Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180000234.01.T02 | RZB58484.1 | 61.607 | 224 | 55 | 4 | 8 | 204 | 7 | 226 | 1.87E-71 | 230 |
| MsG0180000234.01.T01 | RZB58484.1 | 61.607 | 224 | 55 | 4 | 8 | 204 | 7 | 226 | 1.87E-71 | 230 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180000234.01.T01 | O48723 | 47.647 | 170 | 74 | 4 | 46 | 204 | 159 | 324 | 1.98E-42 | 150 |
| MsG0180000234.01.T02 | O48723 | 47.647 | 170 | 74 | 4 | 46 | 204 | 159 | 324 | 1.98E-42 | 150 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180000234.01.T01 | A0A445GBD8 | 61.607 | 224 | 55 | 4 | 8 | 204 | 7 | 226 | 8.91e-72 | 230 |
| MsG0180000234.01.T02 | A0A445GBD8 | 61.607 | 224 | 55 | 4 | 8 | 204 | 7 | 226 | 8.91e-72 | 230 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048036.01 | MsG0180000234.01 | 0.892479 | 1.529047e-74 | 1.400720e-70 |
| MsG0080048301.01 | MsG0180000234.01 | 0.829071 | 6.318481e-55 | 6.397096e-52 |
| MsG0080048347.01 | MsG0180000234.01 | 0.869622 | 2.696949e-66 | 1.018764e-62 |
| MsG0080048349.01 | MsG0180000234.01 | 0.817789 | 2.747596e-52 | 2.020360e-49 |
| MsG0080048352.01 | MsG0180000234.01 | 0.862844 | 3.801206e-64 | 1.129077e-60 |
| MsG0180000234.01 | MsG0180000929.01 | 0.809350 | 1.976145e-50 | 1.157613e-47 |
| MsG0180000234.01 | MsG0180001111.01 | -0.811453 | 6.948602e-51 | 4.302973e-48 |
| MsG0180000234.01 | MsG0180001463.01 | 0.813269 | 2.788247e-51 | 1.812401e-48 |
| MsG0180000234.01 | MsG0180001533.01 | 0.837614 | 4.685477e-57 | 6.119712e-54 |
| MsG0180000234.01 | MsG0180002274.01 | 0.807376 | 5.209419e-50 | 2.896935e-47 |
| MsG0180000234.01 | MsG0180003235.01 | 0.840966 | 6.323121e-58 | 9.155316e-55 |
| MsG0180000234.01 | MsG0180003240.01 | 0.843234 | 1.588172e-58 | 2.468818e-55 |
| MsG0180000234.01 | MsG0180003250.01 | 0.809824 | 1.563415e-50 | 9.273724e-48 |
| MsG0180000234.01 | MsG0180003757.01 | -0.819818 | 9.509636e-53 | 7.396213e-50 |
| MsG0180000234.01 | MsG0180004203.01 | 0.820550 | 6.464649e-53 | 5.130989e-50 |
| MsG0180000234.01 | MsG0180004328.01 | 0.819337 | 1.224495e-52 | 9.395283e-50 |
| MsG0180000234.01 | MsG0180004942.01 | 0.824561 | 7.550137e-54 | 6.711715e-51 |
| MsG0180000234.01 | MsG0180005356.01 | 0.857888 | 1.200906e-62 | 3.008971e-59 |
| MsG0180000234.01 | MsG0180005357.01 | 0.829646 | 4.581650e-55 | 4.717967e-52 |
| MsG0180000234.01 | MsG0180005358.01 | 0.845170 | 4.800137e-59 | 7.930190e-56 |
| MsG0180000234.01 | MsG0180005542.01 | 0.824473 | 7.918233e-54 | 7.020465e-51 |
| MsG0180000234.01 | MsG0180005648.01 | 0.869760 | 2.431770e-66 | 9.229580e-63 |
| MsG0180000234.01 | MsG0280006442.01 | 0.817566 | 3.085080e-52 | 2.254604e-49 |
| MsG0180000234.01 | MsG0280006452.01 | -0.822468 | 2.330827e-53 | 1.952588e-50 |
| MsG0180000234.01 | MsG0280007216.01 | 0.853796 | 1.885574e-61 | 4.122880e-58 |
| MsG0180000234.01 | MsG0280007649.01 | -0.817779 | 2.762234e-52 | 2.030541e-49 |
| MsG0180000234.01 | MsG0280007650.01 | -0.816585 | 5.125553e-52 | 3.646495e-49 |
| MsG0180000234.01 | MsG0280007911.01 | 0.806163 | 9.398471e-50 | 5.065818e-47 |
| MsG0180000234.01 | MsG0280008405.01 | 0.851729 | 7.340176e-61 | 1.499708e-57 |
| MsG0180000234.01 | MsG0280008601.01 | 0.806053 | 9.915249e-50 | 5.329229e-47 |
| MsG0180000234.01 | MsG0280009667.01 | 0.824497 | 7.819379e-54 | 6.937605e-51 |
| MsG0180000234.01 | MsG0280010410.01 | 0.805528 | 1.278075e-49 | 6.777183e-47 |
| MsG0180000234.01 | MsG0280010704.01 | -0.807752 | 4.335805e-50 | 2.434777e-47 |
| MsG0180000234.01 | MsG0280010802.01 | 0.854108 | 1.532735e-61 | 3.386642e-58 |
| MsG0180000234.01 | MsG0280011042.01 | 0.804796 | 1.818726e-49 | 9.464871e-47 |
| MsG0180000234.01 | MsG0280011165.01 | 0.819274 | 1.265873e-52 | 9.696425e-50 |
| MsG0180000234.01 | MsG0280011193.01 | 0.806949 | 6.416818e-50 | 3.528867e-47 |
| MsG0180000234.01 | MsG0280011203.01 | 0.811091 | 8.327021e-51 | 5.107564e-48 |
| MsG0180000234.01 | MsG0280011238.01 | 0.805384 | 1.370153e-49 | 7.238628e-47 |
| MsG0180000234.01 | MsG0380011613.01 | 0.856564 | 2.953915e-62 | 7.080483e-59 |
| MsG0180000234.01 | MsG0380011635.01 | 0.831634 | 1.493526e-55 | 1.630191e-52 |
| MsG0180000234.01 | MsG0380012654.01 | 0.837940 | 3.862563e-57 | 5.095672e-54 |
| MsG0180000234.01 | MsG0380013114.01 | -0.811686 | 6.183763e-51 | 3.852749e-48 |
| MsG0180000234.01 | MsG0380013272.01 | 0.808864 | 2.512119e-50 | 1.452454e-47 |
| MsG0180000234.01 | MsG0380013278.01 | 0.807592 | 4.687400e-50 | 2.621141e-47 |
| MsG0180000234.01 | MsG0380013285.01 | 0.810947 | 8.948044e-51 | 5.468072e-48 |
| MsG0180000234.01 | MsG0380013300.01 | 0.868171 | 7.962665e-66 | 2.853052e-62 |
| MsG0180000234.01 | MsG0380013449.01 | 0.816222 | 6.181293e-52 | 4.354264e-49 |
| MsG0180000234.01 | MsG0380013452.01 | 0.835974 | 1.227815e-56 | 1.525760e-53 |
| MsG0180000234.01 | MsG0380015010.01 | 0.802535 | 5.358454e-49 | 2.631266e-46 |
| MsG0180000234.01 | MsG0380015201.01 | -0.800561 | 1.360247e-48 | 6.353406e-46 |
| MsG0180000234.01 | MsG0380015369.01 | 0.821892 | 3.170257e-53 | 2.612568e-50 |
| MsG0180000234.01 | MsG0380015629.01 | 0.811928 | 5.477940e-51 | 3.434974e-48 |
| MsG0180000234.01 | MsG0380015752.01 | -0.805701 | 1.175573e-49 | 6.261977e-47 |
| MsG0180000234.01 | MsG0380015971.01 | -0.800259 | 1.567413e-48 | 7.265178e-46 |
| MsG0180000234.01 | MsG0380016020.01 | 0.832101 | 1.145743e-55 | 1.267836e-52 |
| MsG0180000234.01 | MsG0380016086.01 | 0.844465 | 7.436364e-59 | 1.201503e-55 |
| MsG0180000234.01 | MsG0380016377.01 | 0.805798 | 1.121889e-49 | 5.990638e-47 |
| MsG0180000234.01 | MsG0380016790.01 | -0.809691 | 1.669609e-50 | 9.869127e-48 |
| MsG0180000234.01 | MsG0380016801.01 | 0.801652 | 8.140665e-49 | 3.908582e-46 |
| MsG0180000234.01 | MsG0380016839.01 | 0.816468 | 5.444694e-52 | 3.861037e-49 |
| MsG0180000234.01 | MsG0380016862.01 | 0.848066 | 7.765132e-60 | 1.407769e-56 |
| MsG0180000234.01 | MsG0380017122.01 | 0.842835 | 2.028552e-58 | 3.113943e-55 |
| MsG0180000234.01 | MsG0380017151.01 | 0.865580 | 5.326087e-65 | 1.741658e-61 |
| MsG0180000234.01 | MsG0380017173.01 | 0.808552 | 2.927863e-50 | 1.679096e-47 |
| MsG0180000234.01 | MsG0380017405.01 | -0.809539 | 1.800349e-50 | 1.059877e-47 |
| MsG0180000234.01 | MsG0380017690.01 | 0.836222 | 1.061771e-56 | 1.329637e-53 |
| MsG0180000234.01 | MsG0380017754.01 | 0.853984 | 1.664629e-61 | 3.662817e-58 |
| MsG0180000234.01 | MsG0380017962.01 | -0.800824 | 1.202035e-48 | 5.652008e-46 |
| MsG0180000234.01 | MsG0480018521.01 | 0.803723 | 3.042252e-49 | 1.540019e-46 |
| MsG0180000234.01 | MsG0480018628.01 | -0.819665 | 1.031013e-52 | 7.984135e-50 |
| MsG0180000234.01 | MsG0480018768.01 | 0.800997 | 1.108339e-48 | 5.234838e-46 |
| MsG0180000234.01 | MsG0480019217.01 | 0.810912 | 9.103510e-51 | 5.557646e-48 |
| MsG0180000234.01 | MsG0480020497.01 | 0.829712 | 4.415468e-55 | 4.555806e-52 |
| MsG0180000234.01 | MsG0480020784.01 | 0.823589 | 1.276594e-53 | 1.103920e-50 |
| MsG0180000234.01 | MsG0480021143.01 | -0.821603 | 3.699131e-53 | 3.023237e-50 |
| MsG0180000234.01 | MsG0480021327.01 | -0.812715 | 3.687646e-51 | 2.361826e-48 |
| MsG0180000234.01 | MsG0480021697.01 | 0.817089 | 3.950814e-52 | 2.849801e-49 |
| MsG0180000234.01 | MsG0480022295.01 | -0.815502 | 8.945615e-52 | 6.178697e-49 |
| MsG0180000234.01 | MsG0480022309.01 | 0.816855 | 4.459702e-52 | 3.196314e-49 |
| MsG0180000234.01 | MsG0480022310.01 | 0.803190 | 3.924151e-49 | 1.959467e-46 |
| MsG0180000234.01 | MsG0480022311.01 | 0.831871 | 1.305699e-55 | 1.435397e-52 |
| MsG0180000234.01 | MsG0480022638.01 | 0.834880 | 2.320533e-56 | 2.790421e-53 |
| MsG0180000234.01 | MsG0480022655.01 | 0.831237 | 1.870438e-55 | 2.017541e-52 |
| MsG0180000234.01 | MsG0480023102.01 | 0.853073 | 3.040502e-61 | 6.488953e-58 |
| MsG0180000234.01 | MsG0480023107.01 | 0.839337 | 1.682868e-57 | 2.316896e-54 |
| MsG0180000234.01 | MsG0480023187.01 | -0.829312 | 5.523036e-55 | 5.632969e-52 |
| MsG0180000234.01 | MsG0480023349.01 | 0.851291 | 9.766711e-61 | 1.967487e-57 |
| MsG0180000234.01 | MsG0480023518.01 | 0.831713 | 1.428448e-55 | 1.562998e-52 |
| MsG0180000234.01 | MsG0480023693.01 | 0.818466 | 1.932033e-52 | 1.447435e-49 |
| MsG0180000234.01 | MsG0480023921.01 | 0.881080 | 3.230219e-70 | 1.866086e-66 |
| MsG0180000234.01 | MsG0580024140.01 | -0.817959 | 2.515307e-52 | 1.858098e-49 |
| MsG0180000234.01 | MsG0580024217.01 | 0.810118 | 1.351221e-50 | 8.077099e-48 |
| MsG0180000234.01 | MsG0580024218.01 | 0.821546 | 3.812295e-53 | 3.110963e-50 |
| MsG0180000234.01 | MsG0580024219.01 | 0.808354 | 3.227853e-50 | 1.841647e-47 |
| MsG0180000234.01 | MsG0580024220.01 | 0.838710 | 2.446478e-57 | 3.304411e-54 |
| MsG0180000234.01 | MsG0580024408.01 | 0.868995 | 4.310943e-66 | 1.591551e-62 |
| MsG0180000234.01 | MsG0580024929.01 | 0.806041 | 9.971881e-50 | 5.357990e-47 |
| MsG0180000234.01 | MsG0580024986.01 | 0.829617 | 4.657121e-55 | 4.791366e-52 |
| MsG0180000234.01 | MsG0580024990.01 | 0.861588 | 9.233618e-64 | 2.626087e-60 |
| MsG0180000234.01 | MsG0580025683.01 | 0.831878 | 1.300127e-55 | 1.429584e-52 |
| MsG0180000234.01 | MsG0580028999.01 | 0.814123 | 1.808544e-51 | 1.203170e-48 |
| MsG0180000234.01 | MsG0580029555.01 | 0.840642 | 7.687366e-58 | 1.101954e-54 |
| MsG0180000234.01 | MsG0580029626.01 | 0.832097 | 1.148197e-55 | 1.270442e-52 |
| MsG0180000234.01 | MsG0580030133.01 | 0.892072 | 2.222167e-74 | 1.999510e-70 |
| MsG0180000234.01 | MsG0580030135.01 | 0.880828 | 3.980158e-70 | 2.277742e-66 |
| MsG0180000234.01 | MsG0580030145.01 | 0.824697 | 7.013008e-54 | 6.259171e-51 |
| MsG0180000234.01 | MsG0580030197.01 | -0.800459 | 1.426946e-48 | 6.647608e-46 |
| MsG0180000234.01 | MsG0680030336.01 | 0.865458 | 5.818264e-65 | 1.894402e-61 |
| MsG0180000234.01 | MsG0680030960.01 | 0.806750 | 7.068120e-50 | 3.867118e-47 |
| MsG0180000234.01 | MsG0680031009.01 | 0.831720 | 1.422723e-55 | 1.557110e-52 |
| MsG0180000234.01 | MsG0680031240.01 | 0.802692 | 4.972217e-49 | 2.451466e-46 |
| MsG0180000234.01 | MsG0680031429.01 | 0.839924 | 1.184125e-57 | 1.660062e-54 |
| MsG0180000234.01 | MsG0680034229.01 | -0.820196 | 7.793075e-53 | 6.125396e-50 |
| MsG0180000234.01 | MsG0680034316.01 | 0.802033 | 6.796359e-49 | 3.294986e-46 |
| MsG0180000234.01 | MsG0680034317.01 | 0.832473 | 9.267619e-56 | 1.036928e-52 |
| MsG0180000234.01 | MsG0680035496.01 | 0.817850 | 2.662920e-52 | 1.961327e-49 |
| MsG0180000234.01 | MsG0680035841.01 | 0.811628 | 6.366950e-51 | 3.960762e-48 |
| MsG0180000234.01 | MsG0780035953.01 | 0.821590 | 3.723982e-53 | 3.042435e-50 |
| MsG0180000234.01 | MsG0780036661.01 | 0.871059 | 9.114999e-67 | 3.626537e-63 |
| MsG0180000234.01 | MsG0780036960.01 | 0.806170 | 9.368082e-50 | 5.050327e-47 |
| MsG0180000234.01 | MsG0780037943.01 | 0.816142 | 6.438899e-52 | 4.525857e-49 |
| MsG0180000234.01 | MsG0780038106.01 | -0.809433 | 1.897007e-50 | 1.113643e-47 |
| MsG0180000234.01 | MsG0780038755.01 | 0.831500 | 1.611811e-55 | 1.752347e-52 |
| MsG0180000234.01 | MsG0780038922.01 | 0.853199 | 2.798764e-61 | 5.998937e-58 |
| MsG0180000234.01 | MsG0780038939.01 | 0.810299 | 1.234924e-50 | 7.416396e-48 |
| MsG0180000234.01 | MsG0780038963.01 | 0.839265 | 1.756944e-57 | 2.413313e-54 |
| MsG0180000234.01 | MsG0780039576.01 | 0.832904 | 7.241518e-56 | 8.207284e-53 |
| MsG0180000234.01 | MsG0780039783.01 | 0.830476 | 2.873843e-55 | 3.031050e-52 |
| MsG0180000234.01 | MsG0780039968.01 | 0.856943 | 2.285047e-62 | 5.545655e-59 |
| MsG0180000234.01 | MsG0780039978.01 | 0.823525 | 1.321445e-53 | 1.140621e-50 |
| MsG0180000234.01 | MsG0780040181.01 | 0.869215 | 3.659597e-66 | 1.362394e-62 |
| MsG0180000234.01 | MsG0780040497.01 | 0.800264 | 1.563877e-48 | 7.249785e-46 |
| MsG0180000234.01 | MsG0780040806.01 | 0.821319 | 4.301301e-53 | 3.487703e-50 |
| MsG0180000234.01 | MsG0780041177.01 | 0.805780 | 1.131319e-49 | 6.038396e-47 |
| MsG0180000234.01 | MsG0780041316.01 | 0.817737 | 2.823002e-52 | 2.072864e-49 |
| MsG0180000234.01 | MsG0780041317.01 | 0.802402 | 5.705473e-49 | 2.792397e-46 |
| MsG0180000234.01 | MsG0780041556.01 | 0.867991 | 9.096590e-66 | 3.238043e-62 |
| MsG0180000234.01 | MsG0780041574.01 | 0.835040 | 2.114625e-56 | 2.555040e-53 |
| MsG0180000234.01 | MsG0780041620.01 | -0.818876 | 1.558998e-52 | 1.181209e-49 |
| MsG0180000234.01 | MsG0780041663.01 | 0.806089 | 9.743313e-50 | 5.241549e-47 |
| MsG0180000234.01 | MsG0780041720.01 | -0.808517 | 2.978847e-50 | 1.706767e-47 |
| MsG0180000234.01 | MsG0780041783.01 | -0.805553 | 1.262945e-49 | 6.701184e-47 |
| MsG0180000234.01 | MsG0880041855.01 | -0.809518 | 1.818377e-50 | 1.069904e-47 |
| MsG0180000234.01 | MsG0880042591.01 | 0.811604 | 6.443488e-51 | 4.005802e-48 |
| MsG0180000234.01 | MsG0880042740.01 | 0.873394 | 1.521808e-67 | 6.593756e-64 |
| MsG0180000234.01 | MsG0880042858.01 | -0.815312 | 9.860834e-52 | 6.774966e-49 |
| MsG0180000234.01 | MsG0880042895.01 | -0.809756 | 1.616828e-50 | 9.573798e-48 |
| MsG0180000234.01 | MsG0880043364.01 | 0.818642 | 1.762118e-52 | 1.326391e-49 |
| MsG0180000234.01 | MsG0880043828.01 | 0.838379 | 2.977755e-57 | 3.981229e-54 |
| MsG0180000234.01 | MsG0880045458.01 | 0.801597 | 8.353484e-49 | 4.005129e-46 |
| MsG0180000234.01 | MsG0880045677.01 | 0.846584 | 1.981481e-59 | 3.426731e-56 |
| MsG0180000234.01 | MsG0880046429.01 | 0.874981 | 4.415139e-68 | 2.027967e-64 |
| MsG0180000234.01 | MsG0880046863.01 | 0.815804 | 7.660766e-52 | 5.335119e-49 |
| MsG0180000234.01 | MsG0880046996.01 | 0.841126 | 5.740859e-58 | 8.353154e-55 |
| MsG0180000234.01 | MsG0880047318.01 | -0.800248 | 1.575753e-48 | 7.301737e-46 |
| MsG0180000234.01 | MsG0880047665.01 | 0.863922 | 1.760645e-64 | 5.428866e-61 |
| MsG0180000234.01 | MsG0880047747.01 | 0.866179 | 3.445056e-65 | 1.150508e-61 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180000234.01.T02 | MTR_1g019940 | 73.620 | 163 | 37 | 3 | 45 | 204 | 50 | 209 | 1.69e-74 | 227 |
| MsG0180000234.01.T02 | MTR_1g019940 | 73.913 | 161 | 40 | 2 | 45 | 204 | 169 | 328 | 5.56e-73 | 227 |
| MsG0180000234.01.T02 | MTR_1g019940 | 100.000 | 48 | 0 | 0 | 1 | 48 | 1 | 48 | 6.93e-25 | 101 |
| MsG0180000234.01.T02 | MTR_1g019940 | 75.000 | 156 | 37 | 2 | 50 | 204 | 172 | 326 | 1.79e-72 | 226 |
| MsG0180000234.01.T02 | MTR_1g019940 | 100.000 | 48 | 0 | 0 | 1 | 48 | 1 | 48 | 7.68e-25 | 100 |
| MsG0180000234.01.T02 | MTR_3g101410 | 56.604 | 159 | 58 | 2 | 51 | 204 | 173 | 325 | 2.01e-55 | 182 |
| MsG0180000234.01.T02 | MTR_3g101400 | 57.692 | 156 | 59 | 3 | 52 | 204 | 174 | 325 | 2.16e-54 | 179 |
| MsG0180000234.01.T02 | MTR_5g017680 | 51.429 | 105 | 50 | 1 | 100 | 204 | 214 | 317 | 5.48e-31 | 117 |
| MsG0180000234.01.T02 | MTR_5g017670 | 53.333 | 105 | 46 | 1 | 100 | 204 | 219 | 320 | 6.76e-30 | 114 |
| MsG0180000234.01.T01 | MTR_1g019940 | 73.620 | 163 | 37 | 3 | 45 | 204 | 50 | 209 | 1.69e-74 | 227 |
| MsG0180000234.01.T01 | MTR_1g019940 | 73.913 | 161 | 40 | 2 | 45 | 204 | 169 | 328 | 5.56e-73 | 227 |
| MsG0180000234.01.T01 | MTR_1g019940 | 100.000 | 48 | 0 | 0 | 1 | 48 | 1 | 48 | 6.93e-25 | 101 |
| MsG0180000234.01.T01 | MTR_1g019940 | 75.000 | 156 | 37 | 2 | 50 | 204 | 172 | 326 | 1.79e-72 | 226 |
| MsG0180000234.01.T01 | MTR_1g019940 | 100.000 | 48 | 0 | 0 | 1 | 48 | 1 | 48 | 7.68e-25 | 100 |
| MsG0180000234.01.T01 | MTR_3g101410 | 56.604 | 159 | 58 | 2 | 51 | 204 | 173 | 325 | 2.01e-55 | 182 |
| MsG0180000234.01.T01 | MTR_3g101400 | 57.692 | 156 | 59 | 3 | 52 | 204 | 174 | 325 | 2.16e-54 | 179 |
| MsG0180000234.01.T01 | MTR_5g017680 | 51.429 | 105 | 50 | 1 | 100 | 204 | 214 | 317 | 5.48e-31 | 117 |
| MsG0180000234.01.T01 | MTR_5g017670 | 53.333 | 105 | 46 | 1 | 100 | 204 | 219 | 320 | 6.76e-30 | 114 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180000234.01.T02 | AT2G26560 | 47.647 | 170 | 74 | 4 | 46 | 204 | 159 | 324 | 2.02e-43 | 150 |
| MsG0180000234.01.T02 | AT2G26560 | 86.486 | 37 | 5 | 0 | 12 | 48 | 10 | 46 | 4.50e-14 | 70.5 |
| MsG0180000234.01.T02 | AT4G37060 | 47.857 | 140 | 65 | 2 | 69 | 204 | 189 | 324 | 2.63e-35 | 129 |
| MsG0180000234.01.T02 | AT4G37060 | 47.857 | 140 | 65 | 2 | 69 | 204 | 220 | 355 | 3.26e-35 | 129 |
| MsG0180000234.01.T02 | AT4G37070 | 46.324 | 136 | 73 | 0 | 69 | 204 | 178 | 313 | 4.82e-35 | 127 |
| MsG0180000234.01.T02 | AT4G37070 | 46.324 | 136 | 73 | 0 | 69 | 204 | 189 | 324 | 5.41e-35 | 127 |
| MsG0180000234.01.T02 | AT4G37070 | 46.324 | 136 | 73 | 0 | 69 | 204 | 189 | 324 | 5.41e-35 | 127 |
| MsG0180000234.01.T02 | AT4G37070 | 46.324 | 136 | 73 | 0 | 69 | 204 | 189 | 324 | 8.15e-35 | 128 |
| MsG0180000234.01.T02 | AT4G37050 | 53.846 | 104 | 48 | 0 | 100 | 203 | 244 | 347 | 5.22e-34 | 126 |
| MsG0180000234.01.T02 | AT5G43590 | 45.299 | 117 | 60 | 2 | 100 | 214 | 210 | 324 | 2.81e-27 | 107 |
| MsG0180000234.01.T02 | AT5G43590 | 45.299 | 117 | 60 | 2 | 100 | 214 | 277 | 391 | 4.96e-27 | 107 |
| MsG0180000234.01.T01 | AT2G26560 | 47.647 | 170 | 74 | 4 | 46 | 204 | 159 | 324 | 2.02e-43 | 150 |
| MsG0180000234.01.T01 | AT2G26560 | 86.486 | 37 | 5 | 0 | 12 | 48 | 10 | 46 | 4.50e-14 | 70.5 |
| MsG0180000234.01.T01 | AT4G37060 | 47.857 | 140 | 65 | 2 | 69 | 204 | 189 | 324 | 2.63e-35 | 129 |
| MsG0180000234.01.T01 | AT4G37060 | 47.857 | 140 | 65 | 2 | 69 | 204 | 220 | 355 | 3.26e-35 | 129 |
| MsG0180000234.01.T01 | AT4G37070 | 46.324 | 136 | 73 | 0 | 69 | 204 | 178 | 313 | 4.82e-35 | 127 |
| MsG0180000234.01.T01 | AT4G37070 | 46.324 | 136 | 73 | 0 | 69 | 204 | 189 | 324 | 5.41e-35 | 127 |
| MsG0180000234.01.T01 | AT4G37070 | 46.324 | 136 | 73 | 0 | 69 | 204 | 189 | 324 | 5.41e-35 | 127 |
| MsG0180000234.01.T01 | AT4G37070 | 46.324 | 136 | 73 | 0 | 69 | 204 | 189 | 324 | 8.15e-35 | 128 |
| MsG0180000234.01.T01 | AT4G37050 | 53.846 | 104 | 48 | 0 | 100 | 203 | 244 | 347 | 5.22e-34 | 126 |
| MsG0180000234.01.T01 | AT5G43590 | 45.299 | 117 | 60 | 2 | 100 | 214 | 210 | 324 | 2.81e-27 | 107 |
| MsG0180000234.01.T01 | AT5G43590 | 45.299 | 117 | 60 | 2 | 100 | 214 | 277 | 391 | 4.96e-27 | 107 |
Find 7 sgRNAs with CRISPR-Local
Find 204 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTTGCCTCTACTTGTGTGT+GGG | 0.432968 | 1:-3229324 | None:intergenic |
| AAATAAAACATTTAAATACA+TGG | 0.468306 | 1:-3229570 | None:intergenic |
| TTCTTGCCTCTACTTGTGTG+TGG | 0.506302 | 1:-3229325 | None:intergenic |
| CTTGCCTCTACTTGTGTGTG+GGG | 0.564230 | 1:-3229323 | None:intergenic |
| TGAATCATGAAACTAGATGC+GGG | 0.594949 | 1:-3229350 | None:intergenic |
| AGATCCCCACACACAAGTAG+AGG | 0.617675 | 1:+3229319 | MsG0180000234.01.T01:three_prime_UTR |
| ATGAATCATGAAACTAGATG+CGG | 0.681359 | 1:-3229351 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAAAAAAAAAAAAA+AGG | - | Chr1:3228848-3228867 | None:intergenic | 0.0% |
| !!! | TTTTTTTTTTTTTTTTTTTA+TGG | + | Chr1:3228856-3228875 | MsG0180000234.01.T01:intron | 0.0% |
| !! | AAATAAAACATTTAAATACA+TGG | - | Chr1:3229573-3229592 | None:intergenic | 10.0% |
| !! | TTTCAAATAATAAAGTAATA+TGG | - | Chr1:3226790-3226809 | None:intergenic | 10.0% |
| !!! | AAAAAAAAAAAAAAAGGTAT+AGG | - | Chr1:3228843-3228862 | None:intergenic | 10.0% |
| !!! | AGACAAATAATATATAATTT+TGG | - | Chr1:3227634-3227653 | None:intergenic | 10.0% |
| !!! | ATCTAAAAATAAGTTTTTAT+TGG | + | Chr1:3227124-3227143 | MsG0180000234.01.T01:intron | 10.0% |
| !!! | TTTTTTTGAGTAAATATTAA+TGG | - | Chr1:3225824-3225843 | None:intergenic | 10.0% |
| !! | ATTTGATTATAGTAGTTTAT+AGG | + | Chr1:3227969-3227988 | MsG0180000234.01.T01:intron | 15.0% |
| !! | GCACAATTATAATATAATTT+GGG | - | Chr1:3229205-3229224 | None:intergenic | 15.0% |
| !! | TATTCAAAAATAAAAGCAAA+GGG | - | Chr1:3228100-3228119 | None:intergenic | 15.0% |
| !! | TGATGTACAATATATATTAA+TGG | - | Chr1:3228916-3228935 | None:intergenic | 15.0% |
| !! | TGCACAATTATAATATAATT+TGG | - | Chr1:3229206-3229225 | None:intergenic | 15.0% |
| !! | TTACATATAAAAACTTTCAT+AGG | - | Chr1:3226273-3226292 | None:intergenic | 15.0% |
| !! | TTATTCAAAAATAAAAGCAA+AGG | - | Chr1:3228101-3228120 | None:intergenic | 15.0% |
| !!! | TAATTTATGTTTATTTTTCG+TGG | - | Chr1:3226606-3226625 | None:intergenic | 15.0% |
| !!! | TTATTTTCTTTTTGCATAAA+TGG | + | Chr1:3226164-3226183 | MsG0180000234.01.T01:intron | 15.0% |
| !!! | TTCATTTTATCTATATGTTT+AGG | - | Chr1:3226516-3226535 | None:intergenic | 15.0% |
| !!! | TTTGAAATAAAAACTATTGT+TGG | - | Chr1:3227669-3227688 | None:intergenic | 15.0% |
| !! | AATGTATATATGAATGCAAT+TGG | - | Chr1:3228015-3228034 | None:intergenic | 20.0% |
| !! | AATTGGTATTTATATATCGT+TGG | - | Chr1:3227998-3228017 | None:intergenic | 20.0% |
| !! | ACTTCTATTGTAATTATTTG+AGG | + | Chr1:3227062-3227081 | MsG0180000234.01.T01:intron | 20.0% |
| !! | AGTATGGTTTATATATTTCA+GGG | - | Chr1:3225776-3225795 | None:intergenic | 20.0% |
| !! | ATATTAATTACCTATGTTGT+GGG | - | Chr1:3227012-3227031 | None:intergenic | 20.0% |
| !! | ATTAAGATTATTAGTAGAGA+TGG | + | Chr1:3229164-3229183 | MsG0180000234.01.T01:intron | 20.0% |
| !! | ATTCAAAAATAAAAGCAAAG+GGG | - | Chr1:3228099-3228118 | None:intergenic | 20.0% |
| !! | ATTTATTATGCAAACTATCT+TGG | + | Chr1:3226335-3226354 | MsG0180000234.01.T01:intron | 20.0% |
| !! | CAATTATAATATAATTTGGG+TGG | - | Chr1:3229202-3229221 | None:intergenic | 20.0% |
| !! | GAAATTACATAAAATTTCGA+TGG | + | Chr1:3225853-3225872 | MsG0180000234.01.T01:intron | 20.0% |
| !! | TATATTAATTACCTATGTTG+TGG | - | Chr1:3227013-3227032 | None:intergenic | 20.0% |
| !! | TATTCTATTCTAATACATTC+AGG | + | Chr1:3229254-3229273 | MsG0180000234.01.T01:intron | 20.0% |
| !! | TGAGTAAAAACATCAATTAA+GGG | - | Chr1:3228730-3228749 | None:intergenic | 20.0% |
| !! | TTCATATATAATATACCTGA+AGG | - | Chr1:3226012-3226031 | None:intergenic | 20.0% |
| !! | TTGAGTAAAAACATCAATTA+AGG | - | Chr1:3228731-3228750 | None:intergenic | 20.0% |
| !! | TTTATAAATTCTCACCAATT+TGG | - | Chr1:3229059-3229078 | None:intergenic | 20.0% |
| !! | TTTCAAATTTGTATTATGCA+AGG | + | Chr1:3228054-3228073 | MsG0180000234.01.T01:intron | 20.0% |
| !!! | AAAAAAAAGTGTCCTTTTTT+AGG | + | Chr1:3226400-3226419 | MsG0180000234.01.T01:intron | 20.0% |
| !!! | AAAAAAAGTGTCCTTTTTTA+GGG | + | Chr1:3226401-3226420 | MsG0180000234.01.T01:intron | 20.0% |
| !!! | GAAAGTTTTTATATGTAAGT+TGG | + | Chr1:3226275-3226294 | MsG0180000234.01.T01:intron | 20.0% |
| !!! | GATTGAAATTTTATTTTGAG+TGG | + | Chr1:3227930-3227949 | MsG0180000234.01.T01:intron | 20.0% |
| !!! | GGTAAAACTTTTTACATTAA+CGG | + | Chr1:3228323-3228342 | MsG0180000234.01.T01:intron | 20.0% |
| !!! | TATGTATTTTAAATCCACAT+TGG | - | Chr1:3227412-3227431 | None:intergenic | 20.0% |
| !!! | TTTGTTATTTTTTATGATCC+AGG | + | Chr1:3228507-3228526 | MsG0180000234.01.T01:intron | 20.0% |
| !!! | TTTTTTTTGACAATGATACA+CGG | - | Chr1:3229541-3229560 | None:intergenic | 20.0% |
| !!! | TTTTTTTTTGAGAGAATACA+CGG | - | Chr1:3229506-3229525 | None:intergenic | 20.0% |
| ! | AATTAAAACCTGATAAGATG+AGG | - | Chr1:3227340-3227359 | None:intergenic | 25.0% |
| ! | ACAAAAAATTCCCCTAAAAA+AGG | - | Chr1:3226415-3226434 | None:intergenic | 25.0% |
| ! | AGATTTCACAGTTTATACAA+CGG | + | Chr1:3226474-3226493 | MsG0180000234.01.T01:intron | 25.0% |
| ! | ATTACATAAAATTTCGATGG+AGG | + | Chr1:3225856-3225875 | MsG0180000234.01.T01:intron | 25.0% |
| ! | ATTTGATTATTTGCACATAC+CGG | - | Chr1:3227892-3227911 | None:intergenic | 25.0% |
| ! | GAGTATGGTTTATATATTTC+AGG | - | Chr1:3225777-3225796 | None:intergenic | 25.0% |
| ! | GTGAGAATTTATAAAGAAAC+CGG | + | Chr1:3229064-3229083 | MsG0180000234.01.T01:intron | 25.0% |
| ! | TAACAAAATCAACAAAATGC+AGG | + | Chr1:3228967-3228986 | MsG0180000234.01.T01:intron | 25.0% |
| ! | TAGCAAAAGAAATTTAGAGA+TGG | + | Chr1:3226624-3226643 | MsG0180000234.01.T01:intron | 25.0% |
| ! | TGAAGAAAGAAACTCATATA+AGG | + | Chr1:3228419-3228438 | MsG0180000234.01.T01:intron | 25.0% |
| ! | TTAAAATTCGAACTCTAAGT+AGG | - | Chr1:3226064-3226083 | None:intergenic | 25.0% |
| ! | TTACATAAAATTTCGATGGA+GGG | + | Chr1:3225857-3225876 | MsG0180000234.01.T01:intron | 25.0% |
| !! | GTAAAAAGTTTTACCATATC+AGG | - | Chr1:3228318-3228337 | None:intergenic | 25.0% |
| !! | TAAGATTACATTATTTTCGC+TGG | - | Chr1:3229623-3229642 | None:intergenic | 25.0% |
| !! | TATGTTGTGGGAAAATTTTA+GGG | - | Chr1:3227000-3227019 | None:intergenic | 25.0% |
| !!! | AAAAAAGTGTCCTTTTTTAG+GGG | + | Chr1:3226402-3226421 | MsG0180000234.01.T01:intron | 25.0% |
| !!! | AAGGTATTTTCCATCATATT+TGG | - | Chr1:3227214-3227233 | None:intergenic | 25.0% |
| !!! | TAACCATTCTTAGTATTGAT+GGG | + | Chr1:3225933-3225952 | MsG0180000234.01.T01:CDS | 25.0% |
| !!! | TAATTTTGGTCTTAAAACTG+TGG | - | Chr1:3227620-3227639 | None:intergenic | 25.0% |
| !!! | TGAAAGTACCTTGTATATAT+TGG | + | Chr1:3226028-3226047 | MsG0180000234.01.T01:intron | 25.0% |
| !!! | TGAGGAATTCAAGTTTTTTA+TGG | + | Chr1:3227095-3227114 | MsG0180000234.01.T01:intron | 25.0% |
| AAAGTTAGCATCAAAACAAG+GGG | - | Chr1:3227740-3227759 | None:intergenic | 30.0% | |
| AAGTTGTTAGAGAGAAACTT+TGG | + | Chr1:3227238-3227257 | MsG0180000234.01.T01:intron | 30.0% | |
| ACTAGATCCCATTACATTAT+GGG | + | Chr1:3228136-3228155 | MsG0180000234.01.T01:intron | 30.0% | |
| AGTTAGTTGAAGAATCGTTT+GGG | + | Chr1:3227527-3227546 | MsG0180000234.01.T01:intron | 30.0% | |
| ATGAATCATGAAACTAGATG+CGG | - | Chr1:3229354-3229373 | None:intergenic | 30.0% | |
| CAAAAATACTTTCACAAGAG+AGG | + | Chr1:3229281-3229300 | MsG0180000234.01.T01:CDS | 30.0% | |
| CAAAGTCTTGATGTAAATGT+GGG | - | Chr1:3227303-3227322 | None:intergenic | 30.0% | |
| CTCCAAGTCAATTTAGAAAA+TGG | + | Chr1:3229088-3229107 | MsG0180000234.01.T01:intron | 30.0% | |
| GAAAGTTAGCATCAAAACAA+GGG | - | Chr1:3227741-3227760 | None:intergenic | 30.0% | |
| GATAAGATGAGGAAAATGAT+TGG | - | Chr1:3227329-3227348 | None:intergenic | 30.0% | |
| TAATGGTGTGATGAAAACAA+AGG | - | Chr1:3225807-3225826 | None:intergenic | 30.0% | |
| TACTAGATCCCATTACATTA+TGG | + | Chr1:3228135-3228154 | MsG0180000234.01.T01:intron | 30.0% | |
| TAGTTAGTTGAAGAATCGTT+TGG | + | Chr1:3227526-3227545 | MsG0180000234.01.T01:intron | 30.0% | |
| TGAAAGTTAGCATCAAAACA+AGG | - | Chr1:3227742-3227761 | None:intergenic | 30.0% | |
| TGATAATTACCTTCGAATTC+AGG | + | Chr1:3228810-3228829 | MsG0180000234.01.T01:CDS | 30.0% | |
| TTCTCAGACAACACTTAATA+GGG | + | Chr1:3226560-3226579 | MsG0180000234.01.T01:intron | 30.0% | |
| TTGAAGAAACTATGCCAAAT+TGG | + | Chr1:3229042-3229061 | MsG0180000234.01.T01:intron | 30.0% | |
| TTTCTCAGACAACACTTAAT+AGG | + | Chr1:3226559-3226578 | MsG0180000234.01.T01:intron | 30.0% | |
| ! | ATCATTTTCCTCATCTTATC+AGG | + | Chr1:3227329-3227348 | MsG0180000234.01.T01:intron | 30.0% |
| ! | ATTTGAGGTGTATATACTTG+AGG | + | Chr1:3227077-3227096 | MsG0180000234.01.T01:intron | 30.0% |
| ! | CGTTTTCTGATCATTTCAAT+AGG | + | Chr1:3228613-3228632 | MsG0180000234.01.T01:CDS | 30.0% |
| ! | CTAAAATTTTCCCACAACAT+AGG | + | Chr1:3226999-3227018 | MsG0180000234.01.T01:intron | 30.0% |
| ! | CTATGTTGTGGGAAAATTTT+AGG | - | Chr1:3227001-3227020 | None:intergenic | 30.0% |
| ! | CTGATCTTTATTTGTGAAGT+TGG | - | Chr1:3227817-3227836 | None:intergenic | 30.0% |
| ! | GACCATTTTCTAAATTGACT+TGG | - | Chr1:3229093-3229112 | None:intergenic | 30.0% |
| ! | GTAACCATTCTTAGTATTGA+TGG | + | Chr1:3225932-3225951 | MsG0180000234.01.T01:CDS | 30.0% |
| ! | TACCTTGTATATATTGGCTA+TGG | + | Chr1:3226034-3226053 | MsG0180000234.01.T01:intron | 30.0% |
| ! | TCTTTTGTTCTCCTCAAAAA+AGG | + | Chr1:3226434-3226453 | MsG0180000234.01.T01:intron | 30.0% |
| !! | AACCATTCTTAGTATTGATG+GGG | + | Chr1:3225934-3225953 | MsG0180000234.01.T01:CDS | 30.0% |
| !! | AAGTGGACGATTATTTTATC+TGG | - | Chr1:3226936-3226955 | None:intergenic | 30.0% |
| !! | GATGTTTTTACTCAATCAAG+TGG | + | Chr1:3228736-3228755 | MsG0180000234.01.T01:CDS | 30.0% |
| !! | GTAAGTTGGTTCCATAATAA+TGG | + | Chr1:3226289-3226308 | MsG0180000234.01.T01:intron | 30.0% |
| !! | TCAATTGTTTTGTAGAGACT+TGG | + | Chr1:3227148-3227167 | MsG0180000234.01.T01:intron | 30.0% |
| !! | TTATGGGGCACTTTTTATTT+TGG | + | Chr1:3228152-3228171 | MsG0180000234.01.T01:intron | 30.0% |
| !! | TTATGTTTATTTTTCGTGGC+TGG | - | Chr1:3226602-3226621 | None:intergenic | 30.0% |
| !!! | AAATTTTAGGGCAATGTTCA+AGG | - | Chr1:3226988-3227007 | None:intergenic | 30.0% |
| !!! | ACAAAAGACAACCTTTTTTG+AGG | - | Chr1:3226448-3226467 | None:intergenic | 30.0% |
| !!! | GATTATTTTGATGTGATCTC+AGG | + | Chr1:3226871-3226890 | MsG0180000234.01.T01:intron | 30.0% |
| AAAGCAAAGGGGTTTAATCA+TGG | - | Chr1:3228088-3228107 | None:intergenic | 35.0% | |
| AACAAAGGCTGTATAGAGTA+TGG | - | Chr1:3225792-3225811 | None:intergenic | 35.0% | |
| AAGAAGAGAGTTCATCTCAT+TGG | + | Chr1:3227845-3227864 | MsG0180000234.01.T01:CDS | 35.0% | |
| AGAAGAGAGTTCATCTCATT+GGG | + | Chr1:3227846-3227865 | MsG0180000234.01.T01:CDS | 35.0% | |
| AGCCATAGCCAATATATACA+AGG | - | Chr1:3226039-3226058 | None:intergenic | 35.0% | |
| AGGAATTCAATAATTGCAGC+AGG | - | Chr1:3225980-3225999 | None:intergenic | 35.0% | |
| ATATCTTTGGCAGCAAAAAG+TGG | - | Chr1:3226953-3226972 | None:intergenic | 35.0% | |
| CAAAGGTAATGAGATCTCTT+GGG | + | Chr1:3227185-3227204 | MsG0180000234.01.T01:intron | 35.0% | |
| CACAAATAAAGATCAGAAGC+TGG | + | Chr1:3227821-3227840 | MsG0180000234.01.T01:CDS | 35.0% | |
| CCAAATGGGGATTATTAGAT+TGG | + | Chr1:3228683-3228702 | MsG0180000234.01.T01:CDS | 35.0% | |
| CCAATCTAATAATCCCCATT+TGG | - | Chr1:3228686-3228705 | None:intergenic | 35.0% | |
| CTAGATCCCATTACATTATG+GGG | + | Chr1:3228137-3228156 | MsG0180000234.01.T01:intron | 35.0% | |
| GCAAAGTCTTGATGTAAATG+TGG | - | Chr1:3227304-3227323 | None:intergenic | 35.0% | |
| GGAATTCAATAATTGCAGCA+GGG | - | Chr1:3225979-3225998 | None:intergenic | 35.0% | |
| GTAAAAGGGCTTGATATCTT+TGG | - | Chr1:3226966-3226985 | None:intergenic | 35.0% | |
| GTTCCATAATAATGGCAGTA+GGG | + | Chr1:3226297-3226316 | MsG0180000234.01.T01:intron | 35.0% | |
| TAAATGTGGGAACACAATGT+TGG | - | Chr1:3227290-3227309 | None:intergenic | 35.0% | |
| TACTCAATCAAGTGGTGATA+TGG | + | Chr1:3228744-3228763 | MsG0180000234.01.T01:CDS | 35.0% | |
| TATGGTAGTAGAGTCGAATT+CGG | + | Chr1:3228874-3228893 | MsG0180000234.01.T01:intron | 35.0% | |
| TCTCTCTAACAACTTGATGA+AGG | - | Chr1:3227233-3227252 | None:intergenic | 35.0% | |
| TGAATCATGAAACTAGATGC+GGG | - | Chr1:3229353-3229372 | None:intergenic | 35.0% | |
| TGATCATTTCAATAGGCACT+GGG | + | Chr1:3228620-3228639 | MsG0180000234.01.T01:CDS | 35.0% | |
| TTACCAAGTTCCCATAAGTA+GGG | - | Chr1:3225916-3225935 | None:intergenic | 35.0% | |
| TTATGCAAACTATCTTGGTG+AGG | + | Chr1:3226340-3226359 | MsG0180000234.01.T01:intron | 35.0% | |
| TTCTTCAGTAGACATTGCTA+CGG | + | Chr1:3229011-3229030 | MsG0180000234.01.T01:intron | 35.0% | |
| TTTATTTGTGAAGTTGGCGA+GGG | - | Chr1:3227811-3227830 | None:intergenic | 35.0% | |
| ! | AAAGTGCCCCATAATGTAAT+GGG | - | Chr1:3228146-3228165 | None:intergenic | 35.0% |
| ! | CAAAGATAGAGTGTTTGAGA+TGG | - | Chr1:3227591-3227610 | None:intergenic | 35.0% |
| ! | CAAGTGTTATTGAACTCAAG+TGG | + | Chr1:3227495-3227514 | MsG0180000234.01.T01:intron | 35.0% |
| ! | CTGCTTTGTTACTTCATTCA+TGG | - | Chr1:3228542-3228561 | None:intergenic | 35.0% |
| ! | GGAATTTTACCTGAATTCGA+AGG | - | Chr1:3228822-3228841 | None:intergenic | 35.0% |
| ! | TTAGATTGGCTAACACATAG+TGG | + | Chr1:3228697-3228716 | MsG0180000234.01.T01:CDS | 35.0% |
| !! | AAAAGTGCCCCATAATGTAA+TGG | - | Chr1:3228147-3228166 | None:intergenic | 35.0% |
| !! | ACCATTCTTAGTATTGATGG+GGG | + | Chr1:3225935-3225954 | MsG0180000234.01.T01:CDS | 35.0% |
| !! | TTCTAAATTGACTTGGAGAC+CGG | - | Chr1:3229086-3229105 | None:intergenic | 35.0% |
| !!! | AGTGCAGCTACTTTTATGAA+AGG | + | Chr1:3226365-3226384 | MsG0180000234.01.T01:intron | 35.0% |
| AAATTCAGCCCCCTACTTAT+GGG | + | Chr1:3225903-3225922 | MsG0180000234.01.T01:CDS | 40.0% | |
| AAGATTGTGTGTGCCTGATA+TGG | + | Chr1:3228302-3228321 | MsG0180000234.01.T01:intron | 40.0% | |
| AGAAAACGACCATATTCCAG+AGG | - | Chr1:3228601-3228620 | None:intergenic | 40.0% | |
| AGGGCAATGTTCAAGGTAAA+AGG | - | Chr1:3226981-3227000 | None:intergenic | 40.0% | |
| ATACCTGAAGGTGAGATTCA+AGG | - | Chr1:3226000-3226019 | None:intergenic | 40.0% | |
| ATTCCTTGAATCTCACCTTC+AGG | + | Chr1:3225994-3226013 | MsG0180000234.01.T01:CDS | 40.0% | |
| CATCCCTACTGCCATTATTA+TGG | - | Chr1:3226303-3226322 | None:intergenic | 40.0% | |
| CTGATCATTTCAATAGGCAC+TGG | + | Chr1:3228619-3228638 | MsG0180000234.01.T01:CDS | 40.0% | |
| GCAAAGGTAATGAGATCTCT+TGG | + | Chr1:3227184-3227203 | MsG0180000234.01.T01:intron | 40.0% | |
| GGCTTGATTGGAAAGAAATC+AGG | - | Chr1:3228580-3228599 | None:intergenic | 40.0% | |
| GGGCAATGTTCAAGGTAAAA+GGG | - | Chr1:3226980-3226999 | None:intergenic | 40.0% | |
| GGTTCCATAATAATGGCAGT+AGG | + | Chr1:3226296-3226315 | MsG0180000234.01.T01:intron | 40.0% | |
| GTTACCAAGTTCCCATAAGT+AGG | - | Chr1:3225917-3225936 | None:intergenic | 40.0% | |
| TACCAAGTTCCCATAAGTAG+GGG | - | Chr1:3225915-3225934 | None:intergenic | 40.0% | |
| TAGATATAGCGCAAGCTAAG+TGG | - | Chr1:3228940-3228959 | None:intergenic | 40.0% | |
| TAGATGGAATGTTGCCAATG+TGG | + | Chr1:3227395-3227414 | MsG0180000234.01.T01:intron | 40.0% | |
| TATTAATGGCGTAACCTCTG+AGG | - | Chr1:3228902-3228921 | None:intergenic | 40.0% | |
| TCAAAACAAGGGGATCTATG+AGG | - | Chr1:3227730-3227749 | None:intergenic | 40.0% | |
| TCCCCCATCAATACTAAGAA+TGG | - | Chr1:3225939-3225958 | None:intergenic | 40.0% | |
| TCTTGGGACACCAAATATGA+TGG | + | Chr1:3227201-3227220 | MsG0180000234.01.T01:intron | 40.0% | |
| TTTCTTTCCAATCAAGCCTC+TGG | + | Chr1:3228582-3228601 | MsG0180000234.01.T01:CDS | 40.0% | |
| ! | CTTTATTTGTGAAGTTGGCG+AGG | - | Chr1:3227812-3227831 | None:intergenic | 40.0% |
| ! | TCATTTTGAGCCACTAACAC+CGG | + | Chr1:3229111-3229130 | MsG0180000234.01.T01:intron | 40.0% |
| ! | TGTGATCTCAGGAAAAGTAC+AGG | + | Chr1:3226882-3226901 | MsG0180000234.01.T01:intron | 40.0% |
| ! | TTTATCTGGAGCAGCTAACA+TGG | - | Chr1:3226922-3226941 | None:intergenic | 40.0% |
| !! | AGCATCTTCATTGGTTTCTC+CGG | - | Chr1:3229133-3229152 | None:intergenic | 40.0% |
| !! | ATTCTTAGTATTGATGGGGG+AGG | + | Chr1:3225938-3225957 | MsG0180000234.01.T01:CDS | 40.0% |
| !! | TATTGATGGGGGAGGTATTA+GGG | + | Chr1:3225946-3225965 | MsG0180000234.01.T01:CDS | 40.0% |
| ACCAAGTTCCCATAAGTAGG+GGG | - | Chr1:3225914-3225933 | None:intergenic | 45.0% | |
| AGAGAGTTCATCTCATTGGG+TGG | + | Chr1:3227849-3227868 | MsG0180000234.01.T01:CDS | 45.0% | |
| AGTTGGATGGTGAAGATGCA+AGG | + | Chr1:3226842-3226861 | MsG0180000234.01.T01:intron | 45.0% | |
| CAAATTCAGCCCCCTACTTA+TGG | + | Chr1:3225902-3225921 | MsG0180000234.01.T01:CDS | 45.0% | |
| CAATAATTGCAGCAGGGATG+AGG | - | Chr1:3225973-3225992 | None:intergenic | 45.0% | |
| CACTGGGACTGCAAAAAATG+AGG | + | Chr1:3228636-3228655 | MsG0180000234.01.T01:CDS | 45.0% | |
| CATTCATGGCAACTAAAGCC+TGG | - | Chr1:3228528-3228547 | None:intergenic | 45.0% | |
| CCAATGAAGATGCTCTCAAG+AGG | + | Chr1:3229139-3229158 | MsG0180000234.01.T01:intron | 45.0% | |
| CCATATTCCAGAGGCTTGAT+TGG | - | Chr1:3228592-3228611 | None:intergenic | 45.0% | |
| GGACTGCAAAAAATGAGGAG+AGG | + | Chr1:3228641-3228660 | MsG0180000234.01.T01:CDS | 45.0% | |
| GGTGTTTCGCGCAAATAATC+CGG | + | Chr1:3227870-3227889 | MsG0180000234.01.T01:CDS | 45.0% | |
| TCTTGCCTCTACTTGTGTGT+GGG | - | Chr1:3229327-3229346 | None:intergenic | 45.0% | |
| TGCACAAATGGCAGCCAAAT+GGG | + | Chr1:3228669-3228688 | MsG0180000234.01.T01:CDS | 45.0% | |
| TGCATCTTCACCATCCAACT+CGG | - | Chr1:3226842-3226861 | None:intergenic | 45.0% | |
| TGGTGCGACACTATTAGCAA+AGG | + | Chr1:3227168-3227187 | MsG0180000234.01.T01:intron | 45.0% | |
| TTCAGTAGACATTGCTACGG+AGG | + | Chr1:3229014-3229033 | MsG0180000234.01.T01:intron | 45.0% | |
| TTCTTGCCTCTACTTGTGTG+TGG | - | Chr1:3229328-3229347 | None:intergenic | 45.0% | |
| ! | ATTGGTTTCTCCGGTGTTAG+TGG | - | Chr1:3229124-3229143 | None:intergenic | 45.0% |
| ! | CGTGGCTGGTTATTAGTAGT+TGG | - | Chr1:3226588-3226607 | None:intergenic | 45.0% |
| ! | GATCTCAGGAAAAGTACAGG+AGG | + | Chr1:3226885-3226904 | MsG0180000234.01.T01:intron | 45.0% |
| !! | ATTGATGGGGGAGGTATTAG+GGG | + | Chr1:3225947-3225966 | MsG0180000234.01.T01:CDS | 45.0% |
| !! | CCAATCAAGCCTCTGGAATA+TGG | + | Chr1:3228589-3228608 | MsG0180000234.01.T01:CDS | 45.0% |
| !! | CCTCTTGAGAGCATCTTCAT+TGG | - | Chr1:3229142-3229161 | None:intergenic | 45.0% |
| !! | GTATTGATGGGGGAGGTATT+AGG | + | Chr1:3225945-3225964 | MsG0180000234.01.T01:CDS | 45.0% |
| !! | ATTATTTAATTAATAATTGA+AGG | + | Chr1:3228475-3228494 | MsG0180000234.01.T01:intron | 5.0% |
| !!! | TTAATTTTTTTATATATAGA+TGG | + | Chr1:3227379-3227398 | MsG0180000234.01.T01:intron | 5.0% |
| AGATCCCCACACACAAGTAG+AGG | + | Chr1:3229319-3229338 | MsG0180000234.01.T01:three_prime_UTR | 50.0% | |
| AGTCGAATTCGGTACCTCAG+AGG | + | Chr1:3228885-3228904 | MsG0180000234.01.T01:intron | 50.0% | |
| AGTTGATCTGTGTGCCGAGT+TGG | + | Chr1:3226825-3226844 | MsG0180000234.01.T01:intron | 50.0% | |
| AGTTGGCGAGGGAGATAAGT+AGG | - | Chr1:3227800-3227819 | None:intergenic | 50.0% | |
| CTGCACAAATGGCAGCCAAA+TGG | + | Chr1:3228668-3228687 | MsG0180000234.01.T01:CDS | 50.0% | |
| CTTGCCTCTACTTGTGTGTG+GGG | - | Chr1:3229326-3229345 | None:intergenic | 50.0% | |
| GCACAAATGGCAGCCAAATG+GGG | + | Chr1:3228670-3228689 | MsG0180000234.01.T01:CDS | 50.0% | |
| GGAGAGGTTCACTGCACAAA+TGG | + | Chr1:3228657-3228676 | MsG0180000234.01.T01:CDS | 50.0% | |
| GCCCCCTACTTATGGGAACT+TGG | + | Chr1:3225910-3225929 | MsG0180000234.01.T01:CDS | 55.0% | |
| ! | GATCTGTGTGCCGAGTTGGA+TGG | + | Chr1:3226829-3226848 | MsG0180000234.01.T01:intron | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr1 | gene | 3225714 | 3229646 | 3225714 | ID=MsG0180000234.01;Name=MsG0180000234.01 |
| Chr1 | mRNA | 3225714 | 3229646 | 3225714 | ID=MsG0180000234.01.T01;Parent=MsG0180000234.01;Name=MsG0180000234.01.T01;_AED=0.41;_eAED=0.41;_QI=158|0.5|1|1|0.75|0.6|5|300|215 |
| Chr1 | exon | 3229542 | 3229646 | 3229542 | ID=MsG0180000234.01.T01:exon:6212;Parent=MsG0180000234.01.T01 |
| Chr1 | exon | 3229276 | 3229506 | 3229276 | ID=MsG0180000234.01.T01:exon:6211;Parent=MsG0180000234.01.T01 |
| Chr1 | five_prime_UTR | 3225714 | 3225871 | 3225714 | ID=MsG0180000234.01.T01:five_prime_utr;Parent=MsG0180000234.01.T01 |
| Chr1 | CDS | 3225872 | 3226015 | 3225872 | ID=MsG0180000234.01.T01:cds;Parent=MsG0180000234.01.T01 |
| Chr1 | CDS | 3227727 | 3227891 | 3227727 | ID=MsG0180000234.01.T01:cds;Parent=MsG0180000234.01.T01 |
| Chr1 | CDS | 3228529 | 3228831 | 3228529 | ID=MsG0180000234.01.T01:cds;Parent=MsG0180000234.01.T01 |
| Chr1 | CDS | 3229276 | 3229311 | 3229276 | ID=MsG0180000234.01.T01:cds;Parent=MsG0180000234.01.T01 |
| Chr1 | three_prime_UTR | 3229312 | 3229506 | 3229312 | ID=MsG0180000234.01.T01:three_prime_utr;Parent=MsG0180000234.01.T01 |
| Chr1 | three_prime_UTR | 3229542 | 3229646 | 3229542 | ID=MsG0180000234.01.T01:three_prime_utr;Parent=MsG0180000234.01.T01 |
| Chr1 | mRNA | 3225714 | 3229515 | 3225714 | ID=MsG0180000234.01.T02;Parent=MsG0180000234.01;Name=MsG0180000234.01.T02;_AED=0.42;_eAED=0.42;_QI=158|0.33|1|1|1|1|4|204|215 |
| Chr1 | exon | 3229276 | 3229515 | 3229276 | ID=MsG0180000234.01.T02:exon:6213;Parent=MsG0180000234.01.T02 |
| Chr1 | five_prime_UTR | 3225714 | 3225871 | 3225714 | ID=MsG0180000234.01.T02:five_prime_utr;Parent=MsG0180000234.01.T02 |
| Chr1 | CDS | 3225872 | 3226015 | 3225872 | ID=MsG0180000234.01.T02:cds;Parent=MsG0180000234.01.T02 |
| Chr1 | CDS | 3227727 | 3227891 | 3227727 | ID=MsG0180000234.01.T02:cds;Parent=MsG0180000234.01.T02 |
| Chr1 | CDS | 3228529 | 3228831 | 3228529 | ID=MsG0180000234.01.T02:cds;Parent=MsG0180000234.01.T02 |
| Chr1 | CDS | 3229276 | 3229311 | 3229276 | ID=MsG0180000234.01.T02:cds;Parent=MsG0180000234.01.T02 |
| Chr1 | three_prime_UTR | 3229312 | 3229515 | 3229312 | ID=MsG0180000234.01.T02:three_prime_utr;Parent=MsG0180000234.01.T02 |
| Gene Sequence |
| Protein sequence |
