Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180004328.01.T01 | XP_013468810.2 | 97.895 | 285 | 6 | 0 | 16 | 300 | 5 | 289 | 0 | 578 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180004328.01.T01 | Q70FG7 | 63.602 | 261 | 94 | 1 | 38 | 297 | 7 | 267 | 2.29E-124 | 359 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180004328.01.T01 | A0A396JW51 | 97.895 | 285 | 6 | 0 | 16 | 300 | 5 | 289 | 0.0 | 578 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048036.01 | MsG0180004328.01 | 0.881516 | 2.249421e-70 | 1.321893e-66 |
| MsG0080048301.01 | MsG0180004328.01 | 0.818354 | 2.048067e-52 | 1.529605e-49 |
| MsG0080048312.01 | MsG0180004328.01 | 0.836051 | 1.173295e-56 | 1.461515e-53 |
| MsG0080048345.01 | MsG0180004328.01 | 0.820245 | 7.593315e-53 | 5.976198e-50 |
| MsG0080048347.01 | MsG0180004328.01 | 0.878396 | 2.906015e-69 | 1.515022e-65 |
| MsG0080048349.01 | MsG0180004328.01 | 0.819743 | 9.894922e-53 | 7.679602e-50 |
| MsG0080048350.01 | MsG0180004328.01 | 0.808397 | 3.160737e-50 | 1.805330e-47 |
| MsG0080048352.01 | MsG0180004328.01 | 0.880647 | 4.622044e-70 | 2.626916e-66 |
| MsG0080049128.01 | MsG0180004328.01 | 0.807147 | 5.826090e-50 | 3.220490e-47 |
| MsG0180000234.01 | MsG0180004328.01 | 0.819337 | 1.224495e-52 | 9.395283e-50 |
| MsG0180000399.01 | MsG0180004328.01 | 0.818275 | 2.134285e-52 | 1.590323e-49 |
| MsG0180000738.01 | MsG0180004328.01 | 0.866586 | 2.559177e-65 | 8.670510e-62 |
| MsG0180000929.01 | MsG0180004328.01 | 0.854318 | 1.333032e-61 | 2.965224e-58 |
| MsG0180000930.01 | MsG0180004328.01 | 0.822755 | 1.999276e-53 | 1.688655e-50 |
| MsG0180001533.01 | MsG0180004328.01 | 0.860914 | 1.481859e-63 | 4.117367e-60 |
| MsG0180001691.01 | MsG0180004328.01 | 0.803108 | 4.079817e-49 | 2.032826e-46 |
| MsG0180001797.01 | MsG0180004328.01 | 0.808785 | 2.611182e-50 | 1.506536e-47 |
| MsG0180002006.01 | MsG0180004328.01 | 0.801410 | 9.123282e-49 | 4.353806e-46 |
| MsG0180002274.01 | MsG0180004328.01 | 0.830963 | 2.184491e-55 | 2.337375e-52 |
| MsG0180002935.01 | MsG0180004328.01 | 0.863972 | 1.699440e-64 | 5.248809e-61 |
| MsG0180003235.01 | MsG0180004328.01 | 0.859204 | 4.862821e-63 | 1.274030e-59 |
| MsG0180003240.01 | MsG0180004328.01 | 0.861212 | 1.202604e-63 | 3.376504e-60 |
| MsG0180003248.01 | MsG0180004328.01 | 0.805343 | 1.397737e-49 | 7.376604e-47 |
| MsG0180003249.01 | MsG0180004328.01 | 0.829912 | 3.946667e-55 | 4.095770e-52 |
| MsG0180003250.01 | MsG0180004328.01 | 0.823959 | 1.046103e-53 | 9.141142e-51 |
| MsG0180003484.01 | MsG0180004328.01 | 0.800109 | 1.681642e-48 | 7.764896e-46 |
| MsG0180004203.01 | MsG0180004328.01 | 0.974175 | 1.075428e-137 | 1.465141e-131 |
| MsG0180004328.01 | MsG0180004942.01 | 0.836750 | 7.794742e-57 | 9.915794e-54 |
| MsG0180004328.01 | MsG0180005328.01 | 0.805623 | 1.220683e-49 | 6.488909e-47 |
| MsG0180004328.01 | MsG0180005356.01 | 0.860078 | 2.653010e-63 | 7.163808e-60 |
| MsG0180004328.01 | MsG0180005357.01 | 0.847270 | 1.285804e-59 | 2.273102e-56 |
| MsG0180004328.01 | MsG0180005358.01 | 0.836926 | 7.025864e-57 | 8.984972e-54 |
| MsG0180004328.01 | MsG0180005542.01 | 0.811670 | 6.234845e-51 | 3.882760e-48 |
| MsG0180004328.01 | MsG0180005571.01 | 0.805660 | 1.199021e-49 | 6.379852e-47 |
| MsG0180004328.01 | MsG0180005648.01 | 0.844546 | 7.072277e-59 | 1.145672e-55 |
| MsG0180004328.01 | MsG0280006442.01 | 0.877567 | 5.665177e-69 | 2.861452e-65 |
| MsG0180004328.01 | MsG0280006476.01 | 0.806831 | 6.796022e-50 | 3.726065e-47 |
| MsG0180004328.01 | MsG0280006668.01 | 0.831839 | 1.329825e-55 | 1.460497e-52 |
| MsG0180004328.01 | MsG0280007216.01 | 0.871853 | 4.979894e-67 | 2.038837e-63 |
| MsG0180004328.01 | MsG0280007426.01 | 0.818112 | 2.323632e-52 | 1.723718e-49 |
| MsG0180004328.01 | MsG0280007759.01 | 0.808697 | 2.726494e-50 | 1.569440e-47 |
| MsG0180004328.01 | MsG0280007911.01 | 0.822773 | 1.979649e-53 | 1.672921e-50 |
| MsG0180004328.01 | MsG0280008405.01 | 0.864081 | 1.571602e-64 | 4.872838e-61 |
| MsG0180004328.01 | MsG0280008601.01 | 0.880319 | 6.052093e-70 | 3.393722e-66 |
| MsG0180004328.01 | MsG0280009167.01 | 0.844075 | 9.461194e-59 | 1.510216e-55 |
| MsG0180004328.01 | MsG0280009667.01 | 0.825441 | 4.679261e-54 | 4.265140e-51 |
| MsG0180004328.01 | MsG0280009673.01 | 0.844472 | 7.401641e-59 | 1.196214e-55 |
| MsG0180004328.01 | MsG0280010410.01 | 0.848841 | 4.740814e-60 | 8.814867e-57 |
| MsG0180004328.01 | MsG0280010802.01 | 0.903805 | 2.373328e-79 | 3.568246e-75 |
| MsG0180004328.01 | MsG0280011165.01 | 0.862379 | 5.282881e-64 | 1.543978e-60 |
| MsG0180004328.01 | MsG0280011193.01 | 0.854093 | 1.547786e-61 | 3.418400e-58 |
| MsG0180004328.01 | MsG0280011203.01 | 0.843280 | 1.544117e-58 | 2.404039e-55 |
| MsG0180004328.01 | MsG0280011236.01 | 0.802466 | 5.536994e-49 | 2.714232e-46 |
| MsG0180004328.01 | MsG0280011238.01 | 0.800700 | 1.274677e-48 | 5.974542e-46 |
| MsG0180004328.01 | MsG0380011613.01 | 0.840905 | 6.562360e-58 | 9.484018e-55 |
| MsG0180004328.01 | MsG0380011635.01 | 0.862134 | 6.285241e-64 | 1.821101e-60 |
| MsG0180004328.01 | MsG0380011636.01 | 0.808178 | 3.519235e-50 | 1.998582e-47 |
| MsG0180004328.01 | MsG0380011638.01 | 0.826348 | 2.849492e-54 | 2.665548e-51 |
| MsG0180004328.01 | MsG0380011974.01 | 0.810552 | 1.088953e-50 | 6.583928e-48 |
| MsG0180004328.01 | MsG0380012254.01 | 0.832872 | 7.377949e-56 | 8.353943e-53 |
| MsG0180004328.01 | MsG0380012654.01 | 0.853557 | 2.208504e-61 | 4.791071e-58 |
| MsG0180004328.01 | MsG0380013101.01 | 0.812326 | 4.485616e-51 | 2.843488e-48 |
| MsG0180004328.01 | MsG0380013272.01 | 0.843766 | 1.145273e-58 | 1.810312e-55 |
| MsG0180004328.01 | MsG0380013278.01 | 0.824508 | 7.773160e-54 | 6.898930e-51 |
| MsG0180004328.01 | MsG0380013285.01 | 0.828155 | 1.051909e-54 | 1.037020e-51 |
| MsG0180004328.01 | MsG0380013300.01 | 0.835944 | 1.249028e-56 | 1.550664e-53 |
| MsG0180004328.01 | MsG0380013449.01 | 0.806649 | 7.424738e-50 | 4.051409e-47 |
| MsG0180004328.01 | MsG0380013452.01 | 0.820640 | 6.162828e-53 | 4.903306e-50 |
| MsG0180004328.01 | MsG0380015080.01 | 0.811023 | 8.612242e-51 | 5.273409e-48 |
| MsG0180004328.01 | MsG0380015130.01 | 0.840886 | 6.635342e-58 | 9.584278e-55 |
| MsG0180004328.01 | MsG0380015271.01 | -0.817847 | 2.666294e-52 | 1.963659e-49 |
| MsG0180004328.01 | MsG0380015323.01 | 0.815543 | 8.760482e-52 | 6.057449e-49 |
| MsG0180004328.01 | MsG0380015369.01 | 0.849028 | 4.205499e-60 | 7.867943e-57 |
| MsG0180004328.01 | MsG0380015459.01 | 0.853623 | 2.113833e-61 | 4.595726e-58 |
| MsG0180004328.01 | MsG0380015572.01 | 0.816391 | 5.665402e-52 | 4.009244e-49 |
| MsG0180004328.01 | MsG0380015629.01 | 0.820051 | 8.411509e-53 | 6.585160e-50 |
| MsG0180004328.01 | MsG0380016020.01 | 0.843209 | 1.612559e-58 | 2.504677e-55 |
| MsG0180004328.01 | MsG0380016045.01 | 0.851536 | 8.327083e-61 | 1.690698e-57 |
| MsG0180004328.01 | MsG0380016086.01 | 0.824540 | 7.637439e-54 | 6.784975e-51 |
| MsG0180004328.01 | MsG0380016261.01 | 0.808280 | 3.346376e-50 | 1.905554e-47 |
| MsG0180004328.01 | MsG0380016270.01 | 0.800957 | 1.129136e-48 | 5.327577e-46 |
| MsG0180004328.01 | MsG0380016377.01 | 0.800775 | 1.230450e-48 | 5.778270e-46 |
| MsG0180004328.01 | MsG0380016409.01 | 0.806973 | 6.340399e-50 | 3.489091e-47 |
| MsG0180004328.01 | MsG0380016481.01 | 0.839161 | 1.869899e-57 | 2.560288e-54 |
| MsG0180004328.01 | MsG0380016801.01 | 0.811366 | 7.258548e-51 | 4.484399e-48 |
| MsG0180004328.01 | MsG0380016839.01 | 0.844589 | 6.883493e-59 | 1.116596e-55 |
| MsG0180004328.01 | MsG0380016862.01 | 0.803401 | 3.548588e-49 | 1.781582e-46 |
| MsG0180004328.01 | MsG0380017115.01 | 0.837251 | 5.804767e-57 | 7.496187e-54 |
| MsG0180004328.01 | MsG0380017151.01 | 0.884949 | 1.238301e-71 | 8.337771e-68 |
| MsG0180004328.01 | MsG0380017690.01 | 0.848193 | 7.165034e-60 | 1.304332e-56 |
| MsG0180004328.01 | MsG0380017754.01 | 0.848126 | 7.477251e-60 | 1.358244e-56 |
| MsG0180004328.01 | MsG0380017859.01 | 0.832347 | 9.954269e-56 | 1.109537e-52 |
| MsG0180004328.01 | MsG0380018070.01 | 0.800643 | 1.308955e-48 | 6.126632e-46 |
| MsG0180004328.01 | MsG0480018440.01 | 0.856414 | 3.268986e-62 | 7.796503e-59 |
| MsG0180004328.01 | MsG0480018521.01 | 0.808317 | 3.285989e-50 | 1.872981e-47 |
| MsG0180004328.01 | MsG0480018522.01 | 0.801518 | 8.671268e-49 | 4.149468e-46 |
| MsG0180004328.01 | MsG0480018768.01 | 0.854057 | 1.586128e-61 | 3.498874e-58 |
| MsG0180004328.01 | MsG0480018807.01 | 0.804647 | 1.953973e-49 | 1.012926e-46 |
| MsG0180004328.01 | MsG0480019105.01 | 0.803222 | 3.864826e-49 | 1.931387e-46 |
| MsG0180004328.01 | MsG0480019923.01 | 0.807911 | 4.010678e-50 | 2.261446e-47 |
| MsG0180004328.01 | MsG0480020497.01 | 0.862943 | 3.542952e-64 | 1.055967e-60 |
| MsG0180004328.01 | MsG0480021131.01 | 0.816617 | 5.042456e-52 | 3.590533e-49 |
| MsG0180004328.01 | MsG0480021697.01 | 0.866873 | 2.072707e-65 | 7.094903e-62 |
| MsG0180004328.01 | MsG0480022309.01 | 0.851708 | 7.443756e-61 | 1.519711e-57 |
| MsG0180004328.01 | MsG0480022310.01 | 0.830192 | 3.371772e-55 | 3.527517e-52 |
| MsG0180004328.01 | MsG0480022311.01 | 0.865119 | 7.438384e-65 | 2.392786e-61 |
| MsG0180004328.01 | MsG0480022515.01 | 0.813723 | 2.216000e-51 | 1.458380e-48 |
| MsG0180004328.01 | MsG0480022638.01 | 0.886641 | 2.865481e-72 | 2.063506e-68 |
| MsG0180004328.01 | MsG0480022655.01 | 0.804808 | 1.808034e-49 | 9.412467e-47 |
| MsG0180004328.01 | MsG0480022833.01 | 0.827254 | 1.731725e-54 | 1.662948e-51 |
| MsG0180004328.01 | MsG0480023102.01 | 0.863930 | 1.751643e-64 | 5.402311e-61 |
| MsG0180004328.01 | MsG0480023107.01 | 0.826392 | 2.781666e-54 | 2.605384e-51 |
| MsG0180004328.01 | MsG0480023349.01 | 0.900557 | 6.502617e-78 | 8.456382e-74 |
| MsG0180004328.01 | MsG0480023518.01 | 0.806798 | 6.905185e-50 | 3.782642e-47 |
| MsG0180004328.01 | MsG0480023693.01 | 0.837096 | 6.359886e-57 | 8.174719e-54 |
| MsG0180004328.01 | MsG0480023921.01 | 0.859644 | 3.586636e-63 | 9.539827e-60 |
| MsG0180004328.01 | MsG0580024041.01 | 0.822290 | 2.564343e-53 | 2.137396e-50 |
| MsG0180004328.01 | MsG0580024202.01 | 0.814966 | 1.177173e-51 | 8.011833e-49 |
| MsG0180004328.01 | MsG0580024207.01 | 0.815120 | 1.088018e-51 | 7.435804e-49 |
| MsG0180004328.01 | MsG0580024218.01 | 0.803617 | 3.200556e-49 | 1.615768e-46 |
| MsG0180004328.01 | MsG0580024220.01 | 0.802969 | 4.358634e-49 | 2.164098e-46 |
| MsG0180004328.01 | MsG0580024408.01 | 0.877920 | 4.266926e-69 | 2.185107e-65 |
| MsG0180004328.01 | MsG0580024929.01 | 0.805404 | 1.357082e-49 | 7.173426e-47 |
| MsG0180004328.01 | MsG0580024986.01 | 0.829690 | 4.470393e-55 | 4.609475e-52 |
| MsG0180004328.01 | MsG0580024990.01 | 0.842193 | 3.003016e-58 | 4.517655e-55 |
| MsG0180004328.01 | MsG0580025095.01 | 0.823257 | 1.527066e-53 | 1.308093e-50 |
| MsG0180004328.01 | MsG0580025527.01 | 0.808468 | 3.051742e-50 | 1.746317e-47 |
| MsG0180004328.01 | MsG0580025683.01 | 0.843282 | 1.541797e-58 | 2.400609e-55 |
| MsG0180004328.01 | MsG0580025870.01 | 0.835778 | 1.376397e-56 | 1.700350e-53 |
| MsG0180004328.01 | MsG0580026492.01 | 0.823735 | 1.180429e-53 | 1.025107e-50 |
| MsG0180004328.01 | MsG0580027337.01 | 0.806465 | 8.117346e-50 | 4.409048e-47 |
| MsG0180004328.01 | MsG0580027638.01 | 0.854675 | 1.051169e-61 | 2.366075e-58 |
| MsG0180004328.01 | MsG0580027646.01 | 0.821182 | 4.624892e-53 | 3.736094e-50 |
| MsG0180004328.01 | MsG0580027880.01 | 0.828118 | 1.073720e-54 | 1.057385e-51 |
| MsG0180004328.01 | MsG0580029296.01 | 0.804788 | 1.825816e-49 | 9.499747e-47 |
| MsG0180004328.01 | MsG0580029555.01 | 0.848775 | 4.944263e-60 | 9.173455e-57 |
| MsG0180004328.01 | MsG0580029626.01 | 0.846305 | 2.360980e-59 | 4.045916e-56 |
| MsG0180004328.01 | MsG0580030133.01 | 0.841106 | 5.810347e-58 | 8.448782e-55 |
| MsG0180004328.01 | MsG0580030135.01 | 0.867329 | 1.483161e-65 | 5.158464e-62 |
| MsG0180004328.01 | MsG0580030145.01 | 0.825634 | 4.211296e-54 | 3.860074e-51 |
| MsG0180004328.01 | MsG0680030336.01 | 0.815183 | 1.053262e-51 | 7.210709e-49 |
| MsG0180004328.01 | MsG0680030960.01 | 0.808212 | 3.461346e-50 | 1.967454e-47 |
| MsG0180004328.01 | MsG0680031009.01 | 0.848629 | 5.427881e-60 | 1.002198e-56 |
| MsG0180004328.01 | MsG0680031429.01 | 0.802153 | 6.421737e-49 | 3.122927e-46 |
| MsG0180004328.01 | MsG0680033754.01 | 0.849833 | 2.509188e-60 | 4.818265e-57 |
| MsG0180004328.01 | MsG0680034255.01 | 0.816111 | 6.542709e-52 | 4.594886e-49 |
| MsG0180004328.01 | MsG0680034316.01 | 0.827556 | 1.465456e-54 | 1.419542e-51 |
| MsG0180004328.01 | MsG0680034317.01 | 0.822570 | 2.207306e-53 | 1.854645e-50 |
| MsG0180004328.01 | MsG0680034649.01 | 0.801661 | 8.103705e-49 | 3.891804e-46 |
| MsG0180004328.01 | MsG0680035841.01 | 0.833191 | 6.144816e-56 | 7.024667e-53 |
| MsG0180004328.01 | MsG0780035953.01 | 0.812998 | 3.197252e-51 | 2.063144e-48 |
| MsG0180004328.01 | MsG0780036661.01 | 0.864339 | 1.305790e-64 | 4.085416e-61 |
| MsG0180004328.01 | MsG0780036960.01 | 0.816049 | 6.755619e-52 | 4.736571e-49 |
| MsG0180004328.01 | MsG0780037917.01 | 0.841461 | 4.685148e-58 | 6.889591e-55 |
| MsG0180004328.01 | MsG0780037943.01 | 0.807190 | 5.704641e-50 | 3.156982e-47 |
| MsG0180004328.01 | MsG0780038519.01 | 0.815746 | 7.893641e-52 | 5.488836e-49 |
| MsG0180004328.01 | MsG0780038622.01 | 0.844118 | 9.214956e-59 | 1.472903e-55 |
| MsG0180004328.01 | MsG0780038722.01 | 0.800054 | 1.724945e-48 | 7.954003e-46 |
| MsG0180004328.01 | MsG0780038860.01 | 0.829957 | 3.848979e-55 | 3.999281e-52 |
| MsG0180004328.01 | MsG0780038922.01 | 0.849247 | 3.655679e-60 | 6.888797e-57 |
| MsG0180004328.01 | MsG0780038939.01 | 0.834879 | 2.321615e-56 | 2.791644e-53 |
| MsG0180004328.01 | MsG0780038963.01 | 0.839028 | 2.023700e-57 | 2.759736e-54 |
| MsG0180004328.01 | MsG0780039576.01 | 0.837646 | 4.596435e-57 | 6.009776e-54 |
| MsG0180004328.01 | MsG0780039665.01 | 0.850460 | 1.674456e-60 | 3.282254e-57 |
| MsG0180004328.01 | MsG0780039883.01 | 0.822344 | 2.490738e-53 | 2.079255e-50 |
| MsG0180004328.01 | MsG0780039925.01 | 0.816136 | 6.461964e-52 | 4.541214e-49 |
| MsG0180004328.01 | MsG0780039968.01 | 0.874463 | 6.623478e-68 | 2.984769e-64 |
| MsG0180004328.01 | MsG0780039978.01 | 0.832736 | 7.974271e-56 | 8.992411e-53 |
| MsG0180004328.01 | MsG0780040168.01 | 0.845202 | 4.704567e-59 | 7.780678e-56 |
| MsG0180004328.01 | MsG0780040181.01 | 0.830969 | 2.176921e-55 | 2.329742e-52 |
| MsG0180004328.01 | MsG0780040805.01 | 0.817040 | 4.052308e-52 | 2.919186e-49 |
| MsG0180004328.01 | MsG0780040806.01 | 0.813363 | 2.658341e-51 | 1.732544e-48 |
| MsG0180004328.01 | MsG0780040977.01 | 0.808901 | 2.466070e-50 | 1.427197e-47 |
| MsG0180004328.01 | MsG0780041172.01 | 0.830289 | 3.192816e-55 | 3.349368e-52 |
| MsG0180004328.01 | MsG0780041176.01 | 0.803677 | 3.110727e-49 | 1.572776e-46 |
| MsG0180004328.01 | MsG0780041177.01 | 0.821886 | 3.180288e-53 | 2.620362e-50 |
| MsG0180004328.01 | MsG0780041316.01 | 0.825294 | 5.070118e-54 | 4.602528e-51 |
| MsG0180004328.01 | MsG0780041317.01 | 0.818883 | 1.553152e-52 | 1.177039e-49 |
| MsG0180004328.01 | MsG0780041447.01 | 0.828923 | 6.863243e-55 | 6.918345e-52 |
| MsG0180004328.01 | MsG0780041556.01 | 0.837726 | 4.386151e-57 | 5.748774e-54 |
| MsG0180004328.01 | MsG0780041574.01 | 0.847490 | 1.119095e-59 | 1.992466e-56 |
| MsG0180004328.01 | MsG0780041720.01 | -0.807245 | 5.553532e-50 | 3.077837e-47 |
| MsG0180004328.01 | MsG0880042261.01 | 0.804809 | 1.807063e-49 | 9.407767e-47 |
| MsG0180004328.01 | MsG0880042740.01 | 0.855011 | 8.396418e-62 | 1.911146e-58 |
| MsG0180004328.01 | MsG0880042810.01 | 0.828437 | 8.992885e-55 | 8.938680e-52 |
| MsG0180004328.01 | MsG0880043017.01 | 0.818475 | 1.922483e-52 | 1.440598e-49 |
| MsG0180004328.01 | MsG0880043364.01 | 0.847345 | 1.226454e-59 | 2.173230e-56 |
| MsG0180004328.01 | MsG0880043481.01 | 0.800952 | 1.131924e-48 | 5.339948e-46 |
| MsG0180004328.01 | MsG0880043828.01 | 0.824666 | 7.132029e-54 | 6.359855e-51 |
| MsG0180004328.01 | MsG0880045272.01 | 0.808362 | 3.214325e-50 | 1.834347e-47 |
| MsG0180004328.01 | MsG0880045458.01 | 0.803305 | 3.714961e-49 | 1.860411e-46 |
| MsG0180004328.01 | MsG0880045677.01 | 0.848265 | 6.843408e-60 | 1.248799e-56 |
| MsG0180004328.01 | MsG0880046158.01 | 0.865469 | 5.775651e-65 | 1.881113e-61 |
| MsG0180004328.01 | MsG0880046429.01 | 0.881119 | 3.126965e-70 | 1.809142e-66 |
| MsG0180004328.01 | MsG0880046863.01 | 0.810881 | 9.244519e-51 | 5.639062e-48 |
| MsG0180004328.01 | MsG0880046996.01 | 0.835510 | 1.609223e-56 | 1.972016e-53 |
| MsG0180004328.01 | MsG0880047568.01 | 0.807224 | 5.611841e-50 | 3.108373e-47 |
| MsG0180004328.01 | MsG0880047665.01 | 0.890046 | 1.402962e-73 | 1.160631e-69 |
| MsG0180004328.01 | MsG0880047714.01 | 0.853675 | 2.043422e-61 | 4.449986e-58 |
| MsG0180004328.01 | MsG0880047747.01 | 0.848893 | 4.584824e-60 | 8.539072e-57 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180004328.01.T01 | MTR_1g077030 | 99.245 | 265 | 2 | 0 | 36 | 300 | 1 | 265 | 0.0 | 544 |
| MsG0180004328.01.T01 | MTR_6g064960 | 73.408 | 267 | 68 | 3 | 36 | 300 | 1 | 266 | 5.43e-145 | 408 |
| MsG0180004328.01.T01 | MTR_6g036660 | 64.398 | 191 | 37 | 2 | 111 | 300 | 9 | 169 | 5.03e-79 | 238 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180004328.01.T01 | AT4G15093 | 64.314 | 255 | 87 | 3 | 38 | 288 | 4 | 258 | 2.23e-123 | 354 |
Find 86 sgRNAs with CRISPR-Local
Find 136 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGGCAGGCACAATGTATTT+TGG | 0.215290 | 1:+76451586 | None:intergenic |
| GGGCTCTGGCATTTGATTCC+TGG | 0.223358 | 1:-76452162 | MsG0180004328.01.T01:CDS |
| CGCTTCAATATTCTACATTA+AGG | 0.243705 | 1:-76453349 | MsG0180004328.01.T01:CDS |
| TTCTTGTTATCTCTGGTCAT+TGG | 0.280377 | 1:-76453151 | MsG0180004328.01.T01:CDS |
| TGCAGGAATTGTTTCATCTA+TGG | 0.287643 | 1:+76453226 | None:intergenic |
| CTTCCCATTGCATGTGGCTA+TGG | 0.326906 | 1:-76451821 | MsG0180004328.01.T01:CDS |
| CCCTCCTCCTCCCTGGGCTC+TGG | 0.327725 | 1:-76452176 | MsG0180004328.01.T01:CDS |
| TCTTGTTATCTCTGGTCATT+GGG | 0.336206 | 1:-76453150 | MsG0180004328.01.T01:CDS |
| TTCACCCTCTTTGCTAACTT+TGG | 0.341100 | 1:+76452460 | None:intergenic |
| ATTGTGATTAACAACGTTAA+CGG | 0.372671 | 1:+76453112 | None:intergenic |
| CATGTTATGAGTGGCACTTC+CGG | 0.373240 | 1:+76452222 | None:intergenic |
| GAGAAAGCCCTCCTCCTCCC+TGG | 0.379390 | 1:-76452183 | MsG0180004328.01.T01:CDS |
| GATGAGGGTGTTCTAATAAT+CGG | 0.388648 | 1:-76452247 | MsG0180004328.01.T01:CDS |
| TTTGCTAACTTTGGAGCCCC+TGG | 0.388909 | 1:+76452469 | None:intergenic |
| AAGGAACTGATCGAAGCATC+TGG | 0.408387 | 1:-76452439 | MsG0180004328.01.T01:CDS |
| GCCAGAGCCCAGGGAGGAGG+AGG | 0.408526 | 1:+76452175 | None:intergenic |
| AATGAAACCATCCATGATTT+CGG | 0.409867 | 1:-76453092 | MsG0180004328.01.T01:CDS |
| TCTGCCATTCTTGTTATCTC+TGG | 0.410290 | 1:-76453158 | MsG0180004328.01.T01:CDS |
| TATACCAGTATGTCAACTTT+CGG | 0.414509 | 1:-76452332 | MsG0180004328.01.T01:CDS |
| TCGGTTTCATCAAATAGAAA+TGG | 0.415828 | 1:-76452313 | MsG0180004328.01.T01:CDS |
| AGAACACCCTCATCTTTAAG+AGG | 0.426483 | 1:+76452256 | None:intergenic |
| TTCCCATTGCATGTGGCTAT+GGG | 0.428707 | 1:-76451820 | MsG0180004328.01.T01:CDS |
| GGTACTTACCATTATAACTT+AGG | 0.430513 | 1:-76452292 | MsG0180004328.01.T01:CDS |
| GGATGAGCCACTTTCGCATA+TGG | 0.439113 | 1:+76451859 | None:intergenic |
| CATGGAAATTCTTGACATCA+TGG | 0.450298 | 1:-76453205 | MsG0180004328.01.T01:CDS |
| CAAGGTTATTCATGAGAGTT+GGG | 0.452153 | 1:-76451773 | MsG0180004328.01.T01:CDS |
| ATGATTTCGGTGGCTTTCCT+AGG | 0.454213 | 1:-76453079 | MsG0180004328.01.T01:CDS |
| ACTCATAACATGAGAGCAAT+TGG | 0.455156 | 1:-76452211 | MsG0180004328.01.T01:CDS |
| CCAAGGTTATTCATGAGAGT+TGG | 0.456924 | 1:-76451774 | MsG0180004328.01.T01:CDS |
| ATTCATGAGAGTTGGGATAG+TGG | 0.458572 | 1:-76451766 | MsG0180004328.01.T01:CDS |
| CAGCTCAAGTATCGAGCACC+AGG | 0.465150 | 1:-76452487 | MsG0180004328.01.T01:CDS |
| TGATTAACAACGTTAACGGT+TGG | 0.472085 | 1:+76453116 | None:intergenic |
| TAGGAAAGCCACCGAAATCA+TGG | 0.473235 | 1:+76453081 | None:intergenic |
| CTTTCCTAGGAGCATGTACA+AGG | 0.474154 | 1:-76453066 | MsG0180004328.01.T01:intron |
| GAAACCGAAAGTTGACATAC+TGG | 0.474557 | 1:+76452328 | None:intergenic |
| TGCAATGGGAAGAAATGATC+AGG | 0.474579 | 1:+76451832 | None:intergenic |
| AGAAAGCCCTCCTCCTCCCT+GGG | 0.482352 | 1:-76452182 | MsG0180004328.01.T01:CDS |
| GGAATCAAATGCCAGAGCCC+AGG | 0.488956 | 1:+76452165 | None:intergenic |
| CAAACCTTGTACATGCTCCT+AGG | 0.492861 | 1:+76453062 | None:intergenic |
| CTCCCATAGCCACATGCAAT+GGG | 0.493902 | 1:+76451818 | None:intergenic |
| AATGCCAGAGCCCAGGGAGG+AGG | 0.498803 | 1:+76452172 | None:intergenic |
| AGAATGGCAGATGGTCTCTC+AGG | 0.511823 | 1:+76453170 | None:intergenic |
| GCTCCCATAGCCACATGCAA+TGG | 0.521180 | 1:+76451817 | None:intergenic |
| ATACATTGTGCCTGCCTGCA+AGG | 0.526050 | 1:-76451581 | MsG0180004328.01.T01:three_prime_UTR |
| CATGTGGCTATGGGAGCTGC+TGG | 0.535183 | 1:-76451811 | MsG0180004328.01.T01:CDS |
| CATACTGGTATATCAGCCTC+TGG | 0.544796 | 1:+76452343 | None:intergenic |
| GGCTCCAAAGTTAGCAAAGA+GGG | 0.544809 | 1:-76452464 | MsG0180004328.01.T01:CDS |
| GGTGTTCTAATAATCGGATC+CGG | 0.552606 | 1:-76452241 | MsG0180004328.01.T01:CDS |
| CCAACTCTCATGAATAACCT+TGG | 0.556818 | 1:+76451774 | None:intergenic |
| AAGAATCTCTCGTCGAAGGA+AGG | 0.559361 | 1:-76452135 | MsG0180004328.01.T01:intron |
| TCATTTCTTCCCATTGCATG+TGG | 0.560813 | 1:-76451827 | MsG0180004328.01.T01:CDS |
| ATTCTTGACATCATGGAAAG+AGG | 0.565403 | 1:-76453198 | MsG0180004328.01.T01:CDS |
| GAAGGCGCCATATGCGAAAG+TGG | 0.568307 | 1:-76451866 | MsG0180004328.01.T01:CDS |
| ATGACCAGAGATAACAAGAA+TGG | 0.569073 | 1:+76453154 | None:intergenic |
| GTTTCATCTATGGCTAGTGT+TGG | 0.573056 | 1:+76453236 | None:intergenic |
| ATGCGAAAGTGGCTCATCCA+TGG | 0.576625 | 1:-76451855 | MsG0180004328.01.T01:CDS |
| GGAGGAGGAGGGCTTTCTCG+AGG | 0.577926 | 1:+76452187 | None:intergenic |
| AGCATCTGGGTTGAGTCGAG+TGG | 0.579096 | 1:-76452425 | MsG0180004328.01.T01:CDS |
| AATAGCTCCTCTTAAAGATG+AGG | 0.581989 | 1:-76452263 | MsG0180004328.01.T01:CDS |
| GATGTCAAGAATTTCCATGC+AGG | 0.582906 | 1:+76453209 | None:intergenic |
| AGCTGCTGTGAAACCAAAAG+AGG | 0.584042 | 1:+76451729 | None:intergenic |
| GAATCAAATGCCAGAGCCCA+GGG | 0.587952 | 1:+76452166 | None:intergenic |
| TGGTGAGAATTCAAAGGCCA+AGG | 0.591154 | 1:-76451791 | MsG0180004328.01.T01:CDS |
| GGGAAGAAATGATCAGGCCA+TGG | 0.597088 | 1:+76451838 | None:intergenic |
| CATAAATCACTACGAAGAGA+AGG | 0.601560 | 1:-76451884 | MsG0180004328.01.T01:CDS |
| CCAGAGCCCAGGGAGGAGGA+GGG | 0.604544 | 1:+76452176 | None:intergenic |
| AGGAACTGATCGAAGCATCT+GGG | 0.606798 | 1:-76452438 | MsG0180004328.01.T01:CDS |
| AAAGTTAGCAAAGAGGGTGA+AGG | 0.608328 | 1:-76452458 | MsG0180004328.01.T01:CDS |
| TTAAAAGAATCTCTCGTCGA+AGG | 0.612211 | 1:-76452139 | MsG0180004328.01.T01:CDS |
| GAAACCATCCATGATTTCGG+TGG | 0.621697 | 1:-76453089 | MsG0180004328.01.T01:CDS |
| ATAGCTCCTCTTAAAGATGA+GGG | 0.624747 | 1:-76452262 | MsG0180004328.01.T01:CDS |
| TAGATGAAACAATTCCTGCA+TGG | 0.625784 | 1:-76453223 | MsG0180004328.01.T01:CDS |
| AGCTGCTGGTGAGAATTCAA+AGG | 0.626345 | 1:-76451797 | MsG0180004328.01.T01:CDS |
| GTGGGCTTGATCATGGAACA+TGG | 0.640571 | 1:-76452387 | MsG0180004328.01.T01:CDS |
| TTACATAAAATACAGTAGAA+CGG | 0.643874 | 1:+76451686 | None:intergenic |
| AAAGCCACCGAAATCATGGA+TGG | 0.655429 | 1:+76453085 | None:intergenic |
| GAGATAACAAGAATGGCAGA+TGG | 0.658261 | 1:+76453161 | None:intergenic |
| TGCTCAATGTTCTAGATACG+AGG | 0.660058 | 1:-76451908 | MsG0180004328.01.T01:intron |
| AATTGCTCTCATGTTATGAG+TGG | 0.665609 | 1:+76452213 | None:intergenic |
| GCTCAAGTATCGAGCACCAG+GGG | 0.665784 | 1:-76452485 | MsG0180004328.01.T01:CDS |
| TCTCATGTTGATGTATCCAG+AGG | 0.674561 | 1:-76452359 | MsG0180004328.01.T01:CDS |
| TCTGGATACATCAACATGAG+AGG | 0.675165 | 1:+76452361 | None:intergenic |
| GGGCTCCAAAGTTAGCAAAG+AGG | 0.677936 | 1:-76452465 | MsG0180004328.01.T01:CDS |
| AGCTCAAGTATCGAGCACCA+GGG | 0.689968 | 1:-76452486 | MsG0180004328.01.T01:CDS |
| TGGGCTTGATCATGGAACAT+GGG | 0.724784 | 1:-76452386 | MsG0180004328.01.T01:CDS |
| TCAAATGCCAGAGCCCAGGG+AGG | 0.758664 | 1:+76452169 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGATATATATAAAACAAAAA+TGG | + | Chr1:76452409-76452428 | None:intergenic | 10.0% |
| !! | CAAGATTTATTCCATTAAAT+GGG | + | Chr1:76452048-76452067 | None:intergenic | 20.0% |
| !! | TTACATAAAATACAGTAGAA+CGG | + | Chr1:76453256-76453275 | None:intergenic | 20.0% |
| !!! | AAGCAAAAGTATACAAAAAA+TGG | - | Chr1:76451645-76451664 | MsG0180004328.01.T01:three_prime_UTR | 20.0% |
| !!! | CATACATGTATTTTTAGATT+AGG | + | Chr1:76453310-76453329 | None:intergenic | 20.0% |
| !!! | GCTACAATTTCTTAATTTTT+CGG | + | Chr1:76452108-76452127 | None:intergenic | 20.0% |
| !!! | TCACTTTTTTTCTTGTATTT+TGG | + | Chr1:76451618-76451637 | None:intergenic | 20.0% |
| ! | AAGAAATTGTAGCAATAGAT+TGG | - | Chr1:76452115-76452134 | MsG0180004328.01.T01:intron | 25.0% |
| ! | ATATGCATACATTACACATT+AGG | - | Chr1:76452170-76452189 | MsG0180004328.01.T01:CDS | 25.0% |
| ! | ATTACATCTTGAAATTTGAG+CGG | - | Chr1:76451974-76451993 | MsG0180004328.01.T01:intron | 25.0% |
| ! | ATTGTGATTAACAACGTTAA+CGG | + | Chr1:76451830-76451849 | None:intergenic | 25.0% |
| ! | CCAAGATTTATTCCATTAAA+TGG | + | Chr1:76452049-76452068 | None:intergenic | 25.0% |
| ! | CCATTTAATGGAATAAATCT+TGG | - | Chr1:76452046-76452065 | MsG0180004328.01.T01:intron | 25.0% |
| ! | GGAATCTGAATTAAACAATT+AGG | + | Chr1:76452253-76452272 | None:intergenic | 25.0% |
| ! | TTTATTCCATTAAATGGGAT+CGG | + | Chr1:76452043-76452062 | None:intergenic | 25.0% |
| !! | TATACAAAAAATGGCATTGA+AGG | - | Chr1:76451654-76451673 | MsG0180004328.01.T01:three_prime_UTR | 25.0% |
| !!! | TTGCTTTTCCTAAGTTATAA+TGG | + | Chr1:76452658-76452677 | None:intergenic | 25.0% |
| AAAACAAAAATGGACCATTG+TGG | + | Chr1:76452399-76452418 | None:intergenic | 30.0% | |
| AAATAGCAACTATAACGTAG+TGG | - | Chr1:76452880-76452899 | MsG0180004328.01.T01:intron | 30.0% | |
| AATGAAACCATCCATGATTT+CGG | - | Chr1:76451847-76451866 | MsG0180004328.01.T01:CDS | 30.0% | |
| CGCTTCAATATTCTACATTA+AGG | - | Chr1:76451590-76451609 | MsG0180004328.01.T01:three_prime_UTR | 30.0% | |
| CTATTGAATCATAACTGATC+CGG | - | Chr1:76452213-76452232 | MsG0180004328.01.T01:CDS | 30.0% | |
| GATTGGATAAACAAACATTG+AGG | - | Chr1:76452132-76452151 | MsG0180004328.01.T01:intron | 30.0% | |
| GGTACTTACCATTATAACTT+AGG | - | Chr1:76452647-76452666 | MsG0180004328.01.T01:intron | 30.0% | |
| GGTGCAATTAATAAAAACTC+AGG | + | Chr1:76453335-76453354 | None:intergenic | 30.0% | |
| TAGCTCTTCAATTGATACTT+AGG | + | Chr1:76452346-76452365 | None:intergenic | 30.0% | |
| TATACCAGTATGTCAACTTT+CGG | - | Chr1:76452607-76452626 | MsG0180004328.01.T01:intron | 30.0% | |
| TATTGAATCATAACTGATCC+GGG | - | Chr1:76452214-76452233 | MsG0180004328.01.T01:CDS | 30.0% | |
| TCGGTTTCATCAAATAGAAA+TGG | - | Chr1:76452626-76452645 | MsG0180004328.01.T01:intron | 30.0% | |
| TTAATTCAGATTCCGAACTT+TGG | - | Chr1:76452259-76452278 | MsG0180004328.01.T01:CDS | 30.0% | |
| ! | GAAACGTTTTACATATCACA+TGG | - | Chr1:76451676-76451695 | MsG0180004328.01.T01:three_prime_UTR | 30.0% |
| !! | ATAGTTGCTATTTGACAACA+TGG | + | Chr1:76452873-76452892 | None:intergenic | 30.0% |
| !!! | TTTCGGTATCGATTTGTTTT+TGG | - | Chr1:76452306-76452325 | MsG0180004328.01.T01:CDS | 30.0% |
| AATAGCTCCTCTTAAAGATG+AGG | - | Chr1:76452676-76452695 | MsG0180004328.01.T01:intron | 35.0% | |
| AATTGCTCTCATGTTATGAG+TGG | + | Chr1:76452729-76452748 | None:intergenic | 35.0% | |
| ACTCATAACATGAGAGCAAT+TGG | - | Chr1:76452728-76452747 | MsG0180004328.01.T01:intron | 35.0% | |
| ATAGCTCCTCTTAAAGATGA+GGG | - | Chr1:76452677-76452696 | MsG0180004328.01.T01:intron | 35.0% | |
| ATGACCAGAGATAACAAGAA+TGG | + | Chr1:76451788-76451807 | None:intergenic | 35.0% | |
| ATTCTTGACATCATGGAAAG+AGG | - | Chr1:76451741-76451760 | MsG0180004328.01.T01:CDS | 35.0% | |
| CAAGGTTATTCATGAGAGTT+GGG | - | Chr1:76453166-76453185 | MsG0180004328.01.T01:CDS | 35.0% | |
| CATAAATCACTACGAAGAGA+AGG | - | Chr1:76453055-76453074 | MsG0180004328.01.T01:intron | 35.0% | |
| CATGGAAATTCTTGACATCA+TGG | - | Chr1:76451734-76451753 | MsG0180004328.01.T01:CDS | 35.0% | |
| GAAACTAGAGTCCAATCATT+CGG | + | Chr1:76452290-76452309 | None:intergenic | 35.0% | |
| GATACTTGAGCTGCAAATAA+AGG | + | Chr1:76452445-76452464 | None:intergenic | 35.0% | |
| GCATACATTACACATTAGGT+TGG | - | Chr1:76452174-76452193 | MsG0180004328.01.T01:CDS | 35.0% | |
| TAGATGAAACAATTCCTGCA+TGG | - | Chr1:76451716-76451735 | MsG0180004328.01.T01:exon | 35.0% | |
| TGATTAACAACGTTAACGGT+TGG | + | Chr1:76451826-76451845 | None:intergenic | 35.0% | |
| TGCAGGAATTGTTTCATCTA+TGG | + | Chr1:76451716-76451735 | None:intergenic | 35.0% | |
| TGGACGAAGATAAAAAACGT+GGG | - | Chr1:76452534-76452553 | MsG0180004328.01.T01:intron | 35.0% | |
| TTAAAAGAATCTCTCGTCGA+AGG | - | Chr1:76452800-76452819 | MsG0180004328.01.T01:intron | 35.0% | |
| TTGTTCTGTGATACGTGATT+TGG | - | Chr1:76452921-76452940 | MsG0180004328.01.T01:intron | 35.0% | |
| TTTCGGTTCTCAAACAGATT+TGG | + | Chr1:76452091-76452110 | None:intergenic | 35.0% | |
| ! | GAATGATTGGACTCTAGTTT+CGG | - | Chr1:76452289-76452308 | MsG0180004328.01.T01:CDS | 35.0% |
| ! | TCTCATTTTATGTTCCTTGC+AGG | + | Chr1:76453375-76453394 | None:intergenic | 35.0% |
| ! | TCTTGTTATCTCTGGTCATT+GGG | - | Chr1:76451789-76451808 | MsG0180004328.01.T01:CDS | 35.0% |
| ! | TTCTTGTTATCTCTGGTCAT+TGG | - | Chr1:76451788-76451807 | MsG0180004328.01.T01:CDS | 35.0% |
| !! | GATGAGGGTGTTCTAATAAT+CGG | - | Chr1:76452692-76452711 | MsG0180004328.01.T01:intron | 35.0% |
| !! | GCTTTTTCTTATGCCTCTTT+TGG | - | Chr1:76453197-76453216 | MsG0180004328.01.T01:CDS | 35.0% |
| AAAAAACGTGGGCTTGATCA+TGG | - | Chr1:76452545-76452564 | MsG0180004328.01.T01:intron | 40.0% | |
| AAAGTTAGCAAAGAGGGTGA+AGG | - | Chr1:76452481-76452500 | MsG0180004328.01.T01:CDS | 40.0% | |
| AATAAATCTTGGTTGTGCGC+TGG | - | Chr1:76452057-76452076 | MsG0180004328.01.T01:intron | 40.0% | |
| AGAACACCCTCATCTTTAAG+AGG | + | Chr1:76452686-76452705 | None:intergenic | 40.0% | |
| ATTCATGAGAGTTGGGATAG+TGG | - | Chr1:76453173-76453192 | MsG0180004328.01.T01:CDS | 40.0% | |
| CCAACTCTCATGAATAACCT+TGG | + | Chr1:76453168-76453187 | None:intergenic | 40.0% | |
| CCAAGGTTATTCATGAGAGT+TGG | - | Chr1:76453165-76453184 | MsG0180004328.01.T01:CDS | 40.0% | |
| GAAACCGAAAGTTGACATAC+TGG | + | Chr1:76452614-76452633 | None:intergenic | 40.0% | |
| GAGATAACAAGAATGGCAGA+TGG | + | Chr1:76451781-76451800 | None:intergenic | 40.0% | |
| GATGTCAAGAATTTCCATGC+AGG | + | Chr1:76451733-76451752 | None:intergenic | 40.0% | |
| GGTGTTCTAATAATCGGATC+CGG | - | Chr1:76452698-76452717 | MsG0180004328.01.T01:intron | 40.0% | |
| GTGGACGAAGATAAAAAACG+TGG | - | Chr1:76452533-76452552 | MsG0180004328.01.T01:intron | 40.0% | |
| GTTTCATCTATGGCTAGTGT+TGG | + | Chr1:76451706-76451725 | None:intergenic | 40.0% | |
| TCATTTCTTCCCATTGCATG+TGG | - | Chr1:76453112-76453131 | MsG0180004328.01.T01:CDS | 40.0% | |
| TCTCATGTTGATGTATCCAG+AGG | - | Chr1:76452580-76452599 | MsG0180004328.01.T01:intron | 40.0% | |
| TCTGGATACATCAACATGAG+AGG | + | Chr1:76452581-76452600 | None:intergenic | 40.0% | |
| TGAGCTGCAAATAAAGGAAC+AGG | + | Chr1:76452439-76452458 | None:intergenic | 40.0% | |
| TGCAATGGGAAGAAATGATC+AGG | + | Chr1:76453110-76453129 | None:intergenic | 40.0% | |
| TTCACCCTCTTTGCTAACTT+TGG | + | Chr1:76452482-76452501 | None:intergenic | 40.0% | |
| ! | ATTTTATGTTCCTTGCAGGC+AGG | + | Chr1:76453371-76453390 | None:intergenic | 40.0% |
| ! | GACGAGAGATTCTTTTAACC+AGG | + | Chr1:76452798-76452817 | None:intergenic | 40.0% |
| ! | GTTTTCCAATCTCTCCACAA+TGG | - | Chr1:76452382-76452401 | MsG0180004328.01.T01:CDS | 40.0% |
| ! | TCTGCCATTCTTGTTATCTC+TGG | - | Chr1:76451781-76451800 | MsG0180004328.01.T01:CDS | 40.0% |
| ! | TGCTCAATGTTCTAGATACG+AGG | - | Chr1:76453031-76453050 | MsG0180004328.01.T01:intron | 40.0% |
| AAAGCCACCGAAATCATGGA+TGG | + | Chr1:76451857-76451876 | None:intergenic | 45.0% | |
| AAGAATCTCTCGTCGAAGGA+AGG | - | Chr1:76452804-76452823 | MsG0180004328.01.T01:intron | 45.0% | |
| ACTAGAGTCCAATCATTCGG+TGG | + | Chr1:76452287-76452306 | None:intergenic | 45.0% | |
| AGCTGCTGGTGAGAATTCAA+AGG | - | Chr1:76453142-76453161 | MsG0180004328.01.T01:CDS | 45.0% | |
| AGCTGCTGTGAAACCAAAAG+AGG | + | Chr1:76453213-76453232 | None:intergenic | 45.0% | |
| ATGATTTCGGTGGCTTTCCT+AGG | - | Chr1:76451860-76451879 | MsG0180004328.01.T01:CDS | 45.0% | |
| ATGGACCATTGTGGAGAGAT+TGG | + | Chr1:76452390-76452409 | None:intergenic | 45.0% | |
| CAAACCTTGTACATGCTCCT+AGG | + | Chr1:76451880-76451899 | None:intergenic | 45.0% | |
| CATACTGGTATATCAGCCTC+TGG | + | Chr1:76452599-76452618 | None:intergenic | 45.0% | |
| CATGTTATGAGTGGCACTTC+CGG | + | Chr1:76452720-76452739 | None:intergenic | 45.0% | |
| GAAACCATCCATGATTTCGG+TGG | - | Chr1:76451850-76451869 | MsG0180004328.01.T01:CDS | 45.0% | |
| GGCTCCAAAGTTAGCAAAGA+GGG | - | Chr1:76452475-76452494 | MsG0180004328.01.T01:CDS | 45.0% | |
| GTGTAGCCGATCCCATTTAA+TGG | - | Chr1:76452034-76452053 | MsG0180004328.01.T01:intron | 45.0% | |
| TAGGAAAGCCACCGAAATCA+TGG | + | Chr1:76451861-76451880 | None:intergenic | 45.0% | |
| TGGGCTTGATCATGGAACAT+GGG | - | Chr1:76452553-76452572 | MsG0180004328.01.T01:intron | 45.0% | |
| TGGTGAGAATTCAAAGGCCA+AGG | - | Chr1:76453148-76453167 | MsG0180004328.01.T01:CDS | 45.0% | |
| TGTTGTCAAACTGCAGCTAG+TGG | - | Chr1:76452951-76452970 | MsG0180004328.01.T01:intron | 45.0% | |
| TTAGGCCATCTTTGCTTACC+CGG | + | Chr1:76452235-76452254 | None:intergenic | 45.0% | |
| TTCCCATTGCATGTGGCTAT+GGG | - | Chr1:76453119-76453138 | MsG0180004328.01.T01:CDS | 45.0% | |
| ! | AAGGAACTGATCGAAGCATC+TGG | - | Chr1:76452500-76452519 | MsG0180004328.01.T01:intron | 45.0% |
| ! | AGGAACTGATCGAAGCATCT+GGG | - | Chr1:76452501-76452520 | MsG0180004328.01.T01:intron | 45.0% |
| ! | CAGGCAGGCACAATGTATTT+TGG | + | Chr1:76453356-76453375 | None:intergenic | 45.0% |
| ! | CATTCGGTGGAACCAAAGTT+CGG | + | Chr1:76452274-76452293 | None:intergenic | 45.0% |
| ! | CTTTCCTAGGAGCATGTACA+AGG | - | Chr1:76451873-76451892 | MsG0180004328.01.T01:CDS | 45.0% |
| ! | CTTTGGTTCCACCGAATGAT+TGG | - | Chr1:76452276-76452295 | MsG0180004328.01.T01:CDS | 45.0% |
| AGAATGGCAGATGGTCTCTC+AGG | + | Chr1:76451772-76451791 | None:intergenic | 50.0% | |
| ATACATTGTGCCTGCCTGCA+AGG | - | Chr1:76453358-76453377 | MsG0180004328.01.T01:CDS | 50.0% | |
| ATGCGAAAGTGGCTCATCCA+TGG | - | Chr1:76453084-76453103 | MsG0180004328.01.T01:CDS | 50.0% | |
| CTCCCATAGCCACATGCAAT+GGG | + | Chr1:76453124-76453143 | None:intergenic | 50.0% | |
| CTGATCCGGGTAAGCAAAGA+TGG | - | Chr1:76452227-76452246 | MsG0180004328.01.T01:CDS | 50.0% | |
| CTTCCCATTGCATGTGGCTA+TGG | - | Chr1:76453118-76453137 | MsG0180004328.01.T01:CDS | 50.0% | |
| GAATCAAATGCCAGAGCCCA+GGG | + | Chr1:76452776-76452795 | None:intergenic | 50.0% | |
| GGGAAGAAATGATCAGGCCA+TGG | + | Chr1:76453104-76453123 | None:intergenic | 50.0% | |
| GGGCTCCAAAGTTAGCAAAG+AGG | - | Chr1:76452474-76452493 | MsG0180004328.01.T01:CDS | 50.0% | |
| GTGGGCTTGATCATGGAACA+TGG | - | Chr1:76452552-76452571 | MsG0180004328.01.T01:intron | 50.0% | |
| ! | GGATGAGCCACTTTCGCATA+TGG | + | Chr1:76453083-76453102 | None:intergenic | 50.0% |
| !! | AGCTCAAGTATCGAGCACCA+GGG | - | Chr1:76452453-76452472 | MsG0180004328.01.T01:CDS | 50.0% |
| !! | TTTGCTAACTTTGGAGCCCC+TGG | + | Chr1:76452473-76452492 | None:intergenic | 50.0% |
| GCTCCCATAGCCACATGCAA+TGG | + | Chr1:76453125-76453144 | None:intergenic | 55.0% | |
| GGAATCAAATGCCAGAGCCC+AGG | + | Chr1:76452777-76452796 | None:intergenic | 55.0% | |
| ! | AGCATCTGGGTTGAGTCGAG+TGG | - | Chr1:76452514-76452533 | MsG0180004328.01.T01:intron | 55.0% |
| ! | GGGCTCTGGCATTTGATTCC+TGG | - | Chr1:76452777-76452796 | MsG0180004328.01.T01:intron | 55.0% |
| !! | CAGCTCAAGTATCGAGCACC+AGG | - | Chr1:76452452-76452471 | MsG0180004328.01.T01:CDS | 55.0% |
| !! | GAAGGCGCCATATGCGAAAG+TGG | - | Chr1:76453073-76453092 | MsG0180004328.01.T01:CDS | 55.0% |
| !! | GCTCAAGTATCGAGCACCAG+GGG | - | Chr1:76452454-76452473 | MsG0180004328.01.T01:CDS | 55.0% |
| AGAAAGCCCTCCTCCTCCCT+GGG | - | Chr1:76452757-76452776 | MsG0180004328.01.T01:intron | 60.0% | |
| CATGTGGCTATGGGAGCTGC+TGG | - | Chr1:76453128-76453147 | MsG0180004328.01.T01:CDS | 60.0% | |
| TCAAATGCCAGAGCCCAGGG+AGG | + | Chr1:76452773-76452792 | None:intergenic | 60.0% | |
| AATGCCAGAGCCCAGGGAGG+AGG | + | Chr1:76452770-76452789 | None:intergenic | 65.0% | |
| GAGAAAGCCCTCCTCCTCCC+TGG | - | Chr1:76452756-76452775 | MsG0180004328.01.T01:intron | 65.0% | |
| GGAGGAGGAGGGCTTTCTCG+AGG | + | Chr1:76452755-76452774 | None:intergenic | 65.0% | |
| CCAGAGCCCAGGGAGGAGGA+GGG | + | Chr1:76452766-76452785 | None:intergenic | 70.0% | |
| CCCTCCTCCTCCCTGGGCTC+TGG | - | Chr1:76452763-76452782 | MsG0180004328.01.T01:intron | 75.0% | |
| GCCAGAGCCCAGGGAGGAGG+AGG | + | Chr1:76452767-76452786 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr1 | gene | 76451559 | 76453402 | 76451559 | ID=MsG0180004328.01;Name=MsG0180004328.01 |
| Chr1 | mRNA | 76451559 | 76453402 | 76451559 | ID=MsG0180004328.01.T01;Parent=MsG0180004328.01;Name=MsG0180004328.01.T01;_AED=0.43;_eAED=0.43;_QI=0|1|0.66|1|1|1|3|161|300 |
| Chr1 | exon | 76451559 | 76451915 | 76451559 | ID=MsG0180004328.01.T01:exon:44834;Parent=MsG0180004328.01.T01 |
| Chr1 | exon | 76452136 | 76452506 | 76452136 | ID=MsG0180004328.01.T01:exon:44833;Parent=MsG0180004328.01.T01 |
| Chr1 | exon | 76453067 | 76453402 | 76453067 | ID=MsG0180004328.01.T01:exon:44832;Parent=MsG0180004328.01.T01 |
| Chr1 | CDS | 76453067 | 76453402 | 76453067 | ID=MsG0180004328.01.T01:cds;Parent=MsG0180004328.01.T01 |
| Chr1 | CDS | 76452136 | 76452506 | 76452136 | ID=MsG0180004328.01.T01:cds;Parent=MsG0180004328.01.T01 |
| Chr1 | CDS | 76451720 | 76451915 | 76451720 | ID=MsG0180004328.01.T01:cds;Parent=MsG0180004328.01.T01 |
| Chr1 | three_prime_UTR | 76451559 | 76451719 | 76451559 | ID=MsG0180004328.01.T01:three_prime_utr;Parent=MsG0180004328.01.T01 |
| Gene Sequence |
| Protein sequence |
