Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480022889.01.T01 | XP_039684424.1 | 97.619 | 420 | 10 | 0 | 1 | 420 | 1 | 420 | 0 | 857 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480022889.01.T01 | Q9SIS4 | 64.516 | 403 | 130 | 6 | 7 | 397 | 1 | 402 | 0 | 535 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480022889.01.T01 | A0A396GP95 | 97.619 | 420 | 10 | 0 | 1 | 420 | 1 | 420 | 0.0 | 857 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048652.01 | MsG0480022889.01 | 0.807488 | 4.932165e-50 | 2.750748e-47 |
| MsG0180001108.01 | MsG0480022889.01 | 0.813752 | 2.183179e-51 | 1.437866e-48 |
| MsG0380012913.01 | MsG0480022889.01 | 0.817295 | 3.552141e-52 | 2.576619e-49 |
| MsG0380012918.01 | MsG0480022889.01 | 0.813172 | 2.928047e-51 | 1.898215e-48 |
| MsG0480020722.01 | MsG0480022889.01 | 0.822914 | 1.835398e-53 | 1.557225e-50 |
| MsG0480022889.01 | MsG0480023322.01 | 0.801965 | 7.017841e-49 | 3.396375e-46 |
| MsG0480022889.01 | MsG0580026162.01 | 0.805065 | 1.598206e-49 | 8.374747e-47 |
| MsG0480022889.01 | MsG0680031841.01 | 0.823090 | 1.670412e-53 | 1.424293e-50 |
| MsG0480022889.01 | MsG0780038307.01 | 0.813240 | 2.828677e-51 | 1.837192e-48 |
| MsG0480022889.01 | MsG0780038810.01 | 0.819277 | 1.263649e-52 | 9.680391e-50 |
| MsG0480022889.01 | MsG0780039916.01 | 0.800611 | 1.328515e-48 | 6.213153e-46 |
| MsG0480022889.01 | MsG0780041180.01 | 0.807154 | 5.804876e-50 | 3.209434e-47 |
| MsG0480022889.01 | MsG0880047714.01 | 0.805705 | 1.173291e-49 | 6.250558e-47 |
| MsG0480018299.01 | MsG0480022889.01 | 0.809984 | 1.443770e-50 | 8.600406e-48 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480022889.01.T01 | MTR_1g038810 | 69.213 | 445 | 105 | 5 | 7 | 420 | 9 | 452 | 0.0 | 616 |
| MsG0480022889.01.T01 | MTR_1g038810 | 68.315 | 445 | 105 | 6 | 7 | 420 | 9 | 448 | 0.0 | 602 |
| MsG0480022889.01.T01 | MTR_6g072010 | 55.425 | 341 | 131 | 2 | 61 | 381 | 47 | 386 | 3.70e-141 | 408 |
| MsG0480022889.01.T01 | MTR_6g072010 | 55.425 | 341 | 131 | 2 | 61 | 381 | 58 | 397 | 1.76e-140 | 407 |
| MsG0480022889.01.T01 | MTR_7g100070 | 42.786 | 402 | 191 | 8 | 8 | 382 | 11 | 400 | 3.01e-102 | 311 |
| MsG0480022889.01.T01 | MTR_7g100070 | 42.893 | 401 | 191 | 8 | 8 | 382 | 11 | 399 | 4.91e-102 | 311 |
| MsG0480022889.01.T01 | MTR_7g100070 | 42.786 | 402 | 191 | 8 | 8 | 382 | 51 | 440 | 1.67e-101 | 311 |
| MsG0480022889.01.T01 | MTR_6g009260 | 45.506 | 356 | 166 | 6 | 58 | 386 | 54 | 408 | 1.26e-100 | 307 |
| MsG0480022889.01.T01 | MTR_8g091360 | 54.393 | 239 | 104 | 2 | 146 | 381 | 315 | 551 | 5.84e-84 | 268 |
| MsG0480022889.01.T01 | MTR_8g091360 | 51.852 | 81 | 37 | 2 | 51 | 130 | 131 | 210 | 2.41e-17 | 84.7 |
| MsG0480022889.01.T01 | MTR_1g071680 | 51.550 | 258 | 115 | 4 | 124 | 377 | 269 | 520 | 6.17e-84 | 267 |
| MsG0480022889.01.T01 | MTR_1g071680 | 48.864 | 88 | 40 | 2 | 43 | 130 | 79 | 161 | 2.42e-17 | 84.3 |
| MsG0480022889.01.T01 | MTR_1g103330 | 53.086 | 243 | 109 | 2 | 138 | 377 | 307 | 547 | 7.80e-84 | 268 |
| MsG0480022889.01.T01 | MTR_1g103330 | 53.086 | 81 | 35 | 2 | 52 | 130 | 82 | 161 | 1.11e-18 | 88.6 |
| MsG0480022889.01.T01 | MTR_5g006820 | 53.617 | 235 | 104 | 2 | 146 | 377 | 354 | 586 | 1.10e-83 | 268 |
| MsG0480022889.01.T01 | MTR_5g006820 | 51.852 | 81 | 36 | 2 | 52 | 130 | 84 | 163 | 3.42e-18 | 87.4 |
| MsG0480022889.01.T01 | MTR_8g043480 | 51.046 | 239 | 109 | 3 | 146 | 379 | 45 | 280 | 5.43e-83 | 257 |
| MsG0480022889.01.T01 | MTR_8g043480 | 51.046 | 239 | 109 | 3 | 146 | 379 | 175 | 410 | 4.79e-81 | 256 |
| MsG0480022889.01.T01 | MTR_8g043480 | 47.945 | 73 | 37 | 1 | 58 | 130 | 8 | 79 | 2.83e-15 | 77.8 |
| MsG0480022889.01.T01 | MTR_8g043480 | 51.046 | 239 | 109 | 3 | 146 | 379 | 240 | 475 | 1.47e-80 | 257 |
| MsG0480022889.01.T01 | MTR_8g043480 | 47.945 | 73 | 37 | 1 | 58 | 130 | 73 | 144 | 3.45e-15 | 77.8 |
| MsG0480022889.01.T01 | MTR_7g095260 | 54.310 | 232 | 101 | 2 | 149 | 377 | 239 | 468 | 2.96e-80 | 256 |
| MsG0480022889.01.T01 | MTR_7g095260 | 54.930 | 71 | 31 | 1 | 60 | 130 | 40 | 109 | 2.22e-16 | 81.3 |
| MsG0480022889.01.T01 | MTR_7g095260 | 54.310 | 232 | 101 | 2 | 149 | 377 | 291 | 520 | 6.23e-80 | 257 |
| MsG0480022889.01.T01 | MTR_7g095260 | 54.930 | 71 | 31 | 1 | 60 | 130 | 92 | 161 | 3.16e-16 | 81.3 |
| MsG0480022889.01.T01 | MTR_6g042240 | 50.820 | 244 | 115 | 2 | 149 | 392 | 332 | 570 | 2.85e-77 | 251 |
| MsG0480022889.01.T01 | MTR_6g042240 | 52.113 | 71 | 33 | 1 | 61 | 131 | 59 | 128 | 1.27e-15 | 79.3 |
| MsG0480022889.01.T01 | MTR_6g042240 | 50.820 | 244 | 115 | 2 | 149 | 392 | 372 | 610 | 5.23e-77 | 251 |
| MsG0480022889.01.T01 | MTR_6g042240 | 52.113 | 71 | 33 | 1 | 61 | 131 | 99 | 168 | 1.61e-15 | 79.0 |
| MsG0480022889.01.T01 | MTR_6g042240 | 50.820 | 244 | 115 | 2 | 149 | 392 | 385 | 623 | 1.74e-76 | 250 |
| MsG0480022889.01.T01 | MTR_6g042240 | 52.113 | 71 | 33 | 1 | 61 | 131 | 112 | 181 | 1.73e-15 | 79.0 |
| MsG0480022889.01.T01 | MTR_1g097690 | 48.106 | 264 | 129 | 4 | 142 | 402 | 347 | 605 | 4.15e-76 | 248 |
| MsG0480022889.01.T01 | MTR_1g097690 | 42.529 | 87 | 49 | 1 | 45 | 131 | 87 | 172 | 1.61e-13 | 72.8 |
| MsG0480022889.01.T01 | MTR_4g098850 | 45.645 | 287 | 141 | 3 | 99 | 379 | 544 | 821 | 5.13e-75 | 250 |
| MsG0480022889.01.T01 | MTR_4g098850 | 50.526 | 190 | 92 | 1 | 190 | 379 | 2 | 189 | 1.87e-53 | 191 |
| MsG0480022889.01.T01 | MTR_4g098850 | 38.824 | 85 | 52 | 0 | 47 | 131 | 340 | 424 | 9.80e-14 | 73.6 |
| MsG0480022889.01.T01 | MTR_5g014090 | 45.614 | 285 | 152 | 2 | 95 | 379 | 317 | 598 | 1.15e-74 | 245 |
| MsG0480022889.01.T01 | MTR_5g014090 | 44.330 | 97 | 49 | 2 | 47 | 139 | 93 | 188 | 3.23e-17 | 84.3 |
| MsG0480022889.01.T01 | MTR_8g091360 | 54.422 | 147 | 64 | 1 | 146 | 289 | 315 | 461 | 1.42e-48 | 172 |
| MsG0480022889.01.T01 | MTR_8g091360 | 51.852 | 81 | 37 | 2 | 51 | 130 | 131 | 210 | 2.32e-17 | 84.3 |
| MsG0480022889.01.T01 | MTR_1g097690 | 51.678 | 149 | 72 | 0 | 142 | 290 | 347 | 495 | 1.04e-46 | 167 |
| MsG0480022889.01.T01 | MTR_1g097690 | 42.529 | 87 | 49 | 1 | 45 | 131 | 87 | 172 | 1.19e-13 | 72.8 |
| MsG0480022889.01.T01 | MTR_5g014090 | 39.175 | 194 | 117 | 1 | 95 | 288 | 317 | 509 | 2.90e-36 | 139 |
| MsG0480022889.01.T01 | MTR_5g014090 | 44.330 | 97 | 49 | 2 | 47 | 139 | 93 | 188 | 2.54e-17 | 84.3 |
| MsG0480022889.01.T01 | MTR_1g078100 | 26.859 | 417 | 226 | 13 | 61 | 420 | 248 | 642 | 1.01e-34 | 137 |
| MsG0480022889.01.T01 | MTR_1g078100 | 26.859 | 417 | 226 | 13 | 61 | 420 | 259 | 653 | 1.11e-34 | 137 |
| MsG0480022889.01.T01 | MTR_1g078100 | 26.859 | 417 | 226 | 13 | 61 | 420 | 528 | 922 | 1.13e-34 | 137 |
| MsG0480022889.01.T01 | MTR_6g092670 | 24.838 | 463 | 244 | 14 | 25 | 405 | 499 | 939 | 5.94e-30 | 123 |
| MsG0480022889.01.T01 | MTR_1g021730 | 28.221 | 326 | 167 | 16 | 62 | 371 | 34 | 308 | 6.33e-18 | 84.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480022889.01.T01 | AT2G01900 | 64.516 | 403 | 130 | 6 | 7 | 397 | 9 | 410 | 0.0 | 536 |
| MsG0480022889.01.T01 | AT2G01900 | 64.516 | 403 | 130 | 6 | 7 | 397 | 1 | 402 | 0.0 | 535 |
| MsG0480022889.01.T01 | AT2G01900 | 63.027 | 403 | 127 | 7 | 7 | 397 | 1 | 393 | 0.0 | 516 |
| MsG0480022889.01.T01 | AT2G37440 | 45.843 | 421 | 178 | 10 | 8 | 382 | 11 | 427 | 2.23e-108 | 328 |
| MsG0480022889.01.T01 | AT2G37440 | 45.843 | 421 | 178 | 10 | 8 | 382 | 11 | 427 | 2.23e-108 | 328 |
| MsG0480022889.01.T01 | AT2G37440 | 48.286 | 350 | 148 | 5 | 62 | 382 | 1 | 346 | 2.76e-101 | 307 |
| MsG0480022889.01.T01 | AT5G65090 | 56.067 | 239 | 100 | 2 | 146 | 381 | 199 | 435 | 7.72e-87 | 272 |
| MsG0480022889.01.T01 | AT5G65090 | 45.783 | 83 | 44 | 1 | 61 | 143 | 11 | 92 | 9.31e-18 | 85.5 |
| MsG0480022889.01.T01 | AT5G65090 | 56.067 | 239 | 100 | 2 | 146 | 381 | 262 | 498 | 2.27e-86 | 273 |
| MsG0480022889.01.T01 | AT5G65090 | 45.783 | 83 | 44 | 1 | 61 | 143 | 74 | 155 | 1.55e-17 | 85.1 |
| MsG0480022889.01.T01 | AT5G65090 | 56.067 | 239 | 100 | 2 | 146 | 381 | 262 | 498 | 2.27e-86 | 273 |
| MsG0480022889.01.T01 | AT5G65090 | 45.783 | 83 | 44 | 1 | 61 | 143 | 74 | 155 | 1.55e-17 | 85.1 |
| MsG0480022889.01.T01 | AT2G32010 | 52.590 | 251 | 114 | 2 | 149 | 396 | 329 | 577 | 5.08e-85 | 271 |
| MsG0480022889.01.T01 | AT2G32010 | 57.333 | 75 | 31 | 1 | 56 | 130 | 87 | 160 | 1.91e-19 | 91.3 |
| MsG0480022889.01.T01 | AT2G32010 | 52.590 | 251 | 114 | 2 | 149 | 396 | 329 | 577 | 5.08e-85 | 271 |
| MsG0480022889.01.T01 | AT2G32010 | 57.333 | 75 | 31 | 1 | 56 | 130 | 87 | 160 | 1.91e-19 | 91.3 |
| MsG0480022889.01.T01 | AT2G32010 | 52.590 | 251 | 114 | 2 | 149 | 396 | 329 | 577 | 5.08e-85 | 271 |
| MsG0480022889.01.T01 | AT2G32010 | 57.333 | 75 | 31 | 1 | 56 | 130 | 87 | 160 | 1.91e-19 | 91.3 |
| MsG0480022889.01.T01 | AT2G32010 | 52.590 | 251 | 114 | 2 | 149 | 396 | 329 | 577 | 5.08e-85 | 271 |
| MsG0480022889.01.T01 | AT2G32010 | 57.333 | 75 | 31 | 1 | 56 | 130 | 87 | 160 | 1.91e-19 | 91.3 |
| MsG0480022889.01.T01 | AT1G05470 | 55.603 | 232 | 98 | 2 | 149 | 377 | 352 | 581 | 8.21e-85 | 271 |
| MsG0480022889.01.T01 | AT1G05470 | 57.333 | 75 | 31 | 1 | 56 | 130 | 88 | 161 | 2.90e-19 | 90.5 |
| MsG0480022889.01.T01 | AT1G05470 | 55.603 | 232 | 98 | 2 | 149 | 377 | 352 | 581 | 8.21e-85 | 271 |
| MsG0480022889.01.T01 | AT1G05470 | 57.333 | 75 | 31 | 1 | 56 | 130 | 88 | 161 | 2.90e-19 | 90.5 |
| MsG0480022889.01.T01 | AT5G04980 | 52.321 | 237 | 109 | 2 | 146 | 379 | 157 | 392 | 1.49e-82 | 259 |
| MsG0480022889.01.T01 | AT5G04980 | 52.321 | 237 | 109 | 2 | 146 | 379 | 221 | 456 | 4.12e-82 | 260 |
| MsG0480022889.01.T01 | AT5G04980 | 50.746 | 67 | 32 | 1 | 61 | 127 | 39 | 104 | 2.65e-13 | 72.0 |
| MsG0480022889.01.T01 | AT5G04980 | 52.321 | 237 | 109 | 2 | 146 | 379 | 192 | 427 | 4.41e-82 | 259 |
| MsG0480022889.01.T01 | AT5G04980 | 50.746 | 67 | 32 | 1 | 61 | 127 | 10 | 75 | 2.37e-13 | 72.0 |
| MsG0480022889.01.T01 | AT5G04980 | 52.321 | 237 | 109 | 2 | 146 | 379 | 192 | 427 | 4.41e-82 | 259 |
| MsG0480022889.01.T01 | AT5G04980 | 50.746 | 67 | 32 | 1 | 61 | 127 | 10 | 75 | 2.37e-13 | 72.0 |
| MsG0480022889.01.T01 | AT3G63240 | 52.800 | 250 | 108 | 4 | 132 | 377 | 267 | 510 | 1.37e-80 | 258 |
| MsG0480022889.01.T01 | AT3G63240 | 55.714 | 70 | 30 | 1 | 61 | 130 | 89 | 157 | 2.19e-16 | 81.6 |
| MsG0480022889.01.T01 | AT3G63240 | 52.800 | 250 | 108 | 4 | 132 | 377 | 267 | 510 | 1.37e-80 | 258 |
| MsG0480022889.01.T01 | AT3G63240 | 55.714 | 70 | 30 | 1 | 61 | 130 | 89 | 157 | 2.19e-16 | 81.6 |
| MsG0480022889.01.T01 | AT1G34120 | 49.593 | 246 | 118 | 2 | 149 | 392 | 185 | 426 | 6.03e-76 | 243 |
| MsG0480022889.01.T01 | AT1G34120 | 49.593 | 246 | 118 | 2 | 149 | 392 | 336 | 577 | 5.25e-74 | 242 |
| MsG0480022889.01.T01 | AT1G34120 | 40.000 | 100 | 59 | 1 | 45 | 144 | 86 | 184 | 2.40e-14 | 75.5 |
| MsG0480022889.01.T01 | AT1G34120 | 49.593 | 246 | 118 | 2 | 149 | 392 | 340 | 581 | 6.86e-74 | 242 |
| MsG0480022889.01.T01 | AT1G34120 | 40.000 | 100 | 59 | 1 | 45 | 144 | 90 | 188 | 2.48e-14 | 75.5 |
| MsG0480022889.01.T01 | AT4G18010 | 51.948 | 231 | 109 | 1 | 149 | 379 | 392 | 620 | 9.55e-74 | 243 |
| MsG0480022889.01.T01 | AT4G18010 | 43.158 | 95 | 53 | 1 | 47 | 141 | 98 | 191 | 2.66e-17 | 84.7 |
| MsG0480022889.01.T01 | AT1G34120 | 49.593 | 246 | 117 | 3 | 149 | 392 | 340 | 580 | 4.56e-72 | 237 |
| MsG0480022889.01.T01 | AT1G34120 | 40.000 | 100 | 59 | 1 | 45 | 144 | 90 | 188 | 2.59e-14 | 75.5 |
| MsG0480022889.01.T01 | AT1G71710 | 45.306 | 245 | 130 | 2 | 149 | 393 | 411 | 651 | 2.34e-69 | 232 |
| MsG0480022889.01.T01 | AT1G71710 | 47.126 | 87 | 45 | 1 | 45 | 131 | 113 | 198 | 3.49e-18 | 87.4 |
| MsG0480022889.01.T01 | AT1G71710 | 45.306 | 245 | 130 | 2 | 149 | 393 | 402 | 642 | 2.42e-69 | 231 |
| MsG0480022889.01.T01 | AT1G71710 | 47.126 | 87 | 45 | 1 | 45 | 131 | 104 | 189 | 3.99e-18 | 87.0 |
| MsG0480022889.01.T01 | AT4G18010 | 50.521 | 192 | 93 | 1 | 149 | 340 | 392 | 581 | 9.80e-56 | 194 |
| MsG0480022889.01.T01 | AT4G18010 | 43.158 | 95 | 53 | 1 | 47 | 141 | 98 | 191 | 2.50e-17 | 84.7 |
| MsG0480022889.01.T01 | AT1G34120 | 49.640 | 139 | 68 | 1 | 149 | 285 | 336 | 474 | 7.11e-38 | 143 |
| MsG0480022889.01.T01 | AT1G34120 | 40.000 | 100 | 59 | 1 | 45 | 144 | 86 | 184 | 2.16e-14 | 75.1 |
| MsG0480022889.01.T01 | AT1G65580 | 27.578 | 417 | 222 | 14 | 61 | 417 | 273 | 669 | 6.17e-36 | 140 |
| MsG0480022889.01.T01 | AT1G65580 | 27.404 | 416 | 224 | 13 | 61 | 417 | 539 | 935 | 1.21e-35 | 140 |
| MsG0480022889.01.T01 | AT1G05630 | 26.952 | 397 | 214 | 10 | 61 | 403 | 572 | 946 | 8.55e-33 | 131 |
| MsG0480022889.01.T01 | AT1G05630 | 27.812 | 320 | 179 | 7 | 61 | 346 | 572 | 873 | 1.76e-32 | 130 |
| MsG0480022889.01.T01 | AT2G31830 | 25.598 | 418 | 231 | 11 | 61 | 418 | 581 | 978 | 6.59e-32 | 129 |
| MsG0480022889.01.T01 | AT2G31830 | 25.598 | 418 | 231 | 11 | 61 | 418 | 581 | 978 | 7.38e-32 | 129 |
| MsG0480022889.01.T01 | AT2G43900 | 26.480 | 321 | 183 | 7 | 61 | 346 | 577 | 879 | 3.56e-30 | 124 |
| MsG0480022889.01.T01 | AT2G43900 | 26.480 | 321 | 183 | 7 | 61 | 346 | 577 | 879 | 4.10e-30 | 124 |
| MsG0480022889.01.T01 | AT2G31830 | 27.187 | 320 | 181 | 7 | 61 | 346 | 581 | 882 | 8.21e-30 | 122 |
| MsG0480022889.01.T01 | AT1G47510 | 31.527 | 203 | 111 | 7 | 177 | 371 | 81 | 263 | 6.44e-19 | 86.7 |
| MsG0480022889.01.T01 | AT1G47510 | 27.673 | 318 | 174 | 13 | 62 | 371 | 56 | 325 | 1.63e-18 | 86.7 |
| MsG0480022889.01.T01 | AT1G05630 | 28.495 | 186 | 112 | 4 | 61 | 239 | 572 | 743 | 3.22e-17 | 84.7 |
| MsG0480022889.01.T01 | AT1G05630 | 28.947 | 190 | 106 | 5 | 235 | 403 | 799 | 980 | 8.12e-12 | 67.8 |
| MsG0480022889.01.T01 | AT1G47510 | 34.711 | 121 | 65 | 3 | 258 | 371 | 149 | 262 | 2.28e-11 | 64.3 |
Find 79 sgRNAs with CRISPR-Local
Find 173 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATTATGGAATTCCATTTAT+TGG | 0.159218 | 4:+78116511 | None:intergenic |
| CCAAATTCCGATATATATTA+TGG | 0.205832 | 4:-78114778 | MsG0480022889.01.T01:CDS |
| ACAATGAAATTTCCAATAAA+TGG | 0.214880 | 4:-78116523 | MsG0480022889.01.T01:CDS |
| CCATAATATATATCGGAATT+TGG | 0.240528 | 4:+78114778 | None:intergenic |
| CTTGTATTTGTGTTTGTCCT+TGG | 0.283816 | 4:+78116920 | None:intergenic |
| GTGTGTAGCCATCTAGCTTC+AGG | 0.308501 | 4:-78115740 | MsG0480022889.01.T01:CDS |
| ACGCTTACTTGTAGAGAAAA+AGG | 0.326969 | 4:-78115004 | MsG0480022889.01.T01:CDS |
| TGCTTGGAGATTTAAATTAT+AGG | 0.331581 | 4:-78115050 | MsG0480022889.01.T01:CDS |
| TCTAAAAGCTTCAAATGTAT+TGG | 0.332943 | 4:-78116555 | MsG0480022889.01.T01:CDS |
| TCATGGTCTAGAATATTTCT+TGG | 0.341551 | 4:+78115626 | None:intergenic |
| AATCAGAAAAGCTTTGAATA+AGG | 0.342999 | 4:-78116492 | MsG0480022889.01.T01:CDS |
| TGTTTGTCCTTGGGATGATT+AGG | 0.356217 | 4:+78116930 | None:intergenic |
| CTAAAAGCTTCAAATGTATT+GGG | 0.357957 | 4:-78116554 | MsG0480022889.01.T01:CDS |
| TGTGGCATAATGAGATGTTT+AGG | 0.368843 | 4:-78116323 | MsG0480022889.01.T01:CDS |
| TTGTATTTGTGTTTGTCCTT+GGG | 0.382205 | 4:+78116921 | None:intergenic |
| TCCTGTGACATCTATGTACT+TGG | 0.396131 | 4:-78116706 | MsG0480022889.01.T01:CDS |
| TTAGGTGTGATAGAATAGTA+TGG | 0.408260 | 4:-78114359 | MsG0480022889.01.T01:intron |
| TTTAAACGTAGATGATTTGT+TGG | 0.420397 | 4:-78116743 | MsG0480022889.01.T01:CDS |
| AATCAAGACTATCAGATCAT+AGG | 0.423602 | 4:-78114296 | MsG0480022889.01.T01:CDS |
| GTAGAAAACAATCAAGCTTC+CGG | 0.425807 | 4:-78114140 | MsG0480022889.01.T01:CDS |
| TGTGTAGCCATCTAGCTTCA+GGG | 0.426156 | 4:-78115739 | MsG0480022889.01.T01:CDS |
| TAGGTAGGAGCAAATTTGAT+TGG | 0.432972 | 4:+78114811 | None:intergenic |
| TTCCTTATTAGAAAATGATC+AGG | 0.438935 | 4:-78114974 | MsG0480022889.01.T01:intron |
| TCTACGTTTAAATCTTCATC+TGG | 0.441644 | 4:+78116754 | None:intergenic |
| GGCCACATGTTATACAGAAA+TGG | 0.441891 | 4:+78117077 | None:intergenic |
| ACAGCAACCATAATATATAT+CGG | 0.445561 | 4:+78114771 | None:intergenic |
| AGTAAGCGTGTCGTTTCCTC+TGG | 0.445903 | 4:+78115018 | None:intergenic |
| ATGAATGGCAACAATTTAAG+AGG | 0.447227 | 4:-78114847 | MsG0480022889.01.T01:CDS |
| GGAATTTGGACAATATTTGT+AGG | 0.456730 | 4:+78114792 | None:intergenic |
| TGGAAAGGGTTTGAAACAAC+TGG | 0.459295 | 4:-78114334 | MsG0480022889.01.T01:CDS |
| ATCAGATCATAGGCCTGTTA+AGG | 0.461445 | 4:-78114286 | MsG0480022889.01.T01:CDS |
| TAACATGTGGCCTACATTAG+TGG | 0.470394 | 4:-78117066 | MsG0480022889.01.T01:CDS |
| TGCAGTCATGTAATATTGCT+TGG | 0.474593 | 4:-78115066 | MsG0480022889.01.T01:intron |
| ACTGATGGTGAATTTACAAC+CGG | 0.475273 | 4:+78114121 | None:intergenic |
| AGGATAATCTGCTATGAAGT+TGG | 0.477080 | 4:+78117010 | None:intergenic |
| ATGTATAATTAGCAAACAAA+TGG | 0.477259 | 4:-78116423 | MsG0480022889.01.T01:CDS |
| CAACCTATGCATGACACACT+TGG | 0.485601 | 4:+78116344 | None:intergenic |
| TTTGTTAGTACATGGAACAT+AGG | 0.487262 | 4:-78116787 | MsG0480022889.01.T01:CDS |
| TATTCATATCTGTATGGATA+AGG | 0.496101 | 4:-78116394 | MsG0480022889.01.T01:CDS |
| TTGGAATATTCATATCTGTA+TGG | 0.499275 | 4:-78116400 | MsG0480022889.01.T01:CDS |
| TTTGGACAATATTTGTAGGT+AGG | 0.503958 | 4:+78114796 | None:intergenic |
| TGTGATAGAATAGTATGGTA+TGG | 0.509257 | 4:-78114354 | MsG0480022889.01.T01:CDS |
| TTTGTTTGCTAATTATACAT+TGG | 0.521389 | 4:+78116426 | None:intergenic |
| ACACTTGGATGTTGAATGAA+TGG | 0.524578 | 4:+78116359 | None:intergenic |
| AAACGTAGATGATTTGTTGG+AGG | 0.529826 | 4:-78116740 | MsG0480022889.01.T01:CDS |
| TATTATGGTTGCTGTTGTCA+TGG | 0.533129 | 4:-78114763 | MsG0480022889.01.T01:CDS |
| TTTCTTGGCAATTCAAACAA+AGG | 0.536236 | 4:+78115641 | None:intergenic |
| CTAATGATGGAGTTAATGAA+TGG | 0.537149 | 4:-78114862 | MsG0480022889.01.T01:CDS |
| ATAATTAGCAAACAAATGGT+TGG | 0.541121 | 4:-78116419 | MsG0480022889.01.T01:CDS |
| AGAATAGTATGGTATGGAAA+GGG | 0.542462 | 4:-78114348 | MsG0480022889.01.T01:CDS |
| TTAGTACATGGAACATAGGT+GGG | 0.544468 | 4:-78116783 | MsG0480022889.01.T01:CDS |
| AATTCAAACAAAGGACCTCT+AGG | 0.548525 | 4:+78115650 | None:intergenic |
| TAGAATAGTATGGTATGGAA+AGG | 0.552813 | 4:-78114349 | MsG0480022889.01.T01:CDS |
| AATGGGAATGAAGCTAATGA+TGG | 0.553046 | 4:-78114875 | MsG0480022889.01.T01:intron |
| GTTAGTACATGGAACATAGG+TGG | 0.556986 | 4:-78116784 | MsG0480022889.01.T01:CDS |
| ATCTTATTAGCCACTAATGT+AGG | 0.560756 | 4:+78117056 | None:intergenic |
| AAGATACTCAAGAAGCGACT+AGG | 0.561529 | 4:-78117038 | MsG0480022889.01.T01:CDS |
| AGAAATAAGGGTTTCATCTG+AGG | 0.563849 | 4:-78114250 | MsG0480022889.01.T01:CDS |
| AAAAGAGGCGAGCACCAGCT+TGG | 0.572374 | 4:-78114729 | MsG0480022889.01.T01:intron |
| TCTGTGGTAGAAACTTCAAA+AGG | 0.575675 | 4:+78114174 | None:intergenic |
| CATCCAAGTGTGTCATGCAT+AGG | 0.576317 | 4:-78116347 | MsG0480022889.01.T01:CDS |
| ATGGCAACAATTTAAGAGGA+TGG | 0.577966 | 4:-78114843 | MsG0480022889.01.T01:CDS |
| AATTTAAGAGGATGGCATGA+AGG | 0.581584 | 4:-78114835 | MsG0480022889.01.T01:CDS |
| ATTATGGTTGCTGTTGTCAT+GGG | 0.595205 | 4:-78114762 | MsG0480022889.01.T01:CDS |
| GTGTAGCCATCTAGCTTCAG+GGG | 0.595621 | 4:-78115738 | MsG0480022889.01.T01:CDS |
| CCCAAGTACATAGATGTCAC+AGG | 0.603987 | 4:+78116705 | None:intergenic |
| TGCCATTTCTGTATAACATG+TGG | 0.610516 | 4:-78117079 | MsG0480022889.01.T01:CDS |
| ACATTGGAAATCATCATGTG+TGG | 0.610903 | 4:+78116442 | None:intergenic |
| AACAAAGGTTCATCATAACT+AGG | 0.611095 | 4:+78116990 | None:intergenic |
| CCTGTGACATCTATGTACTT+GGG | 0.620340 | 4:-78116705 | MsG0480022889.01.T01:intron |
| AATGAGATGTTTAGGAAACA+AGG | 0.621139 | 4:-78116315 | MsG0480022889.01.T01:intron |
| AACAGTTCCTAATCATCCCA+AGG | 0.629549 | 4:-78116937 | MsG0480022889.01.T01:CDS |
| TCTACATACAAGTTCATCTG+TGG | 0.630406 | 4:+78114158 | None:intergenic |
| ATGTCTGCAAAATTCAACAA+AGG | 0.633351 | 4:+78116975 | None:intergenic |
| TCTAGGACTAGCTTTCCTAG+AGG | 0.647556 | 4:-78115665 | MsG0480022889.01.T01:CDS |
| TGAAACAACTGGAGTACACA+AGG | 0.663931 | 4:-78114323 | MsG0480022889.01.T01:CDS |
| TTATAGGATATCTCTTCCAG+AGG | 0.665637 | 4:-78115034 | MsG0480022889.01.T01:CDS |
| AGTGTGTCATGCATAGGTTG+TGG | 0.684284 | 4:-78116341 | MsG0480022889.01.T01:CDS |
| TGTAGCCATCTAGCTTCAGG+GGG | 0.696209 | 4:-78115737 | MsG0480022889.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AGATTAACATATTAATATTT+TGG | + | Chr4:78115833-78115852 | None:intergenic | 10.0% |
| !!! | TTTAAAGAGAATTTTTTTAA+TGG | + | Chr4:78116291-78116310 | None:intergenic | 10.0% |
| !! | ATTATTAAATTAAACTCAAG+AGG | + | Chr4:78115674-78115693 | None:intergenic | 15.0% |
| !! | TTATTAAATTAAACTCAAGA+GGG | + | Chr4:78115673-78115692 | None:intergenic | 15.0% |
| !!! | TTAACATATTAATATTTTGG+AGG | + | Chr4:78115830-78115849 | None:intergenic | 15.0% |
| !!! | TTGTTGTTAATCTTAATTTT+AGG | - | Chr4:78116837-78116856 | MsG0480022889.01.T01:intron | 15.0% |
| !!! | TTTTCATGATTTATTATGAA+AGG | + | Chr4:78115703-78115722 | None:intergenic | 15.0% |
| !!! | TTTTGTTTATTTTCATGTAA+AGG | - | Chr4:78114401-78114420 | MsG0480022889.01.T01:intron | 15.0% |
| !! | AAAATATCAAGCTTGAAATT+TGG | - | Chr4:78115153-78115172 | MsG0480022889.01.T01:intron | 20.0% |
| !! | ACAATATTAGAAATGTTAAG+AGG | + | Chr4:78114382-78114401 | None:intergenic | 20.0% |
| !! | ACAATGAAATTTCCAATAAA+TGG | - | Chr4:78114691-78114710 | MsG0480022889.01.T01:intron | 20.0% |
| !! | ACATTATGTGATTAATTATG+TGG | + | Chr4:78116124-78116143 | None:intergenic | 20.0% |
| !! | AGTAGTATTAGAAATCAAAT+TGG | + | Chr4:78115636-78115655 | None:intergenic | 20.0% |
| !! | ATATTAATTTCATATGGAGT+TGG | + | Chr4:78114959-78114978 | None:intergenic | 20.0% |
| !! | ATGTATAATTAGCAAACAAA+TGG | - | Chr4:78114791-78114810 | MsG0480022889.01.T01:CDS | 20.0% |
| !! | ATTTCAGCGTAAAAAATATT+TGG | + | Chr4:78115732-78115751 | None:intergenic | 20.0% |
| !! | CATAATAAATCATGAAAACA+AGG | - | Chr4:78115705-78115724 | MsG0480022889.01.T01:CDS | 20.0% |
| !!! | AATTTTTACTGCAGAAATAA+GGG | - | Chr4:78116952-78116971 | MsG0480022889.01.T01:CDS | 20.0% |
| !!! | ATATTTACAACGTTTTTCTT+TGG | + | Chr4:78115959-78115978 | None:intergenic | 20.0% |
| !!! | ATTCTAAACATGTTTTTCTA+TGG | + | Chr4:78114568-78114587 | None:intergenic | 20.0% |
| !!! | TTTGTTTGCTAATTATACAT+TGG | + | Chr4:78114791-78114810 | None:intergenic | 20.0% |
| !!! | TTTTAGTCTTTTTAGACTAT+TGG | + | Chr4:78115350-78115369 | None:intergenic | 20.0% |
| ! | AATGTCATATATGTTTGTGT+CGG | + | Chr4:78116569-78116588 | None:intergenic | 25.0% |
| ! | ACAGCAACCATAATATATAT+CGG | + | Chr4:78116446-78116465 | None:intergenic | 25.0% |
| ! | AGAATATTGATCATTAGTGA+CGG | + | Chr4:78115780-78115799 | None:intergenic | 25.0% |
| ! | ATAATTAGCAAACAAATGGT+TGG | - | Chr4:78114795-78114814 | MsG0480022889.01.T01:CDS | 25.0% |
| ! | CCAAATTCCGATATATATTA+TGG | - | Chr4:78116436-78116455 | MsG0480022889.01.T01:CDS | 25.0% |
| ! | CCATAATATATATCGGAATT+TGG | + | Chr4:78116439-78116458 | None:intergenic | 25.0% |
| ! | CTAAAAGCTTCAAATGTATT+GGG | - | Chr4:78114660-78114679 | MsG0480022889.01.T01:intron | 25.0% |
| ! | CTAATTTAATTGCATCCAAT+GGG | - | Chr4:78116322-78116341 | MsG0480022889.01.T01:CDS | 25.0% |
| ! | CTCATTAATCAATTAGTATG+TGG | + | Chr4:78116037-78116056 | None:intergenic | 25.0% |
| ! | GATTATGGAATTCCATTTAT+TGG | + | Chr4:78114706-78114725 | None:intergenic | 25.0% |
| ! | GTATTAGAAATCAAATTGGA+CGG | + | Chr4:78115632-78115651 | None:intergenic | 25.0% |
| ! | TATTCATATCTGTATGGATA+AGG | - | Chr4:78114820-78114839 | MsG0480022889.01.T01:CDS | 25.0% |
| ! | TCACTTTATAAGAATTTCGT+CGG | - | Chr4:78116713-78116732 | MsG0480022889.01.T01:CDS | 25.0% |
| ! | TCTAAAAGCTTCAAATGTAT+TGG | - | Chr4:78114659-78114678 | MsG0480022889.01.T01:intron | 25.0% |
| ! | TCTAATTTAATTGCATCCAA+TGG | - | Chr4:78116321-78116340 | MsG0480022889.01.T01:CDS | 25.0% |
| ! | TGCTTGGAGATTTAAATTAT+AGG | - | Chr4:78116164-78116183 | MsG0480022889.01.T01:intron | 25.0% |
| ! | TTCCTTATTAGAAAATGATC+AGG | - | Chr4:78116240-78116259 | MsG0480022889.01.T01:intron | 25.0% |
| ! | TTGGAATATTCATATCTGTA+TGG | - | Chr4:78114814-78114833 | MsG0480022889.01.T01:CDS | 25.0% |
| !! | AAAGGATTTTTGTTAGTACA+TGG | - | Chr4:78114419-78114438 | MsG0480022889.01.T01:intron | 25.0% |
| !! | AACCTGATCATTTTCTAATA+AGG | + | Chr4:78116245-78116264 | None:intergenic | 25.0% |
| !! | AAGATTTTCAGTTAACCAAT+GGG | + | Chr4:78115293-78115312 | None:intergenic | 25.0% |
| !! | ATTCAAAGCTTTTCTGATTA+TGG | + | Chr4:78114721-78114740 | None:intergenic | 25.0% |
| !! | CAATTTTTACTGCAGAAATA+AGG | - | Chr4:78116951-78116970 | MsG0480022889.01.T01:CDS | 25.0% |
| !! | TAAAAGTGTGTAGTATAAAG+TGG | + | Chr4:78116752-78116771 | None:intergenic | 25.0% |
| !! | TAAGATTTTCAGTTAACCAA+TGG | + | Chr4:78115294-78115313 | None:intergenic | 25.0% |
| !! | TATACTACACACTTTTAACA+TGG | - | Chr4:78116755-78116774 | MsG0480022889.01.T01:CDS | 25.0% |
| !! | TTCAAATTGTTACTTACTCA+TGG | + | Chr4:78115608-78115627 | None:intergenic | 25.0% |
| !! | TTTAAACGTAGATGATTTGT+TGG | - | Chr4:78114471-78114490 | MsG0480022889.01.T01:intron | 25.0% |
| !!! | AATACATTTGAAGCTTTTAG+AGG | + | Chr4:78114660-78114679 | None:intergenic | 25.0% |
| !!! | AATCAGAAAAGCTTTGAATA+AGG | - | Chr4:78114722-78114741 | MsG0480022889.01.T01:intron | 25.0% |
| !!! | ATGTTGCTGAAATTTTTTCT+AGG | - | Chr4:78115532-78115551 | MsG0480022889.01.T01:intron | 25.0% |
| !!! | GTTCTGTTTTATTACAATTC+AGG | - | Chr4:78114619-78114638 | MsG0480022889.01.T01:intron | 25.0% |
| AACAAAGGTTCATCATAACT+AGG | + | Chr4:78114227-78114246 | None:intergenic | 30.0% | |
| AATCAAGACTATCAGATCAT+AGG | - | Chr4:78116918-78116937 | MsG0480022889.01.T01:intron | 30.0% | |
| AATGAGATGTTTAGGAAACA+AGG | - | Chr4:78114899-78114918 | MsG0480022889.01.T01:intron | 30.0% | |
| ACAATAAACAGAAATCTGGT+TGG | - | Chr4:78116690-78116709 | MsG0480022889.01.T01:intron | 30.0% | |
| ACTAAAATCATGCATCTCAT+TGG | - | Chr4:78115363-78115382 | MsG0480022889.01.T01:intron | 30.0% | |
| AGAATAGTATGGTATGGAAA+GGG | - | Chr4:78116866-78116885 | MsG0480022889.01.T01:intron | 30.0% | |
| AGTGATATATGACATATGTG+AGG | + | Chr4:78115005-78115024 | None:intergenic | 30.0% | |
| ATATGACATATGTGAGGTTA+TGG | + | Chr4:78114999-78115018 | None:intergenic | 30.0% | |
| ATCTTATTAGCCACTAATGT+AGG | + | Chr4:78114161-78114180 | None:intergenic | 30.0% | |
| ATGAATGGCAACAATTTAAG+AGG | - | Chr4:78116367-78116386 | MsG0480022889.01.T01:CDS | 30.0% | |
| ATGGGAAAAAGATAGAAAAG+AGG | - | Chr4:78116470-78116489 | MsG0480022889.01.T01:CDS | 30.0% | |
| ATGTCTGCAAAATTCAACAA+AGG | + | Chr4:78114242-78114261 | None:intergenic | 30.0% | |
| CACTTTATAAGAATTTCGTC+GGG | - | Chr4:78116714-78116733 | MsG0480022889.01.T01:CDS | 30.0% | |
| CTGGTAGTATATAATACAGT+GGG | - | Chr4:78115911-78115930 | MsG0480022889.01.T01:intron | 30.0% | |
| GGAATTTGGACAATATTTGT+AGG | + | Chr4:78116425-78116444 | None:intergenic | 30.0% | |
| TAGAATAGTATGGTATGGAA+AGG | - | Chr4:78116865-78116884 | MsG0480022889.01.T01:intron | 30.0% | |
| TAGGACAATAAACAGAAATC+TGG | - | Chr4:78116686-78116705 | MsG0480022889.01.T01:intron | 30.0% | |
| TATACTACCAGAAAACAGAT+AGG | + | Chr4:78115902-78115921 | None:intergenic | 30.0% | |
| TATGGTAGCTATACAAAACA+TGG | + | Chr4:78114550-78114569 | None:intergenic | 30.0% | |
| TCTACGTTTAAATCTTCATC+TGG | + | Chr4:78114463-78114482 | None:intergenic | 30.0% | |
| TCTGGTAGTATATAATACAG+TGG | - | Chr4:78115910-78115929 | MsG0480022889.01.T01:intron | 30.0% | |
| TGATCAATATTCTCCAACTT+TGG | - | Chr4:78115787-78115806 | MsG0480022889.01.T01:CDS | 30.0% | |
| TGTGATAGAATAGTATGGTA+TGG | - | Chr4:78116860-78116879 | MsG0480022889.01.T01:intron | 30.0% | |
| TTAGGTGTGATAGAATAGTA+TGG | - | Chr4:78116855-78116874 | MsG0480022889.01.T01:intron | 30.0% | |
| TTGTATTTGTGTTTGTCCTT+GGG | + | Chr4:78114296-78114315 | None:intergenic | 30.0% | |
| TTTATTGTCCTACATGTGTT+TGG | + | Chr4:78116678-78116697 | None:intergenic | 30.0% | |
| TTTCTTGGCAATTCAAACAA+AGG | + | Chr4:78115576-78115595 | None:intergenic | 30.0% | |
| TTTGGACAATATTTGTAGGT+AGG | + | Chr4:78116421-78116440 | None:intergenic | 30.0% | |
| TTTGTTAGTACATGGAACAT+AGG | - | Chr4:78114427-78114446 | MsG0480022889.01.T01:intron | 30.0% | |
| ! | ATGGAGTTGGTTATAGTTAT+AGG | + | Chr4:78114946-78114965 | None:intergenic | 30.0% |
| ! | CTAATGATGGAGTTAATGAA+TGG | - | Chr4:78116352-78116371 | MsG0480022889.01.T01:CDS | 30.0% |
| ! | TCATGGTCTAGAATATTTCT+TGG | + | Chr4:78115591-78115610 | None:intergenic | 30.0% |
| ! | TGTTAATTTTCTTACCAAGC+TGG | + | Chr4:78116502-78116521 | None:intergenic | 30.0% |
| !! | TCTACACCAATTAATTTGCA+GGG | - | Chr4:78115405-78115424 | MsG0480022889.01.T01:intron | 30.0% |
| !! | TTATAGGCTTATAGCCTTAT+AGG | + | Chr4:78114930-78114949 | None:intergenic | 30.0% |
| !! | TTCTACACCAATTAATTTGC+AGG | - | Chr4:78115404-78115423 | MsG0480022889.01.T01:intron | 30.0% |
| !! | TTGTACACCAATTAATTTGC+AGG | - | Chr4:78115315-78115334 | MsG0480022889.01.T01:intron | 30.0% |
| !!! | TTTGGAGGCATTTTTTCTAT+GGG | + | Chr4:78115815-78115834 | None:intergenic | 30.0% |
| !!! | TTTTGGAGGCATTTTTTCTA+TGG | + | Chr4:78115816-78115835 | None:intergenic | 30.0% |
| AATGGGAATGAAGCTAATGA+TGG | - | Chr4:78116339-78116358 | MsG0480022889.01.T01:CDS | 35.0% | |
| AATTCAAACAAAGGACCTCT+AGG | + | Chr4:78115567-78115586 | None:intergenic | 35.0% | |
| AATTTAAGAGGATGGCATGA+AGG | - | Chr4:78116379-78116398 | MsG0480022889.01.T01:CDS | 35.0% | |
| ACACTTGGATGTTGAATGAA+TGG | + | Chr4:78114858-78114877 | None:intergenic | 35.0% | |
| ACAGAACCCTGCAAATTAAT+TGG | + | Chr4:78115414-78115433 | None:intergenic | 35.0% | |
| ACATTGGAAATCATCATGTG+TGG | + | Chr4:78114775-78114794 | None:intergenic | 35.0% | |
| ACGCTTACTTGTAGAGAAAA+AGG | - | Chr4:78116210-78116229 | MsG0480022889.01.T01:intron | 35.0% | |
| ACTTGTAGAGAAAAAGGACT+GGG | - | Chr4:78116216-78116235 | MsG0480022889.01.T01:intron | 35.0% | |
| AGAAATAAGGGTTTCATCTG+AGG | - | Chr4:78116964-78116983 | MsG0480022889.01.T01:CDS | 35.0% | |
| AGGATAATCTGCTATGAAGT+TGG | + | Chr4:78114207-78114226 | None:intergenic | 35.0% | |
| ATGGCAACAATTTAAGAGGA+TGG | - | Chr4:78116371-78116390 | MsG0480022889.01.T01:CDS | 35.0% | |
| ATGTGTGTGATTGTTCTTAC+CGG | + | Chr4:78115050-78115069 | None:intergenic | 35.0% | |
| CTATACAAAACATGGATCAG+TGG | + | Chr4:78114542-78114561 | None:intergenic | 35.0% | |
| CTTGTATTTGTGTTTGTCCT+TGG | + | Chr4:78114297-78114316 | None:intergenic | 35.0% | |
| GCAGAAACCTGCAAATTAAT+TGG | + | Chr4:78115325-78115344 | None:intergenic | 35.0% | |
| GCAGTAAAAATTGCCTTAAC+AGG | + | Chr4:78116944-78116963 | None:intergenic | 35.0% | |
| GTAGAAAACAATCAAGCTTC+CGG | - | Chr4:78117074-78117093 | MsG0480022889.01.T01:CDS | 35.0% | |
| TACTTGTAGAGAAAAAGGAC+TGG | - | Chr4:78116215-78116234 | MsG0480022889.01.T01:intron | 35.0% | |
| TAGGTAGGAGCAAATTTGAT+TGG | + | Chr4:78116406-78116425 | None:intergenic | 35.0% | |
| TAGTATATAATACAGTGGGC+CGG | - | Chr4:78115915-78115934 | MsG0480022889.01.T01:intron | 35.0% | |
| TCACTTGTCAACATTCGATT+TGG | - | Chr4:78115020-78115039 | MsG0480022889.01.T01:CDS | 35.0% | |
| TCTACATACAAGTTCATCTG+TGG | + | Chr4:78117059-78117078 | None:intergenic | 35.0% | |
| TCTGTGGTAGAAACTTCAAA+AGG | + | Chr4:78117043-78117062 | None:intergenic | 35.0% | |
| TGCAGTCATGTAATATTGCT+TGG | - | Chr4:78116148-78116167 | MsG0480022889.01.T01:intron | 35.0% | |
| TGTGGCATAATGAGATGTTT+AGG | - | Chr4:78114891-78114910 | MsG0480022889.01.T01:intron | 35.0% | |
| TTAGTACATGGAACATAGGT+GGG | - | Chr4:78114431-78114450 | MsG0480022889.01.T01:intron | 35.0% | |
| TTATAGGATATCTCTTCCAG+AGG | - | Chr4:78116180-78116199 | MsG0480022889.01.T01:intron | 35.0% | |
| ! | ATCATTAGCTTCATTCCCAT+TGG | + | Chr4:78116340-78116359 | None:intergenic | 35.0% |
| ! | ATTATGGTTGCTGTTGTCAT+GGG | - | Chr4:78116452-78116471 | MsG0480022889.01.T01:CDS | 35.0% |
| ! | GTAACTTTCTTTTTACGCAC+CGG | + | Chr4:78115937-78115956 | None:intergenic | 35.0% |
| ! | TATTATGGTTGCTGTTGTCA+TGG | - | Chr4:78116451-78116470 | MsG0480022889.01.T01:CDS | 35.0% |
| ! | TGCCATTTCTGTATAACATG+TGG | - | Chr4:78114135-78114154 | MsG0480022889.01.T01:CDS | 35.0% |
| !! | AAACGTAGATGATTTGTTGG+AGG | - | Chr4:78114474-78114493 | MsG0480022889.01.T01:intron | 35.0% |
| !! | AAAGTGTCCTATCTGTTTTC+TGG | - | Chr4:78115892-78115911 | MsG0480022889.01.T01:intron | 35.0% |
| !! | TTTTAAAAGGTCGACGTTGA+CGG | + | Chr4:78115244-78115263 | None:intergenic | 35.0% |
| !!! | GACTATTGGCTGCTTTTAAA+AGG | + | Chr4:78115257-78115276 | None:intergenic | 35.0% |
| !!! | GATGCAAGGTTTTAGACTAT+TGG | + | Chr4:78115271-78115290 | None:intergenic | 35.0% |
| !!! | TTGGAGGCATTTTTTCTATG+GGG | + | Chr4:78115814-78115833 | None:intergenic | 35.0% |
| AACAGTTCCTAATCATCCCA+AGG | - | Chr4:78114277-78114296 | MsG0480022889.01.T01:CDS | 40.0% | |
| AAGAATTTCGTCGGGAAATC+TGG | - | Chr4:78116722-78116741 | MsG0480022889.01.T01:CDS | 40.0% | |
| AAGATACTCAAGAAGCGACT+AGG | - | Chr4:78114176-78114195 | MsG0480022889.01.T01:CDS | 40.0% | |
| ATCAGATCATAGGCCTGTTA+AGG | - | Chr4:78116928-78116947 | MsG0480022889.01.T01:CDS | 40.0% | |
| ATCCAAGTACTAGTGATCAG+AGG | + | Chr4:78114339-78114358 | None:intergenic | 40.0% | |
| ATCCTCTGATCACTAGTACT+TGG | - | Chr4:78114334-78114353 | MsG0480022889.01.T01:CDS | 40.0% | |
| CAATGTAACAACCACTGATG+TGG | + | Chr4:78115084-78115103 | None:intergenic | 40.0% | |
| CCTGTGACATCTATGTACTT+GGG | - | Chr4:78114509-78114528 | MsG0480022889.01.T01:intron | 40.0% | |
| GAAACAAGGTGAGACCTATA+AGG | - | Chr4:78114913-78114932 | MsG0480022889.01.T01:intron | 40.0% | |
| GGCCACATGTTATACAGAAA+TGG | + | Chr4:78114140-78114159 | None:intergenic | 40.0% | |
| GTTAGTACATGGAACATAGG+TGG | - | Chr4:78114430-78114449 | MsG0480022889.01.T01:intron | 40.0% | |
| TAACATGTGGCCTACATTAG+TGG | - | Chr4:78114148-78114167 | MsG0480022889.01.T01:CDS | 40.0% | |
| TCATGCAGTAAGCACATTAG+TGG | + | Chr4:78115189-78115208 | None:intergenic | 40.0% | |
| TCCTGTGACATCTATGTACT+TGG | - | Chr4:78114508-78114527 | MsG0480022889.01.T01:intron | 40.0% | |
| TGAAACAACTGGAGTACACA+AGG | - | Chr4:78116891-78116910 | MsG0480022889.01.T01:intron | 40.0% | |
| TGTATGAGTCAGTGTCATGT+CGG | - | Chr4:78116646-78116665 | MsG0480022889.01.T01:intron | 40.0% | |
| TGTTTGTCCTTGGGATGATT+AGG | + | Chr4:78114287-78114306 | None:intergenic | 40.0% | |
| ! | TCTAAAACCTTGCATCCCAT+TGG | - | Chr4:78115275-78115294 | MsG0480022889.01.T01:intron | 40.0% |
| ! | TGGAAAGGGTTTGAAACAAC+TGG | - | Chr4:78116880-78116899 | MsG0480022889.01.T01:intron | 40.0% |
| ! | TTTTCTATGGGGACCAAAGT+TGG | + | Chr4:78115803-78115822 | None:intergenic | 40.0% |
| !! | CAACATTCGATTTGGATTGC+CGG | - | Chr4:78115028-78115047 | MsG0480022889.01.T01:CDS | 40.0% |
| AGTGTGTCATGCATAGGTTG+TGG | - | Chr4:78114873-78114892 | MsG0480022889.01.T01:intron | 45.0% | |
| ATTTCGTCGGGAAATCTGGT+TGG | - | Chr4:78116726-78116745 | MsG0480022889.01.T01:CDS | 45.0% | |
| CAACCTATGCATGACACACT+TGG | + | Chr4:78114873-78114892 | None:intergenic | 45.0% | |
| CAGTTAACCAATGGGATGCA+AGG | + | Chr4:78115285-78115304 | None:intergenic | 45.0% | |
| CATCCAAGTGTGTCATGCAT+AGG | - | Chr4:78114867-78114886 | MsG0480022889.01.T01:intron | 45.0% | |
| CCCAAGTACATAGATGTCAC+AGG | + | Chr4:78114512-78114531 | None:intergenic | 45.0% | |
| GGAGTACACCAAACACATGT+AGG | - | Chr4:78116667-78116686 | MsG0480022889.01.T01:intron | 45.0% | |
| ! | TGTGTAGCCATCTAGCTTCA+GGG | - | Chr4:78115475-78115494 | MsG0480022889.01.T01:intron | 45.0% |
| !! | TCTAGGACTAGCTTTCCTAG+AGG | - | Chr4:78115549-78115568 | MsG0480022889.01.T01:intron | 45.0% |
| !! | TTAATAATATTAATTTCATA+TGG | + | Chr4:78114965-78114984 | None:intergenic | 5.0% |
| TAGCTTCAGGGGGCAAACAA+GGG | - | Chr4:78115487-78115506 | MsG0480022889.01.T01:intron | 50.0% | |
| TCACGTAGCTACCACATCAG+TGG | - | Chr4:78115070-78115089 | MsG0480022889.01.T01:intron | 50.0% | |
| ! | GTGTAGCCATCTAGCTTCAG+GGG | - | Chr4:78115476-78115495 | MsG0480022889.01.T01:intron | 50.0% |
| ! | GTGTGTAGCCATCTAGCTTC+AGG | - | Chr4:78115474-78115493 | MsG0480022889.01.T01:intron | 50.0% |
| ! | TGTAGCCATCTAGCTTCAGG+GGG | - | Chr4:78115477-78115496 | MsG0480022889.01.T01:intron | 50.0% |
| !! | AAGGTCGACGTTGACGGATT+TGG | + | Chr4:78115238-78115257 | None:intergenic | 50.0% |
| !! | AGTAAGCGTGTCGTTTCCTC+TGG | + | Chr4:78116199-78116218 | None:intergenic | 50.0% |
| AAAAGAGGCGAGCACCAGCT+TGG | - | Chr4:78116485-78116504 | MsG0480022889.01.T01:CDS | 55.0% | |
| AGCTTCAGGGGGCAAACAAG+GGG | - | Chr4:78115488-78115507 | MsG0480022889.01.T01:intron | 55.0% | |
| CTAGCTTCAGGGGGCAAACA+AGG | - | Chr4:78115486-78115505 | MsG0480022889.01.T01:intron | 55.0% | |
| GTTTGCCCCCTGAAGCTAGA+TGG | + | Chr4:78115485-78115504 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr4 | gene | 78114134 | 78117102 | 78114134 | ID=MsG0480022889.01;Name=MsG0480022889.01 |
| Chr4 | mRNA | 78114134 | 78117102 | 78114134 | ID=MsG0480022889.01.T01;Parent=MsG0480022889.01;Name=MsG0480022889.01.T01;_AED=0.47;_eAED=0.47;_QI=0|0|0|1|1|1|7|0|420 |
| Chr4 | exon | 78116921 | 78117102 | 78116921 | ID=MsG0480022889.01.T01:exon:8707;Parent=MsG0480022889.01.T01 |
| Chr4 | exon | 78116706 | 78116813 | 78116706 | ID=MsG0480022889.01.T01:exon:8706;Parent=MsG0480022889.01.T01 |
| Chr4 | exon | 78116316 | 78116595 | 78116316 | ID=MsG0480022889.01.T01:exon:8705;Parent=MsG0480022889.01.T01 |
| Chr4 | exon | 78115626 | 78115810 | 78115626 | ID=MsG0480022889.01.T01:exon:8704;Parent=MsG0480022889.01.T01 |
| Chr4 | exon | 78114975 | 78115083 | 78114975 | ID=MsG0480022889.01.T01:exon:8703;Parent=MsG0480022889.01.T01 |
| Chr4 | exon | 78114730 | 78114884 | 78114730 | ID=MsG0480022889.01.T01:exon:8702;Parent=MsG0480022889.01.T01 |
| Chr4 | exon | 78114134 | 78114377 | 78114134 | ID=MsG0480022889.01.T01:exon:8701;Parent=MsG0480022889.01.T01 |
| Chr4 | CDS | 78116921 | 78117102 | 78116921 | ID=MsG0480022889.01.T01:cds;Parent=MsG0480022889.01.T01 |
| Chr4 | CDS | 78116706 | 78116813 | 78116706 | ID=MsG0480022889.01.T01:cds;Parent=MsG0480022889.01.T01 |
| Chr4 | CDS | 78116316 | 78116595 | 78116316 | ID=MsG0480022889.01.T01:cds;Parent=MsG0480022889.01.T01 |
| Chr4 | CDS | 78115626 | 78115810 | 78115626 | ID=MsG0480022889.01.T01:cds;Parent=MsG0480022889.01.T01 |
| Chr4 | CDS | 78114975 | 78115083 | 78114975 | ID=MsG0480022889.01.T01:cds;Parent=MsG0480022889.01.T01 |
| Chr4 | CDS | 78114730 | 78114884 | 78114730 | ID=MsG0480022889.01.T01:cds;Parent=MsG0480022889.01.T01 |
| Chr4 | CDS | 78114134 | 78114377 | 78114134 | ID=MsG0480022889.01.T01:cds;Parent=MsG0480022889.01.T01 |
| Gene Sequence |
| Protein sequence |