AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580025606.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580025606.01.T01 MTR_5g031390 79.167 360 75 0 1 360 1 360 0.0 584
MsG0580025606.01.T01 MTR_5g031250 78.889 360 76 0 1 360 1 360 0.0 579
MsG0580025606.01.T01 MTR_5g031230 78.333 360 78 0 1 360 1 360 0.0 579
MsG0580025606.01.T01 MTR_4g115300 77.778 360 80 0 1 360 1 360 0.0 572
MsG0580025606.01.T01 MTR_5g031300 77.562 361 80 1 1 360 1 361 0.0 568
MsG0580025606.01.T01 MTR_5g031190 75.278 360 89 0 1 360 1 360 0.0 568
MsG0580025606.01.T01 MTR_5g031305 77.348 362 81 1 1 361 1 362 0.0 568
MsG0580025606.01.T01 MTR_5g031310 77.348 362 81 1 1 361 1 362 0.0 565
MsG0580025606.01.T01 MTR_5g031180 79.444 360 74 0 1 360 1 360 0.0 554
MsG0580025606.01.T01 MTR_8g068190 77.778 360 80 0 1 360 1 360 0.0 554
MsG0580025606.01.T01 MTR_5g031210 76.111 360 86 0 1 360 1 360 0.0 550
MsG0580025606.01.T01 MTR_5g031360 75.284 352 87 0 10 361 12 363 0.0 542
MsG0580025606.01.T01 MTR_8g092630 62.745 357 127 2 8 359 60 415 4.30e-153 437
MsG0580025606.01.T01 MTR_5g031430 63.478 345 126 0 14 358 14 358 1.04e-150 429
MsG0580025606.01.T01 MTR_1g025950 60.172 349 138 1 8 355 7 355 3.89e-144 412
MsG0580025606.01.T01 MTR_5g031250 79.668 241 49 0 1 241 1 241 9.97e-136 387
MsG0580025606.01.T01 MTR_1g107425 53.353 343 160 0 11 353 9 351 4.32e-124 361
MsG0580025606.01.T01 MTR_2g009810 54.913 346 154 2 14 358 62 406 1.78e-121 357
MsG0580025606.01.T01 MTR_1g107425 53.819 288 133 0 11 298 9 296 7.23e-100 298
MsG0580025606.01.T01 MTR_5g031290 96.522 115 4 0 247 361 80 194 3.54e-73 226
MsG0580025606.01.T01 MTR_5g031290 96.250 80 2 1 1 79 1 80 4.66e-50 166
MsG0580025606.01.T01 MTR_2g009820 51.012 247 117 3 116 358 8 254 4.06e-66 210
MsG0580025606.01.T01 MTR_8g095220 27.273 297 184 10 10 278 51 343 2.21e-20 92.0
MsG0580025606.01.T01 MTR_8g095220 28.516 256 156 7 10 242 51 302 5.87e-20 89.7
MsG0580025606.01.T01 MTR_3g089977 23.797 374 249 11 11 354 12 379 1.16e-18 86.7
MsG0580025606.01.T01 MTR_3g089940 24.176 364 241 10 11 344 12 370 1.23e-18 86.7
MsG0580025606.01.T01 MTR_3g089940 23.901 364 242 10 11 344 12 370 2.13e-18 85.9
MsG0580025606.01.T01 MTR_3g089940 24.398 332 224 8 11 319 12 339 6.63e-17 81.3
MsG0580025606.01.T01 MTR_3g089970 23.757 362 241 10 13 344 15 371 7.79e-17 81.3
MsG0580025606.01.T01 MTR_3g089940 24.096 332 225 8 11 319 12 339 1.21e-16 80.5
MsG0580025606.01.T01 MTR_0001s0660 25.948 343 223 12 38 353 35 373 5.33e-16 79.3
MsG0580025606.01.T01 MTR_1g069430 24.629 337 223 10 1 312 1 331 7.39e-14 72.4
MsG0580025606.01.T01 MTR_5g045710 24.925 333 211 12 38 338 35 360 7.97e-14 72.4
MsG0580025606.01.T01 MTR_7g068320 25.852 352 195 16 39 341 48 382 1.97e-12 68.2
MsG0580025606.01.T01 MTR_7g068330 27.616 344 198 19 39 341 41 374 9.73e-12 66.2
MsG0580025606.01.T01 MTR_7g099040 23.547 327 219 9 11 312 13 333 9.90e-12 66.2
MsG0580025606.01.T01 MTR_3g099460 23.913 322 189 11 39 319 37 343 6.51e-11 63.5
MsG0580025606.01.T01 MTR_3g099460 23.913 322 189 11 39 319 44 350 6.67e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580025606.01.T01 AT4G37990 71.225 351 101 0 11 361 7 357 9.91e-172 482
MsG0580025606.01.T01 AT4G37980 69.231 351 108 0 11 361 7 357 2.17e-171 481
MsG0580025606.01.T01 AT4G39330 65.266 357 124 0 1 357 1 357 3.33e-170 479
MsG0580025606.01.T01 AT4G37970 63.920 352 127 0 6 357 7 358 2.10e-166 469
MsG0580025606.01.T01 AT2G21890 61.383 347 133 1 12 357 6 352 1.86e-155 442
MsG0580025606.01.T01 AT2G21730 61.782 348 131 2 12 357 6 353 1.26e-154 440
MsG0580025606.01.T01 AT4G39330 64.452 301 107 0 1 301 1 301 2.40e-137 393
MsG0580025606.01.T01 AT4G37980 68.990 287 89 0 11 297 7 293 2.21e-133 383
MsG0580025606.01.T01 AT4G37970 62.284 289 109 0 6 294 7 295 1.49e-127 368
MsG0580025606.01.T01 AT1G72680 52.770 343 161 1 16 358 14 355 5.92e-120 351
MsG0580025606.01.T01 AT3G19450 52.023 346 166 0 11 356 9 354 4.99e-113 333
MsG0580025606.01.T01 AT4G34230 52.023 346 166 0 8 353 5 350 2.11e-103 309
MsG0580025606.01.T01 AT4G34230 51.734 346 167 0 8 353 5 350 1.66e-102 306
MsG0580025606.01.T01 AT4G37970 61.667 240 92 0 6 245 7 246 2.96e-102 302
MsG0580025606.01.T01 AT4G37970 62.025 237 90 0 6 242 7 243 2.53e-101 300
MsG0580025606.01.T01 AT5G63620 25.172 290 189 7 15 278 58 345 1.29e-18 87.0
MsG0580025606.01.T01 AT5G63620 25.172 290 189 7 15 278 58 345 1.45e-18 87.0
MsG0580025606.01.T01 AT5G63620 26.506 249 160 5 15 242 58 304 5.55e-18 84.0
MsG0580025606.01.T01 AT5G43940 25.519 337 220 10 1 312 1 331 2.28e-17 83.2
MsG0580025606.01.T01 AT5G43940 25.418 299 195 8 39 312 48 343 3.56e-16 79.7
MsG0580025606.01.T01 AT1G77120 22.977 383 261 12 1 354 1 378 5.28e-16 79.0
MsG0580025606.01.T01 AT1G22430 26.756 299 184 11 39 307 42 335 6.91e-16 78.6
MsG0580025606.01.T01 AT1G22430 26.756 299 184 11 39 307 42 335 6.91e-16 78.6
MsG0580025606.01.T01 AT1G32780 25.278 360 226 12 39 358 37 393 1.16e-15 78.2
MsG0580025606.01.T01 AT1G22440 26.578 301 182 11 39 307 40 333 2.10e-15 77.4
MsG0580025606.01.T01 AT1G64710 23.988 346 229 11 1 318 1 340 1.86e-14 74.3
MsG0580025606.01.T01 AT1G22430 28.643 199 123 6 39 219 42 239 2.24e-14 73.6
MsG0580025606.01.T01 AT1G22430 28.643 199 123 6 39 219 42 239 2.95e-14 72.8
MsG0580025606.01.T01 AT1G22430 28.643 199 123 6 39 219 42 239 2.95e-14 72.8
MsG0580025606.01.T01 AT1G64710 24.026 308 203 10 39 318 13 317 6.86e-14 72.4
MsG0580025606.01.T01 AT4G22110 26.045 311 171 12 39 307 43 336 4.54e-13 70.1
MsG0580025606.01.T01 AT4G22110 26.045 311 171 12 39 307 43 336 4.54e-13 70.1
MsG0580025606.01.T01 AT4G22110 29.143 175 106 4 39 196 43 216 1.66e-12 67.4

Find 122 sgRNAs with CRISPR-Local

Find 267 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTATTACTTATTGAAATTTA+AGG 0.126068 5:-21189652 None:intergenic
TATAGCCCTCTTATATATTA+TGG 0.179321 5:+21188771 MsG0580025606.01.T01:CDS
AAACTTAGCAAATGTTTATT+TGG 0.189569 5:-21189706 None:intergenic
GTAAAATTTGCCAAAGCTTT+TGG 0.190975 5:+21188855 MsG0580025606.01.T01:CDS
TTCTTTGGATGCTCGTATTC+AGG 0.221302 5:-21186008 None:intergenic
TCATGTGGGCGTGGTTGGCC+TGG 0.238804 5:+21188812 MsG0580025606.01.T01:CDS
GCCCAACCAAAGGCCTTCTT+TGG 0.253742 5:-21186023 None:intergenic
CCTGGGTGGGTTGGGCCATA+TGG 0.283320 5:+21188830 MsG0580025606.01.T01:CDS
GTAAATCAATTAAGGGTAAG+AGG 0.298660 5:-21189199 None:intergenic
TATTACTTATTGAAATTTAA+GGG 0.308564 5:-21189651 None:intergenic
ATCTCATGGAAAGCTTATAT+TGG 0.315937 5:+21189226 MsG0580025606.01.T01:CDS
GGTAACTCAAGAGGCTTCTC+TGG 0.316744 5:-21189257 None:intergenic
GTGGTTGGCCTGGGTGGGTT+GGG 0.344708 5:+21188822 MsG0580025606.01.T01:CDS
GGATGTGCCCCATCCGTTCT+TGG 0.349233 5:-21187291 None:intergenic
CTTATCAATAAAGCATATAA+TGG 0.354113 5:+21189870 MsG0580025606.01.T01:three_prime_UTR
CAAGACTGTCATCACAATCT+TGG 0.357268 5:-21188575 None:intergenic
AAACCTTACCCTGGAACTAA+TGG 0.359391 5:-21187320 None:intergenic
CGTGGTTGGCCTGGGTGGGT+TGG 0.370033 5:+21188821 MsG0580025606.01.T01:CDS
TAAACCTGTTCTTTGCTAGA+TGG 0.370336 5:-21189941 None:intergenic
CATGTGGGCGTGGTTGGCCT+GGG 0.371297 5:+21188813 MsG0580025606.01.T01:CDS
ATAGGTATAACTTCAATATC+AGG 0.375109 5:-21189538 None:intergenic
ATGGTATACAAAGGTAAATA+TGG 0.381320 5:-21189922 None:intergenic
CACATTAACTCCAAAAGCTT+TGG 0.387902 5:-21188865 None:intergenic
TTAGAAATGAATCAGCTTTG+AGG 0.399461 5:-21188935 None:intergenic
GCATCAAGTGGTAAGGCATT+AGG 0.409198 5:-21188714 None:intergenic
CCCCTTTCAATTTCTCCAGA+AGG 0.415467 5:+21186072 MsG0580025606.01.T01:CDS
CTAGGCTGCAACGGGGACTT+TGG 0.420020 5:+21189142 MsG0580025606.01.T01:intron
GGTCTTCATGTGGGCGTGGT+TGG 0.427618 5:+21188807 MsG0580025606.01.T01:CDS
CCCACTCATCATGGTATCAA+TGG 0.428491 5:-21189811 None:intergenic
TCCAAAGAAGGCCTTTGGTT+GGG 0.430490 5:+21186022 MsG0580025606.01.T01:CDS
TAGTGGAATGGGAGGGATGA+AGG 0.430679 5:+21189471 MsG0580025606.01.T01:CDS
GTGGGCGTGGTTGGCCTGGG+TGG 0.434852 5:+21188816 MsG0580025606.01.T01:CDS
TCCACCTACCCATTAGTTCC+AGG 0.440028 5:+21187311 MsG0580025606.01.T01:CDS
TTGAGTCCATAATATATAAG+AGG 0.440641 5:-21188777 None:intergenic
TATACCATCTAGCAAAGAAC+AGG 0.441259 5:+21189937 MsG0580025606.01.T01:three_prime_UTR
AGGGCTATAAACAGTGATTC+CGG 0.443059 5:-21188757 None:intergenic
TGATTTACCTGCATTTGATC+CGG 0.443468 5:-21188969 None:intergenic
ATGGTAGCTGGTAGTGGAAT+GGG 0.444794 5:+21189460 MsG0580025606.01.T01:CDS
TTAGCAAATGTTTATTTGGA+AGG 0.454415 5:-21189702 None:intergenic
GAGCATCCAAAGAAGGCCTT+TGG 0.455342 5:+21186017 MsG0580025606.01.T01:CDS
ACAAAATTTATACTGACATA+TGG 0.456413 5:+21188609 MsG0580025606.01.T01:CDS
ATTTCTAATTAGCCGTGATC+CGG 0.457200 5:+21188950 MsG0580025606.01.T01:CDS
AACCTTACCCTGGAACTAAT+GGG 0.457495 5:-21187319 None:intergenic
TGGGCAGCTAGAGATCCTTC+TGG 0.459135 5:+21186041 MsG0580025606.01.T01:CDS
TATCGATTTGTGATTGACAT+TGG 0.459329 5:+21189610 MsG0580025606.01.T01:CDS
ATTGATTTACTAAAATCTCA+TGG 0.460124 5:+21189212 MsG0580025606.01.T01:CDS
TGATATTGAAGTTATACCTA+TGG 0.461411 5:+21189540 MsG0580025606.01.T01:CDS
TGTAATATGATTGCTATTGA+CGG 0.462495 5:+21189748 MsG0580025606.01.T01:three_prime_UTR
CATGGAAAGCTTATATTGGT+TGG 0.464638 5:+21189230 MsG0580025606.01.T01:CDS
GTGGTAAGGCATTAGGTATA+CGG 0.469075 5:-21188707 None:intergenic
GTGGGTGTGGGATGCTTAGT+TGG 0.470176 5:+21188537 MsG0580025606.01.T01:CDS
AGTGATGGAAGTATCACATA+TGG 0.490148 5:+21188642 MsG0580025606.01.T01:CDS
CATTCAAAGTGTTGTACTGC+GGG 0.490748 5:+21187243 MsG0580025606.01.T01:CDS
AATTACAGGCACGAAATTGT+TGG 0.492254 5:+21188462 MsG0580025606.01.T01:intron
TGGGCGTGGTTGGCCTGGGT+GGG 0.494411 5:+21188817 MsG0580025606.01.T01:CDS
TTTGTAATCCCCACTCATCA+TGG 0.496119 5:-21189820 None:intergenic
TCCACATGGCCAAGAACGGA+TGG 0.501341 5:+21187282 MsG0580025606.01.T01:CDS
ATATGCTTACCCACTAGTAA+AGG 0.502268 5:-21189287 None:intergenic
TAAATCAATTAAGGGTAAGA+GGG 0.507622 5:-21189198 None:intergenic
AATGGTAGCTGGTAGTGGAA+TGG 0.509954 5:+21189459 MsG0580025606.01.T01:CDS
GTTGCTCCTCTCCTTTGCGC+CGG 0.514121 5:+21188738 MsG0580025606.01.T01:CDS
AACCTTCTGGAGAAATTGAA+AGG 0.514629 5:-21186074 None:intergenic
GTAACTCAAGAGGCTTCTCT+GGG 0.518573 5:-21189256 None:intergenic
ACCTTCTGGAGAAATTGAAA+GGG 0.532153 5:-21186073 None:intergenic
ATCCAAAGAAGGCCTTTGGT+TGG 0.536152 5:+21186021 MsG0580025606.01.T01:CDS
CACATGGCCAAGAACGGATG+GGG 0.541448 5:+21187284 MsG0580025606.01.T01:CDS
GCTGCAACGGGGACTTTGGA+TGG 0.542104 5:+21189146 MsG0580025606.01.T01:CDS
CCTGCATTTGATCCGGATCA+CGG 0.544959 5:-21188962 None:intergenic
CCATTGATACCATGATGAGT+GGG 0.549434 5:+21189811 MsG0580025606.01.T01:three_prime_UTR
TGAATACGAGCATCCAAAGA+AGG 0.550894 5:+21186010 MsG0580025606.01.T01:CDS
CCGTGATCCGGATCAAATGC+AGG 0.557363 5:+21188962 MsG0580025606.01.T01:CDS
CAACAAGCCTGGTCTTCATG+TGG 0.557723 5:+21188797 MsG0580025606.01.T01:CDS
GGCGCAAAGGAGAGGAGCAA+CGG 0.560469 5:-21188736 None:intergenic
TTTCAAAGTTGATGACAAAG+TGG 0.561295 5:+21188518 MsG0580025606.01.T01:CDS
TATTATGGACTCAACAAGCC+TGG 0.561737 5:+21188786 MsG0580025606.01.T01:CDS
CCACATGGCCAAGAACGGAT+GGG 0.561885 5:+21187283 MsG0580025606.01.T01:CDS
GCCTGGTCTTCATGTGGGCG+TGG 0.564812 5:+21188803 MsG0580025606.01.T01:CDS
CGTTGTTGAAGTTATTGAAG+AGG 0.565084 5:-21189898 None:intergenic
TTCAAAGTTGATGACAAAGT+GGG 0.565826 5:+21188519 MsG0580025606.01.T01:CDS
AGCAACGGCATCAAGTGGTA+AGG 0.566534 5:-21188721 None:intergenic
ACCAGCGTGGCCTTTACTAG+TGG 0.568131 5:+21189277 MsG0580025606.01.T01:CDS
ATCCGTTCTTGGCCATGTGG+AGG 0.568436 5:-21187280 None:intergenic
AGTTGATGACAAAGTGGGTG+TGG 0.569131 5:+21188524 MsG0580025606.01.T01:CDS
CCCTGGAACTAATGGGTAGG+TGG 0.570055 5:-21187312 None:intergenic
CCAGCGTGGCCTTTACTAGT+GGG 0.573900 5:+21189278 MsG0580025606.01.T01:CDS
ACCACGCCCACATGAAGACC+AGG 0.576005 5:-21188804 None:intergenic
ATCTCTAGCTGCCCAACCAA+AGG 0.576625 5:-21186033 None:intergenic
TGTTGAAGTTATTGAAGAGG+AGG 0.577404 5:-21189895 None:intergenic
AAACAGTGATTCCGGCGCAA+AGG 0.583315 5:-21188749 None:intergenic
TATGGTGCTAAATATAGTGA+TGG 0.589474 5:+21188627 MsG0580025606.01.T01:CDS
TCCATTGATACCATGATGAG+TGG 0.590060 5:+21189810 MsG0580025606.01.T01:three_prime_UTR
GACCTCCACATGGCCAAGAA+CGG 0.590217 5:+21187278 MsG0580025606.01.T01:CDS
AACAAGCCTGGTCTTCATGT+GGG 0.590776 5:+21188798 MsG0580025606.01.T01:CDS
GTGATTCCGGCGCAAAGGAG+AGG 0.596204 5:-21188744 None:intergenic
TGAGTCCATAATATATAAGA+GGG 0.600060 5:-21188776 None:intergenic
GTAGCTGGTAGTGGAATGGG+AGG 0.609728 5:+21189463 MsG0580025606.01.T01:CDS
GCTGTATTGACATAATCCAT+AGG 0.609776 5:-21189556 None:intergenic
CCCATCCGTTCTTGGCCATG+TGG 0.610999 5:-21187283 None:intergenic
CCATATGGCCCAACCCACCC+AGG 0.614779 5:-21188830 None:intergenic
GGATTATGTCAATACAGCAA+TGG 0.623261 5:+21189561 MsG0580025606.01.T01:CDS
GTTGGTGTAGTGACTGAGGT+GGG 0.627215 5:+21188480 MsG0580025606.01.T01:CDS
TGGAGGCTACTCTGACTCGA+TGG 0.628568 5:+21188662 MsG0580025606.01.T01:CDS
CCACCTACCCATTAGTTCCA+GGG 0.631579 5:+21187312 MsG0580025606.01.T01:CDS
AAAGGGGAGAGAACACCAGA+AGG 0.635132 5:-21186056 None:intergenic
CCCACTAGTAAAGGCCACGC+TGG 0.637649 5:-21189278 None:intergenic
GATGGAAGTATCACATATGG+AGG 0.637694 5:+21188645 MsG0580025606.01.T01:CDS
GTTGATGACAAAGTGGGTGT+GGG 0.640763 5:+21188525 MsG0580025606.01.T01:CDS
GGCCACGCTGGTAACTCAAG+AGG 0.647576 5:-21189266 None:intergenic
AGAGGAGCAACGGCATCAAG+TGG 0.648951 5:-21188726 None:intergenic
ATGCCACACGGACCTCCACA+TGG 0.649847 5:+21187268 MsG0580025606.01.T01:CDS
CTTTGCTAGATGGTATACAA+AGG 0.652907 5:-21189931 None:intergenic
CCTTCTGGAGAAATTGAAAG+GGG 0.653235 5:-21186072 None:intergenic
TGTTGGTGTAGTGACTGAGG+TGG 0.664351 5:+21188479 MsG0580025606.01.T01:CDS
TTACCCTGGAACTAATGGGT+AGG 0.664593 5:-21187315 None:intergenic
CATTGATACCATGATGAGTG+GGG 0.670821 5:+21189812 MsG0580025606.01.T01:three_prime_UTR
GTACTGCGGGATATGCCACA+CGG 0.688920 5:+21187256 MsG0580025606.01.T01:CDS
GCATTCAAAGTGTTGTACTG+CGG 0.697031 5:+21187242 MsG0580025606.01.T01:CDS
TAGCTGGTAGTGGAATGGGA+GGG 0.704913 5:+21189464 MsG0580025606.01.T01:CDS
TGGCCATGTGGAGGTCCGTG+TGG 0.712135 5:-21187271 None:intergenic
AATTGTTGGTGTAGTGACTG+AGG 0.753175 5:+21188476 MsG0580025606.01.T01:CDS
TAACTCAAGAGGCTTCTCTG+GGG 0.766100 5:-21189255 None:intergenic
AGCCTCTTGAGTTACCAGCG+TGG 0.780200 5:+21189264 MsG0580025606.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATTTAGTCAATTATAAAT+TGG - Chr5:21187593-21187612 None:intergenic 10.0%
!! AATTTAGTCAATTATAAATT+GGG - Chr5:21187592-21187611 None:intergenic 10.0%
!! CTATAAAAAGTAAATTTAAT+AGG - Chr5:21187200-21187219 None:intergenic 10.0%
!! TAAAAGATCAAATAAAAATA+AGG + Chr5:21189844-21189863 MsG0580025606.01.T01:three_prime_UTR 10.0%
!! TACTAGTTAAATATTTATTA+TGG - Chr5:21186532-21186551 None:intergenic 10.0%
!! TATTACTTATTGAAATTTAA+GGG - Chr5:21189654-21189673 None:intergenic 10.0%
!! TTATTACTTATTGAAATTTA+AGG - Chr5:21189655-21189674 None:intergenic 10.0%
!!! CTATTAAATTTACTTTTTAT+AGG + Chr5:21187198-21187217 MsG0580025606.01.T01:intron 10.0%
!! AAATTAGTAGTATTAATTAG+GGG + Chr5:21187038-21187057 MsG0580025606.01.T01:intron 15.0%
!! AAGGTAAAATAATTTATGTT+TGG - Chr5:21187683-21187702 None:intergenic 15.0%
!! AATAAATGTATAAAATGAAG+AGG - Chr5:21186107-21186126 None:intergenic 15.0%
!! AATAATCATCATGATTATAA+GGG - Chr5:21186863-21186882 None:intergenic 15.0%
!! ACAAATTAGTAGTATTAATT+AGG + Chr5:21187036-21187055 MsG0580025606.01.T01:intron 15.0%
!! ATCAAAAAAAAAAAAAATCC+AGG + Chr5:21186404-21186423 MsG0580025606.01.T01:intron 15.0%
!! ATTTAGTCAATTATAAATTG+GGG - Chr5:21187591-21187610 None:intergenic 15.0%
!! CAAATTAGTAGTATTAATTA+GGG + Chr5:21187037-21187056 MsG0580025606.01.T01:intron 15.0%
!! TAATAATCATCATGATTATA+AGG - Chr5:21186864-21186883 None:intergenic 15.0%
!!! AATTATCATTAATTTTTCGA+TGG + Chr5:21186613-21186632 MsG0580025606.01.T01:intron 15.0%
!!! AGATTTTAGTAAATCAATTA+AGG - Chr5:21189210-21189229 None:intergenic 15.0%
!!! ATAAATGTTGATAATTTTCT+AGG + Chr5:21189124-21189143 MsG0580025606.01.T01:intron 15.0%
!!! ATTTGAAGTAACAATTAAAT+AGG + Chr5:21186355-21186374 MsG0580025606.01.T01:intron 15.0%
!!! GATTTTAGTAAATCAATTAA+GGG - Chr5:21189209-21189228 None:intergenic 15.0%
!!! GTATATTTTTTTTTTCAACT+CGG + Chr5:21189013-21189032 MsG0580025606.01.T01:intron 15.0%
!!! TAATATTTTGATGTATTGTA+GGG + Chr5:21189431-21189450 MsG0580025606.01.T01:intron 15.0%
!!! TTAATATTTTGATGTATTGT+AGG + Chr5:21189430-21189449 MsG0580025606.01.T01:intron 15.0%
!!! TTTATTAACATTTTGTTTCA+TGG + Chr5:21187347-21187366 MsG0580025606.01.T01:intron 15.0%
!! AAAAAAAATATACATAGACC+TGG - Chr5:21189006-21189025 None:intergenic 20.0%
!! AAACTTAGCAAATGTTTATT+TGG - Chr5:21189709-21189728 None:intergenic 20.0%
!! AACTCTACTTATATAAGTAA+CGG + Chr5:21187389-21187408 MsG0580025606.01.T01:intron 20.0%
!! AAGGAAAAAATTTATCACAA+AGG - Chr5:21186834-21186853 None:intergenic 20.0%
!! AATAGGAACAAAAAATTTCT+AGG + Chr5:21186372-21186391 MsG0580025606.01.T01:intron 20.0%
!! AATTGTAGTATAAAAGATGT+TGG - Chr5:21188283-21188302 None:intergenic 20.0%
!! ACAAAATTTATACTGACATA+TGG + Chr5:21188609-21188628 MsG0580025606.01.T01:CDS 20.0%
!! AGAACATATCTTAGTTAAAT+AGG + Chr5:21189327-21189346 MsG0580025606.01.T01:intron 20.0%
!! ATTATTAACATGGGATAATT+TGG - Chr5:21187826-21187845 None:intergenic 20.0%
!! CACTTTAGATCTAAATAATT+AGG - Chr5:21186807-21186826 None:intergenic 20.0%
!! CATTCAATTATTAGATAAAC+AGG - Chr5:21187487-21187506 None:intergenic 20.0%
!! CTAATAAGTTAAACATTACT+CGG + Chr5:21188074-21188093 MsG0580025606.01.T01:intron 20.0%
!! CTTATCAATAAAGCATATAA+TGG + Chr5:21189870-21189889 MsG0580025606.01.T01:three_prime_UTR 20.0%
!! GATACATTAATCTATTAGAA+AGG - Chr5:21187661-21187680 None:intergenic 20.0%
!! GGACAAAAATAAAATCAAAT+GGG + Chr5:21187120-21187139 MsG0580025606.01.T01:intron 20.0%
!! TGATAGCTAAAAATGAAAAA+GGG + Chr5:21186431-21186450 MsG0580025606.01.T01:intron 20.0%
!! TTTAGATCTAAATAATTAGG+TGG - Chr5:21186804-21186823 None:intergenic 20.0%
!! TTTAGTCAATTATAAATTGG+GGG - Chr5:21187590-21187609 None:intergenic 20.0%
!! TTTATTACACAAACAAACAA+AGG - Chr5:21186995-21187014 None:intergenic 20.0%
!! TTTCACTTCAAACAATTTAA+AGG + Chr5:21187790-21187809 MsG0580025606.01.T01:intron 20.0%
!!! AATGAATTTGTTTTGGTAAT+CGG - Chr5:21188419-21188438 None:intergenic 20.0%
!!! AGTACTATTACATTTTTGTT+TGG + Chr5:21186548-21186567 MsG0580025606.01.T01:intron 20.0%
!!! ATTGATTTACTAAAATCTCA+TGG + Chr5:21189212-21189231 MsG0580025606.01.T01:CDS 20.0%
!!! TGGATTTTTTTTTAAAACGT+TGG - Chr5:21188263-21188282 None:intergenic 20.0%
!!! TTGTGATAAATTTTTTCCTT+GGG + Chr5:21186834-21186853 MsG0580025606.01.T01:intron 20.0%
!!! TTTGTGATAAATTTTTTCCT+TGG + Chr5:21186833-21186852 MsG0580025606.01.T01:intron 20.0%
! AAAGATAACTTCGTATTTAC+AGG + Chr5:21187766-21187785 MsG0580025606.01.T01:intron 25.0%
! AAATCATTTAATCTCTGCTA+AGG + Chr5:21186647-21186666 MsG0580025606.01.T01:intron 25.0%
! AAGAAATGTGAAAAAAGCAA+AGG - Chr5:21186913-21186932 None:intergenic 25.0%
! ACATTAATCTATTAGAAAGG+AGG - Chr5:21187658-21187677 None:intergenic 25.0%
! AGAAATGTGAAAAAAGCAAA+GGG - Chr5:21186912-21186931 None:intergenic 25.0%
! AGACCTAACAATTATTAACA+TGG - Chr5:21187836-21187855 None:intergenic 25.0%
! ATAGGTATAACTTCAATATC+AGG - Chr5:21189541-21189560 None:intergenic 25.0%
! ATCCCATGTTAATAATTGTT+AGG + Chr5:21187830-21187849 MsG0580025606.01.T01:intron 25.0%
! ATGCATCTAGTAATTTGAAA+CGG + Chr5:21187084-21187103 MsG0580025606.01.T01:intron 25.0%
! ATGGTATACAAAGGTAAATA+TGG - Chr5:21189925-21189944 None:intergenic 25.0%
! ATTAATCTATTAGAAAGGAG+GGG - Chr5:21187656-21187675 None:intergenic 25.0%
! CAAAAATAAAATCAAATGGG+TGG + Chr5:21187123-21187142 MsG0580025606.01.T01:intron 25.0%
! CATTAATCTATTAGAAAGGA+GGG - Chr5:21187657-21187676 None:intergenic 25.0%
! GAATATATCAGTCATACATA+TGG + Chr5:21187411-21187430 MsG0580025606.01.T01:intron 25.0%
! GACCTAACAATTATTAACAT+GGG - Chr5:21187835-21187854 None:intergenic 25.0%
! GGGACAAAAATAAAATCAAA+TGG + Chr5:21187119-21187138 MsG0580025606.01.T01:intron 25.0%
! GTGATAGCTAAAAATGAAAA+AGG + Chr5:21186430-21186449 MsG0580025606.01.T01:intron 25.0%
! TAAATCAATTAAGGGTAAGA+GGG - Chr5:21189201-21189220 None:intergenic 25.0%
! TAAATCACATATATATGTCC+AGG + Chr5:21188985-21189004 MsG0580025606.01.T01:intron 25.0%
! TATAGCCCTCTTATATATTA+TGG + Chr5:21188771-21188790 MsG0580025606.01.T01:CDS 25.0%
! TCAAACTAAATCATTTGAGA+CGG + Chr5:21188364-21188383 MsG0580025606.01.T01:intron 25.0%
! TGAGTCCATAATATATAAGA+GGG - Chr5:21188779-21188798 None:intergenic 25.0%
! TGATATTGAAGTTATACCTA+TGG + Chr5:21189540-21189559 MsG0580025606.01.T01:CDS 25.0%
! TGTCTATGTTAGTATTTCAT+AGG + Chr5:21189088-21189107 MsG0580025606.01.T01:intron 25.0%
! TTAGCAAATGTTTATTTGGA+AGG - Chr5:21189705-21189724 None:intergenic 25.0%
! TTCATTTCCATTCTAACAAT+CGG + Chr5:21188433-21188452 MsG0580025606.01.T01:intron 25.0%
! TTGAGTCCATAATATATAAG+AGG - Chr5:21188780-21188799 None:intergenic 25.0%
! TTTAGCTAAAAGTGACTAAA+AGG - Chr5:21187702-21187721 None:intergenic 25.0%
!! AAGTAGAGTTTTCTTAAACA+TGG - Chr5:21187379-21187398 None:intergenic 25.0%
!! ACTTATTCCTCAAAATGTTT+TGG - Chr5:21186480-21186499 None:intergenic 25.0%
!! CGAGTAATGTTTAACTTATT+AGG - Chr5:21188076-21188095 None:intergenic 25.0%
!! TATTAATTAGGGGTATGTTT+AGG + Chr5:21187048-21187067 MsG0580025606.01.T01:intron 25.0%
!! TATTTTCTAACCGTGATTTA+GGG + Chr5:21187890-21187909 MsG0580025606.01.T01:intron 25.0%
!! TGTAATATGATTGCTATTGA+CGG + Chr5:21189748-21189767 MsG0580025606.01.T01:three_prime_UTR 25.0%
!!! AATTGTTAGGTCTTTTTTAG+AGG + Chr5:21187843-21187862 MsG0580025606.01.T01:intron 25.0%
!!! AGCTCTAAAAGATGATATTT+GGG + Chr5:21187547-21187566 MsG0580025606.01.T01:intron 25.0%
!!! GAATGGAAATGAATTTGTTT+TGG - Chr5:21188426-21188445 None:intergenic 25.0%
AAATGTGAAAAAAGCAAAGG+GGG - Chr5:21186910-21186929 None:intergenic 30.0%
AATCATTAGTCCCTAAATCA+CGG - Chr5:21187903-21187922 None:intergenic 30.0%
ACAATCGGTATAAGAATTAC+AGG + Chr5:21188448-21188467 MsG0580025606.01.T01:intron 30.0%
ACATTACTCGGTACTTTATT+AGG + Chr5:21188086-21188105 MsG0580025606.01.T01:intron 30.0%
AGATATGCAAACATTAGAGA+TGG + Chr5:21186182-21186201 MsG0580025606.01.T01:intron 30.0%
ATCTCATGGAAAGCTTATAT+TGG + Chr5:21189226-21189245 MsG0580025606.01.T01:CDS 30.0%
ATGTATTGTAGGGAGAAAAA+TGG + Chr5:21189441-21189460 MsG0580025606.01.T01:intron 30.0%
GAAATGTGAAAAAAGCAAAG+GGG - Chr5:21186911-21186930 None:intergenic 30.0%
GTAAATCAATTAAGGGTAAG+AGG - Chr5:21189202-21189221 None:intergenic 30.0%
TACATCACCAAACAAAAAGA+AGG + Chr5:21188899-21188918 MsG0580025606.01.T01:CDS 30.0%
TACTCACAAGAGAAGAAAAT+TGG + Chr5:21187987-21188006 MsG0580025606.01.T01:intron 30.0%
TGCTGAAATTAAATGCAACT+TGG - Chr5:21186312-21186331 None:intergenic 30.0%
TTAGAAATGAATCAGCTTTG+AGG - Chr5:21188938-21188957 None:intergenic 30.0%
! ATTGCTTCCTTCTTTTTGTT+TGG - Chr5:21188909-21188928 None:intergenic 30.0%
! CTATTTTCTAACCGTGATTT+AGG + Chr5:21187889-21187908 MsG0580025606.01.T01:intron 30.0%
! GTAAAATTTGCCAAAGCTTT+TGG + Chr5:21188855-21188874 MsG0580025606.01.T01:CDS 30.0%
! TATGGTGCTAAATATAGTGA+TGG + Chr5:21188627-21188646 MsG0580025606.01.T01:CDS 30.0%
! TCTTATACCGATTGTTAGAA+TGG - Chr5:21188443-21188462 None:intergenic 30.0%
! TGCATCTAGTAATTTGAAAC+GGG + Chr5:21187085-21187104 MsG0580025606.01.T01:intron 30.0%
! TTTGTTTGCTACTGTTGTAT+TGG - Chr5:21186255-21186274 None:intergenic 30.0%
!! GAGCTCTAAAAGATGATATT+TGG + Chr5:21187546-21187565 MsG0580025606.01.T01:intron 30.0%
!! TATCGATTTGTGATTGACAT+TGG + Chr5:21189610-21189629 MsG0580025606.01.T01:CDS 30.0%
!! TTCAAAGTTGATGACAAAGT+GGG + Chr5:21188519-21188538 MsG0580025606.01.T01:CDS 30.0%
!! TTTCAAAGTTGATGACAAAG+TGG + Chr5:21188518-21188537 MsG0580025606.01.T01:CDS 30.0%
!! TTTGGACTTTTTGAGAGATT+AGG - Chr5:21186714-21186733 None:intergenic 30.0%
!!! ATTTTTAGCTATCACTTTCC+TGG - Chr5:21186425-21186444 None:intergenic 30.0%
!!! TTCCTCAAAATGTTTTGGTT+AGG - Chr5:21186475-21186494 None:intergenic 30.0%
!!! TTTACTTTTTATAGGGAGAC+AGG + Chr5:21187206-21187225 MsG0580025606.01.T01:intron 30.0%
!!! TTTTTTTTCAACTCGGTATC+TGG + Chr5:21189020-21189039 MsG0580025606.01.T01:intron 30.0%
AATGTGAAAAAAGCAAAGGG+GGG - Chr5:21186909-21186928 None:intergenic 35.0%
AATTACAGGCACGAAATTGT+TGG + Chr5:21188462-21188481 MsG0580025606.01.T01:intron 35.0%
ATAAAGTAGAAACCTTACCC+TGG - Chr5:21187332-21187351 None:intergenic 35.0%
ATATGCTTACCCACTAGTAA+AGG - Chr5:21189290-21189309 None:intergenic 35.0%
ATTTCTAATTAGCCGTGATC+CGG + Chr5:21188950-21188969 MsG0580025606.01.T01:CDS 35.0%
CAAACAAACAAAGGACAGTT+TGG - Chr5:21186986-21187005 None:intergenic 35.0%
CAAATGGGTGGTTACATTAA+GGG + Chr5:21187135-21187154 MsG0580025606.01.T01:intron 35.0%
CACATTAACTCCAAAAGCTT+TGG - Chr5:21188868-21188887 None:intergenic 35.0%
CATGGAAAGCTTATATTGGT+TGG + Chr5:21189230-21189249 MsG0580025606.01.T01:CDS 35.0%
CGGTTAGAAAATAGACGATT+AGG - Chr5:21187883-21187902 None:intergenic 35.0%
CGTTGTTGAAGTTATTGAAG+AGG - Chr5:21189901-21189920 None:intergenic 35.0%
CTTTGCTAGATGGTATACAA+AGG - Chr5:21189934-21189953 None:intergenic 35.0%
GATAAAAGAGTCATATGTGG+AGG - Chr5:21186782-21186801 None:intergenic 35.0%
GGAAAATACATACTATCTGC+AGG + Chr5:21186203-21186222 MsG0580025606.01.T01:intron 35.0%
GGATTATGTCAATACAGCAA+TGG + Chr5:21189561-21189580 MsG0580025606.01.T01:CDS 35.0%
GTGGATAAAAGAGTCATATG+TGG - Chr5:21186785-21186804 None:intergenic 35.0%
TAAACCTGTTCTTTGCTAGA+TGG - Chr5:21189944-21189963 None:intergenic 35.0%
TATACCATCTAGCAAAGAAC+AGG + Chr5:21189937-21189956 MsG0580025606.01.T01:three_prime_UTR 35.0%
TCAAATGGGTGGTTACATTA+AGG + Chr5:21187134-21187153 MsG0580025606.01.T01:intron 35.0%
TGAAACGGGGGTTATATTTA+GGG + Chr5:21187099-21187118 MsG0580025606.01.T01:intron 35.0%
TGATTTACCTGCATTTGATC+CGG - Chr5:21188972-21188991 None:intergenic 35.0%
TGCTAAGGCTAACAATGTTT+GGG + Chr5:21186662-21186681 MsG0580025606.01.T01:intron 35.0%
TGTTGAAGTTATTGAAGAGG+AGG - Chr5:21189898-21189917 None:intergenic 35.0%
TTGAAACGGGGGTTATATTT+AGG + Chr5:21187098-21187117 MsG0580025606.01.T01:intron 35.0%
! AACCTTCTGGAGAAATTGAA+AGG - Chr5:21186077-21186096 None:intergenic 35.0%
! ACCTTCTGGAGAAATTGAAA+GGG - Chr5:21186076-21186095 None:intergenic 35.0%
! ATAATTTTCTAGGCTGCAAC+GGG + Chr5:21189134-21189153 MsG0580025606.01.T01:intron 35.0%
! CATCTAGTAATTTGAAACGG+GGG + Chr5:21187087-21187106 MsG0580025606.01.T01:intron 35.0%
! GACCTAACCAAAACATTTTG+AGG + Chr5:21186470-21186489 MsG0580025606.01.T01:intron 35.0%
! GATAATTTTCTAGGCTGCAA+CGG + Chr5:21189133-21189152 MsG0580025606.01.T01:intron 35.0%
! GCATCTAGTAATTTGAAACG+GGG + Chr5:21187086-21187105 MsG0580025606.01.T01:intron 35.0%
! GCTGTATTGACATAATCCAT+AGG - Chr5:21189559-21189578 None:intergenic 35.0%
! TGGCAAATTTTACAGCCATA+TGG - Chr5:21188848-21188867 None:intergenic 35.0%
!! AGTGATGGAAGTATCACATA+TGG + Chr5:21188642-21188661 MsG0580025606.01.T01:CDS 35.0%
AAACCTTACCCTGGAACTAA+TGG - Chr5:21187323-21187342 None:intergenic 40.0%
AACCTTACCCTGGAACTAAT+GGG - Chr5:21187322-21187341 None:intergenic 40.0%
AAGAGGTAAAGTGAACCTTC+TGG - Chr5:21186090-21186109 None:intergenic 40.0%
AATTGTTGGTGTAGTGACTG+AGG + Chr5:21188476-21188495 MsG0580025606.01.T01:CDS 40.0%
ACTGCATGCATGACAAACAA+TGG + Chr5:21187436-21187455 MsG0580025606.01.T01:intron 40.0%
AGAAAAATGGTAGCTGGTAG+TGG + Chr5:21189454-21189473 MsG0580025606.01.T01:CDS 40.0%
AGGGCTATAAACAGTGATTC+CGG - Chr5:21188760-21188779 None:intergenic 40.0%
CAAGACTGTCATCACAATCT+TGG - Chr5:21188578-21188597 None:intergenic 40.0%
CATTGATACCATGATGAGTG+GGG + Chr5:21189812-21189831 MsG0580025606.01.T01:three_prime_UTR 40.0%
CCATTGATACCATGATGAGT+GGG + Chr5:21189811-21189830 MsG0580025606.01.T01:three_prime_UTR 40.0%
CGGTATCTGGTCACTAATTT+GGG + Chr5:21189033-21189052 MsG0580025606.01.T01:intron 40.0%
CTGCTAAGGCTAACAATGTT+TGG + Chr5:21186661-21186680 MsG0580025606.01.T01:intron 40.0%
GGTATCTGGTCACTAATTTG+GGG + Chr5:21189034-21189053 MsG0580025606.01.T01:intron 40.0%
TAGACATGAACGTTCGTTAG+TGG - Chr5:21189074-21189093 None:intergenic 40.0%
TATTATGGACTCAACAAGCC+TGG + Chr5:21188786-21188805 MsG0580025606.01.T01:CDS 40.0%
TCCATTGATACCATGATGAG+TGG + Chr5:21189810-21189829 MsG0580025606.01.T01:three_prime_UTR 40.0%
TCGGTATCTGGTCACTAATT+TGG + Chr5:21189032-21189051 MsG0580025606.01.T01:intron 40.0%
TGAATACGAGCATCCAAAGA+AGG + Chr5:21186010-21186029 MsG0580025606.01.T01:CDS 40.0%
TTCTTTGGATGCTCGTATTC+AGG - Chr5:21186011-21186030 None:intergenic 40.0%
TTTGTAATCCCCACTCATCA+TGG - Chr5:21189823-21189842 None:intergenic 40.0%
! AACATCGATTGGTCGAAGTT+GGG - Chr5:21186737-21186756 None:intergenic 40.0%
! CCTTCTGGAGAAATTGAAAG+GGG - Chr5:21186075-21186094 None:intergenic 40.0%
! CTGTTGTATTGGTGTTTGCA+TGG - Chr5:21186244-21186263 None:intergenic 40.0%
! GTGGTAAGGCATTAGGTATA+CGG - Chr5:21188710-21188729 None:intergenic 40.0%
! TAATTTTCTAGGCTGCAACG+GGG + Chr5:21189135-21189154 MsG0580025606.01.T01:intron 40.0%
!! CATTCAAAGTGTTGTACTGC+GGG + Chr5:21187243-21187262 MsG0580025606.01.T01:CDS 40.0%
!! GATGGAAGTATCACATATGG+AGG + Chr5:21188645-21188664 MsG0580025606.01.T01:CDS 40.0%
!! GCATTCAAAGTGTTGTACTG+CGG + Chr5:21187242-21187261 MsG0580025606.01.T01:CDS 40.0%
ACTATCCAGCCAACATCGAT+TGG - Chr5:21186748-21186767 None:intergenic 45.0%
AGCAAAGGGGGGTTACATTA+AGG - Chr5:21186898-21186917 None:intergenic 45.0%
ATCCAAAGAAGGCCTTTGGT+TGG + Chr5:21186021-21186040 MsG0580025606.01.T01:CDS 45.0%
ATGATTATAAGGGCGACCCA+AGG - Chr5:21186853-21186872 None:intergenic 45.0%
CAACTTCGACCAATCGATGT+TGG + Chr5:21186736-21186755 MsG0580025606.01.T01:intron 45.0%
CCCACTCATCATGGTATCAA+TGG - Chr5:21189814-21189833 None:intergenic 45.0%
CCCCTTTCAATTTCTCCAGA+AGG + Chr5:21186072-21186091 MsG0580025606.01.T01:CDS 45.0%
GCAAAGGGGGGTTACATTAA+GGG - Chr5:21186897-21186916 None:intergenic 45.0%
GTAACTCAAGAGGCTTCTCT+GGG - Chr5:21189259-21189278 None:intergenic 45.0%
GTAGGGAGAAAAATGGTAGC+TGG + Chr5:21189448-21189467 MsG0580025606.01.T01:intron 45.0%
TAACTCAAGAGGCTTCTCTG+GGG - Chr5:21189258-21189277 None:intergenic 45.0%
TACCCATTAGTTCCAGGGTA+AGG + Chr5:21187317-21187336 MsG0580025606.01.T01:intron 45.0%
TCCAAAGAAGGCCTTTGGTT+GGG + Chr5:21186022-21186041 MsG0580025606.01.T01:CDS 45.0%
TGGGTGGTTACATTAAGGGA+CGG + Chr5:21187139-21187158 MsG0580025606.01.T01:intron 45.0%
TGGTTACATTAAGGGACGGA+GGG + Chr5:21187143-21187162 MsG0580025606.01.T01:intron 45.0%
! AACAAGCCTGGTCTTCATGT+GGG + Chr5:21188798-21188817 MsG0580025606.01.T01:CDS 45.0%
! CAACATCGATTGGTCGAAGT+TGG - Chr5:21186738-21186757 None:intergenic 45.0%
! GCATCAAGTGGTAAGGCATT+AGG - Chr5:21188717-21188736 None:intergenic 45.0%
! TCGTTAGTGGACAGTGGAAT+TGG - Chr5:21189061-21189080 None:intergenic 45.0%
! TTACCCTGGAACTAATGGGT+AGG - Chr5:21187318-21187337 None:intergenic 45.0%
!! AATGGTAGCTGGTAGTGGAA+TGG + Chr5:21189459-21189478 MsG0580025606.01.T01:CDS 45.0%
!! AGTTGATGACAAAGTGGGTG+TGG + Chr5:21188524-21188543 MsG0580025606.01.T01:CDS 45.0%
!! ATGGTAGCTGGTAGTGGAAT+GGG + Chr5:21189460-21189479 MsG0580025606.01.T01:CDS 45.0%
!! GTTGATGACAAAGTGGGTGT+GGG + Chr5:21188525-21188544 MsG0580025606.01.T01:CDS 45.0%
!! TAATAATTAAAATATGTTAT+AGG + Chr5:21188327-21188346 MsG0580025606.01.T01:intron 5.0%
!!! AAAAATTGATAATTTTTTTT+TGG + Chr5:21188189-21188208 MsG0580025606.01.T01:intron 5.0%
!!! TATTAAATTTACTTTTTATA+GGG + Chr5:21187199-21187218 MsG0580025606.01.T01:intron 5.0%
AAACAGTGATTCCGGCGCAA+AGG - Chr5:21188752-21188771 None:intergenic 50.0%
AAAGGGGAGAGAACACCAGA+AGG - Chr5:21186059-21186078 None:intergenic 50.0%
AGCAACGGCATCAAGTGGTA+AGG - Chr5:21188724-21188743 None:intergenic 50.0%
AGGGGGGTTACATTAAGGGA+CGG - Chr5:21186893-21186912 None:intergenic 50.0%
ATCTCTAGCTGCCCAACCAA+AGG - Chr5:21186036-21186055 None:intergenic 50.0%
CCACCTACCCATTAGTTCCA+GGG + Chr5:21187312-21187331 MsG0580025606.01.T01:CDS 50.0%
CCTGCATTTGATCCGGATCA+CGG - Chr5:21188965-21188984 None:intergenic 50.0%
GAGCATCCAAAGAAGGCCTT+TGG + Chr5:21186017-21186036 MsG0580025606.01.T01:CDS 50.0%
GGGTTACATTAAGGGACGGA+GGG - Chr5:21186889-21186908 None:intergenic 50.0%
GGTAACTCAAGAGGCTTCTC+TGG - Chr5:21189260-21189279 None:intergenic 50.0%
GTGGTTACATTAAGGGACGG+AGG + Chr5:21187142-21187161 MsG0580025606.01.T01:intron 50.0%
GTTGGTGTAGTGACTGAGGT+GGG + Chr5:21188480-21188499 MsG0580025606.01.T01:CDS 50.0%
TAGTGGAATGGGAGGGATGA+AGG + Chr5:21189471-21189490 MsG0580025606.01.T01:CDS 50.0%
TCCACCTACCCATTAGTTCC+AGG + Chr5:21187311-21187330 MsG0580025606.01.T01:CDS 50.0%
TGTTGGTGTAGTGACTGAGG+TGG + Chr5:21188479-21188498 MsG0580025606.01.T01:CDS 50.0%
TTCGACCAATCGATGTTGGC+TGG + Chr5:21186740-21186759 MsG0580025606.01.T01:intron 50.0%
! CAACAAGCCTGGTCTTCATG+TGG + Chr5:21188797-21188816 MsG0580025606.01.T01:CDS 50.0%
! CGATTGGTCGAAGTTGGGTT+TGG - Chr5:21186732-21186751 None:intergenic 50.0%
! GAACGTTCGTTAGTGGACAG+TGG - Chr5:21189067-21189086 None:intergenic 50.0%
!! TAGCTGGTAGTGGAATGGGA+GGG + Chr5:21189464-21189483 MsG0580025606.01.T01:CDS 50.0%
ACCAGCGTGGCCTTTACTAG+TGG + Chr5:21189277-21189296 MsG0580025606.01.T01:CDS 55.0%
AGAGGAGCAACGGCATCAAG+TGG - Chr5:21188729-21188748 None:intergenic 55.0%
AGCCTCTTGAGTTACCAGCG+TGG + Chr5:21189264-21189283 MsG0580025606.01.T01:CDS 55.0%
ATCCGTTCTTGGCCATGTGG+AGG - Chr5:21187283-21187302 None:intergenic 55.0%
CACATGGCCAAGAACGGATG+GGG + Chr5:21187284-21187303 MsG0580025606.01.T01:CDS 55.0%
CCACATGGCCAAGAACGGAT+GGG + Chr5:21187283-21187302 MsG0580025606.01.T01:CDS 55.0%
CCAGCGTGGCCTTTACTAGT+GGG + Chr5:21189278-21189297 MsG0580025606.01.T01:CDS 55.0%
CCGTGATCCGGATCAAATGC+AGG + Chr5:21188962-21188981 MsG0580025606.01.T01:CDS 55.0%
GACCTCCACATGGCCAAGAA+CGG + Chr5:21187278-21187297 MsG0580025606.01.T01:CDS 55.0%
GCCCAACCAAAGGCCTTCTT+TGG - Chr5:21186026-21186045 None:intergenic 55.0%
GGGGTTACATTAAGGGACGG+AGG - Chr5:21186890-21186909 None:intergenic 55.0%
GTACTGCGGGATATGCCACA+CGG + Chr5:21187256-21187275 MsG0580025606.01.T01:CDS 55.0%
GTGGGTGTGGGATGCTTAGT+TGG + Chr5:21188537-21188556 MsG0580025606.01.T01:CDS 55.0%
TCCACATGGCCAAGAACGGA+TGG + Chr5:21187282-21187301 MsG0580025606.01.T01:CDS 55.0%
TGGGCAGCTAGAGATCCTTC+TGG + Chr5:21186041-21186060 MsG0580025606.01.T01:CDS 55.0%
! CCCTGGAACTAATGGGTAGG+TGG - Chr5:21187315-21187334 None:intergenic 55.0%
! TGGAGGCTACTCTGACTCGA+TGG + Chr5:21188662-21188681 MsG0580025606.01.T01:CDS 55.0%
!! GTAGCTGGTAGTGGAATGGG+AGG + Chr5:21189463-21189482 MsG0580025606.01.T01:CDS 55.0%
ACCACGCCCACATGAAGACC+AGG - Chr5:21188807-21188826 None:intergenic 60.0%
ATGCCACACGGACCTCCACA+TGG + Chr5:21187268-21187287 MsG0580025606.01.T01:CDS 60.0%
CCCACTAGTAAAGGCCACGC+TGG - Chr5:21189281-21189300 None:intergenic 60.0%
CCCATCCGTTCTTGGCCATG+TGG - Chr5:21187286-21187305 None:intergenic 60.0%
CTAGGCTGCAACGGGGACTT+TGG + Chr5:21189142-21189161 MsG0580025606.01.T01:intron 60.0%
GCTGCAACGGGGACTTTGGA+TGG + Chr5:21189146-21189165 MsG0580025606.01.T01:CDS 60.0%
GGATGTGCCCCATCCGTTCT+TGG - Chr5:21187294-21187313 None:intergenic 60.0%
GGCCACGCTGGTAACTCAAG+AGG - Chr5:21189269-21189288 None:intergenic 60.0%
GGCGCAAAGGAGAGGAGCAA+CGG - Chr5:21188739-21188758 None:intergenic 60.0%
GGTCTTCATGTGGGCGTGGT+TGG + Chr5:21188807-21188826 MsG0580025606.01.T01:CDS 60.0%
GTGATTCCGGCGCAAAGGAG+AGG - Chr5:21188747-21188766 None:intergenic 60.0%
GTTGCTCCTCTCCTTTGCGC+CGG + Chr5:21188738-21188757 MsG0580025606.01.T01:CDS 60.0%
CCATATGGCCCAACCCACCC+AGG - Chr5:21188833-21188852 None:intergenic 65.0%
TGGCCATGTGGAGGTCCGTG+TGG - Chr5:21187274-21187293 None:intergenic 65.0%
! GCCTGGTCTTCATGTGGGCG+TGG + Chr5:21188803-21188822 MsG0580025606.01.T01:CDS 65.0%
! TCATGTGGGCGTGGTTGGCC+TGG + Chr5:21188812-21188831 MsG0580025606.01.T01:CDS 65.0%
!! CATGTGGGCGTGGTTGGCCT+GGG + Chr5:21188813-21188832 MsG0580025606.01.T01:CDS 65.0%
!! CCTGGGTGGGTTGGGCCATA+TGG + Chr5:21188830-21188849 MsG0580025606.01.T01:CDS 65.0%
!! GTGGTTGGCCTGGGTGGGTT+GGG + Chr5:21188822-21188841 MsG0580025606.01.T01:CDS 65.0%
!! CGTGGTTGGCCTGGGTGGGT+TGG + Chr5:21188821-21188840 MsG0580025606.01.T01:CDS 70.0%
!! TGGGCGTGGTTGGCCTGGGT+GGG + Chr5:21188817-21188836 MsG0580025606.01.T01:CDS 70.0%
!! GTGGGCGTGGTTGGCCTGGG+TGG + Chr5:21188816-21188835 MsG0580025606.01.T01:CDS 75.0%
Chromosome Type Strat End Strand Name
Chr5 gene 21185996 21189982 21185996 ID=MsG0580025606.01;Name=MsG0580025606.01
Chr5 mRNA 21185996 21189982 21185996 ID=MsG0580025606.01.T01;Parent=MsG0580025606.01;Name=MsG0580025606.01.T01;_AED=0.40;_eAED=0.40;_QI=0|0.5|0.4|1|1|1|5|325|361
Chr5 exon 21185996 21186093 21185996 ID=MsG0580025606.01.T01:exon:9056;Parent=MsG0580025606.01.T01
Chr5 exon 21187220 21187333 21187220 ID=MsG0580025606.01.T01:exon:9057;Parent=MsG0580025606.01.T01
Chr5 exon 21188470 21188983 21188470 ID=MsG0580025606.01.T01:exon:9058;Parent=MsG0580025606.01.T01
Chr5 exon 21189146 21189299 21189146 ID=MsG0580025606.01.T01:exon:9059;Parent=MsG0580025606.01.T01
Chr5 exon 21189452 21189982 21189452 ID=MsG0580025606.01.T01:exon:9060;Parent=MsG0580025606.01.T01
Chr5 CDS 21185996 21186093 21185996 ID=MsG0580025606.01.T01:cds;Parent=MsG0580025606.01.T01
Chr5 CDS 21187220 21187333 21187220 ID=MsG0580025606.01.T01:cds;Parent=MsG0580025606.01.T01
Chr5 CDS 21188470 21188983 21188470 ID=MsG0580025606.01.T01:cds;Parent=MsG0580025606.01.T01
Chr5 CDS 21189146 21189299 21189146 ID=MsG0580025606.01.T01:cds;Parent=MsG0580025606.01.T01
Chr5 CDS 21189452 21189657 21189452 ID=MsG0580025606.01.T01:cds;Parent=MsG0580025606.01.T01
Chr5 three_prime_UTR 21189658 21189982 21189658 ID=MsG0580025606.01.T01:three_prime_utr;Parent=MsG0580025606.01.T01
Gene Sequence

>MsG0580025606.01.T01

ATGGCAACACAGCCTGAATACGAGCATCCAAAGAAGGCCTTTGGTTGGGCAGCTAGAGATCCTTCTGGTGTTCTCTCCCCTTTCAATTTCTCCAGAAGGGAGACAGGTGAGAAAGATGTTGCATTCAAAGTGTTGTACTGCGGGATATGCCACACGGACCTCCACATGGCCAAGAACGGATGGGGCACATCCACCTACCCATTAGTTCCAGGGCACGAAATTGTTGGTGTAGTGACTGAGGTGGGAAGCAAAGTAGAAAATTTCAAAGTTGATGACAAAGTGGGTGTGGGATGCTTAGTTGGTTCTTGCAGATCGTGCCAAGATTGTGATGACAGTCTTGAAAATTACTGCACAAAATTTATACTGACATATGGTGCTAAATATAGTGATGGAAGTATCACATATGGAGGCTACTCTGACTCGATGGTTGTAGACGAGCGCTTTGTGATCCGTATACCTAATGCCTTACCACTTGATGCCGTTGCTCCTCTCCTTTGCGCCGGAATCACTGTTTATAGCCCTCTTATATATTATGGACTCAACAAGCCTGGTCTTCATGTGGGCGTGGTTGGCCTGGGTGGGTTGGGCCATATGGCTGTAAAATTTGCCAAAGCTTTTGGAGTTAATGTGACTGTAATTAGTACATCACCAAACAAAAAGAAGGAAGCAATAGAACACCTCAAAGCTGATTCATTTCTAATTAGCCGTGATCCGGATCAAATGCAGGCTGCAACGGGGACTTTGGATGGCATTATTGACACAATTTCTGCTGATCATTCCCTCTTACCCTTAATTGATTTACTAAAATCTCATGGAAAGCTTATATTGGTTGGTGCCCCAGAGAAGCCTCTTGAGTTACCAGCGTGGCCTTTACTAGTGGGGAGAAAAATGGTAGCTGGTAGTGGAATGGGAGGGATGAAGGAAACTCAAGAGATGATTGATTTTGCTGCTAAACACAATGTACAACCTGATATTGAAGTTATACCTATGGATTATGTCAATACAGCAATGGAGCGTGTTCTCAAATCAGATGTTAAATATCGATTTGTGATTGACATTGGAAACACTCTTGAAACAAGCCCTTAA
Protein sequence

>MsG0580025606.01.T01

MATQPEYEHPKKAFGWAARDPSGVLSPFNFSRRETGEKDVAFKVLYCGICHTDLHMAKNGWGTSTYPLVPGHEIVGVVTEVGSKVENFKVDDKVGVGCLVGSCRSCQDCDDSLENYCTKFILTYGAKYSDGSITYGGYSDSMVVDERFVIRIPNALPLDAVAPLLCAGITVYSPLIYYGLNKPGLHVGVVGLGGLGHMAVKFAKAFGVNVTVISTSPNKKKEAIEHLKADSFLISRDPDQMQAATGTLDGIIDTISADHSLLPLIDLLKSHGKLILVGAPEKPLELPAWPLLVGRKMVAGSGMGGMKETQEMIDFAAKHNVQPDIEVIPMDYVNTAMERVLKSDVKYRFVIDIGNTLETSP*