Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780039978.01.T01 | XP_003624398.1 | 97.5 | 120 | 3 | 0 | 1 | 120 | 7 | 126 | 2.69E-79 | 239 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780039978.01.T01 | G7KV85 | 97.500 | 120 | 3 | 0 | 1 | 120 | 7 | 126 | 1.28e-79 | 239 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080047831.01 | MsG0780039978.01 | 0.846400 | 2.224793e-59 | 3.824763e-56 |
| MsG0080047999.01 | MsG0780039978.01 | 0.857589 | 1.472508e-62 | 3.653111e-59 |
| MsG0080048036.01 | MsG0780039978.01 | 0.847893 | 8.666278e-60 | 1.562864e-56 |
| MsG0080048301.01 | MsG0780039978.01 | 0.817505 | 3.185553e-52 | 2.324172e-49 |
| MsG0080048312.01 | MsG0780039978.01 | 0.809405 | 1.922939e-50 | 1.128080e-47 |
| MsG0080048345.01 | MsG0780039978.01 | 0.844819 | 5.971001e-59 | 9.756384e-56 |
| MsG0080048347.01 | MsG0780039978.01 | 0.874416 | 6.869901e-68 | 3.090081e-64 |
| MsG0080048348.01 | MsG0780039978.01 | 0.834680 | 2.605125e-56 | 3.113712e-53 |
| MsG0080048349.01 | MsG0780039978.01 | 0.841356 | 4.993181e-58 | 7.317849e-55 |
| MsG0080048350.01 | MsG0780039978.01 | 0.857000 | 2.198957e-62 | 5.347065e-59 |
| MsG0080048352.01 | MsG0780039978.01 | 0.886504 | 3.229166e-72 | 2.312911e-68 |
| MsG0080048595.01 | MsG0780039978.01 | 0.801896 | 7.252839e-49 | 3.504215e-46 |
| MsG0080048889.01 | MsG0780039978.01 | 0.832452 | 9.375756e-56 | 1.048349e-52 |
| MsG0080048992.01 | MsG0780039978.01 | -0.803597 | 3.231045e-49 | 1.630393e-46 |
| MsG0080049018.01 | MsG0780039978.01 | -0.803486 | 3.406674e-49 | 1.714079e-46 |
| MsG0080049023.01 | MsG0780039978.01 | -0.803238 | 3.835355e-49 | 1.917441e-46 |
| MsG0080049066.01 | MsG0780039978.01 | -0.820897 | 5.380150e-53 | 4.311844e-50 |
| MsG0080049133.01 | MsG0780039978.01 | -0.840048 | 1.099231e-57 | 1.547217e-54 |
| MsG0180000147.01 | MsG0780039978.01 | 0.817793 | 2.742926e-52 | 2.017111e-49 |
| MsG0180000148.01 | MsG0780039978.01 | 0.835224 | 1.900253e-56 | 2.309066e-53 |
| MsG0180000234.01 | MsG0780039978.01 | 0.823525 | 1.321445e-53 | 1.140621e-50 |
| MsG0180000322.01 | MsG0780039978.01 | -0.860308 | 2.261166e-63 | 6.153045e-60 |
| MsG0180000337.01 | MsG0780039978.01 | 0.867697 | 1.130779e-65 | 3.984074e-62 |
| MsG0180000459.01 | MsG0780039978.01 | -0.808661 | 2.775041e-50 | 1.595897e-47 |
| MsG0180000583.01 | MsG0780039978.01 | 0.835842 | 1.325693e-56 | 1.640864e-53 |
| MsG0180000929.01 | MsG0780039978.01 | 0.842710 | 2.190272e-58 | 3.348996e-55 |
| MsG0180000930.01 | MsG0780039978.01 | 0.809557 | 1.783999e-50 | 1.050764e-47 |
| MsG0180001054.01 | MsG0780039978.01 | -0.814442 | 1.537173e-51 | 1.031568e-48 |
| MsG0180001108.01 | MsG0780039978.01 | 0.823904 | 1.077274e-53 | 9.398990e-51 |
| MsG0180001116.01 | MsG0780039978.01 | -0.843247 | 1.576013e-58 | 2.450835e-55 |
| MsG0180001463.01 | MsG0780039978.01 | 0.840170 | 1.021746e-57 | 1.443519e-54 |
| MsG0180001513.01 | MsG0780039978.01 | 0.821934 | 3.100482e-53 | 2.557995e-50 |
| MsG0180001533.01 | MsG0780039978.01 | 0.801150 | 1.031465e-48 | 4.890394e-46 |
| MsG0180001691.01 | MsG0780039978.01 | 0.806020 | 1.007387e-49 | 5.410026e-47 |
| MsG0180001797.01 | MsG0780039978.01 | 0.803678 | 3.109146e-49 | 1.572011e-46 |
| MsG0180002099.01 | MsG0780039978.01 | -0.840669 | 7.566464e-58 | 1.085504e-54 |
| MsG0180002274.01 | MsG0780039978.01 | 0.826396 | 2.775465e-54 | 2.599816e-51 |
| MsG0180002425.01 | MsG0780039978.01 | -0.811806 | 5.822192e-51 | 3.639094e-48 |
| MsG0180002454.01 | MsG0780039978.01 | -0.830201 | 3.354864e-55 | 3.510807e-52 |
| MsG0180002809.01 | MsG0780039978.01 | -0.814048 | 1.878838e-51 | 1.247397e-48 |
| MsG0180002935.01 | MsG0780039978.01 | 0.807980 | 3.877164e-50 | 2.190260e-47 |
| MsG0180003114.01 | MsG0780039978.01 | -0.830796 | 2.399870e-55 | 2.555272e-52 |
| MsG0180003235.01 | MsG0780039978.01 | 0.850248 | 1.919409e-60 | 3.736636e-57 |
| MsG0180003248.01 | MsG0780039978.01 | 0.815417 | 9.344149e-52 | 6.438486e-49 |
| MsG0180003250.01 | MsG0780039978.01 | 0.811734 | 6.038321e-51 | 3.767090e-48 |
| MsG0180003338.01 | MsG0780039978.01 | 0.829169 | 5.981138e-55 | 6.073737e-52 |
| MsG0180003350.01 | MsG0780039978.01 | -0.840886 | 6.634469e-58 | 9.583118e-55 |
| MsG0180003351.01 | MsG0780039978.01 | -0.801308 | 9.572927e-49 | 4.556745e-46 |
| MsG0180003484.01 | MsG0780039978.01 | 0.803807 | 2.922357e-49 | 1.482534e-46 |
| MsG0180003604.01 | MsG0780039978.01 | 0.816067 | 6.692852e-52 | 4.694781e-49 |
| MsG0180003757.01 | MsG0780039978.01 | -0.834112 | 3.617312e-56 | 4.250970e-53 |
| MsG0180003758.01 | MsG0780039978.01 | -0.801685 | 8.013462e-49 | 3.850750e-46 |
| MsG0180003830.01 | MsG0780039978.01 | 0.822548 | 2.233761e-53 | 1.875649e-50 |
| MsG0180003993.01 | MsG0780039978.01 | 0.800030 | 1.744731e-48 | 8.040216e-46 |
| MsG0180004154.01 | MsG0780039978.01 | 0.809639 | 1.713445e-50 | 1.011472e-47 |
| MsG0180004193.01 | MsG0780039978.01 | -0.800528 | 1.381435e-48 | 6.446965e-46 |
| MsG0180004203.01 | MsG0780039978.01 | 0.832759 | 7.868712e-56 | 8.879620e-53 |
| MsG0180004266.01 | MsG0780039978.01 | 0.846806 | 1.723070e-59 | 3.001326e-56 |
| MsG0180004322.01 | MsG0780039978.01 | -0.820669 | 6.069299e-53 | 4.832874e-50 |
| MsG0180004328.01 | MsG0780039978.01 | 0.832736 | 7.974271e-56 | 8.992411e-53 |
| MsG0180004453.01 | MsG0780039978.01 | 0.817253 | 3.629217e-52 | 2.629562e-49 |
| MsG0180004502.01 | MsG0780039978.01 | -0.858949 | 5.798681e-63 | 1.505861e-59 |
| MsG0180004553.01 | MsG0780039978.01 | -0.822227 | 2.651703e-53 | 2.206140e-50 |
| MsG0180004562.01 | MsG0780039978.01 | 0.821603 | 3.697805e-53 | 3.022248e-50 |
| MsG0180004580.01 | MsG0780039978.01 | -0.819283 | 1.259809e-52 | 9.652290e-50 |
| MsG0180004581.01 | MsG0780039978.01 | -0.831757 | 1.392519e-55 | 1.525698e-52 |
| MsG0180004658.01 | MsG0780039978.01 | 0.816295 | 5.952936e-52 | 4.201941e-49 |
| MsG0180004757.01 | MsG0780039978.01 | 0.814613 | 1.408851e-51 | 9.498229e-49 |
| MsG0180004773.01 | MsG0780039978.01 | -0.873290 | 1.649232e-67 | 7.118731e-64 |
| MsG0180004941.01 | MsG0780039978.01 | 0.863166 | 3.021049e-64 | 9.072002e-61 |
| MsG0180004942.01 | MsG0780039978.01 | 0.887925 | 9.295050e-73 | 7.050207e-69 |
| MsG0180004957.01 | MsG0780039978.01 | -0.822553 | 2.227825e-53 | 1.870960e-50 |
| MsG0180005272.01 | MsG0780039978.01 | 0.811235 | 7.749081e-51 | 4.771061e-48 |
| MsG0180005328.01 | MsG0780039978.01 | 0.875034 | 4.232559e-68 | 1.947947e-64 |
| MsG0180005356.01 | MsG0780039978.01 | 0.891758 | 2.964690e-74 | 2.633442e-70 |
| MsG0180005357.01 | MsG0780039978.01 | 0.870863 | 1.058024e-66 | 4.179869e-63 |
| MsG0180005358.01 | MsG0780039978.01 | 0.881190 | 2.948208e-70 | 1.710685e-66 |
| MsG0180005417.01 | MsG0780039978.01 | 0.806177 | 9.334105e-50 | 5.032960e-47 |
| MsG0180005471.01 | MsG0780039978.01 | 0.800933 | 1.142435e-48 | 5.386849e-46 |
| MsG0180005474.01 | MsG0780039978.01 | -0.805530 | 1.276691e-49 | 6.770210e-47 |
| MsG0180005542.01 | MsG0780039978.01 | 0.848284 | 6.759207e-60 | 1.234308e-56 |
| MsG0180005571.01 | MsG0780039978.01 | 0.803734 | 3.026236e-49 | 1.532383e-46 |
| MsG0180005632.01 | MsG0780039978.01 | 0.802601 | 5.192991e-49 | 2.554360e-46 |
| MsG0180005648.01 | MsG0780039978.01 | 0.878880 | 1.962750e-69 | 1.041681e-65 |
| MsG0180005833.01 | MsG0780039978.01 | -0.809977 | 1.449255e-50 | 8.631136e-48 |
| MsG0180006212.01 | MsG0780039978.01 | -0.810939 | 8.980244e-51 | 5.486605e-48 |
| MsG0180006227.01 | MsG0780039978.01 | -0.820318 | 7.307446e-53 | 5.762705e-50 |
| MsG0280006381.01 | MsG0780039978.01 | -0.835624 | 1.505398e-56 | 1.851064e-53 |
| MsG0280006442.01 | MsG0780039978.01 | 0.826605 | 2.475382e-54 | 2.332396e-51 |
| MsG0280006452.01 | MsG0780039978.01 | -0.807491 | 4.925889e-50 | 2.747480e-47 |
| MsG0280010629.01 | MsG0780039978.01 | 0.834043 | 3.765810e-56 | 4.416241e-53 |
| MsG0280010802.01 | MsG0780039978.01 | 0.867477 | 1.329844e-65 | 4.649366e-62 |
| MsG0280011042.01 | MsG0780039978.01 | 0.804322 | 2.284128e-49 | 1.174180e-46 |
| MsG0280011165.01 | MsG0780039978.01 | 0.891423 | 4.027248e-74 | 3.529137e-70 |
| MsG0280011193.01 | MsG0780039978.01 | 0.877490 | 6.028147e-69 | 3.037024e-65 |
| MsG0280011203.01 | MsG0780039978.01 | 0.882106 | 1.375111e-70 | 8.269318e-67 |
| MsG0280011238.01 | MsG0780039978.01 | 0.838806 | 2.310102e-57 | 3.129033e-54 |
| MsG0280011264.01 | MsG0780039978.01 | 0.837463 | 5.120776e-57 | 6.657165e-54 |
| MsG0280011267.01 | MsG0780039978.01 | 0.835396 | 1.719114e-56 | 2.099734e-53 |
| MsG0280011281.01 | MsG0780039978.01 | -0.827123 | 1.861731e-54 | 1.780786e-51 |
| MsG0280011301.01 | MsG0780039978.01 | -0.803841 | 2.875122e-49 | 1.459926e-46 |
| MsG0280011449.01 | MsG0780039978.01 | -0.802697 | 4.961359e-49 | 2.446440e-46 |
| MsG0380011613.01 | MsG0780039978.01 | 0.847556 | 1.073409e-59 | 1.915219e-56 |
| MsG0380011635.01 | MsG0780039978.01 | 0.827419 | 1.580592e-54 | 1.525196e-51 |
| MsG0380011974.01 | MsG0780039978.01 | 0.829669 | 4.523301e-55 | 4.660997e-52 |
| MsG0380012148.01 | MsG0780039978.01 | -0.809146 | 2.185845e-50 | 1.273439e-47 |
| MsG0380012281.01 | MsG0780039978.01 | -0.811293 | 7.525553e-51 | 4.640371e-48 |
| MsG0380012400.01 | MsG0780039978.01 | 0.826295 | 2.933742e-54 | 2.740121e-51 |
| MsG0380012654.01 | MsG0780039978.01 | 0.847895 | 8.654308e-60 | 1.560809e-56 |
| MsG0380013114.01 | MsG0780039978.01 | -0.829965 | 3.831002e-55 | 3.981491e-52 |
| MsG0380013272.01 | MsG0780039978.01 | 0.876216 | 1.665491e-68 | 8.008136e-65 |
| MsG0380013285.01 | MsG0780039978.01 | 0.818005 | 2.456213e-52 | 1.816766e-49 |
| MsG0380013300.01 | MsG0780039978.01 | 0.884208 | 2.332435e-71 | 1.525547e-67 |
| MsG0380013449.01 | MsG0780039978.01 | 0.813600 | 2.357568e-51 | 1.546427e-48 |
| MsG0380013452.01 | MsG0780039978.01 | 0.823385 | 1.424931e-53 | 1.224964e-50 |
| MsG0380014410.01 | MsG0780039978.01 | 0.807587 | 4.700138e-50 | 2.627881e-47 |
| MsG0380014639.01 | MsG0780039978.01 | -0.831713 | 1.428114e-55 | 1.562672e-52 |
| MsG0380014642.01 | MsG0780039978.01 | -0.829479 | 5.030824e-55 | 5.154980e-52 |
| MsG0380014735.01 | MsG0780039978.01 | -0.806287 | 8.850701e-50 | 4.785524e-47 |
| MsG0380014802.01 | MsG0780039978.01 | 0.857666 | 1.397622e-62 | 3.476133e-59 |
| MsG0680030875.01 | MsG0780039978.01 | -0.807714 | 4.417070e-50 | 2.477970e-47 |
| MsG0680030878.01 | MsG0780039978.01 | -0.821093 | 4.849384e-53 | 3.907749e-50 |
| MsG0680030960.01 | MsG0780039978.01 | 0.877101 | 8.230430e-69 | 4.088348e-65 |
| MsG0680030961.01 | MsG0780039978.01 | 0.832736 | 7.971893e-56 | 8.989849e-53 |
| MsG0680031009.01 | MsG0780039978.01 | 0.816359 | 5.760078e-52 | 4.072754e-49 |
| MsG0680031240.01 | MsG0780039978.01 | 0.859022 | 5.511434e-63 | 1.434784e-59 |
| MsG0680031804.01 | MsG0780039978.01 | 0.812686 | 3.742402e-51 | 2.395120e-48 |
| MsG0680031813.01 | MsG0780039978.01 | -0.813798 | 2.132490e-51 | 1.406273e-48 |
| MsG0680033754.01 | MsG0780039978.01 | 0.801526 | 8.637501e-49 | 4.134142e-46 |
| MsG0680034229.01 | MsG0780039978.01 | -0.811539 | 6.657629e-51 | 4.132105e-48 |
| MsG0680034255.01 | MsG0780039978.01 | 0.819971 | 8.773824e-53 | 6.853331e-50 |
| MsG0680034316.01 | MsG0780039978.01 | 0.842956 | 1.883520e-58 | 2.902248e-55 |
| MsG0680034317.01 | MsG0780039978.01 | 0.865349 | 6.299584e-65 | 2.042889e-61 |
| MsG0680035368.01 | MsG0780039978.01 | -0.812658 | 3.794425e-51 | 2.426601e-48 |
| MsG0680035584.01 | MsG0780039978.01 | -0.817028 | 4.077186e-52 | 2.936177e-49 |
| MsG0480018463.01 | MsG0780039978.01 | -0.800730 | 1.256377e-48 | 5.893553e-46 |
| MsG0480018494.01 | MsG0780039978.01 | -0.811786 | 5.881314e-51 | 3.674183e-48 |
| MsG0480018628.01 | MsG0780039978.01 | -0.823922 | 1.067189e-53 | 9.315618e-51 |
| MsG0480019017.01 | MsG0780039978.01 | 0.837504 | 4.998515e-57 | 6.506757e-54 |
| MsG0480019046.01 | MsG0780039978.01 | -0.815424 | 9.309321e-52 | 6.415971e-49 |
| MsG0480019217.01 | MsG0780039978.01 | 0.848611 | 5.488244e-60 | 1.012777e-56 |
| MsG0480019228.01 | MsG0780039978.01 | 0.859071 | 5.330436e-63 | 1.389895e-59 |
| MsG0480019295.01 | MsG0780039978.01 | 0.822508 | 2.281805e-53 | 1.913730e-50 |
| MsG0480019304.01 | MsG0780039978.01 | 0.815816 | 7.616552e-52 | 5.305817e-49 |
| MsG0480019349.01 | MsG0780039978.01 | -0.809490 | 1.844050e-50 | 1.084180e-47 |
| MsG0480019376.01 | MsG0780039978.01 | -0.803618 | 3.198543e-49 | 1.614808e-46 |
| MsG0480019643.01 | MsG0780039978.01 | 0.817779 | 2.762162e-52 | 2.030514e-49 |
| MsG0480019726.01 | MsG0780039978.01 | 0.822638 | 2.128002e-53 | 1.791463e-50 |
| MsG0480019861.01 | MsG0780039978.01 | -0.823501 | 1.338592e-53 | 1.154689e-50 |
| MsG0480020269.01 | MsG0780039978.01 | -0.808577 | 2.892680e-50 | 1.659958e-47 |
| MsG0480020411.01 | MsG0780039978.01 | 0.818325 | 2.078693e-52 | 1.551139e-49 |
| MsG0480020497.01 | MsG0780039978.01 | 0.857020 | 2.168801e-62 | 5.277607e-59 |
| MsG0480020784.01 | MsG0780039978.01 | 0.832059 | 1.173399e-55 | 1.296940e-52 |
| MsG0480020958.01 | MsG0780039978.01 | 0.801649 | 8.150823e-49 | 3.913200e-46 |
| MsG0480021005.01 | MsG0780039978.01 | 0.817007 | 4.123102e-52 | 2.967517e-49 |
| MsG0480021039.01 | MsG0780039978.01 | -0.820881 | 5.427039e-53 | 4.347414e-50 |
| MsG0480021131.01 | MsG0780039978.01 | 0.801319 | 9.525768e-49 | 4.535498e-46 |
| MsG0480021143.01 | MsG0780039978.01 | -0.805305 | 1.423371e-49 | 7.504562e-47 |
| MsG0480021169.01 | MsG0780039978.01 | -0.811181 | 7.959112e-51 | 4.893501e-48 |
| MsG0480021327.01 | MsG0780039978.01 | -0.834781 | 2.457788e-56 | 2.946438e-53 |
| MsG0480021331.01 | MsG0780039978.01 | -0.823025 | 1.729302e-53 | 1.471850e-50 |
| MsG0480022125.01 | MsG0780039978.01 | 0.829462 | 5.078176e-55 | 5.201048e-52 |
| MsG0480022201.01 | MsG0780039978.01 | -0.810363 | 1.196533e-50 | 7.198181e-48 |
| MsG0480022308.01 | MsG0780039978.01 | 0.809126 | 2.207712e-50 | 1.285498e-47 |
| MsG0480022309.01 | MsG0780039978.01 | 0.805147 | 1.535855e-49 | 8.065140e-47 |
| MsG0480022310.01 | MsG0780039978.01 | 0.821410 | 4.097026e-53 | 3.330584e-50 |
| MsG0480022311.01 | MsG0780039978.01 | 0.829401 | 5.255890e-55 | 5.373687e-52 |
| MsG0480022383.01 | MsG0780039978.01 | 0.807099 | 5.963646e-50 | 3.292335e-47 |
| MsG0480022400.01 | MsG0780039978.01 | 0.811241 | 7.725781e-51 | 4.757439e-48 |
| MsG0480022543.01 | MsG0780039978.01 | 0.804064 | 2.584050e-49 | 1.319681e-46 |
| MsG0480022610.01 | MsG0780039978.01 | 0.806533 | 7.856484e-50 | 4.274611e-47 |
| MsG0480022626.01 | MsG0780039978.01 | -0.802272 | 6.070520e-49 | 2.961104e-46 |
| MsG0480022638.01 | MsG0780039978.01 | 0.814012 | 1.913650e-51 | 1.269293e-48 |
| MsG0480022655.01 | MsG0780039978.01 | 0.865032 | 7.922977e-65 | 2.541323e-61 |
| MsG0480022687.01 | MsG0780039978.01 | -0.823592 | 1.275183e-53 | 1.102754e-50 |
| MsG0480022721.01 | MsG0780039978.01 | 0.816757 | 4.689947e-52 | 3.352433e-49 |
| MsG0480022935.01 | MsG0780039978.01 | -0.828641 | 8.030697e-55 | 8.029415e-52 |
| MsG0480023006.01 | MsG0780039978.01 | -0.805409 | 1.353869e-49 | 7.157324e-47 |
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| MsG0780038963.01 | MsG0780039978.01 | 0.804474 | 2.122787e-49 | 1.095517e-46 |
| MsG0780039190.01 | MsG0780039978.01 | 0.840166 | 1.024258e-57 | 1.446887e-54 |
| MsG0780039287.01 | MsG0780039978.01 | -0.823032 | 1.723251e-53 | 1.466944e-50 |
| MsG0780039431.01 | MsG0780039978.01 | 0.812261 | 4.633990e-51 | 2.932497e-48 |
| MsG0780039576.01 | MsG0780039978.01 | 0.860019 | 2.765440e-63 | 7.451623e-60 |
| MsG0780039619.01 | MsG0780039978.01 | 0.802908 | 4.488229e-49 | 2.225064e-46 |
| MsG0780039783.01 | MsG0780039978.01 | 0.820412 | 6.953889e-53 | 5.498621e-50 |
| MsG0780039836.01 | MsG0780039978.01 | -0.820671 | 6.063590e-53 | 4.828583e-50 |
| MsG0780039838.01 | MsG0780039978.01 | -0.815375 | 9.550015e-52 | 6.572748e-49 |
| MsG0780039839.01 | MsG0780039978.01 | -0.850476 | 1.657035e-60 | 3.249717e-57 |
| MsG0780039879.01 | MsG0780039978.01 | -0.801953 | 7.058801e-49 | 3.415215e-46 |
| MsG0780039968.01 | MsG0780039978.01 | 0.823651 | 1.235149e-53 | 1.070026e-50 |
| MsG0780039969.01 | MsG0780039978.01 | 0.816499 | 5.358428e-52 | 3.803064e-49 |
| MsG0780039978.01 | MsG0780040181.01 | 0.843498 | 1.350691e-58 | 2.117202e-55 |
| MsG0780039978.01 | MsG0780040321.01 | -0.822882 | 1.867247e-53 | 1.582735e-50 |
| MsG0780039978.01 | MsG0780040429.01 | -0.825141 | 5.509628e-54 | 4.980125e-51 |
| MsG0780039978.01 | MsG0780040613.01 | 0.825493 | 4.549870e-54 | 4.153532e-51 |
| MsG0780039978.01 | MsG0780040685.01 | -0.810146 | 1.332411e-50 | 7.970212e-48 |
| MsG0780039978.01 | MsG0780040805.01 | 0.838333 | 3.060576e-57 | 4.085974e-54 |
| MsG0780039978.01 | MsG0780040806.01 | 0.865036 | 7.902438e-65 | 2.535070e-61 |
| MsG0780039978.01 | MsG0780040838.01 | -0.804176 | 2.449632e-49 | 1.254540e-46 |
| MsG0780039978.01 | MsG0780040892.01 | -0.804762 | 1.848520e-49 | 9.611480e-47 |
| MsG0780039978.01 | MsG0780041025.01 | 0.806220 | 9.143912e-50 | 4.935732e-47 |
| MsG0780039978.01 | MsG0780041079.01 | 0.828904 | 6.934604e-55 | 6.986342e-52 |
| MsG0780039978.01 | MsG0780041121.01 | -0.818689 | 1.719659e-52 | 1.296130e-49 |
| MsG0780039978.01 | MsG0780041198.01 | 0.831394 | 1.711841e-55 | 1.855223e-52 |
| MsG0780039978.01 | MsG0780041254.01 | -0.832322 | 1.010179e-55 | 1.125061e-52 |
| MsG0780039978.01 | MsG0780041316.01 | 0.896490 | 3.508981e-76 | 3.804568e-72 |
| MsG0780039978.01 | MsG0780041317.01 | 0.811858 | 5.672107e-51 | 3.550234e-48 |
| MsG0780039978.01 | MsG0780041556.01 | 0.892597 | 1.370687e-74 | 1.261635e-70 |
| MsG0780039978.01 | MsG0780041561.01 | -0.837529 | 4.926547e-57 | 6.417781e-54 |
| MsG0780039978.01 | MsG0780041574.01 | 0.841006 | 6.173125e-58 | 8.948526e-55 |
| MsG0780039978.01 | MsG0780041620.01 | -0.836189 | 1.082324e-56 | 1.354021e-53 |
| MsG0780039978.01 | MsG0780041663.01 | 0.863760 | 1.977050e-64 | 6.062812e-61 |
| MsG0780039978.01 | MsG0780041691.01 | -0.803542 | 3.317132e-49 | 1.671462e-46 |
| MsG0780039978.01 | MsG0780041720.01 | -0.809446 | 1.884419e-50 | 1.106631e-47 |
| MsG0780039978.01 | MsG0780041783.01 | -0.837917 | 3.915830e-57 | 5.162108e-54 |
| MsG0780039978.01 | MsG0880041835.01 | -0.848739 | 5.058694e-60 | 9.375149e-57 |
| MsG0780039978.01 | MsG0880041855.01 | -0.820848 | 5.522032e-53 | 4.419453e-50 |
| MsG0780039978.01 | MsG0880042291.01 | -0.800788 | 1.222620e-48 | 5.743467e-46 |
| MsG0780039978.01 | MsG0880042591.01 | 0.826722 | 2.320492e-54 | 2.193790e-51 |
| MsG0780039978.01 | MsG0880042740.01 | 0.865735 | 4.759277e-65 | 1.565071e-61 |
| MsG0780039978.01 | MsG0880042810.01 | 0.809319 | 2.006592e-50 | 1.174401e-47 |
| MsG0780039978.01 | MsG0880042858.01 | -0.817665 | 2.931821e-52 | 2.148413e-49 |
| MsG0780039978.01 | MsG0880042895.01 | -0.830617 | 2.655508e-55 | 2.812470e-52 |
| MsG0780039978.01 | MsG0880042921.01 | -0.802259 | 6.108482e-49 | 2.978592e-46 |
| MsG0780039978.01 | MsG0880043364.01 | 0.850624 | 1.505678e-60 | 2.967305e-57 |
| MsG0780039978.01 | MsG0880043472.01 | 0.812468 | 4.176537e-51 | 2.657792e-48 |
| MsG0780039978.01 | MsG0880043481.01 | 0.801287 | 9.670269e-49 | 4.600613e-46 |
| MsG0780039978.01 | MsG0880043744.01 | 0.841921 | 3.543427e-58 | 5.285558e-55 |
| MsG0780039978.01 | MsG0880043786.01 | 0.808997 | 2.352458e-50 | 1.364967e-47 |
| MsG0780039978.01 | MsG0880043828.01 | 0.890964 | 6.117369e-74 | 5.258988e-70 |
| MsG0780039978.01 | MsG0880043906.01 | 0.802638 | 5.102226e-49 | 2.512023e-46 |
| MsG0780039978.01 | MsG0880044339.01 | -0.822869 | 1.880545e-53 | 1.593461e-50 |
| MsG0780039978.01 | MsG0880044570.01 | 0.808841 | 2.540405e-50 | 1.467863e-47 |
| MsG0780039978.01 | MsG0880044968.01 | -0.805902 | 1.066694e-49 | 5.711110e-47 |
| MsG0780039978.01 | MsG0880045063.01 | -0.829915 | 3.939521e-55 | 4.088666e-52 |
| MsG0780039978.01 | MsG0880045272.01 | 0.844155 | 9.004275e-59 | 1.440878e-55 |
| MsG0780039978.01 | MsG0880045369.01 | -0.830379 | 3.035799e-55 | 3.193022e-52 |
| MsG0780039978.01 | MsG0880045385.01 | -0.832444 | 9.423056e-56 | 1.053404e-52 |
| MsG0780039978.01 | MsG0880045413.01 | -0.805189 | 1.505382e-49 | 7.913371e-47 |
| MsG0780039978.01 | MsG0880045441.01 | 0.827204 | 1.780223e-54 | 1.707049e-51 |
| MsG0780039978.01 | MsG0880045458.01 | 0.834786 | 2.451025e-56 | 2.938724e-53 |
| MsG0780039978.01 | MsG0880045677.01 | 0.880472 | 5.335744e-70 | 3.011003e-66 |
| MsG0780039978.01 | MsG0880045683.01 | 0.845649 | 3.560497e-59 | 5.974508e-56 |
| MsG0780039978.01 | MsG0880045968.01 | -0.805984 | 1.025225e-49 | 5.500819e-47 |
| MsG0780039978.01 | MsG0880046010.01 | -0.814317 | 1.638678e-51 | 1.095971e-48 |
| MsG0780039978.01 | MsG0880046095.01 | 0.808439 | 3.095076e-50 | 1.769827e-47 |
| MsG0780039978.01 | MsG0880046174.01 | -0.809763 | 1.611515e-50 | 9.544151e-48 |
| MsG0780039978.01 | MsG0880046176.01 | 0.858099 | 1.039571e-62 | 2.623209e-59 |
| MsG0780039978.01 | MsG0880046189.01 | -0.818092 | 2.347129e-52 | 1.740142e-49 |
| MsG0780039978.01 | MsG0880046219.01 | -0.813620 | 2.334211e-51 | 1.531904e-48 |
| MsG0780039978.01 | MsG0880046227.01 | 0.803012 | 4.271614e-49 | 2.123095e-46 |
| MsG0780039978.01 | MsG0880046308.01 | 0.848067 | 7.759571e-60 | 1.406809e-56 |
| MsG0780039978.01 | MsG0880046341.01 | -0.826514 | 2.602402e-54 | 2.445807e-51 |
| MsG0780039978.01 | MsG0880046360.01 | 0.831677 | 1.457880e-55 | 1.593394e-52 |
| MsG0780039978.01 | MsG0880046429.01 | 0.860110 | 2.595065e-63 | 7.015088e-60 |
| MsG0780039978.01 | MsG0880046469.01 | -0.833438 | 5.332066e-56 | 6.140854e-53 |
| MsG0780039978.01 | MsG0880046863.01 | 0.852962 | 3.270378e-61 | 6.953483e-58 |
| MsG0780039978.01 | MsG0880046876.01 | -0.809150 | 2.181077e-50 | 1.270805e-47 |
| MsG0780039978.01 | MsG0880046996.01 | 0.856366 | 3.378443e-62 | 8.044913e-59 |
| MsG0780039978.01 | MsG0880047318.01 | -0.811153 | 8.070922e-51 | 4.958533e-48 |
| MsG0780039978.01 | MsG0880047406.01 | -0.810982 | 8.790023e-51 | 5.376702e-48 |
| MsG0780039978.01 | MsG0880047486.01 | 0.846718 | 1.821387e-59 | 3.163768e-56 |
| MsG0780039978.01 | MsG0880047493.01 | 0.828071 | 1.102003e-54 | 1.083732e-51 |
| MsG0780039978.01 | MsG0880047500.01 | 0.800840 | 1.193345e-48 | 5.613649e-46 |
| MsG0780039978.01 | MsG0880047627.01 | -0.842578 | 2.373541e-58 | 3.614683e-55 |
| MsG0780039978.01 | MsG0880047665.01 | 0.838421 | 2.905708e-57 | 3.889846e-54 |
| MsG0780039978.01 | MsG0880047714.01 | 0.808378 | 3.189925e-50 | 1.821117e-47 |
| MsG0780039978.01 | MsG0880047747.01 | 0.810842 | 9.425209e-51 | 5.743216e-48 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780039978.01.T01 | MTR_7g082760 | 97.500 | 120 | 3 | 0 | 1 | 120 | 7 | 126 | 3.25e-83 | 239 |
| MsG0780039978.01.T01 | MTR_7g082750 | 50.376 | 133 | 47 | 5 | 1 | 120 | 3 | 129 | 5.84e-35 | 117 |
| MsG0780039978.01.T01 | MTR_7g082740 | 52.756 | 127 | 45 | 4 | 9 | 120 | 4 | 130 | 6.42e-34 | 114 |
| MsG0780039978.01.T01 | MTR_7g082700 | 52.756 | 127 | 45 | 4 | 9 | 120 | 4 | 130 | 1.39e-33 | 114 |
| MsG0780039978.01.T01 | MTR_7g082730 | 55.200 | 125 | 41 | 5 | 10 | 120 | 5 | 128 | 5.44e-33 | 112 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 34 sgRNAs with CRISPR-Local
Find 35 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGCTTTGTCCACATCTTTAT+TGG | 0.171024 | 7:-71383402 | None:intergenic |
| CCGTAAGTACCTCGTTGGTT+TGG | 0.301020 | 7:-71383250 | None:intergenic |
| ACTTATATTTGAGATTTCTA+AGG | 0.310038 | 7:+71383539 | MsG0780039978.01.T01:CDS |
| AGAAGGATTAAACTATTTCA+TGG | 0.325765 | 7:-71383589 | None:intergenic |
| CAAGGTTAACATGGGCTATT+AGG | 0.336227 | 7:+71383376 | MsG0780039978.01.T01:CDS |
| ATGAAAAGTGATACCATCTT+TGG | 0.337936 | 7:+71383459 | MsG0780039978.01.T01:CDS |
| CGTAAGTACCTCGTTGGTTT+GGG | 0.339937 | 7:-71383249 | None:intergenic |
| TAAGGATCGTGTAGTTTCTA+AGG | 0.360505 | 7:+71383485 | MsG0780039978.01.T01:CDS |
| ATTTGAGATTTCTAAGGCCT+TGG | 0.387808 | 7:+71383545 | MsG0780039978.01.T01:CDS |
| GAAGGAAGACCAAGGTTCTA+AGG | 0.400859 | 7:+71383319 | MsG0780039978.01.T01:CDS |
| TGATACCATCTTTGGAACTA+AGG | 0.464934 | 7:+71383467 | MsG0780039978.01.T01:CDS |
| TCTTCTCAACCTTAGAACCT+TGG | 0.471764 | 7:-71383328 | None:intergenic |
| AGGTTCTAAGGTTGAGAAGA+AGG | 0.473602 | 7:+71383331 | MsG0780039978.01.T01:CDS |
| CCAAACCAACGAGGTACTTA+CGG | 0.478482 | 7:+71383250 | MsG0780039978.01.T01:CDS |
| CTTCCTTCCATCACCGGTGA+TGG | 0.490534 | 7:-71383304 | None:intergenic |
| CGCCTCCGTAAGTACCTCGT+TGG | 0.498443 | 7:-71383255 | None:intergenic |
| CTTGGTCTTCCTTCCATCAC+CGG | 0.498548 | 7:-71383310 | None:intergenic |
| GAGTAGTTCCAAGGTTAACA+TGG | 0.518857 | 7:+71383367 | MsG0780039978.01.T01:CDS |
| GAGGATGCCATCACCGGTGA+TGG | 0.521516 | 7:+71383297 | MsG0780039978.01.T01:CDS |
| CTAATAGCCCATGTTAACCT+TGG | 0.534159 | 7:-71383375 | None:intergenic |
| CTCGACGAGGATGCCATCAC+CGG | 0.557338 | 7:+71383291 | MsG0780039978.01.T01:CDS |
| TAAGGTTGAGAAGAAGGCAG+TGG | 0.557373 | 7:+71383337 | MsG0780039978.01.T01:CDS |
| ACGATCCTTAGTTCCAAAGA+TGG | 0.563624 | 7:-71383472 | None:intergenic |
| ATGCCATCACCGGTGATGGA+AGG | 0.564522 | 7:+71383301 | MsG0780039978.01.T01:CDS |
| GGTTGAGAAGAAGGCAGTGG+AGG | 0.585451 | 7:+71383340 | MsG0780039978.01.T01:CDS |
| GGAGGATAAGAGTAGTTCCA+AGG | 0.595694 | 7:+71383358 | MsG0780039978.01.T01:CDS |
| CAACGAGGTACTTACGGAGG+CGG | 0.621368 | 7:+71383256 | MsG0780039978.01.T01:CDS |
| AGTAGTTCCAAGGTTAACAT+GGG | 0.641526 | 7:+71383368 | MsG0780039978.01.T01:CDS |
| TAATTCATGAGAAGCAACCA+AGG | 0.645785 | 7:-71383562 | None:intergenic |
| TTAGGTCACCAATAAAGATG+TGG | 0.652661 | 7:+71383394 | MsG0780039978.01.T01:CDS |
| GCGATATCAGCGACTCGACG+AGG | 0.678608 | 7:+71383278 | MsG0780039978.01.T01:CDS |
| CGGTGATGGAAGGAAGACCA+AGG | 0.711559 | 7:+71383311 | MsG0780039978.01.T01:CDS |
| AACCAACGAGGTACTTACGG+AGG | 0.715584 | 7:+71383253 | MsG0780039978.01.T01:CDS |
| CACTGATACCCAAACCAACG+AGG | 0.721556 | 7:+71383241 | MsG0780039978.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ACTTATATTTGAGATTTCTA+AGG | + | Chr7:71383539-71383558 | MsG0780039978.01.T01:CDS | 20.0% |
| ATGAAAAGTGATACCATCTT+TGG | + | Chr7:71383459-71383478 | MsG0780039978.01.T01:CDS | 30.0% | |
| !! | AAAGATGGTATCACTTTTCA+TGG | - | Chr7:71383460-71383479 | None:intergenic | 30.0% |
| AGTAGTTCCAAGGTTAACAT+GGG | + | Chr7:71383368-71383387 | MsG0780039978.01.T01:CDS | 35.0% | |
| TAAGGATCGTGTAGTTTCTA+AGG | + | Chr7:71383485-71383504 | MsG0780039978.01.T01:CDS | 35.0% | |
| TAATTCATGAGAAGCAACCA+AGG | - | Chr7:71383565-71383584 | None:intergenic | 35.0% | |
| TTAGGTCACCAATAAAGATG+TGG | + | Chr7:71383394-71383413 | MsG0780039978.01.T01:CDS | 35.0% | |
| ! | AGCTTTGTCCACATCTTTAT+TGG | - | Chr7:71383405-71383424 | None:intergenic | 35.0% |
| ! | TTATTCTCGTGATGCTTTTG+AGG | + | Chr7:71383512-71383531 | MsG0780039978.01.T01:CDS | 35.0% |
| !! | ATTTGAGATTTCTAAGGCCT+TGG | + | Chr7:71383545-71383564 | MsG0780039978.01.T01:CDS | 35.0% |
| !! | TGATACCATCTTTGGAACTA+AGG | + | Chr7:71383467-71383486 | MsG0780039978.01.T01:CDS | 35.0% |
| ACGATCCTTAGTTCCAAAGA+TGG | - | Chr7:71383475-71383494 | None:intergenic | 40.0% | |
| CTAATAGCCCATGTTAACCT+TGG | - | Chr7:71383378-71383397 | None:intergenic | 40.0% | |
| GAGTAGTTCCAAGGTTAACA+TGG | + | Chr7:71383367-71383386 | MsG0780039978.01.T01:CDS | 40.0% | |
| TCTTCTCAACCTTAGAACCT+TGG | - | Chr7:71383331-71383350 | None:intergenic | 40.0% | |
| ! | CAAGGTTAACATGGGCTATT+AGG | + | Chr7:71383376-71383395 | MsG0780039978.01.T01:CDS | 40.0% |
| !! | AGGTTCTAAGGTTGAGAAGA+AGG | + | Chr7:71383331-71383350 | MsG0780039978.01.T01:CDS | 40.0% |
| GAAGGAAGACCAAGGTTCTA+AGG | + | Chr7:71383319-71383338 | MsG0780039978.01.T01:CDS | 45.0% | |
| GGAGGATAAGAGTAGTTCCA+AGG | + | Chr7:71383358-71383377 | MsG0780039978.01.T01:CDS | 45.0% | |
| TAAGGTTGAGAAGAAGGCAG+TGG | + | Chr7:71383337-71383356 | MsG0780039978.01.T01:CDS | 45.0% | |
| ! | CCAAACCAACGAGGTACTTA+CGG | + | Chr7:71383250-71383269 | MsG0780039978.01.T01:CDS | 45.0% |
| !! | CGTAAGTACCTCGTTGGTTT+GGG | - | Chr7:71383252-71383271 | None:intergenic | 45.0% |
| CACTGATACCCAAACCAACG+AGG | + | Chr7:71383241-71383260 | MsG0780039978.01.T01:CDS | 50.0% | |
| ! | AACCAACGAGGTACTTACGG+AGG | + | Chr7:71383253-71383272 | MsG0780039978.01.T01:CDS | 50.0% |
| ! | CCGTAAGTACCTCGTTGGTT+TGG | - | Chr7:71383253-71383272 | None:intergenic | 50.0% |
| ! | CTTGGTCTTCCTTCCATCAC+CGG | - | Chr7:71383313-71383332 | None:intergenic | 50.0% |
| CTTCCTTCCATCACCGGTGA+TGG | - | Chr7:71383307-71383326 | None:intergenic | 55.0% | |
| GGTTGAGAAGAAGGCAGTGG+AGG | + | Chr7:71383340-71383359 | MsG0780039978.01.T01:CDS | 55.0% | |
| ! | CAACGAGGTACTTACGGAGG+CGG | + | Chr7:71383256-71383275 | MsG0780039978.01.T01:CDS | 55.0% |
| !! | ATGCCATCACCGGTGATGGA+AGG | + | Chr7:71383301-71383320 | MsG0780039978.01.T01:CDS | 55.0% |
| !! | CGGTGATGGAAGGAAGACCA+AGG | + | Chr7:71383311-71383330 | MsG0780039978.01.T01:CDS | 55.0% |
| CGCCTCCGTAAGTACCTCGT+TGG | - | Chr7:71383258-71383277 | None:intergenic | 60.0% | |
| CTCGACGAGGATGCCATCAC+CGG | + | Chr7:71383291-71383310 | MsG0780039978.01.T01:CDS | 60.0% | |
| GAGGATGCCATCACCGGTGA+TGG | + | Chr7:71383297-71383316 | MsG0780039978.01.T01:CDS | 60.0% | |
| GCGATATCAGCGACTCGACG+AGG | + | Chr7:71383278-71383297 | MsG0780039978.01.T01:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr7 | gene | 71383234 | 71383599 | 71383234 | ID=MsG0780039978.01;Name=MsG0780039978.01 |
| Chr7 | mRNA | 71383234 | 71383599 | 71383234 | ID=MsG0780039978.01.T01;Parent=MsG0780039978.01;Name=MsG0780039978.01.T01;_AED=0.50;_eAED=0.50;_QI=0|-1|0|1|-1|1|1|0|121 |
| Chr7 | exon | 71383234 | 71383599 | 71383234 | ID=MsG0780039978.01.T01:exon:11769;Parent=MsG0780039978.01.T01 |
| Chr7 | CDS | 71383234 | 71383599 | 71383234 | ID=MsG0780039978.01.T01:cds;Parent=MsG0780039978.01.T01 |
| Gene Sequence |
| Protein sequence |
