Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880042958.01.T02 | RHN39669.1 | 97.753 | 89 | 2 | 0 | 2 | 90 | 164 | 252 | 1.07E-52 | 175 |
| MsG0880042958.01.T01 | RHN39669.1 | 97.753 | 89 | 2 | 0 | 2 | 90 | 164 | 252 | 1.07E-52 | 175 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880042958.01.T01 | U3MMQ4 | 46.479 | 71 | 35 | 2 | 1 | 70 | 200 | 268 | 2.85E-12 | 63.5 |
| MsG0880042958.01.T02 | U3MMQ4 | 46.479 | 71 | 35 | 2 | 1 | 70 | 200 | 268 | 2.85E-12 | 63.5 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880042958.01.T01 | A0A396GE58 | 97.753 | 89 | 2 | 0 | 2 | 90 | 164 | 252 | 5.10e-53 | 175 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080047899.01 | MsG0880042958.01 | 0.842139 | 3.104100e-58 | 4.662306e-55 |
| MsG0080048357.01 | MsG0880042958.01 | 0.842988 | 1.847452e-58 | 2.849338e-55 |
| MsG0180000038.01 | MsG0880042958.01 | 0.819771 | 9.750235e-53 | 7.573667e-50 |
| MsG0180000404.01 | MsG0880042958.01 | 0.844744 | 6.255177e-59 | 1.019660e-55 |
| MsG0180001771.01 | MsG0880042958.01 | 0.842184 | 3.019311e-58 | 4.541245e-55 |
| MsG0180003741.01 | MsG0880042958.01 | 0.891017 | 5.828794e-74 | 5.022911e-70 |
| MsG0180004541.01 | MsG0880042958.01 | 0.811798 | 5.847216e-51 | 3.653945e-48 |
| MsG0180005113.01 | MsG0880042958.01 | 0.818717 | 1.694265e-52 | 1.278006e-49 |
| MsG0780040846.01 | MsG0880042958.01 | 0.867137 | 1.707410e-65 | 5.896924e-62 |
| MsG0780040855.01 | MsG0880042958.01 | 0.831498 | 1.613724e-55 | 1.754302e-52 |
| MsG0780040966.01 | MsG0880042958.01 | 0.813039 | 3.131694e-51 | 2.023055e-48 |
| MsG0780041259.01 | MsG0880042958.01 | 0.893446 | 6.237089e-75 | 5.942989e-71 |
| MsG0780041448.01 | MsG0880042958.01 | 0.810333 | 1.214286e-50 | 7.299068e-48 |
| MsG0780041676.01 | MsG0880042958.01 | 0.808866 | 2.509370e-50 | 1.450950e-47 |
| MsG0780041698.01 | MsG0880042958.01 | 0.854398 | 1.264038e-61 | 2.819104e-58 |
| MsG0780041699.01 | MsG0880042958.01 | 0.805830 | 1.104297e-49 | 5.901617e-47 |
| MsG0880041834.01 | MsG0880042958.01 | 0.836590 | 8.561584e-57 | 1.083807e-53 |
| MsG0880041858.01 | MsG0880042958.01 | 0.841730 | 3.978811e-58 | 5.899350e-55 |
| MsG0880042958.01 | MsG0880042959.01 | 0.897005 | 2.136809e-76 | 2.368212e-72 |
| MsG0880042958.01 | MsG0880043174.01 | 0.802307 | 5.970500e-49 | 2.915063e-46 |
| MsG0880042958.01 | MsG0880044704.01 | 0.834673 | 2.615717e-56 | 3.125855e-53 |
| MsG0880042958.01 | MsG0880045585.01 | 0.808650 | 2.790443e-50 | 1.604293e-47 |
| MsG0880042958.01 | MsG0880045586.01 | 0.800682 | 1.284963e-48 | 6.020280e-46 |
| MsG0880042958.01 | MsG0880045953.01 | 0.843625 | 1.248950e-58 | 1.965824e-55 |
| MsG0880042958.01 | MsG0880045969.01 | 0.823418 | 1.399941e-53 | 1.204629e-50 |
| MsG0880042958.01 | MsG0880046457.01 | 0.805588 | 1.241862e-49 | 6.595403e-47 |
| MsG0280011454.01 | MsG0880042958.01 | 0.800494 | 1.404036e-48 | 6.546816e-46 |
| MsG0380011496.01 | MsG0880042958.01 | 0.809603 | 1.744353e-50 | 1.028703e-47 |
| MsG0680030784.01 | MsG0880042958.01 | 0.822042 | 2.926593e-53 | 2.421893e-50 |
| MsG0680031621.01 | MsG0880042958.01 | 0.803638 | 3.168664e-49 | 1.600532e-46 |
| MsG0680031707.01 | MsG0880042958.01 | 0.830614 | 2.659429e-55 | 2.816438e-52 |
| MsG0680031959.01 | MsG0880042958.01 | 0.830938 | 2.215592e-55 | 2.368960e-52 |
| MsG0680034750.01 | MsG0880042958.01 | 0.816941 | 4.264535e-52 | 3.063969e-49 |
| MsG0480019279.01 | MsG0880042958.01 | 0.819776 | 9.725036e-53 | 7.554996e-50 |
| MsG0480020315.01 | MsG0880042958.01 | 0.805011 | 1.640253e-49 | 8.582947e-47 |
| MsG0480020517.01 | MsG0880042958.01 | 0.822654 | 2.109999e-53 | 1.777064e-50 |
| MsG0480024022.01 | MsG0880042958.01 | 0.838297 | 3.126892e-57 | 4.169676e-54 |
| MsG0580024443.01 | MsG0880042958.01 | 0.850661 | 1.469850e-60 | 2.900193e-57 |
| MsG0580024966.01 | MsG0880042958.01 | 0.800054 | 1.725116e-48 | 7.954746e-46 |
| MsG0580025449.01 | MsG0880042958.01 | 0.803455 | 3.458616e-49 | 1.738758e-46 |
| MsG0580025466.01 | MsG0880042958.01 | 0.814787 | 1.289772e-51 | 8.735820e-49 |
| MsG0580025607.01 | MsG0880042958.01 | 0.827825 | 1.263122e-54 | 1.233190e-51 |
| MsG0580025668.01 | MsG0880042958.01 | 0.807713 | 4.419431e-50 | 2.479226e-47 |
| MsG0380016465.01 | MsG0880042958.01 | 0.820312 | 7.329900e-53 | 5.779514e-50 |
| MsG0380017823.01 | MsG0880042958.01 | 0.800034 | 1.741851e-48 | 8.027659e-46 |
| MsG0480018200.01 | MsG0880042958.01 | 0.826996 | 1.995817e-54 | 1.902060e-51 |
| MsG0580026179.01 | MsG0880042958.01 | 0.808271 | 3.361018e-50 | 1.913466e-47 |
| MsG0580027726.01 | MsG0880042958.01 | 0.801297 | 9.624672e-49 | 4.580116e-46 |
| MsG0580027763.01 | MsG0880042958.01 | 0.810691 | 1.016125e-50 | 6.166752e-48 |
| MsG0580027925.01 | MsG0880042958.01 | 0.847060 | 1.468067e-59 | 2.577996e-56 |
| MsG0580028960.01 | MsG0880042958.01 | 0.858456 | 8.136792e-63 | 2.077930e-59 |
| MsG0580028987.01 | MsG0880042958.01 | 0.831288 | 1.817119e-55 | 1.963015e-52 |
| MsG0580029310.01 | MsG0880042958.01 | 0.879987 | 7.953439e-70 | 4.405543e-66 |
| MsG0580029417.01 | MsG0880042958.01 | 0.824662 | 7.149591e-54 | 6.374671e-51 |
| MsG0580029418.01 | MsG0880042958.01 | 0.840895 | 6.601741e-58 | 9.538215e-55 |
| MsG0680030328.01 | MsG0880042958.01 | 0.824240 | 8.983660e-54 | 7.912188e-51 |
| MsG0680030329.01 | MsG0880042958.01 | 0.822331 | 2.508497e-53 | 2.093260e-50 |
| MsG0280007252.01 | MsG0880042958.01 | 0.802919 | 4.464173e-49 | 2.213750e-46 |
| MsG0280007305.01 | MsG0880042958.01 | 0.834196 | 3.447470e-56 | 4.061142e-53 |
| MsG0280007432.01 | MsG0880042958.01 | 0.806113 | 9.632506e-50 | 5.185058e-47 |
| MsG0280007750.01 | MsG0880042958.01 | 0.808221 | 3.444947e-50 | 1.958585e-47 |
| MsG0280008390.01 | MsG0880042958.01 | 0.851238 | 1.010893e-60 | 2.032890e-57 |
| MsG0280008391.01 | MsG0880042958.01 | 0.826595 | 2.488388e-54 | 2.343984e-51 |
| MsG0280008392.01 | MsG0880042958.01 | 0.829267 | 5.665033e-55 | 5.769707e-52 |
| MsG0280008395.01 | MsG0880042958.01 | 0.825250 | 5.193670e-54 | 4.708750e-51 |
| MsG0280008397.01 | MsG0880042958.01 | 0.804307 | 2.300522e-49 | 1.182156e-46 |
| MsG0280010489.01 | MsG0880042958.01 | 0.804601 | 1.997492e-49 | 1.034238e-46 |
| MsG0780037341.01 | MsG0880042958.01 | 0.821906 | 3.147722e-53 | 2.594983e-50 |
| MsG0780037372.01 | MsG0880042958.01 | 0.818518 | 1.880210e-52 | 1.410546e-49 |
| MsG0780037395.01 | MsG0880042958.01 | 0.825808 | 3.831139e-54 | 3.529184e-51 |
| MsG0780038048.01 | MsG0880042958.01 | 0.821525 | 3.855822e-53 | 3.144365e-50 |
| MsG0780038847.01 | MsG0880042958.01 | 0.808032 | 3.780250e-50 | 2.138430e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880042958.01.T02 | MTR_8g027100 | 97.753 | 89 | 2 | 0 | 2 | 90 | 188 | 276 | 4.14e-56 | 174 |
| MsG0880042958.01.T01 | MTR_8g027100 | 97.753 | 89 | 2 | 0 | 2 | 90 | 188 | 276 | 4.14e-56 | 174 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 0 sgRNAs with CRISPR-Local
Find 96 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATGAATTGAAAAAATTAATT+TGG | + | Chr8:16689644-16689663 | None:intergenic | 10.0% |
| !!! | AAATTAATTTTTTCAATTCA+TGG | - | Chr8:16689643-16689662 | MsG0880042958.01.T02:CDS | 10.0% |
| !!! | ATCATATATTATGAAATTTT+TGG | - | Chr8:16689850-16689869 | MsG0880042958.01.T02:intron | 10.0% |
| !!! | TATAAATTTTGTCAAAAAAA+TGG | + | Chr8:16689776-16689795 | None:intergenic | 10.0% |
| !!! | TCATATATTATGAAATTTTT+GGG | - | Chr8:16689851-16689870 | MsG0880042958.01.T02:intron | 10.0% |
| !! | ATTATTTGCTTGAAATTAAT+TGG | - | Chr8:16688438-16688457 | MsG0880042958.01.T02:intron | 15.0% |
| !! | TTCAAGCAAATAATAATTAT+TGG | + | Chr8:16688432-16688451 | None:intergenic | 15.0% |
| !!! | AAAAAATTAATTTGGTAAAC+AGG | + | Chr8:16689636-16689655 | None:intergenic | 15.0% |
| !!! | CTAAATAATCATTTGATTTT+AGG | - | Chr8:16688851-16688870 | MsG0880042958.01.T02:intron | 15.0% |
| !!! | GCAAATAAATTTATTTTGTT+TGG | + | Chr8:16689488-16689507 | None:intergenic | 15.0% |
| !!! | TGTTTTTAAGATAAATAGAT+AGG | - | Chr8:16689121-16689140 | MsG0880042958.01.T02:intron | 15.0% |
| !! | AAACTCTATAAAATCATGTT+TGG | - | Chr8:16689371-16689390 | MsG0880042958.01.T02:intron | 20.0% |
| !! | AAGATAAATAGATAGGTATA+TGG | - | Chr8:16689128-16689147 | MsG0880042958.01.T02:intron | 20.0% |
| !! | AATAATACTAAGTGAATGTT+TGG | + | Chr8:16689565-16689584 | None:intergenic | 20.0% |
| !! | ATATTATCATTTACTTGTGA+TGG | - | Chr8:16688665-16688684 | MsG0880042958.01.T02:intron | 20.0% |
| !! | CTATTTATCTTAAAAACAGA+AGG | + | Chr8:16689119-16689138 | None:intergenic | 20.0% |
| !! | TAATTACATATATAGCCTTT+AGG | + | Chr8:16688212-16688231 | None:intergenic | 20.0% |
| !! | TTAAACATCAACCATATATA+TGG | + | Chr8:16690113-16690132 | None:intergenic | 20.0% |
| !!! | ATGAAATTTTTGGGTTTATT+TGG | - | Chr8:16689860-16689879 | MsG0880042958.01.T02:intron | 20.0% |
| !!! | ATTTATTTCCATTTTCACAA+TGG | - | Chr8:16688316-16688335 | MsG0880042958.01.T02:intron | 20.0% |
| !!! | CTGTATTATTCCAATTTTAT+CGG | - | Chr8:16688974-16688993 | MsG0880042958.01.T02:intron | 20.0% |
| !!! | TATATGGTTGATGTTTAATT+TGG | - | Chr8:16690115-16690134 | MsG0880042958.01.T02:CDS | 20.0% |
| ! | AAAAAAGACAGTTCATGAAA+AGG | + | Chr8:16688645-16688664 | None:intergenic | 25.0% |
| ! | AAAAAGACAGTTCATGAAAA+GGG | + | Chr8:16688644-16688663 | None:intergenic | 25.0% |
| ! | ACACAAATTACAAAATCACA+TGG | + | Chr8:16690030-16690049 | None:intergenic | 25.0% |
| ! | ACGTATGAGATTAAATACTT+AGG | - | Chr8:16689970-16689989 | MsG0880042958.01.T02:intron | 25.0% |
| ! | ATCTATTCAAGTGATATTGA+TGG | - | Chr8:16689711-16689730 | MsG0880042958.01.T02:intron | 25.0% |
| ! | ATGCATGTCTCAAATTAATT+TGG | - | Chr8:16688724-16688743 | MsG0880042958.01.T02:intron | 25.0% |
| ! | ATTAATAACCACATGAATGA+AGG | - | Chr8:16688565-16688584 | MsG0880042958.01.T02:intron | 25.0% |
| ! | ATTAATTTATAGTCCTTTCG+AGG | + | Chr8:16689004-16689023 | None:intergenic | 25.0% |
| ! | CAAGAAAAAAAGAGTTTAAG+AGG | + | Chr8:16689246-16689265 | None:intergenic | 25.0% |
| ! | CCAAAACTTAAAGCAAAAAA+TGG | - | Chr8:16688088-16688107 | MsG0880042958.01.T02:three_prime_UTR | 25.0% |
| ! | CGATAAAATTGGAATAATAC+AGG | + | Chr8:16688976-16688995 | None:intergenic | 25.0% |
| ! | GTAAACTCTTAGATACTTTA+GGG | - | Chr8:16688873-16688892 | MsG0880042958.01.T02:intron | 25.0% |
| ! | TCAATATCACTTGAATAGAT+TGG | + | Chr8:16689711-16689730 | None:intergenic | 25.0% |
| ! | TCTAAAAAAACACTCAAACT+GGG | - | Chr8:16689219-16689238 | MsG0880042958.01.T02:intron | 25.0% |
| ! | TTGCTTGAAATTAATTGGTT+AGG | - | Chr8:16688443-16688462 | MsG0880042958.01.T02:intron | 25.0% |
| ! | TTTATCTTAAAAACAGAAGG+AGG | + | Chr8:16689116-16689135 | None:intergenic | 25.0% |
| ! | TTTATTTGGATTAACCTTTC+TGG | - | Chr8:16689874-16689893 | MsG0880042958.01.T02:intron | 25.0% |
| !! | TTATAGAGTTTGAATGCTTT+TGG | + | Chr8:16689362-16689381 | None:intergenic | 25.0% |
| !!! | CCATTTTTTGCTTTAAGTTT+TGG | + | Chr8:16688091-16688110 | None:intergenic | 25.0% |
| !!! | CTCTTAAACTCTTTTTTTCT+TGG | - | Chr8:16689244-16689263 | MsG0880042958.01.T02:intron | 25.0% |
| !!! | GAGTGTTGATTTTTTTACAA+AGG | + | Chr8:16689188-16689207 | None:intergenic | 25.0% |
| AATCACATGGTTCAATTCTT+TGG | + | Chr8:16690017-16690036 | None:intergenic | 30.0% | |
| ACAGAAGGAGGATAAAATTA+AGG | + | Chr8:16689104-16689123 | None:intergenic | 30.0% | |
| ACTTTCTTGATGTCTTTCAT+TGG | + | Chr8:16688163-16688182 | None:intergenic | 30.0% | |
| ATAGATAGGTATATGGATGA+TGG | - | Chr8:16689135-16689154 | MsG0880042958.01.T02:intron | 30.0% | |
| ATGTATCCTGCTTAATTGAT+AGG | + | Chr8:16689280-16689299 | None:intergenic | 30.0% | |
| GGTAAACTCTTAGATACTTT+AGG | - | Chr8:16688872-16688891 | MsG0880042958.01.T02:intron | 30.0% | |
| GTTATCTGTGACCATATATA+TGG | - | Chr8:16690099-16690118 | MsG0880042958.01.T02:CDS | 30.0% | |
| TAACATCCTATCAATTAAGC+AGG | - | Chr8:16689271-16689290 | MsG0880042958.01.T02:intron | 30.0% | |
| TACATACACAATTAAACTCG+AGG | - | Chr8:16689063-16689082 | MsG0880042958.01.T02:intron | 30.0% | |
| ! | ATGATAACCTTTTCAACCTA+AGG | + | Chr8:16688787-16688806 | None:intergenic | 30.0% |
| ! | CTCTAAAAAAACACTCAAAC+TGG | - | Chr8:16689218-16689237 | MsG0880042958.01.T02:intron | 30.0% |
| ! | TAATATGCCTCTTTTTGTAG+TGG | - | Chr8:16689745-16689764 | MsG0880042958.01.T02:intron | 30.0% |
| ! | TATCATTTACTTGTGATGGA+AGG | - | Chr8:16688669-16688688 | MsG0880042958.01.T02:intron | 30.0% |
| !!! | CAGTTTGAGTGTTTTTTTAG+AGG | + | Chr8:16689220-16689239 | None:intergenic | 30.0% |
| CATTGACACCATTGTGAAAA+TGG | + | Chr8:16688327-16688346 | None:intergenic | 35.0% | |
| GAAGATTATTCCCCTTGTTA+AGG | - | Chr8:16688126-16688145 | MsG0880042958.01.T02:three_prime_UTR | 35.0% | |
| GCTATATGAACCTCTTTGTT+TGG | + | Chr8:16689679-16689698 | None:intergenic | 35.0% | |
| GGTTTAACCACTACAAAAAG+AGG | + | Chr8:16689755-16689774 | None:intergenic | 35.0% | |
| TACATGACAACACATACCTT+AGG | - | Chr8:16688768-16688787 | MsG0880042958.01.T02:intron | 35.0% | |
| TGATGAAGAAGATGCTAAAG+AGG | - | Chr8:16688491-16688510 | MsG0880042958.01.T02:intron | 35.0% | |
| TGATTCTTGACATCAAGATC+TGG | + | Chr8:16688526-16688545 | None:intergenic | 35.0% | |
| TTGTAGATAGGATAGTGTTG+AGG | - | Chr8:16688406-16688425 | MsG0880042958.01.T02:intron | 35.0% | |
| TTTCAGTGAAGATAGATGCA+GGG | - | Chr8:16689603-16689622 | MsG0880042958.01.T02:CDS | 35.0% | |
| ! | AACCTCTTTGTTTGGATGTT+TGG | + | Chr8:16689671-16689690 | None:intergenic | 35.0% |
| ! | ACCTCTTTGTTTGGATGTTT+GGG | + | Chr8:16689670-16689689 | None:intergenic | 35.0% |
| ! | ACGTGCATTTTCCTTAACAA+GGG | + | Chr8:16688140-16688159 | None:intergenic | 35.0% |
| ! | AGGTCTTTTATCGCAGTTTA+AGG | - | Chr8:16688598-16688617 | MsG0880042958.01.T02:intron | 35.0% |
| !! | ACACATACCTTAGGTTGAAA+AGG | - | Chr8:16688777-16688796 | MsG0880042958.01.T02:intron | 35.0% |
| !! | ACTTTAGGGTTTAGTCGTAT+CGG | - | Chr8:16688887-16688906 | MsG0880042958.01.T02:intron | 35.0% |
| !! | TGTGTTCATGTTGTTTCTGT+TGG | - | Chr8:16690047-16690066 | MsG0880042958.01.T02:CDS | 35.0% |
| AACCACATGAATGAAGGCAA+TGG | - | Chr8:16688571-16688590 | MsG0880042958.01.T02:intron | 40.0% | |
| ACTAGCTAGTGTTAAGCCAT+GGG | - | Chr8:16689909-16689928 | MsG0880042958.01.T02:intron | 40.0% | |
| ACTTGACTCAACCAAGACTT+TGG | + | Chr8:16688062-16688081 | None:intergenic | 40.0% | |
| ATCTACAAAAGAGTCCTCAC+TGG | + | Chr8:16688394-16688413 | None:intergenic | 40.0% | |
| CTACATCATGCACTTCCTAA+AGG | - | Chr8:16688194-16688213 | MsG0880042958.01.T02:three_prime_UTR | 40.0% | |
| CTTTCAGTGAAGATAGATGC+AGG | - | Chr8:16689602-16689621 | MsG0880042958.01.T02:CDS | 40.0% | |
| TACTAGCTAGTGTTAAGCCA+TGG | - | Chr8:16689908-16689927 | MsG0880042958.01.T02:intron | 40.0% | |
| TCCCAAACATCCAAACAAAG+AGG | - | Chr8:16689666-16689685 | MsG0880042958.01.T02:CDS | 40.0% | |
| TCGAGGACATCCGATAAAAT+TGG | + | Chr8:16688987-16689006 | None:intergenic | 40.0% | |
| TCTTGACATCAAGATCTGGA+TGG | + | Chr8:16688522-16688541 | None:intergenic | 40.0% | |
| TTATTCTGCAGCCAAAGTCT+TGG | - | Chr8:16688048-16688067 | MsG0880042958.01.T02:three_prime_UTR | 40.0% | |
| ! | CGTGCATTTTCCTTAACAAG+GGG | + | Chr8:16688139-16688158 | None:intergenic | 40.0% |
| ! | GACGTGCATTTTCCTTAACA+AGG | + | Chr8:16688141-16688160 | None:intergenic | 40.0% |
| ! | GTGAGGACTCTTTTGTAGAT+AGG | - | Chr8:16688394-16688413 | MsG0880042958.01.T02:intron | 40.0% |
| ! | TACTTGTGATGGAAGGTTTG+TGG | - | Chr8:16688676-16688695 | MsG0880042958.01.T02:intron | 40.0% |
| ! | TTTTATCGGATGTCCTCGAA+AGG | - | Chr8:16688988-16689007 | MsG0880042958.01.T02:intron | 40.0% |
| !! | TAACCTTTCTGGTTTGTTGC+AGG | - | Chr8:16689885-16689904 | MsG0880042958.01.T02:intron | 40.0% |
| AGATAACAGTGACACTCCCA+TGG | + | Chr8:16689928-16689947 | None:intergenic | 45.0% | |
| AGCCATTGCCTTCATTCATG+TGG | + | Chr8:16688576-16688595 | None:intergenic | 45.0% | |
| GCTTCATAGTTTGACCAGTG+AGG | - | Chr8:16688377-16688396 | MsG0880042958.01.T02:intron | 45.0% | |
| GTACCTGCAACAAACCAGAA+AGG | + | Chr8:16689891-16689910 | None:intergenic | 45.0% | |
| TGAATGAAGGCAATGGCTCA+AGG | - | Chr8:16688578-16688597 | MsG0880042958.01.T02:intron | 45.0% | |
| !! | ATGGGAGTGTCACTGTTATC+TGG | - | Chr8:16689927-16689946 | MsG0880042958.01.T02:intron | 45.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr8 | gene | 16688037 | 16690151 | 16688037 | ID=MsG0880042958.01;Name=MsG0880042958.01 |
| Chr8 | mRNA | 16688037 | 16690151 | 16688037 | ID=MsG0880042958.01.T01;Parent=MsG0880042958.01;Name=MsG0880042958.01.T01;_AED=0.43;_eAED=0.43;_QI=0|1|1|1|0.5|0.2|5|246|90 |
| Chr8 | CDS | 16690008 | 16690151 | 16690008 | ID=MsG0880042958.01.T01:cds;Parent=MsG0880042958.01.T01 |
| Chr8 | CDS | 16689570 | 16689698 | 16689570 | ID=MsG0880042958.01.T01:cds;Parent=MsG0880042958.01.T01 |
| Chr8 | three_prime_UTR | 16689569 | 16689569 | 16689569 | ID=MsG0880042958.01.T01:three_prime_utr;Parent=MsG0880042958.01.T01 |
| Chr8 | three_prime_UTR | 16688037 | 16688281 | 16688037 | ID=MsG0880042958.01.T01:three_prime_utr;Parent=MsG0880042958.01.T01 |
| Chr8 | mRNA | 16688037 | 16690151 | 16688037 | ID=MsG0880042958.01.T02;Parent=MsG0880042958.01;Name=MsG0880042958.01.T02;_AED=0.43;_eAED=0.43;_QI=0|1|1|1|0.66|0.25|4|246|90 |
| Chr8 | CDS | 16690008 | 16690151 | 16690008 | ID=MsG0880042958.01.T02:cds;Parent=MsG0880042958.01.T02 |
| Chr8 | CDS | 16689570 | 16689698 | 16689570 | ID=MsG0880042958.01.T02:cds;Parent=MsG0880042958.01.T02 |
| Chr8 | three_prime_UTR | 16689569 | 16689569 | 16689569 | ID=MsG0880042958.01.T02:three_prime_utr;Parent=MsG0880042958.01.T02 |
| Chr8 | three_prime_UTR | 16688037 | 16688281 | 16688037 | ID=MsG0880042958.01.T02:three_prime_utr;Parent=MsG0880042958.01.T02 |
| Gene Sequence |
| Protein sequence |
