGCGTGCCAGTCAGATGATTGAAGATGCTGAACCATTTGAGGGAGAGGCTCTTTTGGATGCCAAGTGCTTTAAGTGA

>MsG0280006301.01.T02

Protein sequence

>MsG0280006301.01.T01

MKDGPNGMRVPDPILHAPNNGNKNVYKTLIAAEYVGVQVQLTPDFQMGVSNKTPQFINMNPIGKVPVLETPDGPVFESNAIARYVARLGHNNLFGSSLIDQAHIDQWIDFSSLEIDANIMKLYLPRLGYAAYFPPVEENAISSLKRALEALNTHLAHNTYLVGHSVTLADIITTSNLYIGFAKLLVKSFTSEFPHVERYFWTLINQPNFRKILGQVKQTEAMPPIPSAKQQPKESKPKTKDEPKKVAKSEPEKPKVEVEEEAPKPKPKNPLDLLPPSKMILDDWKRLYSNTKRNFREVAIKGFWDMYDPEGYSLWFCDYKYNDENTVSFVTLNKVGGFLQRMDLARKYAFGKMLIIGSEPPFKVKGLWLFRGQEIPKFIMDECYDMELYEWTKVDISDEVQKERASQMIEDAEPFEGEALLDAKCFK*

>MsG0280006301.01.T02