AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880047665.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880047665.01.T01 MTR_4g132430 93.053 475 26 6 7 476 1 473 0.0 826
MsG0880047665.01.T01 MTR_4g132430 97.361 341 9 0 138 478 1 341 0.0 688
MsG0880047665.01.T01 MTR_2g023930 54.808 520 161 21 1 476 43 532 1.03e-139 413
MsG0880047665.01.T01 MTR_2g088000 51.534 489 184 15 34 478 81 560 8.15e-129 387
MsG0880047665.01.T01 MTR_3g053330 41.538 455 207 11 34 473 34 444 4.49e-101 311
MsG0880047665.01.T01 MTR_6g038890 93.846 130 8 0 165 294 89 218 1.94e-86 265
MsG0880047665.01.T01 MTR_4g049790 38.831 479 233 11 39 478 60 517 1.72e-85 273
MsG0880047665.01.T01 MTR_4g049760 42.923 431 201 8 89 478 79 505 8.07e-82 263
MsG0880047665.01.T01 MTR_7g110720 40.351 456 180 15 41 474 17 402 1.87e-81 259
MsG0880047665.01.T01 MTR_4g047580 38.386 508 229 15 21 474 15 492 3.36e-80 259
MsG0880047665.01.T01 MTR_7g110720 39.207 454 161 14 41 474 17 375 1.02e-74 241
MsG0880047665.01.T01 MTR_5g044695 97.196 107 3 0 188 294 1 107 2.01e-72 224
MsG0880047665.01.T01 MTR_5g044695 94.737 95 5 0 169 263 8 102 3.54e-58 187
MsG0880047665.01.T01 MTR_2g045360 33.791 364 210 8 117 472 68 408 1.02e-52 184
MsG0880047665.01.T01 MTR_7g009730 31.158 475 197 16 108 474 31 483 5.20e-48 174
MsG0880047665.01.T01 MTR_4g107970 37.209 344 164 8 94 385 46 389 2.31e-43 162
MsG0880047665.01.T01 MTR_4g094412 84.416 77 12 0 248 324 218 294 4.34e-42 156
MsG0880047665.01.T01 MTR_4g094412 42.570 249 118 7 248 473 227 473 4.64e-42 156
MsG0880047665.01.T01 MTR_4g107970 38.462 312 141 7 125 385 1 312 5.10e-42 157
MsG0880047665.01.T01 MTR_4g007060 33.190 232 97 8 239 470 103 276 8.41e-29 115
MsG0880047665.01.T01 MTR_4g007060 33.190 232 97 8 239 470 137 310 1.14e-28 115
MsG0880047665.01.T01 MTR_2g105060 27.778 360 157 13 113 470 51 309 1.99e-27 112
MsG0880047665.01.T01 MTR_1g013760 33.051 236 128 7 104 338 8 214 6.92e-27 110
MsG0880047665.01.T01 MTR_1g013790 32.599 227 95 6 116 340 7 177 2.97e-26 107
MsG0880047665.01.T01 MTR_3g106060 27.419 372 165 9 106 473 15 285 1.95e-25 106
MsG0880047665.01.T01 MTR_3g056100 40.268 149 74 4 247 381 254 401 1.30e-24 106
MsG0880047665.01.T01 MTR_3g056100 49.180 61 29 2 264 324 99 157 1.34e-11 67.0
MsG0880047665.01.T01 MTR_3g056100 40.268 149 74 4 247 381 241 388 1.46e-24 106
MsG0880047665.01.T01 MTR_3g056100 49.180 61 29 2 264 324 99 157 1.36e-11 66.6
MsG0880047665.01.T01 MTR_3g009470 48.039 102 52 1 225 326 456 556 2.05e-24 107
MsG0880047665.01.T01 MTR_3g009470 43.678 87 47 2 239 325 255 339 1.39e-14 76.6
MsG0880047665.01.T01 MTR_5g094430 50.526 95 45 2 247 341 235 327 2.52e-24 105
MsG0880047665.01.T01 MTR_5g094430 50.820 61 28 2 264 324 88 146 1.84e-12 69.3
MsG0880047665.01.T01 MTR_5g094430 50.526 95 45 2 247 341 213 305 2.67e-24 105
MsG0880047665.01.T01 MTR_5g094430 50.820 61 28 2 264 324 66 124 2.28e-12 68.9
MsG0880047665.01.T01 MTR_3g056100 43.182 132 60 4 247 364 398 528 4.48e-24 105
MsG0880047665.01.T01 MTR_3g056100 49.180 61 29 2 264 324 243 301 1.29e-11 67.4
MsG0880047665.01.T01 MTR_3g056100 43.182 132 60 4 247 364 385 515 5.02e-24 105
MsG0880047665.01.T01 MTR_3g056100 49.180 61 29 2 264 324 243 301 1.38e-11 67.0
MsG0880047665.01.T01 MTR_3g031220 54.430 79 35 1 246 324 347 424 6.04e-24 105
MsG0880047665.01.T01 MTR_3g031220 38.298 94 52 3 233 326 171 258 4.97e-13 71.6
MsG0880047665.01.T01 MTR_5g094430 55.000 80 35 1 247 326 347 425 6.95e-24 105
MsG0880047665.01.T01 MTR_5g094430 50.820 61 28 2 264 324 200 258 3.19e-12 68.9
MsG0880047665.01.T01 MTR_7g071120 42.029 138 63 4 241 375 301 424 7.37e-24 104
MsG0880047665.01.T01 MTR_7g071120 50.000 60 28 2 265 324 167 224 1.61e-11 66.6
MsG0880047665.01.T01 MTR_3g104750 52.632 76 35 1 247 322 87 161 1.04e-23 97.8
MsG0880047665.01.T01 MTR_5g097490 44.643 112 59 3 231 341 218 327 3.95e-23 101
MsG0880047665.01.T01 MTR_5g074400 52.381 84 39 1 243 326 399 481 4.18e-23 102
MsG0880047665.01.T01 MTR_5g074400 43.590 78 42 2 264 341 243 318 3.61e-13 72.0
MsG0880047665.01.T01 MTR_4g013260 53.165 79 36 1 246 324 318 395 4.89e-23 102
MsG0880047665.01.T01 MTR_4g013260 41.333 75 41 2 250 324 172 243 1.88e-13 72.8
MsG0880047665.01.T01 MTR_2g033820 50.000 82 40 1 248 329 187 267 5.64e-23 100
MsG0880047665.01.T01 MTR_1g015140 52.703 74 34 1 249 322 87 159 6.20e-23 95.5
MsG0880047665.01.T01 MTR_7g011820 51.190 84 40 1 243 326 389 471 7.34e-23 102
MsG0880047665.01.T01 MTR_7g011820 52.459 61 27 2 264 324 228 286 8.60e-13 70.9
MsG0880047665.01.T01 MTR_7g109800 46.316 95 46 2 248 342 129 218 9.79e-23 98.6
MsG0880047665.01.T01 MTR_2g105060 32.468 231 83 10 246 470 71 234 1.66e-22 96.7
MsG0880047665.01.T01 MTR_7g028415 52.113 71 33 1 253 323 82 151 3.23e-22 94.0
MsG0880047665.01.T01 MTR_7g028710 52.113 71 33 1 253 323 82 151 3.23e-22 94.0
MsG0880047665.01.T01 MTR_5g042920 50.617 81 39 1 246 326 302 381 6.46e-22 98.2
MsG0880047665.01.T01 MTR_5g042920 37.615 109 64 3 264 372 151 255 7.70e-13 70.5
MsG0880047665.01.T01 MTR_7g080020 51.250 80 38 1 247 326 476 554 1.28e-21 99.0
MsG0880047665.01.T01 MTR_7g080020 48.333 60 29 2 265 324 281 338 6.20e-11 65.5
MsG0880047665.01.T01 MTR_7g080000 51.250 80 38 1 247 326 415 493 2.14e-21 98.2
MsG0880047665.01.T01 MTR_7g080000 46.154 65 33 2 260 324 230 292 5.52e-11 65.5
MsG0880047665.01.T01 MTR_4g082580 46.316 95 44 2 232 326 252 339 2.27e-21 96.3
MsG0880047665.01.T01 MTR_1g086790 51.948 77 36 1 248 324 142 217 3.21e-21 94.7
MsG0880047665.01.T01 MTR_7g079010 48.750 80 40 1 243 322 120 198 7.33e-21 91.3
MsG0880047665.01.T01 MTR_4g094588 44.554 101 49 2 251 345 165 264 1.57e-20 92.8
MsG0880047665.01.T01 MTR_4g122530 50.649 77 37 1 248 324 192 267 2.98e-20 93.2
MsG0880047665.01.T01 MTR_7g100510 41.489 94 54 1 231 324 328 420 5.19e-20 92.8
MsG0880047665.01.T01 MTR_7g100510 50.000 60 28 2 265 324 190 247 1.18e-11 67.0
MsG0880047665.01.T01 MTR_5g043880 47.561 82 42 1 240 321 100 180 6.78e-20 90.1
MsG0880047665.01.T01 MTR_8g092010 45.946 74 39 1 251 324 95 167 1.20e-19 87.0
MsG0880047665.01.T01 MTR_7g109600 52.703 74 32 1 264 337 53 123 2.87e-19 87.8
MsG0880047665.01.T01 MTR_4g130900 50.633 79 36 2 248 324 343 420 3.13e-19 90.9
MsG0880047665.01.T01 MTR_5g091390 50.000 74 36 1 251 324 144 216 1.48e-18 86.7
MsG0880047665.01.T01 MTR_8g096730 45.570 79 42 1 249 327 55 132 1.60e-18 82.8
MsG0880047665.01.T01 MTR_3g095080 48.000 75 38 1 247 321 151 224 2.00e-18 85.1
MsG0880047665.01.T01 MTR_3g095080 48.000 75 38 1 247 321 127 200 2.38e-18 84.3
MsG0880047665.01.T01 MTR_1g009613 48.649 74 38 0 248 321 246 319 2.48e-18 86.7
MsG0880047665.01.T01 MTR_8g007270 43.902 82 45 1 240 321 130 210 3.22e-18 84.0
MsG0880047665.01.T01 MTR_3g095040 47.297 74 38 1 251 324 105 177 5.35e-18 82.8
MsG0880047665.01.T01 MTR_5g016610 48.684 76 39 0 248 323 183 258 8.70e-18 83.6
MsG0880047665.01.T01 MTR_4g094908 48.101 79 41 0 248 326 250 328 8.87e-18 84.7
MsG0880047665.01.T01 MTR_8g087000 52.113 71 29 1 264 334 77 142 1.64e-17 82.4
MsG0880047665.01.T01 MTR_8g087000 52.113 71 29 1 264 334 76 141 1.72e-17 82.4
MsG0880047665.01.T01 MTR_8g028565 50.685 73 36 0 262 334 153 225 2.81e-17 83.2
MsG0880047665.01.T01 MTR_2g083870 39.623 106 50 2 233 324 35 140 2.85e-17 82.0
MsG0880047665.01.T01 MTR_8g092140 47.368 76 38 2 247 321 142 216 5.95e-17 80.5
MsG0880047665.01.T01 MTR_1g070455 52.459 61 29 0 265 325 294 354 8.46e-17 82.0
MsG0880047665.01.T01 MTR_2g016770 51.613 62 30 0 264 325 35 96 9.66e-17 79.3
MsG0880047665.01.T01 MTR_4g127040 47.297 74 39 0 248 321 229 302 1.08e-16 81.3
MsG0880047665.01.T01 MTR_2g016770 52.459 61 29 0 265 325 28 88 1.25e-16 79.0
MsG0880047665.01.T01 MTR_2g032030 48.571 70 36 0 265 334 268 337 1.73e-16 82.0
MsG0880047665.01.T01 MTR_2g024350 34.074 135 79 3 259 383 3 137 3.15e-16 78.2
MsG0880047665.01.T01 MTR_2g032030 48.571 70 36 0 265 334 268 337 3.24e-16 80.9
MsG0880047665.01.T01 MTR_1g077780 44.304 79 43 1 248 326 46 123 4.95e-16 75.5
MsG0880047665.01.T01 MTR_3g108960 45.946 74 40 0 248 321 298 371 7.04e-16 79.7
MsG0880047665.01.T01 MTR_7g079040 37.607 117 71 2 220 334 108 224 8.47e-16 79.0
MsG0880047665.01.T01 MTR_2g024380 46.970 66 35 0 259 324 246 311 2.28e-15 78.6
MsG0880047665.01.T01 MTR_0117s0040 54.386 57 26 0 265 321 75 131 3.17e-15 75.9
MsG0880047665.01.T01 MTR_3g009470 41.935 93 52 2 233 325 249 339 5.86e-15 77.4
MsG0880047665.01.T01 MTR_7g062220 38.318 107 50 2 237 328 82 187 1.31e-14 75.1
MsG0880047665.01.T01 MTR_8g098945 44.286 70 39 0 265 334 130 199 1.36e-14 74.3
MsG0880047665.01.T01 MTR_4g007060 42.857 63 36 0 239 301 137 199 1.66e-14 73.6
MsG0880047665.01.T01 MTR_6g086555 48.000 75 37 2 251 324 193 266 2.10e-14 75.5
MsG0880047665.01.T01 MTR_1g099600 43.421 76 43 0 265 340 186 261 2.92e-14 73.9
MsG0880047665.01.T01 MTR_1g078260 43.056 72 39 2 251 321 234 304 1.77e-13 72.8
MsG0880047665.01.T01 MTR_3g031220 38.298 94 52 3 233 326 171 258 2.30e-13 72.0
MsG0880047665.01.T01 MTR_3g090860 53.333 60 26 1 263 320 132 191 7.75e-13 70.1
MsG0880047665.01.T01 MTR_5g067680 42.529 87 38 2 265 339 203 289 2.08e-12 68.9
MsG0880047665.01.T01 MTR_8g027860 47.826 69 34 1 263 329 135 203 2.87e-12 68.2
MsG0880047665.01.T01 MTR_8g069935 30.435 115 65 3 223 324 279 391 4.73e-12 68.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880047665.01.T01 AT1G62300 50.688 509 186 17 10 473 50 538 2.31e-125 376
MsG0880047665.01.T01 AT4G04450 47.773 494 189 15 34 473 25 503 3.59e-124 372
MsG0880047665.01.T01 AT4G22070 47.692 520 174 14 33 479 26 520 4.99e-113 344
MsG0880047665.01.T01 AT4G22070 47.692 520 174 14 33 479 26 520 4.99e-113 344
MsG0880047665.01.T01 AT4G22070 47.692 520 174 14 33 479 26 520 4.99e-113 344
MsG0880047665.01.T01 AT4G22070 47.692 520 174 14 33 479 26 520 4.99e-113 344
MsG0880047665.01.T01 AT4G04450 49.761 418 158 13 99 473 1 409 4.30e-110 333
MsG0880047665.01.T01 AT4G01720 45.312 384 169 15 103 470 85 443 1.72e-66 222
MsG0880047665.01.T01 AT5G15130 44.043 277 118 5 236 480 157 428 2.01e-50 179
MsG0880047665.01.T01 AT5G15130 44.043 277 118 5 236 480 199 470 2.81e-50 180
MsG0880047665.01.T01 AT1G68150 42.194 237 110 6 120 345 96 316 5.85e-47 167
MsG0880047665.01.T01 AT1G18860 42.069 290 107 8 247 475 222 511 5.77e-44 162
MsG0880047665.01.T01 AT1G69810 36.364 308 155 10 114 387 22 322 3.70e-38 143
MsG0880047665.01.T01 AT1G69810 54.930 142 58 3 247 387 128 264 1.78e-36 137
MsG0880047665.01.T01 AT4G31800 35.270 241 125 5 111 342 36 254 2.40e-33 128
MsG0880047665.01.T01 AT1G80840 34.034 238 108 7 98 324 7 206 3.17e-31 122
MsG0880047665.01.T01 AT2G25000 32.870 216 103 4 113 328 37 210 5.66e-27 110
MsG0880047665.01.T01 AT2G25000 33.173 208 97 4 121 328 2 167 1.35e-26 107
MsG0880047665.01.T01 AT2G25000 33.173 208 97 4 121 328 2 167 1.35e-26 107
MsG0880047665.01.T01 AT2G25000 33.173 208 97 4 121 328 24 189 2.03e-26 107
MsG0880047665.01.T01 AT4G31800 55.000 80 36 0 263 342 110 189 3.17e-25 104
MsG0880047665.01.T01 AT2G38470 53.086 81 37 1 246 326 344 423 2.37e-24 106
MsG0880047665.01.T01 AT2G38470 46.575 73 36 3 252 324 173 242 6.94e-13 71.2
MsG0880047665.01.T01 AT4G26640 55.128 78 34 1 247 324 188 264 6.54e-24 103
MsG0880047665.01.T01 AT4G26640 38.095 84 50 2 241 324 12 93 4.16e-12 68.2
MsG0880047665.01.T01 AT4G26640 55.128 78 34 1 247 324 188 264 6.54e-24 103
MsG0880047665.01.T01 AT4G26640 38.095 84 50 2 241 324 12 93 4.16e-12 68.2
MsG0880047665.01.T01 AT4G26640 55.128 78 34 1 247 324 188 264 6.54e-24 103
MsG0880047665.01.T01 AT4G26640 38.095 84 50 2 241 324 12 93 4.16e-12 68.2
MsG0880047665.01.T01 AT4G26640 55.128 78 34 1 247 324 188 264 6.54e-24 103
MsG0880047665.01.T01 AT4G26640 38.095 84 50 2 241 324 12 93 4.16e-12 68.2
MsG0880047665.01.T01 AT4G26640 55.128 78 34 1 247 324 324 400 1.47e-23 103
MsG0880047665.01.T01 AT4G26640 38.095 84 50 2 241 324 148 229 5.65e-12 68.2
MsG0880047665.01.T01 AT4G26640 55.128 78 34 1 247 324 292 368 1.49e-23 103
MsG0880047665.01.T01 AT4G26640 38.095 84 50 2 241 324 116 197 5.72e-12 68.2
MsG0880047665.01.T01 AT4G26640 55.128 78 34 1 247 324 364 440 1.95e-23 103
MsG0880047665.01.T01 AT4G26640 38.095 84 50 2 241 324 188 269 5.99e-12 68.2
MsG0880047665.01.T01 AT5G56270 50.000 90 44 1 237 326 460 548 2.54e-23 103
MsG0880047665.01.T01 AT5G56270 49.180 61 29 2 265 325 274 332 1.70e-11 67.0
MsG0880047665.01.T01 AT5G26170 52.778 72 33 1 250 321 99 169 3.69e-23 96.7
MsG0880047665.01.T01 AT2G04880 47.674 86 44 1 243 328 262 346 3.72e-23 102
MsG0880047665.01.T01 AT2G04880 31.081 148 82 5 262 398 109 247 4.77e-13 71.6
MsG0880047665.01.T01 AT2G04880 47.674 86 44 1 243 328 286 370 5.08e-23 102
MsG0880047665.01.T01 AT2G04880 47.143 70 34 3 262 330 109 176 1.34e-12 70.1
MsG0880047665.01.T01 AT1G29860 46.392 97 48 2 248 344 120 212 6.78e-23 99.0
MsG0880047665.01.T01 AT5G49520 51.948 77 36 1 248 324 205 280 6.91e-23 100
MsG0880047665.01.T01 AT5G07100 48.276 87 44 1 238 324 115 200 8.63e-23 96.7
MsG0880047665.01.T01 AT5G07100 39.189 74 44 1 264 337 24 96 3.45e-11 63.2
MsG0880047665.01.T01 AT5G07100 48.276 87 44 1 238 324 115 200 8.63e-23 96.7
MsG0880047665.01.T01 AT5G07100 39.189 74 44 1 264 337 24 96 3.45e-11 63.2
MsG0880047665.01.T01 AT5G07100 48.276 87 44 1 238 324 115 200 8.63e-23 96.7
MsG0880047665.01.T01 AT5G07100 39.189 74 44 1 264 337 24 96 3.45e-11 63.2
MsG0880047665.01.T01 AT5G07100 48.276 87 44 1 238 324 115 200 8.63e-23 96.7
MsG0880047665.01.T01 AT5G07100 39.189 74 44 1 264 337 24 96 3.45e-11 63.2
MsG0880047665.01.T01 AT1G13960 51.190 84 40 1 241 324 233 315 1.11e-22 99.8
MsG0880047665.01.T01 AT1G13960 49.180 61 29 2 264 324 76 134 6.02e-12 67.4
MsG0880047665.01.T01 AT1G13960 51.190 84 40 1 241 324 386 468 1.14e-22 101
MsG0880047665.01.T01 AT1G13960 49.180 61 29 2 264 324 229 287 4.96e-12 68.6
MsG0880047665.01.T01 AT5G07100 48.276 87 44 1 238 324 208 293 1.31e-22 98.6
MsG0880047665.01.T01 AT5G07100 39.189 74 44 1 264 337 117 189 7.17e-11 63.9
MsG0880047665.01.T01 AT2G03340 48.837 86 43 1 241 326 392 476 1.05e-21 98.6
MsG0880047665.01.T01 AT2G03340 49.180 61 29 2 264 324 250 308 2.51e-12 69.3
MsG0880047665.01.T01 AT4G18170 51.948 77 36 1 248 324 156 231 1.70e-21 95.5
MsG0880047665.01.T01 AT2G47260 45.161 93 50 1 240 332 150 241 1.77e-21 95.9
MsG0880047665.01.T01 AT5G13080 53.425 73 33 1 251 323 54 125 2.00e-21 90.9
MsG0880047665.01.T01 AT1G64000 45.882 85 45 1 238 322 88 171 2.22e-21 92.4
MsG0880047665.01.T01 AT5G41570 51.250 80 37 2 244 322 77 155 5.51e-21 90.5
MsG0880047665.01.T01 AT2G46130 47.126 87 45 1 236 322 2 87 7.16e-21 88.2
MsG0880047665.01.T01 AT4G31800 32.500 200 104 5 111 301 36 213 1.02e-20 91.7
MsG0880047665.01.T01 AT1G55600 43.333 90 50 1 237 326 280 368 1.53e-20 94.7
MsG0880047665.01.T01 AT4G26440 41.071 112 63 2 237 348 345 453 1.54e-20 95.1
MsG0880047665.01.T01 AT3G01080 46.429 84 44 1 241 324 283 365 2.13e-20 93.6
MsG0880047665.01.T01 AT3G01080 49.180 61 29 2 264 324 167 225 7.27e-11 64.7
MsG0880047665.01.T01 AT3G62340 53.165 79 36 1 251 329 105 182 2.37e-20 91.3
MsG0880047665.01.T01 AT3G01080 49.367 79 39 1 246 324 326 403 2.58e-20 94.0
MsG0880047665.01.T01 AT3G01080 49.180 61 29 2 264 324 205 263 8.65e-11 64.3
MsG0880047665.01.T01 AT4G30935 41.176 119 58 3 231 341 298 412 2.81e-20 94.0
MsG0880047665.01.T01 AT2G30250 50.000 80 39 1 247 326 311 389 3.98e-20 92.8
MsG0880047665.01.T01 AT1G69310 45.783 83 44 1 239 321 122 203 4.18e-20 90.9
MsG0880047665.01.T01 AT1G69310 45.783 83 44 1 239 321 122 203 4.18e-20 90.9
MsG0880047665.01.T01 AT1G69310 45.783 83 44 1 239 321 122 203 4.18e-20 90.9
MsG0880047665.01.T01 AT5G46350 50.000 74 36 1 251 324 170 242 4.62e-20 91.7
MsG0880047665.01.T01 AT3G01970 51.389 72 34 1 250 321 51 121 1.66e-19 85.5
MsG0880047665.01.T01 AT2G30590 50.000 82 40 1 248 328 297 378 9.86e-19 88.2
MsG0880047665.01.T01 AT2G23320 59.322 59 24 0 265 323 241 299 1.00e-18 87.4
MsG0880047665.01.T01 AT5G64810 47.887 71 36 1 251 321 97 166 1.08e-18 84.7
MsG0880047665.01.T01 AT3G58710 42.056 107 47 2 233 324 25 131 1.12e-18 86.3
MsG0880047665.01.T01 AT3G58710 42.453 106 47 2 233 324 25 130 1.87e-18 85.9
MsG0880047665.01.T01 AT5G28650 59.649 57 23 0 265 321 263 319 3.87e-18 85.9
MsG0880047665.01.T01 AT2G44745 46.667 75 39 1 247 321 128 201 3.91e-18 83.6
MsG0880047665.01.T01 AT1G29280 52.459 61 29 0 264 324 74 134 7.36e-18 83.6
MsG0880047665.01.T01 AT4G39410 48.000 75 38 1 247 321 206 279 1.23e-17 84.0
MsG0880047665.01.T01 AT3G04670 57.895 57 24 0 265 321 263 319 2.10e-17 83.6
MsG0880047665.01.T01 AT4G24240 48.684 76 39 0 248 323 265 340 3.24e-17 83.6
MsG0880047665.01.T01 AT4G31550 48.649 74 38 0 248 321 230 303 3.56e-17 82.8
MsG0880047665.01.T01 AT4G31550 48.649 74 38 0 248 321 229 302 3.79e-17 82.8
MsG0880047665.01.T01 AT2G24570 48.649 74 38 0 248 321 227 300 4.94e-17 82.4
MsG0880047665.01.T01 AT5G52830 46.753 77 41 0 258 334 159 235 1.40e-16 81.6
MsG0880047665.01.T01 AT4G01250 40.426 94 51 1 246 334 105 198 1.43e-16 80.9
MsG0880047665.01.T01 AT2G37260 45.977 87 41 3 259 340 264 349 1.69e-16 81.3
MsG0880047665.01.T01 AT2G37260 36.538 104 60 3 265 364 86 187 5.97e-14 73.6
MsG0880047665.01.T01 AT2G37260 45.977 87 41 3 259 340 262 347 1.74e-16 81.3
MsG0880047665.01.T01 AT2G37260 36.538 104 60 3 265 364 84 185 6.04e-14 73.6
MsG0880047665.01.T01 AT2G34830 46.053 76 40 1 250 324 200 275 1.97e-16 81.6
MsG0880047665.01.T01 AT2G34830 46.053 76 40 1 250 324 209 284 2.16e-16 81.6
MsG0880047665.01.T01 AT1G30650 46.053 76 40 1 250 324 202 277 2.33e-16 81.6
MsG0880047665.01.T01 AT2G37260 45.977 87 41 3 259 340 344 429 3.48e-16 80.9
MsG0880047665.01.T01 AT2G37260 43.243 74 40 2 265 338 166 237 1.15e-13 73.2
MsG0880047665.01.T01 AT2G46130 43.678 87 44 2 236 322 2 83 7.78e-16 73.6
MsG0880047665.01.T01 AT4G23550 41.975 81 47 0 259 339 135 215 1.00e-15 78.6
MsG0880047665.01.T01 AT1G69310 42.169 83 43 2 239 321 122 199 3.78e-15 76.3
MsG0880047665.01.T01 AT5G43290 35.455 110 52 3 221 329 87 178 7.22e-15 75.1
MsG0880047665.01.T01 AT5G45050 40.449 89 41 1 264 340 1152 1240 1.54e-13 73.9
MsG0880047665.01.T01 AT5G45050 40.449 89 41 1 264 340 1180 1268 1.55e-13 73.9
MsG0880047665.01.T01 AT5G45050 40.449 89 41 1 264 340 1041 1129 1.90e-13 73.6
MsG0880047665.01.T01 AT2G21900 43.548 62 34 1 263 324 108 168 2.43e-13 69.3
MsG0880047665.01.T01 AT2G46400 42.500 80 44 1 243 320 83 162 3.54e-12 67.4
MsG0880047665.01.T01 AT5G24110 50.000 60 28 1 263 320 112 171 5.99e-12 67.0
MsG0880047665.01.T01 AT5G45260 37.255 102 57 3 240 339 1189 1285 6.95e-12 68.6
MsG0880047665.01.T01 AT2G40740 35.849 106 51 3 264 352 173 278 2.51e-11 65.1
MsG0880047665.01.T01 AT2G40740 35.849 106 51 3 264 352 182 287 3.17e-11 64.7
MsG0880047665.01.T01 AT3G01080 49.180 61 29 2 264 324 205 263 4.76e-11 64.3

Find 132 sgRNAs with CRISPR-Local

Find 180 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATTTGAAGGCCGGAGAATT+TGG 0.150973 8:+89399336 None:intergenic
AAGAATTCTGGCTAGTAAAT+TGG 0.190593 8:+89399546 None:intergenic
TCAGCATTTCCTTCAGCTTT+TGG 0.196513 8:+89400555 None:intergenic
TCTTTAATAGTTCGGATATT+AGG 0.252279 8:-89398857 MsG0880047665.01.T01:three_prime_UTR
GCTGCTACTGTGTTACTATC+TGG 0.288928 8:-89399601 MsG0880047665.01.T01:CDS
GGCATTGGAGGGGTTTAATC+TGG 0.291166 8:+89400164 None:intergenic
AGGAGGAGCAGCACCAATTA+TGG 0.310343 8:+89399198 None:intergenic
GAGGCTGTCCAAGCTGGAAT+TGG 0.315291 8:+89399416 None:intergenic
CTGTTTGGCAAGAGAGCTTA+TGG 0.316403 8:-89399079 MsG0880047665.01.T01:three_prime_UTR
CACTTCCGGTGTTAGTAATA+AGG 0.320090 8:+89400884 None:intergenic
AGAATTCTGGCTAGTAAATT+GGG 0.323046 8:+89399547 None:intergenic
TTCTGAGGTGTGCATGGTTC+AGG 0.327374 8:+89400252 None:intergenic
ATCAGAACTAGTACAACTTT+TGG 0.338708 8:-89400202 MsG0880047665.01.T01:CDS
CACCATTGATTGATCACTTC+CGG 0.338711 8:+89400870 None:intergenic
GGATGCCAATGGCGAAAATA+TGG 0.339559 8:-89399955 MsG0880047665.01.T01:CDS
GGTAGCACTGTTGATGATAT+TGG 0.345701 8:+89399155 None:intergenic
GAAACATCATCAAGTTGTTC+TGG 0.348285 8:+89401352 None:intergenic
CCTGATCATGTTCTGTGGTT+TGG 0.349953 8:+89400465 None:intergenic
GCTGCTATCTCCTCCATAAT+TGG 0.361075 8:-89399211 MsG0880047665.01.T01:CDS
TGCTTGATCAGCGGCATTGG+AGG 0.372243 8:+89400152 None:intergenic
GTAGCACTGTTGATGATATT+GGG 0.374246 8:+89399156 None:intergenic
TTGTTTCATCTTTAATAGTT+CGG 0.380724 8:-89398865 MsG0880047665.01.T01:three_prime_UTR
TTGGGTTCTATAAGTCTGTT+TGG 0.383456 8:-89399094 MsG0880047665.01.T01:three_prime_UTR
GCGAGTGCTGCCGTGAAGTT+TGG 0.385939 8:+89399235 None:intergenic
CGGCATGAATCGTGTAACTA+TGG 0.386196 8:-89401416 MsG0880047665.01.T01:CDS
CTTGGACAGCCTCAAAACTT+TGG 0.392430 8:-89399406 MsG0880047665.01.T01:CDS
AGAGCAATTAGGAAGAATTC+TGG 0.399082 8:+89399534 None:intergenic
TTACAGATGCACAATGGCTC+TGG 0.402318 8:-89399893 MsG0880047665.01.T01:CDS
AGACTCACTTGTTTGCGAAC+GGG 0.403359 8:+89399865 None:intergenic
AGTTCTGATGCGTCTGGATC+AGG 0.404046 8:+89400216 None:intergenic
TGATCATCCACTTCTGCTGC+TGG 0.410282 8:+89400282 None:intergenic
CCTGTTGAGTTGGATGCAAC+TGG 0.412568 8:+89399290 None:intergenic
TACCATGTGGGCTTCTGATC+GGG 0.414425 8:+89400086 None:intergenic
TTCAGGAAGCTAGAAGCTCT+TGG 0.420968 8:-89399113 MsG0880047665.01.T01:three_prime_UTR
CAACATCTTGAGACATTTGA+AGG 0.433132 8:+89399323 None:intergenic
CTGTAATATGCGCGAGGACA+AGG 0.435386 8:+89399910 None:intergenic
TATCTGTAGTGTCGCGTGTA+AGG 0.437510 8:+89399458 None:intergenic
CCAGTTGCATCCAACTCAAC+AGG 0.445863 8:-89399290 MsG0880047665.01.T01:CDS
TCAGGAAGCTAGAAGCTCTT+GGG 0.449470 8:-89399112 MsG0880047665.01.T01:three_prime_UTR
AGGCTGTCCAAGCTGGAATT+GGG 0.454087 8:+89399417 None:intergenic
TCCTAATTGCTCTTCTAGCA+TGG 0.455237 8:-89399524 MsG0880047665.01.T01:CDS
TATAACCAATCCAAATTCTC+CGG 0.471393 8:-89399346 MsG0880047665.01.T01:CDS
GTGTGCATGGTTCAGGCTCT+TGG 0.473309 8:+89400259 None:intergenic
GAAATTGACCTGTTCAGTCT+TGG 0.478191 8:+89400810 None:intergenic
TACTGTTATTGTTGCTGAGG+AGG 0.478273 8:+89399181 None:intergenic
GCTGCGGTGGTCGATGCCAT+TGG 0.480782 8:+89399625 None:intergenic
CTGCTACTGTGTTACTATCT+GGG 0.480934 8:-89399600 MsG0880047665.01.T01:CDS
GCTTGATCAGCGGCATTGGA+GGG 0.485891 8:+89400153 None:intergenic
GAAGTTTGGATCCGCGGTGA+TGG 0.486096 8:+89399249 None:intergenic
CAGCCTCAAAACTTTGGATC+AGG 0.489452 8:-89399400 MsG0880047665.01.T01:CDS
TCTAGTGTCACAGTAGGAAA+TGG 0.493043 8:+89399481 None:intergenic
TGAAACAATGAAGAAAAGAA+TGG 0.494957 8:+89398917 None:intergenic
TGTACTAGTTCTGATGCGTC+TGG 0.496058 8:+89400210 None:intergenic
TAAGCGTGCCAAGACTGAAC+AGG 0.497408 8:-89400818 MsG0880047665.01.T01:intron
ATTTGCTTGATCAGCGGCAT+TGG 0.498345 8:+89400149 None:intergenic
GGCTCTTTCTGATTGTTCTG+AGG 0.499101 8:+89400237 None:intergenic
GGCATAGCAGCAGGTGGGAG+TGG 0.499597 8:+89399646 None:intergenic
ATCTTGAGACATTTGAAGGC+CGG 0.503538 8:+89399327 None:intergenic
TAGCAGCAGGTGGGAGTGGA+TGG 0.505934 8:+89399650 None:intergenic
CAAAACGTAAATAGACTCAT+AGG 0.506826 8:+89399056 None:intergenic
GACTCACTTGTTTGCGAACG+GGG 0.507020 8:+89399866 None:intergenic
TCTCCTTCCCAATTCCAGCT+TGG 0.508244 8:-89399424 MsG0880047665.01.T01:CDS
CTTGATCAGCGGCATTGGAG+GGG 0.514641 8:+89400154 None:intergenic
CCAAACCACAGAACATGATC+AGG 0.515476 8:-89400465 MsG0880047665.01.T01:intron
ATACCATGTGGGCTTCTGAT+CGG 0.516534 8:+89400085 None:intergenic
ATGAATCTAATAAGCACAAA+CGG 0.517014 8:-89401487 MsG0880047665.01.T01:CDS
GGTCAATGTCAAGTGCTGAT+GGG 0.517767 8:-89399579 MsG0880047665.01.T01:CDS
GGGTCAATGTCAAGTGCTGA+TGG 0.517914 8:-89399580 MsG0880047665.01.T01:CDS
TGATTGTTCTGAGGTGTGCA+TGG 0.520062 8:+89400246 None:intergenic
GCCATGCTAGAAGAGCAATT+AGG 0.522733 8:+89399523 None:intergenic
AAAGGAAAAGCTGAGGAGAA+AGG 0.526527 8:-89400339 MsG0880047665.01.T01:CDS
GAGCAATTGCAAGAGGAGCT+TGG 0.529769 8:-89400596 MsG0880047665.01.T01:CDS
AAAGCTGAGGAGAAAGGAGA+TGG 0.531880 8:-89400333 MsG0880047665.01.T01:CDS
GCATTGGAGGGGTTTAATCT+GGG 0.534841 8:+89400165 None:intergenic
GATGCCATTGGCATAGCAGC+AGG 0.540165 8:+89399637 None:intergenic
GTTTGGATCCGCGGTGATGG+CGG 0.540992 8:+89399252 None:intergenic
GATCAATCAATGGTGGATGA+TGG 0.542601 8:-89400862 MsG0880047665.01.T01:CDS
TTAATCTGGGAAGCTGACTT+CGG 0.543926 8:+89400178 None:intergenic
TCACAATTGCAGATCAATGA+TGG 0.544968 8:-89399976 MsG0880047665.01.T01:intron
TGTGGGCTTCTGATCGGGCA+CGG 0.545553 8:+89400091 None:intergenic
GGACAGTTAAAATGAATTTG+TGG 0.545612 8:-89398986 MsG0880047665.01.T01:three_prime_UTR
TACAGATGCACAATGGCTCT+GGG 0.545795 8:-89399892 MsG0880047665.01.T01:CDS
AGTGATGATGCCTGTTGAGT+TGG 0.552709 8:+89399280 None:intergenic
CACCGGAAGTGATCAATCAA+TGG 0.556816 8:-89400872 MsG0880047665.01.T01:CDS
CTTCAAATGTCTCAAGATGT+TGG 0.558376 8:-89399322 MsG0880047665.01.T01:CDS
CAGACTCACTTGTTTGCGAA+CGG 0.559552 8:+89399864 None:intergenic
CACAGTAGCAGCAGCTGCGG+TGG 0.562058 8:+89399612 None:intergenic
GAATGGTCCAGCAGCAGAAG+TGG 0.565888 8:-89400289 MsG0880047665.01.T01:CDS
TTCTGCATTTGCTTGATCAG+CGG 0.571955 8:+89400143 None:intergenic
CCCACCTGCTGCTATGCCAA+TGG 0.574594 8:-89399641 MsG0880047665.01.T01:CDS
GAAGGCCGGAGAATTTGGAT+TGG 0.577352 8:+89399341 None:intergenic
CGCGACACTACAGATAATAA+CGG 0.582926 8:-89399451 MsG0880047665.01.T01:CDS
GCCATTGGCATAGCAGCAGG+TGG 0.589340 8:+89399640 None:intergenic
TGTAATATGCGCGAGGACAA+GGG 0.590385 8:+89399911 None:intergenic
CAACTCCTTATTACTAACAC+CGG 0.591469 8:-89400889 MsG0880047665.01.T01:CDS
GATTACTGTTATTGTTGCTG+AGG 0.592824 8:+89399178 None:intergenic
CAAATGTCTCAAGATGTTGG+AGG 0.596501 8:-89399319 MsG0880047665.01.T01:CDS
AATCACCTGATCATGTTCTG+TGG 0.597094 8:+89400460 None:intergenic
GTGCTTATTAGATTCATCGT+CGG 0.598438 8:+89401493 None:intergenic
ATTATAGGTTCAACGTTGTG+CGG 0.604622 8:-89399716 MsG0880047665.01.T01:intron
CGCATATTACAGATGCACAA+TGG 0.609217 8:-89399899 MsG0880047665.01.T01:CDS
TGCAGAGAACCAAAAGCTGA+AGG 0.611336 8:-89400564 MsG0880047665.01.T01:CDS
CACCGCGGATCCAAACTTCA+CGG 0.616851 8:-89399245 MsG0880047665.01.T01:CDS
TGCCCGATCAGAAGCCCACA+TGG 0.617135 8:-89400088 MsG0880047665.01.T01:intron
CGGAAGTGATCAATCAATGG+TGG 0.617601 8:-89400869 MsG0880047665.01.T01:CDS
TGCCGTGAAGTTTGGATCCG+CGG 0.618501 8:+89399243 None:intergenic
GTCAATGTCAAGTGCTGATG+GGG 0.622615 8:-89399578 MsG0880047665.01.T01:CDS
TGTCCAAGCTGGAATTGGGA+AGG 0.625433 8:+89399421 None:intergenic
AGGAGCAGCACCAATTATGG+AGG 0.625578 8:+89399201 None:intergenic
TTAGACGGAGCAATTGCAAG+AGG 0.625946 8:-89400603 MsG0880047665.01.T01:intron
GAATTCTGGCTAGTAAATTG+GGG 0.628387 8:+89399548 None:intergenic
GTGGCTAGAAAGTTGATGAA+TGG 0.628570 8:-89400306 MsG0880047665.01.T01:CDS
GTAAGGTCTAGTGTCACAGT+AGG 0.632116 8:+89399475 None:intergenic
TGAGGAGAAAGGAGATGGTG+TGG 0.634590 8:-89400328 MsG0880047665.01.T01:CDS
TGTAGTAATATATATAACAA+AGG 0.640111 8:-89401596 MsG0880047665.01.T01:five_prime_UTR
ATAGGTTCAACGTTGTGCGG+AGG 0.648017 8:-89399713 MsG0880047665.01.T01:intron
TGGTGCTGATGCTGAGAGTG+TGG 0.648731 8:+89399501 None:intergenic
CCATTGGCATAGCAGCAGGT+GGG 0.656238 8:+89399641 None:intergenic
AGTGCTTGTGCAATCACTTG+TGG 0.658579 8:+89399370 None:intergenic
TAACACAGTAGCAGCAGCTG+CGG 0.661912 8:+89399609 None:intergenic
TAAGCACAAACGGAGCAACA+TGG 0.662166 8:-89401477 MsG0880047665.01.T01:CDS
GATCGTCAAAGGAAAAGCTG+AGG 0.663299 8:-89400346 MsG0880047665.01.T01:CDS
CTGTTGAGTTGGATGCAACT+GGG 0.664888 8:+89399291 None:intergenic
GTGCATCTGTAATATGCGCG+AGG 0.676244 8:+89399904 None:intergenic
ACTAATATAGTATACCATGT+GGG 0.681722 8:+89400074 None:intergenic
AGATCAATGATGGATGCCAA+TGG 0.705200 8:-89399966 MsG0880047665.01.T01:CDS
AATGAAGATGATCAAAATCG+CGG 0.707922 8:-89401439 MsG0880047665.01.T01:CDS
GGAGAAAGGAGATGGTGTGG+TGG 0.745088 8:-89400325 MsG0880047665.01.T01:CDS
TCAGCGCGGAGATTGCAATG+AGG 0.745989 8:+89401289 None:intergenic
ACTAAGTGCCGCCATCACCG+CGG 0.753006 8:-89399260 MsG0880047665.01.T01:CDS
GAAGATGATCAAAATCGCGG+CGG 0.753200 8:-89401436 MsG0880047665.01.T01:CDS
TTACGTTGACATGGTCAGCG+CGG 0.778275 8:+89401275 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAAAAAAGAAAGAAAAAA+TGG + Chr8:89399169-89399188 None:intergenic 10.0%
!! ATTAGTGAAATAAAAAATAT+TGG - Chr8:89399354-89399373 MsG0880047665.01.T01:CDS 10.0%
!! AAAATGAAATTAAACTAAGA+TGG + Chr8:89399640-89399659 None:intergenic 15.0%
!! AATATTTATCATAGGAATTA+CGG - Chr8:89399458-89399477 MsG0880047665.01.T01:CDS 15.0%
!! AATGTGAAAATATTTATCAT+AGG - Chr8:89399450-89399469 MsG0880047665.01.T01:CDS 15.0%
!! TGTAGTAATATATATAACAA+AGG - Chr8:89398821-89398840 MsG0880047665.01.T01:three_prime_UTR 15.0%
!!! TAGTTTAATTTCATTTTACA+GGG - Chr8:89399643-89399662 MsG0880047665.01.T01:CDS 15.0%
!!! TAGTTTTTTAAAAAGAAAGT+GGG - Chr8:89401410-89401429 MsG0880047665.01.T01:CDS 15.0%
!!! TGTTTCATTTGAAATATTAT+AGG - Chr8:89400686-89400705 MsG0880047665.01.T01:intron 15.0%
!!! TTAGTTTAATTTCATTTTAC+AGG - Chr8:89399642-89399661 MsG0880047665.01.T01:CDS 15.0%
!!! TTAGTTTTTTAAAAAGAAAG+TGG - Chr8:89401409-89401428 MsG0880047665.01.T01:CDS 15.0%
!! AGAAATATAAGGAAAATACT+TGG - Chr8:89399210-89399229 MsG0880047665.01.T01:CDS 20.0%
!! AGTTACAAAGTAGAAATATA+AGG - Chr8:89399199-89399218 MsG0880047665.01.T01:CDS 20.0%
!! ATTAGTTAATTAAATCAGCT+AGG + Chr8:89400418-89400437 None:intergenic 20.0%
!! TAAAAAACTAAAGAATGCTA+TGG + Chr8:89401400-89401419 None:intergenic 20.0%
!! TTGAAATGAAATTATGAAAC+TGG - Chr8:89400024-89400043 MsG0880047665.01.T01:intron 20.0%
!! TTGTTTCATCTTTAATAGTT+CGG - Chr8:89401552-89401571 MsG0880047665.01.T01:five_prime_UTR 20.0%
!!! ACACTTGTTAAATTTTTAGA+CGG - Chr8:89399799-89399818 MsG0880047665.01.T01:intron 20.0%
!!! AGTTTAATTTCATTTTACAG+GGG - Chr8:89399644-89399663 MsG0880047665.01.T01:CDS 20.0%
!!! ATTTTGATAACAACATATGA+AGG - Chr8:89400735-89400754 MsG0880047665.01.T01:intron 20.0%
!!! GGTATAAAGATATTTTAAAC+TGG + Chr8:89399999-89400018 None:intergenic 20.0%
!!! TCATAATTTCATTTCAAGTA+CGG + Chr8:89400021-89400040 None:intergenic 20.0%
!!! TTTTGATAACAACATATGAA+GGG - Chr8:89400736-89400755 MsG0880047665.01.T01:intron 20.0%
! AATGAAATTATGAAACTGGA+TGG - Chr8:89400028-89400047 MsG0880047665.01.T01:intron 25.0%
! ACTAATATAGTATACCATGT+GGG + Chr8:89400346-89400365 None:intergenic 25.0%
! AGTAAATACGATATTTGGTT+TGG + Chr8:89399239-89399258 None:intergenic 25.0%
! ATGAATCTAATAAGCACAAA+CGG - Chr8:89398930-89398949 MsG0880047665.01.T01:three_prime_UTR 25.0%
! CAAACAGTAAATACGATATT+TGG + Chr8:89399244-89399263 None:intergenic 25.0%
! TCTTTAATAGTTCGGATATT+AGG - Chr8:89401560-89401579 MsG0880047665.01.T01:five_prime_UTR 25.0%
! TGAAACAATGAAGAAAAGAA+TGG + Chr8:89401503-89401522 None:intergenic 25.0%
!! AAAAATATGCTACTGATTGT+AGG + Chr8:89401286-89401305 None:intergenic 25.0%
!! ATTTTACTTATGCTCACTAT+AGG - Chr8:89401460-89401479 MsG0880047665.01.T01:CDS 25.0%
!! CATAATTTCATTTCAAGTAC+GGG + Chr8:89400020-89400039 None:intergenic 25.0%
!! GTAAATACGATATTTGGTTT+GGG + Chr8:89399238-89399257 None:intergenic 25.0%
!! TTTACATTTTAGATCGTCAA+AGG - Chr8:89400060-89400079 MsG0880047665.01.T01:intron 25.0%
!!! TAAATACGATATTTGGTTTG+GGG + Chr8:89399237-89399256 None:intergenic 25.0%
AATGAAGATGATCAAAATCG+CGG - Chr8:89398978-89398997 MsG0880047665.01.T01:three_prime_UTR 30.0%
CAAAACGTAAATAGACTCAT+AGG + Chr8:89401364-89401383 None:intergenic 30.0%
CACTAATATAGTATACCATG+TGG + Chr8:89400347-89400366 None:intergenic 30.0%
GCGAAAATATGGACAAAAAA+TGG - Chr8:89400473-89400492 MsG0880047665.01.T01:CDS 30.0%
GGACAGTTAAAATGAATTTG+TGG - Chr8:89401431-89401450 MsG0880047665.01.T01:CDS 30.0%
TATAACCAATCCAAATTCTC+CGG - Chr8:89401071-89401090 MsG0880047665.01.T01:intron 30.0%
TATGGACAAAAAATGGCTAA+AGG - Chr8:89400480-89400499 MsG0880047665.01.T01:CDS 30.0%
TTGATGCAAATATTGTAGAC+TGG - Chr8:89399501-89399520 MsG0880047665.01.T01:CDS 30.0%
! AAGAATTCTGGCTAGTAAAT+TGG + Chr8:89400874-89400893 None:intergenic 30.0%
! AGAATTCTGGCTAGTAAATT+GGG + Chr8:89400873-89400892 None:intergenic 30.0%
! ATCAGAACTAGTACAACTTT+TGG - Chr8:89400215-89400234 MsG0880047665.01.T01:CDS 30.0%
! CAATCAGTAGCATATTTTTC+AGG - Chr8:89401287-89401306 MsG0880047665.01.T01:CDS 30.0%
!! TCATAATTACCTTTGAAGTG+TGG - Chr8:89399384-89399403 MsG0880047665.01.T01:CDS 30.0%
AAAAATGGCTTACGTTGACA+TGG + Chr8:89399154-89399173 None:intergenic 35.0%
AAATCACAACCACACTTCAA+AGG + Chr8:89399396-89399415 None:intergenic 35.0%
AGAGCAATTAGGAAGAATTC+TGG + Chr8:89400886-89400905 None:intergenic 35.0%
ATTATAGGTTCAACGTTGTG+CGG - Chr8:89400701-89400720 MsG0880047665.01.T01:intron 35.0%
CAACATCTTGAGACATTTGA+AGG + Chr8:89401097-89401116 None:intergenic 35.0%
CAACTCCTTATTACTAACAC+CGG - Chr8:89399528-89399547 MsG0880047665.01.T01:CDS 35.0%
CTTCAAATGTCTCAAGATGT+TGG - Chr8:89401095-89401114 MsG0880047665.01.T01:intron 35.0%
GATTACTGTTATTGTTGCTG+AGG + Chr8:89401242-89401261 None:intergenic 35.0%
GTGCTTATTAGATTCATCGT+CGG + Chr8:89398927-89398946 None:intergenic 35.0%
TCACAATTGCAGATCAATGA+TGG - Chr8:89400441-89400460 MsG0880047665.01.T01:intron 35.0%
TTGGGTTCTATAAGTCTGTT+TGG - Chr8:89401323-89401342 MsG0880047665.01.T01:CDS 35.0%
! GAAACATCATCAAGTTGTTC+TGG + Chr8:89399068-89399087 None:intergenic 35.0%
! GAATTCTGGCTAGTAAATTG+GGG + Chr8:89400872-89400891 None:intergenic 35.0%
! TTTGTCCATATTTTCGCCAT+TGG + Chr8:89400470-89400489 None:intergenic 35.0%
!! GTAGCACTGTTGATGATATT+GGG + Chr8:89401264-89401283 None:intergenic 35.0%
!! GTTTTGTTGCTGTTGCATTA+AGG + Chr8:89399933-89399952 None:intergenic 35.0%
AAAGGAAAAGCTGAGGAGAA+AGG - Chr8:89400078-89400097 MsG0880047665.01.T01:intron 40.0%
AATCACCTGATCATGTTCTG+TGG + Chr8:89399960-89399979 None:intergenic 40.0%
ATCTTGAGACATTTGAAGGC+CGG + Chr8:89401093-89401112 None:intergenic 40.0%
CAAATGTCTCAAGATGTTGG+AGG - Chr8:89401098-89401117 MsG0880047665.01.T01:intron 40.0%
CGCATATTACAGATGCACAA+TGG - Chr8:89400518-89400537 MsG0880047665.01.T01:CDS 40.0%
CGCGACACTACAGATAATAA+CGG - Chr8:89400966-89400985 MsG0880047665.01.T01:intron 40.0%
GAAATTGACCTGTTCAGTCT+TGG + Chr8:89399610-89399629 None:intergenic 40.0%
GACGCATATTATGAGACGAA+AGG + Chr8:89400656-89400675 None:intergenic 40.0%
TACTGTTATTGTTGCTGAGG+AGG + Chr8:89401239-89401258 None:intergenic 40.0%
TCCTAATTGCTCTTCTAGCA+TGG - Chr8:89400893-89400912 MsG0880047665.01.T01:CDS 40.0%
TCTAGTGTCACAGTAGGAAA+TGG + Chr8:89400939-89400958 None:intergenic 40.0%
TTCTGCATTTGCTTGATCAG+CGG + Chr8:89400277-89400296 None:intergenic 40.0%
! CACCATTGATTGATCACTTC+CGG + Chr8:89399550-89399569 None:intergenic 40.0%
! CACTTCCGGTGTTAGTAATA+AGG + Chr8:89399536-89399555 None:intergenic 40.0%
! CTGCTACTGTGTTACTATCT+GGG - Chr8:89400817-89400836 MsG0880047665.01.T01:intron 40.0%
! TCAGCATTTCCTTCAGCTTT+TGG + Chr8:89399865-89399884 None:intergenic 40.0%
! TGTCCTGATCCAAAGTTTTG+AGG + Chr8:89401023-89401042 None:intergenic 40.0%
! TTAATCTGGGAAGCTGACTT+CGG + Chr8:89400242-89400261 None:intergenic 40.0%
!! AGATCAATGATGGATGCCAA+TGG - Chr8:89400451-89400470 MsG0880047665.01.T01:intron 40.0%
!! GATCAATCAATGGTGGATGA+TGG - Chr8:89399555-89399574 MsG0880047665.01.T01:CDS 40.0%
!! GGTAGCACTGTTGATGATAT+TGG + Chr8:89401265-89401284 None:intergenic 40.0%
!! GTGGCTAGAAAGTTGATGAA+TGG - Chr8:89400111-89400130 MsG0880047665.01.T01:CDS 40.0%
AAAGCTGAGGAGAAAGGAGA+TGG - Chr8:89400084-89400103 MsG0880047665.01.T01:intron 45.0%
AGACTCACTTGTTTGCGAAC+GGG + Chr8:89400555-89400574 None:intergenic 45.0%
AGTGCTTGTGCAATCACTTG+TGG + Chr8:89401050-89401069 None:intergenic 45.0%
ATACCATGTGGGCTTCTGAT+CGG + Chr8:89400335-89400354 None:intergenic 45.0%
ATTTGCTTGATCAGCGGCAT+TGG + Chr8:89400271-89400290 None:intergenic 45.0%
CACCGGAAGTGATCAATCAA+TGG - Chr8:89399545-89399564 MsG0880047665.01.T01:CDS 45.0%
CAGACTCACTTGTTTGCGAA+CGG + Chr8:89400556-89400575 None:intergenic 45.0%
CAGCCTCAAAACTTTGGATC+AGG - Chr8:89401017-89401036 MsG0880047665.01.T01:intron 45.0%
CATTTGAAGGCCGGAGAATT+TGG + Chr8:89401084-89401103 None:intergenic 45.0%
CCAAACCACAGAACATGATC+AGG - Chr8:89399952-89399971 MsG0880047665.01.T01:CDS 45.0%
CCTGATCATGTTCTGTGGTT+TGG + Chr8:89399955-89399974 None:intergenic 45.0%
CGGAAGTGATCAATCAATGG+TGG - Chr8:89399548-89399567 MsG0880047665.01.T01:CDS 45.0%
CGGCATGAATCGTGTAACTA+TGG - Chr8:89399001-89399020 MsG0880047665.01.T01:three_prime_UTR 45.0%
CTGTTTGGCAAGAGAGCTTA+TGG - Chr8:89401338-89401357 MsG0880047665.01.T01:CDS 45.0%
CTTGGACAGCCTCAAAACTT+TGG - Chr8:89401011-89401030 MsG0880047665.01.T01:intron 45.0%
GAAGATGATCAAAATCGCGG+CGG - Chr8:89398981-89399000 MsG0880047665.01.T01:three_prime_UTR 45.0%
GATCGTCAAAGGAAAAGCTG+AGG - Chr8:89400071-89400090 MsG0880047665.01.T01:intron 45.0%
GCATTGGAGGGGTTTAATCT+GGG + Chr8:89400255-89400274 None:intergenic 45.0%
GCCATGCTAGAAGAGCAATT+AGG + Chr8:89400897-89400916 None:intergenic 45.0%
GCTGCTATCTCCTCCATAAT+TGG - Chr8:89401206-89401225 MsG0880047665.01.T01:intron 45.0%
GGATGCCAATGGCGAAAATA+TGG - Chr8:89400462-89400481 MsG0880047665.01.T01:intron 45.0%
GGCTCTTTCTGATTGTTCTG+AGG + Chr8:89400183-89400202 None:intergenic 45.0%
GTAAGGTCTAGTGTCACAGT+AGG + Chr8:89400945-89400964 None:intergenic 45.0%
TAAGCACAAACGGAGCAACA+TGG - Chr8:89398940-89398959 MsG0880047665.01.T01:three_prime_UTR 45.0%
TACAGATGCACAATGGCTCT+GGG - Chr8:89400525-89400544 MsG0880047665.01.T01:CDS 45.0%
TATCTGTAGTGTCGCGTGTA+AGG + Chr8:89400962-89400981 None:intergenic 45.0%
TCAGGAAGCTAGAAGCTCTT+GGG - Chr8:89401305-89401324 MsG0880047665.01.T01:CDS 45.0%
TGCAGAGAACCAAAAGCTGA+AGG - Chr8:89399853-89399872 MsG0880047665.01.T01:intron 45.0%
TGTAATATGCGCGAGGACAA+GGG + Chr8:89400509-89400528 None:intergenic 45.0%
TTACAGATGCACAATGGCTC+TGG - Chr8:89400524-89400543 MsG0880047665.01.T01:CDS 45.0%
TTAGACGGAGCAATTGCAAG+AGG - Chr8:89399814-89399833 MsG0880047665.01.T01:intron 45.0%
TTCAGGAAGCTAGAAGCTCT+TGG - Chr8:89401304-89401323 MsG0880047665.01.T01:CDS 45.0%
! AGTGATGATGCCTGTTGAGT+TGG + Chr8:89401140-89401159 None:intergenic 45.0%
! GACTCGTGCTTTTCTCATAG+TGG + Chr8:89400301-89400320 None:intergenic 45.0%
! GCTGCTACTGTGTTACTATC+TGG - Chr8:89400816-89400835 MsG0880047665.01.T01:intron 45.0%
!! CTGTTGAGTTGGATGCAACT+GGG + Chr8:89401129-89401148 None:intergenic 45.0%
!! GGTCAATGTCAAGTGCTGAT+GGG - Chr8:89400838-89400857 MsG0880047665.01.T01:CDS 45.0%
!! GTCAATGTCAAGTGCTGATG+GGG - Chr8:89400839-89400858 MsG0880047665.01.T01:CDS 45.0%
!! TGATTGTTCTGAGGTGTGCA+TGG + Chr8:89400174-89400193 None:intergenic 45.0%
!! TGTACTAGTTCTGATGCGTC+TGG + Chr8:89400210-89400229 None:intergenic 45.0%
!!! TAATTCTATTTATTATTTTT+GGG + Chr8:89401588-89401607 None:intergenic 5.0%
!!! TATTTTTATTTTTATTTTGA+AGG - Chr8:89401527-89401546 MsG0880047665.01.T01:exon 5.0%
!!! TTAATTCTATTTATTATTTT+TGG + Chr8:89401589-89401608 None:intergenic 5.0%
AGGAGCAGCACCAATTATGG+AGG + Chr8:89401219-89401238 None:intergenic 50.0%
AGGAGGAGCAGCACCAATTA+TGG + Chr8:89401222-89401241 None:intergenic 50.0%
AGGCTGTCCAAGCTGGAATT+GGG + Chr8:89401003-89401022 None:intergenic 50.0%
ATAGGTTCAACGTTGTGCGG+AGG - Chr8:89400704-89400723 MsG0880047665.01.T01:intron 50.0%
CCAGTTGCATCCAACTCAAC+AGG - Chr8:89401127-89401146 MsG0880047665.01.T01:intron 50.0%
CGTTCGCAAACAAGTGAGTC+TGG - Chr8:89400554-89400573 MsG0880047665.01.T01:CDS 50.0%
CTGTAATATGCGCGAGGACA+AGG + Chr8:89400510-89400529 None:intergenic 50.0%
GAAGGCCGGAGAATTTGGAT+TGG + Chr8:89401079-89401098 None:intergenic 50.0%
GACTCACTTGTTTGCGAACG+GGG + Chr8:89400554-89400573 None:intergenic 50.0%
GAGCAATTGCAAGAGGAGCT+TGG - Chr8:89399821-89399840 MsG0880047665.01.T01:intron 50.0%
GTGCATCTGTAATATGCGCG+AGG + Chr8:89400516-89400535 None:intergenic 50.0%
TAACACAGTAGCAGCAGCTG+CGG + Chr8:89400811-89400830 None:intergenic 50.0%
TAAGCGTGCCAAGACTGAAC+AGG - Chr8:89399599-89399618 MsG0880047665.01.T01:CDS 50.0%
TACCATGTGGGCTTCTGATC+GGG + Chr8:89400334-89400353 None:intergenic 50.0%
TCTCCTTCCCAATTCCAGCT+TGG - Chr8:89400993-89401012 MsG0880047665.01.T01:intron 50.0%
TGAGGAGAAAGGAGATGGTG+TGG - Chr8:89400089-89400108 MsG0880047665.01.T01:CDS 50.0%
TGATCATCCACTTCTGCTGC+TGG + Chr8:89400138-89400157 None:intergenic 50.0%
TGTCCAAGCTGGAATTGGGA+AGG + Chr8:89400999-89401018 None:intergenic 50.0%
TTACGTTGACATGGTCAGCG+CGG + Chr8:89399145-89399164 None:intergenic 50.0%
! AGTTCTGATGCGTCTGGATC+AGG + Chr8:89400204-89400223 None:intergenic 50.0%
! GGCATTGGAGGGGTTTAATC+TGG + Chr8:89400256-89400275 None:intergenic 50.0%
!! CCTGTTGAGTTGGATGCAAC+TGG + Chr8:89401130-89401149 None:intergenic 50.0%
!! GGGTCAATGTCAAGTGCTGA+TGG - Chr8:89400837-89400856 MsG0880047665.01.T01:CDS 50.0%
!! TTCTGAGGTGTGCATGGTTC+AGG + Chr8:89400168-89400187 None:intergenic 50.0%
!!! AGTTTTGAGGCTGTCCAAGC+TGG + Chr8:89401010-89401029 None:intergenic 50.0%
CACCGCGGATCCAAACTTCA+CGG - Chr8:89401172-89401191 MsG0880047665.01.T01:intron 55.0%
CCATTGGCATAGCAGCAGGT+GGG + Chr8:89400779-89400798 None:intergenic 55.0%
GAAGTTTGGATCCGCGGTGA+TGG + Chr8:89401171-89401190 None:intergenic 55.0%
GAATGGTCCAGCAGCAGAAG+TGG - Chr8:89400128-89400147 MsG0880047665.01.T01:CDS 55.0%
GAGGCTGTCCAAGCTGGAAT+TGG + Chr8:89401004-89401023 None:intergenic 55.0%
GATGCCATTGGCATAGCAGC+AGG + Chr8:89400783-89400802 None:intergenic 55.0%
GGAGAAAGGAGATGGTGTGG+TGG - Chr8:89400092-89400111 MsG0880047665.01.T01:CDS 55.0%
GTGTGCATGGTTCAGGCTCT+TGG + Chr8:89400161-89400180 None:intergenic 55.0%
TCAGCGCGGAGATTGCAATG+AGG + Chr8:89399131-89399150 None:intergenic 55.0%
TGCCGTGAAGTTTGGATCCG+CGG + Chr8:89401177-89401196 None:intergenic 55.0%
! CTTGATCAGCGGCATTGGAG+GGG + Chr8:89400266-89400285 None:intergenic 55.0%
! GCTTGATCAGCGGCATTGGA+GGG + Chr8:89400267-89400286 None:intergenic 55.0%
! TGCTTGATCAGCGGCATTGG+AGG + Chr8:89400268-89400287 None:intergenic 55.0%
!! TGGTGCTGATGCTGAGAGTG+TGG + Chr8:89400919-89400938 None:intergenic 55.0%
CCCACCTGCTGCTATGCCAA+TGG - Chr8:89400776-89400795 MsG0880047665.01.T01:intron 60.0%
GCCATTGGCATAGCAGCAGG+TGG + Chr8:89400780-89400799 None:intergenic 60.0%
TAGCAGCAGGTGGGAGTGGA+TGG + Chr8:89400770-89400789 None:intergenic 60.0%
TGCCCGATCAGAAGCCCACA+TGG - Chr8:89400329-89400348 MsG0880047665.01.T01:CDS 60.0%
TGTGGGCTTCTGATCGGGCA+CGG + Chr8:89400329-89400348 None:intergenic 60.0%
! ACTAAGTGCCGCCATCACCG+CGG - Chr8:89401157-89401176 MsG0880047665.01.T01:intron 60.0%
! GCGAGTGCTGCCGTGAAGTT+TGG + Chr8:89401185-89401204 None:intergenic 60.0%
! GTTTGGATCCGCGGTGATGG+CGG + Chr8:89401168-89401187 None:intergenic 60.0%
CACAGTAGCAGCAGCTGCGG+TGG + Chr8:89400808-89400827 None:intergenic 65.0%
GCTGCGGTGGTCGATGCCAT+TGG + Chr8:89400795-89400814 None:intergenic 65.0%
GGCATAGCAGCAGGTGGGAG+TGG + Chr8:89400774-89400793 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr8 gene 89398819 89401620 89398819 ID=MsG0880047665.01;Name=MsG0880047665.01
Chr8 mRNA 89398819 89401620 89398819 ID=MsG0880047665.01.T01;Parent=MsG0880047665.01;Name=MsG0880047665.01.T01;_AED=0.18;_eAED=0.18;_QI=93|1|1|1|1|1|6|367|481
Chr8 exon 89398819 89399731 89398819 ID=MsG0880047665.01.T01:exon:18157;Parent=MsG0880047665.01.T01
Chr8 exon 89399873 89399986 89399873 ID=MsG0880047665.01.T01:exon:18156;Parent=MsG0880047665.01.T01
Chr8 exon 89400089 89400367 89400089 ID=MsG0880047665.01.T01:exon:18155;Parent=MsG0880047665.01.T01
Chr8 exon 89400466 89400621 89400466 ID=MsG0880047665.01.T01:exon:18154;Parent=MsG0880047665.01.T01
Chr8 exon 89400819 89400920 89400819 ID=MsG0880047665.01.T01:exon:18153;Parent=MsG0880047665.01.T01
Chr8 exon 89401279 89401620 89401279 ID=MsG0880047665.01.T01:exon:18152;Parent=MsG0880047665.01.T01
Chr8 five_prime_UTR 89401528 89401620 89401528 ID=MsG0880047665.01.T01:five_prime_utr;Parent=MsG0880047665.01.T01
Chr8 CDS 89401279 89401527 89401279 ID=MsG0880047665.01.T01:cds;Parent=MsG0880047665.01.T01
Chr8 CDS 89400819 89400920 89400819 ID=MsG0880047665.01.T01:cds;Parent=MsG0880047665.01.T01
Chr8 CDS 89400466 89400621 89400466 ID=MsG0880047665.01.T01:cds;Parent=MsG0880047665.01.T01
Chr8 CDS 89400089 89400367 89400089 ID=MsG0880047665.01.T01:cds;Parent=MsG0880047665.01.T01
Chr8 CDS 89399873 89399986 89399873 ID=MsG0880047665.01.T01:cds;Parent=MsG0880047665.01.T01
Chr8 CDS 89399186 89399731 89399186 ID=MsG0880047665.01.T01:cds;Parent=MsG0880047665.01.T01
Chr8 three_prime_UTR 89398819 89399185 89398819 ID=MsG0880047665.01.T01:three_prime_utr;Parent=MsG0880047665.01.T01
Gene Sequence

>MsG0880047665.01.T01

ATGTTAACATTTCCGACGATGAATCTAATAAGCACAAACGGAGCAACATGGTGTGATGAGAATGAAAATGAAGATGATCAAAATCGCGGCGGCATGAATCGTGTAACTATGGATGAAGTTGATTTCTTCTCAAATGATAAATCATCATCATCGCCAGAACAACTTGATGATGTTTCAATGAAGAATAATAATAATAATATTAATGAGATTTACGATCCTCATTGCAATCTCCGCGCTGACCATGTCAACACTGGTTTACAACTCCTTATTACTAACACCGGAAGTGATCAATCAATGGTGGATGATGGAACTTCAATAAATGCTGAAGATAAGCGTGCCAAGACTGAACAGACGGAGCAATTGCAAGAGGAGCTTGGACGTGTGAATGCAGAGAACCAAAAGCTGAAGGAAATGCTGAGTGACATGAGCAGTAGCTACACAAACTTGCATAAGCGTTTTATGTCCTTAATGCAACAGCAACAAAACCAAACCACAGAACATGATCAGATCGTCAAAGGAAAAGCTGAGGAGAAAGGAGATGGTGTGGTGGCTAGAAAGTTGATGAATGGTCCAGCAGCAGAAGTGGATGATCACCAAGAGCCTGAACCATGCACACCTCAGAACAATCAGAAAGAGCCTGATCCAGACGCATCAGAACTAGTACAACTTTTGGACCGAAGTCAGCTTCCCAGATTAAACCCCTCCAATGCCGCTGATCAAGCAAATGCAGAAGCCACTATGAGAAAAGCACGAGTCTCAGTCCGTGCCCGATCAGAAGCCCACATGATCAATGATGGATGCCAATGGCGAAAATATGGACAAAAAATGGCTAAAGGAAACCCTTGTCCTCGCGCATATTACAGATGCACAATGGCTCTGGGTTGCCCCGTTCGCAAACAAGTTCAACGTTGTGCGGAGGACAGATCAATTTTGATAACAACATATGAAGGGACACATAGCCATCCACTCCCACCTGCTGCTATGCCAATGGCATCGACCACCGCAGCTGCTGCTACTGTGTTACTATCTGGGTCAATGTCAAGTGCTGATGGGGTGATGAACCCCAATTTACTAGCCAGAATTCTTCCTAATTGCTCTTCTAGCATGGCCACACTCTCAGCATCAGCACCATTTCCTACTGTGACACTAGACCTTACACGCGACACTACAGATAATAACGGAAATTCTCCTTCCCAATTCCAGCTTGGACAGCCTCAAAACTTTGGATCAGGACAATTACCACAAGTGATTGCACAAGCACTTTATAACCAATCCAAATTCTCCGGCCTTCAAATGTCTCAAGATGTTGGAGGCTCTTCCCAGTTGCATCCAACTCAACAGGCATCATCACTAAGTGCCGCCATCACCGCGGATCCAAACTTCACGGCAGCACTCGCAGCTGCTATCTCCTCCATAATTGGTGCTGCTCCTCCTCAGCAACAATAA

Protein sequence

>MsG0880047665.01.T01

MLTFPTMNLISTNGATWCDENENEDDQNRGGMNRVTMDEVDFFSNDKSSSSPEQLDDVSMKNNNNNINEIYDPHCNLRADHVNTGLQLLITNTGSDQSMVDDGTSINAEDKRAKTEQTEQLQEELGRVNAENQKLKEMLSDMSSSYTNLHKRFMSLMQQQQNQTTEHDQIVKGKAEEKGDGVVARKLMNGPAAEVDDHQEPEPCTPQNNQKEPDPDASELVQLLDRSQLPRLNPSNAADQANAEATMRKARVSVRARSEAHMINDGCQWRKYGQKMAKGNPCPRAYYRCTMALGCPVRKQVQRCAEDRSILITTYEGTHSHPLPPAAMPMASTTAAAATVLLSGSMSSADGVMNPNLLARILPNCSSSMATLSASAPFPTVTLDLTRDTTDNNGNSPSQFQLGQPQNFGSGQLPQVIAQALYNQSKFSGLQMSQDVGGSSQLHPTQQASSLSAAITADPNFTAALAAAISSIIGAAPPQQQ*