AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580024929.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580024929.01.T01 MTR_5g019490 91.434 502 11 5 1 477 1 495 0.0 909
MsG0580024929.01.T01 MTR_8g090285 41.037 463 233 5 44 476 6 458 3.74e-112 341
MsG0580024929.01.T01 MTR_8g090275 40.605 463 233 4 44 476 5 455 5.23e-112 340
MsG0580024929.01.T01 MTR_5g063390 39.186 467 238 5 44 476 5 459 9.29e-109 332
MsG0580024929.01.T01 MTR_8g090270 40.389 463 238 3 44 476 6 460 8.29e-101 311
MsG0580024929.01.T01 MTR_5g063390 38.012 342 190 4 145 476 1 330 2.17e-74 239
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580024929.01.T01 AT4G36790 65.339 502 136 6 1 477 1 489 0.0 620
MsG0580024929.01.T01 AT2G18590 54.167 456 177 4 51 476 19 472 7.68e-165 474
MsG0580024929.01.T01 AT5G10190 40.693 462 234 3 44 476 5 455 1.60e-113 343
MsG0580024929.01.T01 AT1G78130 38.661 463 245 5 44 476 5 458 5.31e-103 317
MsG0580024929.01.T01 AT5G10190 39.169 337 189 2 145 476 1 326 1.03e-78 249
MsG0580024929.01.T01 AT5G10190 40.171 351 175 2 44 370 5 344 2.45e-78 248

Find 141 sgRNAs with CRISPR-Local

Find 276 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACATTCATCAAATCAATTT+TGG 0.065124 5:+11746398 None:intergenic
CGCGCAATTTAGTGCCTTTA+TGG 0.152888 5:-11747406 MsG0580024929.01.T01:CDS
ACATCATCTCCTCTTCTTTC+AGG 0.153857 5:+11746962 None:intergenic
AGCAATAAGTTCAAAGTATA+TGG 0.193344 5:+11746509 None:intergenic
TCATGGCTGGTCAGAAGTTT+TGG 0.226566 5:-11749014 MsG0580024929.01.T01:CDS
CGAAGATTTGAACTCCATTT+AGG 0.228196 5:+11746868 None:intergenic
AATGCAGGCCCGTCTGATTT+AGG 0.243271 5:-11749359 MsG0580024929.01.T01:CDS
GGAAAACGATGATTTGGATT+TGG 0.247729 5:+11750293 None:intergenic
TATCTTGATACAAGTCAATT+TGG 0.248200 5:+11746428 None:intergenic
ATTCCAAGTAATTGTCTTAC+AGG 0.251672 5:-11748279 MsG0580024929.01.T01:CDS
GCAAGTTTGAGTGCATTTAT+TGG 0.252034 5:-11748955 MsG0580024929.01.T01:CDS
CATTCATTGCTGATAGTTAT+AGG 0.256064 5:-11749119 MsG0580024929.01.T01:CDS
CACATGATTCGACCTGAATA+TGG 0.266385 5:+11747429 None:intergenic
CACAAGCAGACAGAGTTAAA+AGG 0.272801 5:+11746899 None:intergenic
TATCAACCTGGCTGCTATAA+TGG 0.279651 5:-11749438 MsG0580024929.01.T01:CDS
GGAGTTAGAGGAGTTGGATT+TGG 0.291569 5:-11749093 MsG0580024929.01.T01:CDS
CTCTTCTGTTGCAGCACCTT+TGG 0.292837 5:-11747181 MsG0580024929.01.T01:CDS
GAAAACGATGATTTGGATTT+GGG 0.308169 5:+11750294 None:intergenic
AGGGAAGGAGTTAGAGGAGT+TGG 0.308211 5:-11749099 MsG0580024929.01.T01:CDS
ATTGTCTTACAGGGCATTAT+TGG 0.308907 5:-11748269 MsG0580024929.01.T01:CDS
CATCATCTCCTCTTCTTTCA+GGG 0.312070 5:+11746963 None:intergenic
TTTGTGAATTTCTCTTGCTT+TGG 0.320507 5:-11750388 MsG0580024929.01.T01:five_prime_UTR
ACAATGTGGTTCGAACTAAT+TGG 0.325301 5:-11748215 MsG0580024929.01.T01:intron
TGGAGAGCTATAAATGGATT+TGG 0.336581 5:-11749171 MsG0580024929.01.T01:CDS
GACCTTTCTCTTGTTTAATT+CGG 0.339694 5:-11750496 MsG0580024929.01.T01:five_prime_UTR
ATATGTAGAAACCAAATAAA+AGG 0.343339 5:+11746374 None:intergenic
CAATCTCATCTAAATGATCT+TGG 0.344681 5:-11750600 MsG0580024929.01.T01:five_prime_UTR
GGAAGTGGAAAACGATGATT+TGG 0.348923 5:+11750287 None:intergenic
ATTGGTACTGTAGGCGGAAT+TGG 0.353907 5:-11749057 MsG0580024929.01.T01:CDS
AGTTATAGGGAAGGAGTTAG+AGG 0.355105 5:-11749105 MsG0580024929.01.T01:CDS
ATCCGCGAAGGACGCTGATT+TGG 0.357441 5:-11750416 MsG0580024929.01.T01:five_prime_UTR
ACACAAATCTATCCATATTC+AGG 0.362159 5:-11747441 MsG0580024929.01.T01:CDS
ATTCATTGCTGATAGTTATA+GGG 0.365814 5:-11749118 MsG0580024929.01.T01:CDS
GAGTACTCACTTCATCTTCA+TGG 0.375397 5:+11750251 None:intergenic
AGCTATAAATGGATTTGGTT+TGG 0.379471 5:-11749166 MsG0580024929.01.T01:CDS
AGGGATGATTCTATCTATAA+TGG 0.380942 5:-11748371 MsG0580024929.01.T01:CDS
GCGCAATTTAGTGCCTTTAT+GGG 0.381756 5:-11747405 MsG0580024929.01.T01:CDS
ATTCTTGCAGAGAAAATGTT+TGG 0.382692 5:-11747153 MsG0580024929.01.T01:CDS
TTGTCTTACAGGGCATTATT+GGG 0.383613 5:-11748268 MsG0580024929.01.T01:CDS
TCGATTGTCTTGTCTTATCA+TGG 0.385947 5:-11750361 MsG0580024929.01.T01:exon
TTAATCTAAGAATAATCTCT+TGG 0.394061 5:-11750538 MsG0580024929.01.T01:five_prime_UTR
CATCAACTTGGAGGTACTCT+TGG 0.401100 5:-11748334 MsG0580024929.01.T01:CDS
TTAATACCAAACATTTCAAA+AGG 0.402906 5:-11746697 MsG0580024929.01.T01:three_prime_UTR
CTTGTGACTTCGGTCCTAAA+TGG 0.405691 5:-11746882 MsG0580024929.01.T01:three_prime_UTR
AACTTTGATGACAGATTTAG+TGG 0.406804 5:+11748307 None:intergenic
AGTAAACATGAAACATTTGC+AGG 0.414201 5:-11746843 MsG0580024929.01.T01:three_prime_UTR
TGAGAATGGAATGCCCATAA+AGG 0.423692 5:+11747392 None:intergenic
TCAATGATGGCAATTCCATT+TGG 0.426554 5:-11747057 MsG0580024929.01.T01:CDS
TTTGCTATTGGATGTGCAAT+GGG 0.426804 5:-11747498 MsG0580024929.01.T01:CDS
ATGATGTTTAAATAGACCTT+AGG 0.429607 5:+11746656 None:intergenic
CGGAATTGGAGGTGGTGTTA+TGG 0.435818 5:-11749043 MsG0580024929.01.T01:CDS
ATCATTGTCCTGTGTTTGAC+TGG 0.444744 5:+11747237 None:intergenic
CTAACTTCTTTGTAGACTGC+TGG 0.445710 5:+11749392 None:intergenic
TAGGTTACCTCACATTCATA+AGG 0.446153 5:-11749340 MsG0580024929.01.T01:CDS
TGAGGCTCTTGCCTTGTCAA+AGG 0.450694 5:-11747088 MsG0580024929.01.T01:CDS
TCTGTTGCAGCACCTTTGGT+TGG 0.450921 5:-11747177 MsG0580024929.01.T01:CDS
TCAGCTGAAGATCCTTTGAT+AGG 0.451456 5:+11747108 None:intergenic
TTCATAAGGAACTTTGTTCA+AGG 0.451557 5:-11749326 MsG0580024929.01.T01:CDS
ACAAGCAGACAGAGTTAAAA+GGG 0.455125 5:+11746900 None:intergenic
ATTGTATTATGTATTTAAGA+AGG 0.457056 5:-11747010 MsG0580024929.01.T01:CDS
TTAAATATGTCCGATCCGTT+TGG 0.457641 5:+11746716 None:intergenic
CGCGAAGGACGCTGATTTGG+TGG 0.461134 5:-11750413 MsG0580024929.01.T01:five_prime_UTR
TTATGGGCATTCCATTCTCA+TGG 0.462787 5:-11747389 MsG0580024929.01.T01:CDS
CACAAGCAACACAATCCAAA+TGG 0.463522 5:+11747042 None:intergenic
GAGGCTCTTGCCTTGTCAAA+GGG 0.464791 5:-11747087 MsG0580024929.01.T01:CDS
AATCTCATCTAAATGATCTT+GGG 0.465484 5:-11750599 MsG0580024929.01.T01:five_prime_UTR
AAAGGGTCTTCTTTCAATGA+TGG 0.467546 5:-11747070 MsG0580024929.01.T01:CDS
CGATTGTCTTGTCTTATCAT+GGG 0.468458 5:-11750360 MsG0580024929.01.T01:exon
ACTCTGTCTGCTTGTGACTT+CGG 0.472536 5:-11746892 MsG0580024929.01.T01:three_prime_UTR
TTATGGGACTAACTATAAGC+TGG 0.478256 5:-11747302 MsG0580024929.01.T01:CDS
ATTAACATTGTTAAAGTACA+AGG 0.479093 5:+11746567 None:intergenic
CTAAATGGAGTTCAAATCTT+CGG 0.480480 5:-11746867 MsG0580024929.01.T01:three_prime_UTR
CACCAAATCAGCGTCCTTCG+CGG 0.486892 5:+11750414 None:intergenic
GCAATGAATGACTGCAATGC+TGG 0.486956 5:+11749132 None:intergenic
CTAAGAAGAAACCATGAGAA+TGG 0.487296 5:+11747378 None:intergenic
TAATACCAAACATTTCAAAA+GGG 0.488362 5:-11746696 MsG0580024929.01.T01:three_prime_UTR
TTCTCACTAGCATCTTGAAT+GGG 0.489483 5:+11748886 None:intergenic
CAATTCAATAAAGCAACTAA+TGG 0.494567 5:+11746468 None:intergenic
GCAATAAGTTCAAAGTATAT+GGG 0.500238 5:+11746510 None:intergenic
TGTGCAATGGGATCCTTGAT+AGG 0.503894 5:-11747486 MsG0580024929.01.T01:CDS
TTCACTCATTCTTATCAACC+TGG 0.507417 5:-11749450 MsG0580024929.01.T01:CDS
AGCTATTGACCCTCCTATCA+AGG 0.512037 5:+11747473 None:intergenic
TGCCCTGTAAGACAATTACT+TGG 0.516786 5:+11748276 None:intergenic
ATCAACTTGGAGGTACTCTT+GGG 0.517727 5:-11748333 MsG0580024929.01.T01:CDS
GAATTGTCTTATATTTGCTT+AGG 0.519916 5:-11746451 MsG0580024929.01.T01:three_prime_UTR
AGAAAACTAGTTACTGATTG+AGG 0.527052 5:+11747348 None:intergenic
GTCCGAATTAAACAAGAGAA+AGG 0.531840 5:+11750494 None:intergenic
ACAATTGCTTATACTTGAGA+TGG 0.532079 5:-11746748 MsG0580024929.01.T01:three_prime_UTR
ATTCTCACTAGCATCTTGAA+TGG 0.533216 5:+11748885 None:intergenic
GGACTAACTATAAGCTGGAA+TGG 0.534983 5:-11747297 MsG0580024929.01.T01:CDS
CACGCTCCATTATAGCAGCC+AGG 0.535980 5:+11749432 None:intergenic
AACTATAAGCTGGAATGGTA+CGG 0.538107 5:-11747292 MsG0580024929.01.T01:CDS
AGAAGAGTAGTTTGCGTGAA+CGG 0.539793 5:-11746925 MsG0580024929.01.T01:three_prime_UTR
GTTAGTGAAGCATTCAATGC+AGG 0.545523 5:-11749374 MsG0580024929.01.T01:CDS
ATGCTAGTGTGACATCAACT+TGG 0.545853 5:-11748346 MsG0580024929.01.T01:CDS
GGTTTGAGAATGCGTGGAAG+TGG 0.548461 5:+11750272 None:intergenic
GGACTATCATCACCACTAGC+TGG 0.550906 5:-11749305 MsG0580024929.01.T01:intron
ACTGTAGGCGGAATTGGAGG+TGG 0.551168 5:-11749051 MsG0580024929.01.T01:CDS
AATGCAAACCCTGAAAGAAG+AGG 0.551409 5:-11746971 MsG0580024929.01.T01:CDS
TCTTCAAGTAAAAGAAAATG+AGG 0.552207 5:+11746819 None:intergenic
AAATCTGTTGATCCTATCAA+AGG 0.553054 5:-11747120 MsG0580024929.01.T01:CDS
GTTATGGCTACTGTCATGGC+TGG 0.556439 5:-11749027 MsG0580024929.01.T01:CDS
TGGTGTTATGGCTACTGTCA+TGG 0.560251 5:-11749031 MsG0580024929.01.T01:CDS
TCTAAGAATAATCTCTTGGA+CGG 0.561921 5:-11750534 MsG0580024929.01.T01:five_prime_UTR
AATTTACACGACCTCTCCTA+AGG 0.568662 5:-11746672 MsG0580024929.01.T01:three_prime_UTR
GACTATATGGTTCCATCATG+AGG 0.572343 5:-11746798 MsG0580024929.01.T01:three_prime_UTR
CTTCATGGTTTGAGAATGCG+TGG 0.577954 5:+11750266 None:intergenic
GGTACTGTAGGCGGAATTGG+AGG 0.579698 5:-11749054 MsG0580024929.01.T01:CDS
CTAGTGTGACATCAACTTGG+AGG 0.579784 5:-11748343 MsG0580024929.01.T01:CDS
AGATGGCAAATGTAGCCAAA+CGG 0.580720 5:-11746731 MsG0580024929.01.T01:three_prime_UTR
AAGAAGACCATGGCAGTCCA+TGG 0.581215 5:+11748239 None:intergenic
TTATCAGCCTCACCTCATGA+TGG 0.583162 5:+11746786 None:intergenic
CAATGGGATCCTTGATAGGA+GGG 0.586366 5:-11747482 MsG0580024929.01.T01:CDS
CCATGGTCTTCTTCACAATG+TGG 0.588693 5:-11748229 MsG0580024929.01.T01:CDS
CAAAGTTCCTTATGAATGTG+AGG 0.588860 5:+11749333 None:intergenic
GCAATGGGATCCTTGATAGG+AGG 0.591989 5:-11747483 MsG0580024929.01.T01:CDS
GTCACTACCATGGACTGCCA+TGG 0.600615 5:-11748246 MsG0580024929.01.T01:CDS
GTGAGGTAACCTAAATCAGA+CGG 0.604891 5:+11749350 None:intergenic
CATCCACGTATAGTAAAACA+AGG 0.606809 5:+11748929 None:intergenic
GCATTATTGGGTCACTACCA+TGG 0.609004 5:-11748256 MsG0580024929.01.T01:CDS
ATTGCTGATAGTTATAGGGA+AGG 0.611447 5:-11749114 MsG0580024929.01.T01:CDS
TTCCAAGTAATTGTCTTACA+GGG 0.612324 5:-11748278 MsG0580024929.01.T01:CDS
TCATTGTCCTGTGTTTGACT+GGG 0.615327 5:+11747238 None:intergenic
GCAAATGTAGCCAAACGGAT+CGG 0.620635 5:-11746726 MsG0580024929.01.T01:three_prime_UTR
TTAACATTGTTAAAGTACAA+GGG 0.623156 5:+11746568 None:intergenic
TGAGGTAACCTAAATCAGAC+GGG 0.623759 5:+11749351 None:intergenic
TTCTTAAATACATAATACAA+TGG 0.630614 5:+11747012 None:intergenic
CAAACTTGCCATCAAAACAA+AGG 0.638977 5:+11748969 None:intergenic
TGAAAGAAGACCCTTTGACA+AGG 0.642266 5:+11747077 None:intergenic
AGGTAGTCCCAGTCAAACAC+AGG 0.645362 5:-11747245 MsG0580024929.01.T01:CDS
ACGCAACCTGCTTAAAATCG+TGG 0.645780 5:+11749196 None:intergenic
TCTGCAAGAATGCCAACCAA+AGG 0.651073 5:+11747165 None:intergenic
GTAAACATGAAACATTTGCA+GGG 0.658169 5:-11746842 MsG0580024929.01.T01:three_prime_UTR
TAATTGCGTGAGATCCGCGA+AGG 0.664156 5:-11750428 MsG0580024929.01.T01:five_prime_UTR
TATGGTTCCATCATGAGGTG+AGG 0.666927 5:-11746793 MsG0580024929.01.T01:three_prime_UTR
GTTTAAATAGACCTTAGGAG+AGG 0.671149 5:+11746661 None:intergenic
ATAACAAGTATACCAGCTAG+TGG 0.681249 5:+11749293 None:intergenic
TATCAAAGGATCTTCAGCTG+AGG 0.682943 5:-11747106 MsG0580024929.01.T01:CDS
GGGACTACCTCAGAAAACAT+CGG 0.685585 5:+11747258 None:intergenic
ATGCTAGTGAGAATTCCGAA+AGG 0.706334 5:-11748876 MsG0580024929.01.T01:intron
CCACATTGTGAAGAAGACCA+TGG 0.717544 5:+11748229 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AACTTAGAATAAAATTTTAA+AGG - Chr5:11747305-11747324 MsG0580024929.01.T01:CDS 10.0%
!!! ACTTAGAATAAAATTTTAAA+GGG - Chr5:11747306-11747325 MsG0580024929.01.T01:CDS 10.0%
!! AAAATAAATCAAAAACTGAA+TGG + Chr5:11748456-11748475 None:intergenic 15.0%
!! ATTGTATTATGTATTTAAGA+AGG - Chr5:11750004-11750023 MsG0580024929.01.T01:intron 15.0%
!! TTCTTAAATACATAATACAA+TGG + Chr5:11750005-11750024 None:intergenic 15.0%
!!! AAATCTATTTTAAAAACCTT+TGG + Chr5:11746926-11746945 None:intergenic 15.0%
!!! ATATAATGAATTGCATTTTA+TGG - Chr5:11747483-11747502 MsG0580024929.01.T01:CDS 15.0%
!!! TATAATGAATTGCATTTTAT+GGG - Chr5:11747484-11747503 MsG0580024929.01.T01:CDS 15.0%
!!! TTTAGTTTTTGTTGAAATTA+CGG - Chr5:11747082-11747101 MsG0580024929.01.T01:CDS 15.0%
!!! TTTTTTTATGCAAAAACTAT+AGG - Chr5:11746980-11746999 MsG0580024929.01.T01:CDS 15.0%
!! AATTGAAAGAAGTAAGTAAA+AGG + Chr5:11747447-11747466 None:intergenic 20.0%
!! ATTAACATTGTTAAAGTACA+AGG + Chr5:11750450-11750469 None:intergenic 20.0%
!! GTAGATTATATAATTGTACA+AGG - Chr5:11749030-11749049 MsG0580024929.01.T01:CDS 20.0%
!! GTTAAATATATGCTTTGATT+TGG - Chr5:11747328-11747347 MsG0580024929.01.T01:CDS 20.0%
!! TAAACAATATAACAGTTTGA+AGG + Chr5:11748537-11748556 None:intergenic 20.0%
!! TAATACCAAACATTTCAAAA+GGG - Chr5:11750318-11750337 MsG0580024929.01.T01:CDS 20.0%
!! TCACTTAAATGCAAAAATAA+GGG + Chr5:11750417-11750436 None:intergenic 20.0%
!! TTAACATTGTTAAAGTACAA+GGG + Chr5:11750449-11750468 None:intergenic 20.0%
!! TTAATACCAAACATTTCAAA+AGG - Chr5:11750317-11750336 MsG0580024929.01.T01:CDS 20.0%
!! TTAATCTAAGAATAATCTCT+TGG - Chr5:11746476-11746495 MsG0580024929.01.T01:three_prime_UTR 20.0%
!! TTTAGTTAGAAGAATATTCA+TGG - Chr5:11746858-11746877 MsG0580024929.01.T01:three_prime_UTR 20.0%
!! TTTCAACAAAAACTAAATCT+TGG + Chr5:11747079-11747098 None:intergenic 20.0%
!!! AACATTCATCAAATCAATTT+TGG + Chr5:11750619-11750638 None:intergenic 20.0%
!!! ACATTCATCAAATCAATTTT+GGG + Chr5:11750618-11750637 None:intergenic 20.0%
!!! ACTTCTTCAAATTTTATGAA+AGG - Chr5:11749377-11749396 MsG0580024929.01.T01:CDS 20.0%
!!! GGTTCCAATATTTTAAAAAT+CGG + Chr5:11749326-11749345 None:intergenic 20.0%
!!! GTTTTTGTTTAACTTAACTA+AGG + Chr5:11746389-11746408 None:intergenic 20.0%
! AAATTTGAGCCTTTATCAAA+CGG + Chr5:11748267-11748286 None:intergenic 25.0%
! AATCTCATCTAAATGATCTT+GGG - Chr5:11746415-11746434 MsG0580024929.01.T01:three_prime_UTR 25.0%
! ACATTACTCATGTGAAATTT+AGG - Chr5:11748184-11748203 MsG0580024929.01.T01:intron 25.0%
! AGCAATAAGTTCAAAGTATA+TGG + Chr5:11750508-11750527 None:intergenic 25.0%
! ATGATGTTTAAATAGACCTT+AGG + Chr5:11750361-11750380 None:intergenic 25.0%
! ATGTAACAAAATACAAGAAC+AGG - Chr5:11749070-11749089 MsG0580024929.01.T01:CDS 25.0%
! ATTCATTGCTGATAGTTATA+GGG - Chr5:11747896-11747915 MsG0580024929.01.T01:intron 25.0%
! CAATTCAATAAAGCAACTAA+TGG + Chr5:11750549-11750568 None:intergenic 25.0%
! CTTTGATATTGAGAAAAATG+AGG - Chr5:11747376-11747395 MsG0580024929.01.T01:CDS 25.0%
! GAAGAAAATCATACAAAGTT+TGG + Chr5:11747425-11747444 None:intergenic 25.0%
! GAATTGTCTTATATTTGCTT+AGG - Chr5:11750563-11750582 MsG0580024929.01.T01:five_prime_UTR 25.0%
! GCAATAAGTTCAAAGTATAT+GGG + Chr5:11750507-11750526 None:intergenic 25.0%
! GTCACTTAAATGCAAAAATA+AGG + Chr5:11750418-11750437 None:intergenic 25.0%
! GTTTATTATGCTAATGATCA+AGG + Chr5:11747285-11747304 None:intergenic 25.0%
! TATCTTGATACAAGTCAATT+TGG + Chr5:11750589-11750608 None:intergenic 25.0%
! TATTATTATCAAAACCTGCA+TGG + Chr5:11749473-11749492 None:intergenic 25.0%
! TCTTCAAGTAAAAGAAAATG+AGG + Chr5:11750198-11750217 None:intergenic 25.0%
!! AGAACAACAATACAGATTTT+TGG - Chr5:11747532-11747551 MsG0580024929.01.T01:CDS 25.0%
!! GATGAATGTTACCTTTTATT+TGG - Chr5:11750629-11750648 MsG0580024929.01.T01:five_prime_UTR 25.0%
!! TCTTTTACTTGAAGACTATA+TGG - Chr5:11750203-11750222 MsG0580024929.01.T01:intron 25.0%
!!! AATTTCCCTTTTGAAATGTT+TGG + Chr5:11750326-11750345 None:intergenic 25.0%
!!! TTTGAAGGCATTTATTTACT+TGG + Chr5:11748522-11748541 None:intergenic 25.0%
!!! TTTGGAGTAGTAAGTTTTAT+TGG - Chr5:11747939-11747958 MsG0580024929.01.T01:intron 25.0%
AAATCTGTTGATCCTATCAA+AGG - Chr5:11749894-11749913 MsG0580024929.01.T01:intron 30.0%
AACTACTGATCAAAATCAGA+TGG + Chr5:11748410-11748429 None:intergenic 30.0%
AAGTTGAGTTCTTGCAATAA+CGG + Chr5:11748902-11748921 None:intergenic 30.0%
AATAGCAAAAAGACTTAGGA+GGG + Chr5:11749505-11749524 None:intergenic 30.0%
AATTCAAACATGCACAAAAC+TGG - Chr5:11747136-11747155 MsG0580024929.01.T01:CDS 30.0%
ACAATTGCTTATACTTGAGA+TGG - Chr5:11750266-11750285 MsG0580024929.01.T01:CDS 30.0%
ACACAAATCTATCCATATTC+AGG - Chr5:11749573-11749592 MsG0580024929.01.T01:intron 30.0%
ACCTAGTGAATTAAACTACA+TGG - Chr5:11748317-11748336 MsG0580024929.01.T01:CDS 30.0%
ACGATAGTTAGACAAAATCA+CGG + Chr5:11747115-11747134 None:intergenic 30.0%
AGGGATGATTCTATCTATAA+TGG - Chr5:11748643-11748662 MsG0580024929.01.T01:intron 30.0%
AGTAAACATGAAACATTTGC+AGG - Chr5:11750171-11750190 MsG0580024929.01.T01:intron 30.0%
AGTAAGTTAAAAACCCAAGT+TGG + Chr5:11749006-11749025 None:intergenic 30.0%
AGTGTCAATCTAAAAAGTAG+AGG + Chr5:11750389-11750408 None:intergenic 30.0%
ATCCAATAGCAAAAAGACTT+AGG + Chr5:11749509-11749528 None:intergenic 30.0%
ATTACACCATTTCTACTACT+TGG + Chr5:11749347-11749366 None:intergenic 30.0%
ATTCCAAGTAATTGTCTTAC+AGG - Chr5:11748735-11748754 MsG0580024929.01.T01:intron 30.0%
ATTCTTGCAGAGAAAATGTT+TGG - Chr5:11749861-11749880 MsG0580024929.01.T01:intron 30.0%
CAAAGAAAGAAAGAAACGTA+AGG + Chr5:11746788-11746807 None:intergenic 30.0%
CAATCTCATCTAAATGATCT+TGG - Chr5:11746414-11746433 MsG0580024929.01.T01:three_prime_UTR 30.0%
CATTCATTGCTGATAGTTAT+AGG - Chr5:11747895-11747914 MsG0580024929.01.T01:intron 30.0%
CTAAATAACAGAACAGAATC+AGG + Chr5:11746843-11746862 None:intergenic 30.0%
CTAAATGGAGTTCAAATCTT+CGG - Chr5:11750147-11750166 MsG0580024929.01.T01:intron 30.0%
CTTAAATGCAAAAATAAGGG+AGG + Chr5:11750414-11750433 None:intergenic 30.0%
GATTCTTTGTAGTCAAATAG+TGG - Chr5:11748367-11748386 MsG0580024929.01.T01:CDS 30.0%
GCTAAATTTCAGCATTCATT+CGG + Chr5:11748481-11748500 None:intergenic 30.0%
GTAAACATGAAACATTTGCA+GGG - Chr5:11750172-11750191 MsG0580024929.01.T01:intron 30.0%
TCCATGTAGTTTAATTCACT+AGG + Chr5:11748321-11748340 None:intergenic 30.0%
TCTAAGAATAATCTCTTGGA+CGG - Chr5:11746480-11746499 MsG0580024929.01.T01:three_prime_UTR 30.0%
TGAATGCTTTCATATGTCTT+TGG - Chr5:11748584-11748603 MsG0580024929.01.T01:intron 30.0%
TGAATTAAACTACATGGAAC+CGG - Chr5:11748323-11748342 MsG0580024929.01.T01:CDS 30.0%
TTATTGCAAGAACTCAACTT+TGG - Chr5:11748902-11748921 MsG0580024929.01.T01:CDS 30.0%
TTATTTGTCAGTTAGTCATG+AGG + Chr5:11748563-11748582 None:intergenic 30.0%
TTCATAAGGAACTTTGTTCA+AGG - Chr5:11747688-11747707 MsG0580024929.01.T01:intron 30.0%
TTCCAAGTAATTGTCTTACA+GGG - Chr5:11748736-11748755 MsG0580024929.01.T01:intron 30.0%
TTTGTCATCCGATTCAATAA+TGG + Chr5:11749197-11749216 None:intergenic 30.0%
TTTGTGAATTTCTCTTGCTT+TGG - Chr5:11746626-11746645 MsG0580024929.01.T01:three_prime_UTR 30.0%
! AAAAAAGAGTGTGATCGAAA+AGG + Chr5:11749694-11749713 None:intergenic 30.0%
! AAATCTGTATTGTTGTTCTG+TGG + Chr5:11747531-11747550 None:intergenic 30.0%
! AACTTTGATGACAGATTTAG+TGG + Chr5:11748710-11748729 None:intergenic 30.0%
! AGAAAACTAGTTACTGATTG+AGG + Chr5:11749669-11749688 None:intergenic 30.0%
! AGACTTAGAGAATTTTCCAA+AGG - Chr5:11746907-11746926 MsG0580024929.01.T01:three_prime_UTR 30.0%
! AGATGTTGTGCTATGTTTTT+GGG + Chr5:11746691-11746710 None:intergenic 30.0%
! AGCTATAAATGGATTTGGTT+TGG - Chr5:11747848-11747867 MsG0580024929.01.T01:intron 30.0%
! ATGGGAGAAAATCTTTTTCT+TGG + Chr5:11748113-11748132 None:intergenic 30.0%
! GAAAACGATGATTTGGATTT+GGG + Chr5:11746723-11746742 None:intergenic 30.0%
! GACCTTTCTCTTGTTTAATT+CGG - Chr5:11746518-11746537 MsG0580024929.01.T01:three_prime_UTR 30.0%
! TAGATGTTGTGCTATGTTTT+TGG + Chr5:11746692-11746711 None:intergenic 30.0%
!!! AATCCTTGTTTTACTATACG+TGG - Chr5:11748082-11748101 MsG0580024929.01.T01:intron 30.0%
!!! CGGTCCGATTTTTAAAATAT+TGG - Chr5:11749319-11749338 MsG0580024929.01.T01:CDS 30.0%
!!! GTAAGTTTTATTGGTACTGT+AGG - Chr5:11747948-11747967 MsG0580024929.01.T01:intron 30.0%
!!! TCGATCACACTCTTTTTTAT+GGG - Chr5:11749696-11749715 MsG0580024929.01.T01:intron 30.0%
!!! TTCGATCACACTCTTTTTTA+TGG - Chr5:11749695-11749714 MsG0580024929.01.T01:intron 30.0%
AAAGGGTCTTCTTTCAATGA+TGG - Chr5:11749944-11749963 MsG0580024929.01.T01:intron 35.0%
AACTATAAGCTGGAATGGTA+CGG - Chr5:11749722-11749741 MsG0580024929.01.T01:intron 35.0%
AATTTGGAGATCTCGCTAAT+TGG + Chr5:11749156-11749175 None:intergenic 35.0%
ACAAGCAGACAGAGTTAAAA+GGG + Chr5:11750117-11750136 None:intergenic 35.0%
ACAATGTGGTTCGAACTAAT+TGG - Chr5:11748799-11748818 MsG0580024929.01.T01:intron 35.0%
AGCTCAATACCGTTTGATAA+AGG - Chr5:11748255-11748274 MsG0580024929.01.T01:CDS 35.0%
ATAACAAGTATACCAGCTAG+TGG + Chr5:11747724-11747743 None:intergenic 35.0%
ATTCATTGTGTCAAGCAAGT+AGG + Chr5:11749443-11749462 None:intergenic 35.0%
ATTCTCACTAGCATCTTGAA+TGG + Chr5:11748132-11748151 None:intergenic 35.0%
ATTGCTGATAGTTATAGGGA+AGG - Chr5:11747900-11747919 MsG0580024929.01.T01:intron 35.0%
CAAACTTGCCATCAAAACAA+AGG + Chr5:11748048-11748067 None:intergenic 35.0%
CAAAGTTCCTTATGAATGTG+AGG + Chr5:11747684-11747703 None:intergenic 35.0%
CAAATCTCATGTGGTATCTT+TGG + Chr5:11748948-11748967 None:intergenic 35.0%
CAATAGCAAAAAGACTTAGG+AGG + Chr5:11749506-11749525 None:intergenic 35.0%
CAGTGCGTTAAAAACTAAAC+TGG - Chr5:11749126-11749145 MsG0580024929.01.T01:CDS 35.0%
CATCCACGTATAGTAAAACA+AGG + Chr5:11748088-11748107 None:intergenic 35.0%
CGAAGATTTGAACTCCATTT+AGG + Chr5:11750149-11750168 None:intergenic 35.0%
CGATTGTCTTGTCTTATCAT+GGG - Chr5:11746654-11746673 MsG0580024929.01.T01:three_prime_UTR 35.0%
CTAAGAAGAAACCATGAGAA+TGG + Chr5:11749639-11749658 None:intergenic 35.0%
GAATGTTGTTCCTTACCTTT+CGG + Chr5:11748156-11748175 None:intergenic 35.0%
GAATTAAACTACATGGAACC+GGG - Chr5:11748324-11748343 MsG0580024929.01.T01:CDS 35.0%
GCAAGTTTGAGTGCATTTAT+TGG - Chr5:11748059-11748078 MsG0580024929.01.T01:intron 35.0%
GTCCGAATTAAACAAGAGAA+AGG + Chr5:11746523-11746542 None:intergenic 35.0%
GTTTAAATAGACCTTAGGAG+AGG + Chr5:11750356-11750375 None:intergenic 35.0%
TAGGTTACCTCACATTCATA+AGG - Chr5:11747674-11747693 MsG0580024929.01.T01:intron 35.0%
TCAATGATGGCAATTCCATT+TGG - Chr5:11749957-11749976 MsG0580024929.01.T01:intron 35.0%
TCGATTGTCTTGTCTTATCA+TGG - Chr5:11746653-11746672 MsG0580024929.01.T01:three_prime_UTR 35.0%
TCTCCAAATTATGGCTCAAT+CGG - Chr5:11749166-11749185 MsG0580024929.01.T01:CDS 35.0%
TTAAATATGTCCGATCCGTT+TGG + Chr5:11750301-11750320 None:intergenic 35.0%
TTAGCGAGATCTCCAAATTA+TGG - Chr5:11749157-11749176 MsG0580024929.01.T01:CDS 35.0%
TTATGGGACTAACTATAAGC+TGG - Chr5:11749712-11749731 MsG0580024929.01.T01:intron 35.0%
TTCACTCATTCTTATCAACC+TGG - Chr5:11747564-11747583 MsG0580024929.01.T01:intron 35.0%
TTCTCACTAGCATCTTGAAT+GGG + Chr5:11748131-11748150 None:intergenic 35.0%
TTGGAACCAAGTAGTAGAAA+TGG - Chr5:11749338-11749357 MsG0580024929.01.T01:CDS 35.0%
TTGTTGGAGTGAAAAGTAGT+TGG + Chr5:11748977-11748996 None:intergenic 35.0%
TTTCCCTAAATTTCTGATCC+CGG + Chr5:11748345-11748364 None:intergenic 35.0%
! ATTGTCTTACAGGGCATTAT+TGG - Chr5:11748745-11748764 MsG0580024929.01.T01:intron 35.0%
! ATTTTAAGCAGGTTGCGTTT+TGG - Chr5:11747823-11747842 MsG0580024929.01.T01:intron 35.0%
! GCATTTGATAGAGCTTTTGA+AGG - Chr5:11749804-11749823 MsG0580024929.01.T01:intron 35.0%
! GGAAAACGATGATTTGGATT+TGG + Chr5:11746724-11746743 None:intergenic 35.0%
! TAGACCAACAATACTTGCTA+TGG - Chr5:11747753-11747772 MsG0580024929.01.T01:intron 35.0%
! TGCTGGAAGAAGATTTTCAT+CGG + Chr5:11747608-11747627 None:intergenic 35.0%
! TGGAGAGCTATAAATGGATT+TGG - Chr5:11747843-11747862 MsG0580024929.01.T01:intron 35.0%
! TTGTCTTACAGGGCATTATT+GGG - Chr5:11748746-11748765 MsG0580024929.01.T01:intron 35.0%
! TTTGCATTCTAGCATTTTCG+CGG + Chr5:11750031-11750050 None:intergenic 35.0%
!! AGACCAACAATACTTGCTAT+GGG - Chr5:11747754-11747773 MsG0580024929.01.T01:intron 35.0%
!! CTCCTAAGTCTTTTTGCTAT+TGG - Chr5:11749504-11749523 MsG0580024929.01.T01:intron 35.0%
!! GAAGGCATTTATTTACTTGG+AGG + Chr5:11748519-11748538 None:intergenic 35.0%
!! TTAGTTTTTAACGCACTGCT+TGG + Chr5:11749124-11749143 None:intergenic 35.0%
!! TTTGCTATTGGATGTGCAAT+GGG - Chr5:11749516-11749535 MsG0580024929.01.T01:intron 35.0%
!!! AGTTTTATTGGTACTGTAGG+CGG - Chr5:11747951-11747970 MsG0580024929.01.T01:intron 35.0%
!!! TTTTGCTATTGGATGTGCAA+TGG - Chr5:11749515-11749534 MsG0580024929.01.T01:intron 35.0%
AATGCAAACCCTGAAAGAAG+AGG - Chr5:11750043-11750062 MsG0580024929.01.T01:intron 40.0%
AATTTACACGACCTCTCCTA+AGG - Chr5:11750342-11750361 MsG0580024929.01.T01:CDS 40.0%
ACATCATCTCCTCTTCTTTC+AGG + Chr5:11750055-11750074 None:intergenic 40.0%
AGATGGCAAATGTAGCCAAA+CGG - Chr5:11750283-11750302 MsG0580024929.01.T01:CDS 40.0%
AGTGAGAATTCCGAAAGGTA+AGG - Chr5:11748143-11748162 MsG0580024929.01.T01:intron 40.0%
AGTTATAGGGAAGGAGTTAG+AGG - Chr5:11747909-11747928 MsG0580024929.01.T01:intron 40.0%
ATCATTGTCCTGTGTTTGAC+TGG + Chr5:11749780-11749799 None:intergenic 40.0%
ATGCTAGTGAGAATTCCGAA+AGG - Chr5:11748138-11748157 MsG0580024929.01.T01:intron 40.0%
ATGCTAGTGTGACATCAACT+TGG - Chr5:11748668-11748687 MsG0580024929.01.T01:intron 40.0%
CACAAGCAACACAATCCAAA+TGG + Chr5:11749975-11749994 None:intergenic 40.0%
CACAAGCAGACAGAGTTAAA+AGG + Chr5:11750118-11750137 None:intergenic 40.0%
CACATGATTCGACCTGAATA+TGG + Chr5:11749588-11749607 None:intergenic 40.0%
CATCATCTCCTCTTCTTTCA+GGG + Chr5:11750054-11750073 None:intergenic 40.0%
CCAACAATAGCATCCAACTT+GGG - Chr5:11748990-11749009 MsG0580024929.01.T01:CDS 40.0%
CGGGTCAACCATTATTGAAT+CGG - Chr5:11749186-11749205 MsG0580024929.01.T01:CDS 40.0%
CTAAACGCTCACTTGTATGT+TGG + Chr5:11747006-11747025 None:intergenic 40.0%
CTAACTTCTTTGTAGACTGC+TGG + Chr5:11747625-11747644 None:intergenic 40.0%
CTCCAAATTATGGCTCAATC+GGG - Chr5:11749167-11749186 MsG0580024929.01.T01:CDS 40.0%
GAACCGGGATCAGAAATTTA+GGG - Chr5:11748339-11748358 MsG0580024929.01.T01:CDS 40.0%
GACTATATGGTTCCATCATG+AGG - Chr5:11750216-11750235 MsG0580024929.01.T01:intron 40.0%
GAGTACTCACTTCATCTTCA+TGG + Chr5:11746766-11746785 None:intergenic 40.0%
GCGCAATTTAGTGCCTTTAT+GGG - Chr5:11749609-11749628 MsG0580024929.01.T01:intron 40.0%
GGAAGTGGAAAACGATGATT+TGG + Chr5:11746730-11746749 None:intergenic 40.0%
GGACTAACTATAAGCTGGAA+TGG - Chr5:11749717-11749736 MsG0580024929.01.T01:intron 40.0%
GTATCTTTGGACGACAAGAA+AGG + Chr5:11748935-11748954 None:intergenic 40.0%
GTGAGGTAACCTAAATCAGA+CGG + Chr5:11747667-11747686 None:intergenic 40.0%
GTGTCAAGCAAGTAGGTAAA+AGG + Chr5:11749436-11749455 None:intergenic 40.0%
TACCGTCATTTCGTCAAACT+CGG + Chr5:11747036-11747055 None:intergenic 40.0%
TATCAAAGGATCTTCAGCTG+AGG - Chr5:11749908-11749927 MsG0580024929.01.T01:intron 40.0%
TATCAACCTGGCTGCTATAA+TGG - Chr5:11747576-11747595 MsG0580024929.01.T01:intron 40.0%
TCAGCTGAAGATCCTTTGAT+AGG + Chr5:11749909-11749928 None:intergenic 40.0%
TCATTGTCCTGTGTTTGACT+GGG + Chr5:11749779-11749798 None:intergenic 40.0%
TCCAACAATAGCATCCAACT+TGG - Chr5:11748989-11749008 MsG0580024929.01.T01:CDS 40.0%
TGAAAGAAGACCCTTTGACA+AGG + Chr5:11749940-11749959 None:intergenic 40.0%
TGAGAATGGAATGCCCATAA+AGG + Chr5:11749625-11749644 None:intergenic 40.0%
TGAGGTAACCTAAATCAGAC+GGG + Chr5:11747666-11747685 None:intergenic 40.0%
TGCCCTGTAAGACAATTACT+TGG + Chr5:11748741-11748760 None:intergenic 40.0%
TGTAGTCAAATAGTGGCTGT+AGG - Chr5:11748374-11748393 MsG0580024929.01.T01:intron 40.0%
TTATGGGCATTCCATTCTCA+TGG - Chr5:11749625-11749644 MsG0580024929.01.T01:intron 40.0%
TTCTCCAAGCATCAGTTACA+CGG - Chr5:11747208-11747227 MsG0580024929.01.T01:CDS 40.0%
! AAATTTTGTGCTCGATCGGA+TGG - Chr5:11748281-11748300 MsG0580024929.01.T01:CDS 40.0%
! AATGAATTTGCTCACCATGC+AGG - Chr5:11749456-11749475 MsG0580024929.01.T01:CDS 40.0%
! AGAAGAGTAGTTTGCGTGAA+CGG - Chr5:11750089-11750108 MsG0580024929.01.T01:intron 40.0%
! GCTCAAATTTTGTGCTCGAT+CGG - Chr5:11748277-11748296 MsG0580024929.01.T01:CDS 40.0%
! GTTAGTGAAGCATTCAATGC+AGG - Chr5:11747640-11747659 MsG0580024929.01.T01:intron 40.0%
! GTTCCCATAGCAAGTATTGT+TGG + Chr5:11747760-11747779 None:intergenic 40.0%
!! AAATGCACCGATGTTTTCTG+AGG - Chr5:11749749-11749768 MsG0580024929.01.T01:intron 40.0%
!! ATCAACTTGGAGGTACTCTT+GGG - Chr5:11748681-11748700 MsG0580024929.01.T01:intron 40.0%
!!! AGTTTTGGGGAATAGATGGA+TGG - Chr5:11748015-11748034 MsG0580024929.01.T01:intron 40.0%
!!! CAGAAGTTTTGGGGAATAGA+TGG - Chr5:11748011-11748030 MsG0580024929.01.T01:intron 40.0%
!!! GAGATGTGCCTTTGTTTTGA+TGG - Chr5:11748037-11748056 MsG0580024929.01.T01:intron 40.0%
!!! GCGTTTTGGAGAGCTATAAA+TGG - Chr5:11747837-11747856 MsG0580024929.01.T01:intron 40.0%
ACGCAACCTGCTTAAAATCG+TGG + Chr5:11747821-11747840 None:intergenic 45.0%
ACTCTGTCTGCTTGTGACTT+CGG - Chr5:11750122-11750141 MsG0580024929.01.T01:intron 45.0%
AGCTATTGACCCTCCTATCA+AGG + Chr5:11749544-11749563 None:intergenic 45.0%
ATTGGTACTGTAGGCGGAAT+TGG - Chr5:11747957-11747976 MsG0580024929.01.T01:intron 45.0%
CAATGGGATCCTTGATAGGA+GGG - Chr5:11749532-11749551 MsG0580024929.01.T01:intron 45.0%
CAGTCGGTTAAGCCAGAAAT+CGG + Chr5:11749287-11749306 None:intergenic 45.0%
CCACATTGTGAAGAAGACCA+TGG + Chr5:11748788-11748807 None:intergenic 45.0%
CCATGGTCTTCTTCACAATG+TGG - Chr5:11748785-11748804 MsG0580024929.01.T01:intron 45.0%
CGCGCAATTTAGTGCCTTTA+TGG - Chr5:11749608-11749627 MsG0580024929.01.T01:intron 45.0%
CTAGTGTGACATCAACTTGG+AGG - Chr5:11748671-11748690 MsG0580024929.01.T01:intron 45.0%
CTTCATGGTTTGAGAATGCG+TGG + Chr5:11746751-11746770 None:intergenic 45.0%
CTTGTGACTTCGGTCCTAAA+TGG - Chr5:11750132-11750151 MsG0580024929.01.T01:intron 45.0%
GACCCGATTGAGCCATAATT+TGG + Chr5:11749172-11749191 None:intergenic 45.0%
GCAAATGTAGCCAAACGGAT+CGG - Chr5:11750288-11750307 MsG0580024929.01.T01:CDS 45.0%
GCAATGAATGACTGCAATGC+TGG + Chr5:11747885-11747904 None:intergenic 45.0%
GCATTATTGGGTCACTACCA+TGG - Chr5:11748758-11748777 MsG0580024929.01.T01:intron 45.0%
GCTAACAGCAGCTGTAGATA+AGG + Chr5:11747793-11747812 None:intergenic 45.0%
GGAACCGGGATCAGAAATTT+AGG - Chr5:11748338-11748357 MsG0580024929.01.T01:CDS 45.0%
GGAGTTAGAGGAGTTGGATT+TGG - Chr5:11747921-11747940 MsG0580024929.01.T01:intron 45.0%
GGGACTACCTCAGAAAACAT+CGG + Chr5:11749759-11749778 None:intergenic 45.0%
TACTCCGTGTAACTGATGCT+TGG + Chr5:11747215-11747234 None:intergenic 45.0%
TATGGTTCCATCATGAGGTG+AGG - Chr5:11750221-11750240 MsG0580024929.01.T01:intron 45.0%
TCTGCAAGAATGCCAACCAA+AGG + Chr5:11749852-11749871 None:intergenic 45.0%
TGGCACTCTCAAATCTCATG+TGG + Chr5:11748957-11748976 None:intergenic 45.0%
TGTGCAATGGGATCCTTGAT+AGG - Chr5:11749528-11749547 MsG0580024929.01.T01:intron 45.0%
TTATCAGCCTCACCTCATGA+TGG + Chr5:11750231-11750250 None:intergenic 45.0%
TTGCTATGGGAACATTCTGC+GGG - Chr5:11747767-11747786 MsG0580024929.01.T01:intron 45.0%
! AATCAGCTTTGTGTGTCAGC+AGG - Chr5:11748623-11748642 MsG0580024929.01.T01:intron 45.0%
! ATCAGCTTTGTGTGTCAGCA+GGG - Chr5:11748624-11748643 MsG0580024929.01.T01:intron 45.0%
! CCCAAGTTGGATGCTATTGT+TGG + Chr5:11748993-11749012 None:intergenic 45.0%
! CTTGCTATGGGAACATTCTG+CGG - Chr5:11747766-11747785 MsG0580024929.01.T01:intron 45.0%
!! AAATCGGCTAGTTTGCTGGT+TGG + Chr5:11749271-11749290 None:intergenic 45.0%
!! ATGGCTGGTCAGAAGTTTTG+GGG - Chr5:11748002-11748021 MsG0580024929.01.T01:intron 45.0%
!! CATCAACTTGGAGGTACTCT+TGG - Chr5:11748680-11748699 MsG0580024929.01.T01:intron 45.0%
!! CATGGCTGGTCAGAAGTTTT+GGG - Chr5:11748001-11748020 MsG0580024929.01.T01:intron 45.0%
!! GCTGCTGACTCAATGAATGT+AGG + Chr5:11748238-11748257 None:intergenic 45.0%
!! TCATGGCTGGTCAGAAGTTT+TGG - Chr5:11748000-11748019 MsG0580024929.01.T01:intron 45.0%
!! TGGTGTTATGGCTACTGTCA+TGG - Chr5:11747983-11748002 MsG0580024929.01.T01:intron 45.0%
AAAAATCGGACCGAACCAGC+CGG + Chr5:11749312-11749331 None:intergenic 50.0%
AAGAAGACCATGGCAGTCCA+TGG + Chr5:11748778-11748797 None:intergenic 50.0%
AATGCAGGCCCGTCTGATTT+AGG - Chr5:11747655-11747674 MsG0580024929.01.T01:intron 50.0%
AGGGAAGGAGTTAGAGGAGT+TGG - Chr5:11747915-11747934 MsG0580024929.01.T01:intron 50.0%
AGGTAGTCCCAGTCAAACAC+AGG - Chr5:11749769-11749788 MsG0580024929.01.T01:intron 50.0%
CGCCGAGTTTGACGAAATGA+CGG - Chr5:11747031-11747050 MsG0580024929.01.T01:CDS 50.0%
CTCTTCTGTTGCAGCACCTT+TGG - Chr5:11749833-11749852 MsG0580024929.01.T01:intron 50.0%
GAGGCTCTTGCCTTGTCAAA+GGG - Chr5:11749927-11749946 MsG0580024929.01.T01:intron 50.0%
GCAATGGGATCCTTGATAGG+AGG - Chr5:11749531-11749550 MsG0580024929.01.T01:intron 50.0%
GGACTATCATCACCACTAGC+TGG - Chr5:11747709-11747728 MsG0580024929.01.T01:intron 50.0%
GGTTTGAGAATGCGTGGAAG+TGG + Chr5:11746745-11746764 None:intergenic 50.0%
GTTATGGCTACTGTCATGGC+TGG - Chr5:11747987-11748006 MsG0580024929.01.T01:intron 50.0%
TAATTGCGTGAGATCCGCGA+AGG - Chr5:11746586-11746605 MsG0580024929.01.T01:three_prime_UTR 50.0%
TCTGTTGCAGCACCTTTGGT+TGG - Chr5:11749837-11749856 MsG0580024929.01.T01:intron 50.0%
TGAGGCTCTTGCCTTGTCAA+AGG - Chr5:11749926-11749945 MsG0580024929.01.T01:intron 50.0%
! CCAGCAAACTAGCCGATTTC+TGG - Chr5:11749272-11749291 MsG0580024929.01.T01:intron 50.0%
! CGCTTGCCACGATTTTAAGC+AGG - Chr5:11747812-11747831 MsG0580024929.01.T01:intron 50.0%
! CGGAATTGGAGGTGGTGTTA+TGG - Chr5:11747971-11747990 MsG0580024929.01.T01:intron 50.0%
! TCTGGCTTAACCGACTGAAC+CGG - Chr5:11749290-11749309 MsG0580024929.01.T01:intron 50.0%
!! CCAGAAATCGGCTAGTTTGC+TGG + Chr5:11749275-11749294 None:intergenic 50.0%
!! TCTTGCAATAACGGTGCTGC+TGG + Chr5:11748893-11748912 None:intergenic 50.0%
ACTGTAGGCGGAATTGGAGG+TGG - Chr5:11747963-11747982 MsG0580024929.01.T01:intron 55.0%
CACCAAATCAGCGTCCTTCG+CGG + Chr5:11746603-11746622 None:intergenic 55.0%
CACGCTCCATTATAGCAGCC+AGG + Chr5:11747585-11747604 None:intergenic 55.0%
GGTACTGTAGGCGGAATTGG+AGG - Chr5:11747960-11747979 MsG0580024929.01.T01:intron 55.0%
GTAGGAGATCGCTCTCTACG+AGG + Chr5:11748220-11748239 None:intergenic 55.0%
! ATCCGCGAAGGACGCTGATT+TGG - Chr5:11746598-11746617 MsG0580024929.01.T01:three_prime_UTR 55.0%
! GTCACTACCATGGACTGCCA+TGG - Chr5:11748768-11748787 MsG0580024929.01.T01:intron 55.0%
GCTTAACCGACTGAACCGGC+TGG - Chr5:11749294-11749313 MsG0580024929.01.T01:intron 60.0%
! ACCGAACCAGCCGGTTCAGT+CGG + Chr5:11749303-11749322 None:intergenic 60.0%
! ACCGACTGAACCGGCTGGTT+CGG - Chr5:11749299-11749318 MsG0580024929.01.T01:intron 60.0%
!! CGCGAAGGACGCTGATTTGG+TGG - Chr5:11746601-11746620 MsG0580024929.01.T01:three_prime_UTR 60.0%
Chromosome Type Strat End Strand Name
Chr5 gene 11746382 11750654 11746382 ID=MsG0580024929.01;Name=MsG0580024929.01
Chr5 mRNA 11746382 11750654 11746382 ID=MsG0580024929.01.T01;Parent=MsG0580024929.01;Name=MsG0580024929.01.T01;_AED=0.25;_eAED=0.25;_QI=290|0.75|0.6|1|0.75|0.6|5|578|477
Chr5 exon 11746382 11747558 11746382 ID=MsG0580024929.01.T01:exon:3190;Parent=MsG0580024929.01.T01
Chr5 exon 11748216 11748391 11748216 ID=MsG0580024929.01.T01:exon:3189;Parent=MsG0580024929.01.T01
Chr5 exon 11748877 11749234 11748877 ID=MsG0580024929.01.T01:exon:3188;Parent=MsG0580024929.01.T01
Chr5 exon 11749306 11749502 11749306 ID=MsG0580024929.01.T01:exon:3187;Parent=MsG0580024929.01.T01
Chr5 exon 11750261 11750654 11750261 ID=MsG0580024929.01.T01:exon:3186;Parent=MsG0580024929.01.T01
Chr5 five_prime_UTR 11750365 11750654 11750365 ID=MsG0580024929.01.T01:five_prime_utr;Parent=MsG0580024929.01.T01
Chr5 CDS 11750261 11750364 11750261 ID=MsG0580024929.01.T01:cds;Parent=MsG0580024929.01.T01
Chr5 CDS 11749306 11749502 11749306 ID=MsG0580024929.01.T01:cds;Parent=MsG0580024929.01.T01
Chr5 CDS 11748877 11749234 11748877 ID=MsG0580024929.01.T01:cds;Parent=MsG0580024929.01.T01
Chr5 CDS 11748216 11748391 11748216 ID=MsG0580024929.01.T01:cds;Parent=MsG0580024929.01.T01
Chr5 CDS 11746960 11747558 11746960 ID=MsG0580024929.01.T01:cds;Parent=MsG0580024929.01.T01
Chr5 three_prime_UTR 11746382 11746959 11746382 ID=MsG0580024929.01.T01:three_prime_utr;Parent=MsG0580024929.01.T01
Gene Sequence

>MsG0580024929.01.T01

ATGGGACTCTTTCGAACCCAAAAACATAGCACAACATCTATTCTTCTACCCAAATCCAAATCATCGTTTTCCACTTCCACGCATTCTCAAACCATGAAGATGAAAACAACAATACAGATTTTTGGCGTATCTCTTTCACTCATTCTTATCAACCTGGCTGCTATAATGGAGCGTGCCGATGAAAATCTTCTTCCAGCAGTCTACAAAGAAGTTAGTGAAGCATTCAATGCAGGCCCGTCTGATTTAGGTTACCTCACATTCATAAGGAACTTTGTTCAAGGACTATCATCACCACTAGCTGCTGCTGTTAGCGCTTGCCACGATTTTAAGCAGGTTGCGTTTTGGAGAGCTATAAATGGATTTGGTTTGGCAATTGTGATTCCAGCATTGCAGTCATTCATTGCTGATAGTTATAGGGAAGGAGTTAGAGGAGTTGGATTTGGAGTAGTAAGTTTTATTGGTACTGTAGGCGGAATTGGAGGTGGTGTTATGGCTACTGTCATGGCTGGTCAGAAGTTTTGGGGAATAGATGGATGGAGATGTGCCTTTGTTTTGATGGCAAGTTTGAGTGCATTTATTGGAATCCTTGTTTTACTATACGTGGATGATCCAAGAAAAAGATTTTCTCCCATTCAAGATGCTAGTGAGAATTCCGAAAGGGATGATTCTATCTATAATGGCAATGCTAGTGTGACATCAACTTGGAGGTACTCTTGGGCAGCCACTAAATCTGTCATCAAAGTTCAAACATTCCAAGTAATTGTCTTACAGGGCATTATTGGGTCACTACCATGGACTGCCATGGTCTTCTTCACAATGTGGTTCGAACTAATTGGTTTTGATAATAATACTTCAGCAACCCTCCTAAGTCTTTTTGCTATTGGATGTGCAATGGGATCCTTGATAGGAGGGTCAATAGCTGATCAACTGACACAAATCTATCCATATTCAGGTCGAATCATGTGCGCGCAATTTAGTGCCTTTATGGGCATTCCATTCTCATGGTTTCTTCTTAGAGTGATACCTCAATCAGTAACTAGTTTTCTTACCTTTTCGATCACACTCTTTTTTATGGGACTAACTATAAGCTGGAATGGTACGGCTGCAAATGCACCGATGTTTTCTGAGGTAGTCCCAGTCAAACACAGGACAATGATTTATGCATTTGATAGAGCTTTTGAAGGCTCGTTCTCTTCTGTTGCAGCACCTTTGGTTGGCATTCTTGCAGAGAAAATGTTTGGCTACAATTCTAAATCTGTTGATCCTATCAAAGGATCTTCAGCTGAGGCTCTTGCCTTGTCAAAGGGTCTTCTTTCAATGATGGCAATTCCATTTGGATTGTGTTGCTTGTGTTACACGCCATTGTATTATGTATTTAAGAAGGACCGCGAAAATGCTAGAATGCAAACCCTGAAAGAAGAGGAGATGATGTGA
Protein sequence

>MsG0580024929.01.T01

MGLFRTQKHSTTSILLPKSKSSFSTSTHSQTMKMKTTIQIFGVSLSLILINLAAIMERADENLLPAVYKEVSEAFNAGPSDLGYLTFIRNFVQGLSSPLAAAVSACHDFKQVAFWRAINGFGLAIVIPALQSFIADSYREGVRGVGFGVVSFIGTVGGIGGGVMATVMAGQKFWGIDGWRCAFVLMASLSAFIGILVLLYVDDPRKRFSPIQDASENSERDDSIYNGNASVTSTWRYSWAATKSVIKVQTFQVIVLQGIIGSLPWTAMVFFTMWFELIGFDNNTSATLLSLFAIGCAMGSLIGGSIADQLTQIYPYSGRIMCAQFSAFMGIPFSWFLLRVIPQSVTSFLTFSITLFFMGLTISWNGTAANAPMFSEVVPVKHRTMIYAFDRAFEGSFSSVAAPLVGILAEKMFGYNSKSVDPIKGSSAEALALSKGLLSMMAIPFGLCCLCYTPLYYVFKKDRENARMQTLKEEEMM*