Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680034328.01.T01 | XP_004497487.1 | 74.297 | 498 | 128 | 0 | 1 | 498 | 59 | 556 | 0 | 800 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680034328.01.T01 | B9SCB6 | 53.131 | 495 | 229 | 1 | 2 | 496 | 59 | 550 | 0 | 573 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680034328.01.T01 | A0A1S2Y0Q7 | 74.297 | 498 | 128 | 0 | 1 | 498 | 59 | 556 | 0.0 | 800 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0680034293.01 | MsG0680034328.01 | 0.860708 | 1.710335e-63 | 4.719113e-60 |
| MsG0680034295.01 | MsG0680034328.01 | 0.846805 | 1.724542e-59 | 3.003782e-56 |
| MsG0680034298.01 | MsG0680034328.01 | 0.813396 | 2.614403e-51 | 1.705435e-48 |
| MsG0680034299.01 | MsG0680034328.01 | 0.813203 | 2.882578e-51 | 1.870333e-48 |
| MsG0680034306.01 | MsG0680034328.01 | 0.869354 | 3.296540e-66 | 1.233619e-62 |
| MsG0680034307.01 | MsG0680034328.01 | 0.827178 | 1.805961e-54 | 1.730342e-51 |
| MsG0680034321.01 | MsG0680034328.01 | 0.914246 | 2.400367e-84 | 5.908165e-80 |
| MsG0680034325.01 | MsG0680034328.01 | 0.870852 | 1.066981e-66 | 4.213478e-63 |
| MsG0680034326.01 | MsG0680034328.01 | 0.915053 | 9.285719e-85 | 2.381427e-80 |
| MsG0680034328.01 | MsG0680034329.01 | 0.938632 | 4.876460e-99 | 4.765203e-94 |
| MsG0680034328.01 | MsG0680034334.01 | 0.801186 | 1.013933e-48 | 4.811526e-46 |
| MsG0680034328.01 | MsG0680034348.01 | 0.875809 | 2.299759e-68 | 1.088974e-64 |
| MsG0680034328.01 | MsG0680034351.01 | 0.824300 | 8.696439e-54 | 7.671986e-51 |
| MsG0680034328.01 | MsG0680034352.01 | 0.844073 | 9.471675e-59 | 1.511829e-55 |
| MsG0680034328.01 | MsG0680034354.01 | 0.824661 | 7.151135e-54 | 6.375981e-51 |
| MsG0680034328.01 | MsG0680034356.01 | 0.817252 | 3.630668e-52 | 2.630543e-49 |
| MsG0680034328.01 | MsG0680034357.01 | 0.802624 | 5.136188e-49 | 2.527889e-46 |
| MsG0680034328.01 | MsG0680034366.01 | 0.895227 | 1.170723e-75 | 1.203942e-71 |
| MsG0680034328.01 | MsG0680034367.01 | 0.888377 | 6.232456e-73 | 4.817066e-69 |
| MsG0680034328.01 | MsG0680034369.01 | 0.844879 | 5.751623e-59 | 9.414718e-56 |
| MsG0680034328.01 | MsG0780039855.01 | 0.804424 | 2.174839e-49 | 1.120899e-46 |
| MsG0680034328.01 | MsG0780040498.01 | 0.812012 | 5.251905e-51 | 3.300928e-48 |
| MsG0680034328.01 | MsG0880046273.01 | 0.814694 | 1.351992e-51 | 9.134644e-49 |
| MsG0480021133.01 | MsG0680034328.01 | 0.805634 | 1.214051e-49 | 6.455606e-47 |
| MsG0380016299.01 | MsG0680034328.01 | 0.806322 | 8.702206e-50 | 4.709391e-47 |
| MsG0280009232.01 | MsG0680034328.01 | 0.803849 | 2.864659e-49 | 1.454896e-46 |
PPI
| Gene1 | Gene2 | Type |
|---|---|---|
| MsG0680034328.01 | MsG0280009520.01 | PPI |
| MsG0880044118.01 | MsG0680034328.01 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680034328.01.T01 | MTR_6g039440 | 69.277 | 498 | 153 | 0 | 1 | 498 | 56 | 553 | 0.0 | 735 |
| MsG0680034328.01.T01 | MTR_5g062230 | 69.277 | 498 | 153 | 0 | 1 | 498 | 56 | 553 | 0.0 | 733 |
| MsG0680034328.01.T01 | MTR_6g008560 | 67.742 | 496 | 160 | 0 | 3 | 498 | 62 | 557 | 0.0 | 726 |
| MsG0680034328.01.T01 | MTR_3g464190 | 67.134 | 499 | 163 | 1 | 1 | 498 | 59 | 557 | 0.0 | 712 |
| MsG0680034328.01.T01 | MTR_4g048460 | 67.269 | 498 | 163 | 0 | 1 | 498 | 64 | 561 | 0.0 | 705 |
| MsG0680034328.01.T01 | MTR_5g073200 | 67.002 | 497 | 163 | 1 | 1 | 496 | 51 | 547 | 0.0 | 690 |
| MsG0680034328.01.T01 | MTR_5g073260 | 65.795 | 497 | 169 | 1 | 3 | 498 | 56 | 552 | 0.0 | 685 |
| MsG0680034328.01.T01 | MTR_5g094620 | 63.855 | 498 | 161 | 1 | 1 | 498 | 59 | 537 | 0.0 | 669 |
| MsG0680034328.01.T01 | MTR_4g081460 | 59.184 | 490 | 200 | 0 | 9 | 498 | 73 | 562 | 0.0 | 625 |
| MsG0680034328.01.T01 | MTR_6g008560 | 66.085 | 401 | 136 | 0 | 98 | 498 | 1 | 401 | 0.0 | 574 |
| MsG0680034328.01.T01 | MTR_4g048460 | 66.584 | 401 | 134 | 0 | 1 | 401 | 64 | 464 | 0.0 | 558 |
| MsG0680034328.01.T01 | MTR_8g007515 | 45.842 | 493 | 260 | 5 | 11 | 498 | 66 | 556 | 1.01e-159 | 465 |
| MsG0680034328.01.T01 | MTR_2g082010 | 44.223 | 502 | 274 | 6 | 1 | 498 | 69 | 568 | 4.79e-158 | 461 |
| MsG0680034328.01.T01 | MTR_2g081980 | 45.951 | 494 | 259 | 8 | 11 | 498 | 66 | 557 | 3.58e-157 | 458 |
| MsG0680034328.01.T01 | MTR_2g082060 | 43.725 | 494 | 259 | 8 | 11 | 498 | 73 | 553 | 3.44e-145 | 428 |
| MsG0680034328.01.T01 | MTR_4g019550 | 41.767 | 498 | 267 | 7 | 11 | 498 | 74 | 558 | 1.43e-133 | 398 |
| MsG0680034328.01.T01 | MTR_2g082050 | 39.014 | 487 | 238 | 8 | 13 | 496 | 27 | 457 | 1.64e-121 | 364 |
| MsG0680034328.01.T01 | MTR_4g045810 | 36.327 | 490 | 308 | 2 | 11 | 496 | 90 | 579 | 2.70e-110 | 339 |
| MsG0680034328.01.T01 | MTR_2g089130 | 35.368 | 475 | 292 | 4 | 6 | 476 | 81 | 544 | 1.03e-101 | 316 |
| MsG0680034328.01.T01 | MTR_2g064425 | 36.273 | 499 | 308 | 6 | 1 | 496 | 93 | 584 | 3.76e-100 | 313 |
| MsG0680034328.01.T01 | MTR_2g089120 | 35.095 | 473 | 291 | 5 | 9 | 476 | 84 | 545 | 5.21e-100 | 312 |
| MsG0680034328.01.T01 | MTR_8g057020 | 33.534 | 498 | 324 | 4 | 1 | 496 | 95 | 587 | 1.80e-92 | 293 |
| MsG0680034328.01.T01 | MTR_2g065450 | 33.467 | 499 | 323 | 5 | 1 | 496 | 96 | 588 | 6.74e-90 | 286 |
| MsG0680034328.01.T01 | MTR_2g064425 | 34.469 | 499 | 302 | 7 | 1 | 496 | 93 | 569 | 8.26e-90 | 286 |
| MsG0680034328.01.T01 | MTR_4g092020 | 33.806 | 494 | 318 | 5 | 7 | 496 | 81 | 569 | 5.65e-89 | 283 |
| MsG0680034328.01.T01 | MTR_7g057340 | 66.860 | 172 | 57 | 0 | 327 | 498 | 1 | 172 | 9.18e-85 | 259 |
| MsG0680034328.01.T01 | MTR_4g092010 | 30.801 | 487 | 324 | 6 | 11 | 490 | 76 | 556 | 9.39e-81 | 262 |
| MsG0680034328.01.T01 | MTR_2g064425 | 43.125 | 320 | 174 | 4 | 1 | 318 | 93 | 406 | 1.22e-80 | 258 |
| MsG0680034328.01.T01 | MTR_7g010710 | 31.837 | 490 | 327 | 4 | 10 | 495 | 66 | 552 | 2.03e-79 | 258 |
| MsG0680034328.01.T01 | MTR_7g057390 | 64.535 | 172 | 58 | 1 | 327 | 498 | 1 | 169 | 3.94e-78 | 242 |
| MsG0680034328.01.T01 | MTR_5g094530 | 55.708 | 219 | 59 | 4 | 108 | 323 | 1 | 184 | 1.94e-73 | 230 |
| MsG0680034328.01.T01 | MTR_2g010960 | 28.911 | 505 | 334 | 8 | 2 | 489 | 22 | 518 | 7.80e-72 | 237 |
| MsG0680034328.01.T01 | MTR_2g064425 | 40.312 | 320 | 168 | 5 | 1 | 318 | 93 | 391 | 1.59e-70 | 231 |
| MsG0680034328.01.T01 | MTR_6g064980 | 29.424 | 486 | 331 | 7 | 5 | 481 | 21 | 503 | 2.08e-68 | 228 |
| MsG0680034328.01.T01 | MTR_3g465090 | 29.498 | 478 | 331 | 5 | 5 | 476 | 21 | 498 | 3.07e-68 | 228 |
| MsG0680034328.01.T01 | MTR_3g063170 | 29.202 | 476 | 325 | 7 | 5 | 471 | 21 | 493 | 1.99e-67 | 226 |
| MsG0680034328.01.T01 | MTR_3g063120 | 28.513 | 491 | 340 | 8 | 10 | 492 | 1 | 488 | 1.40e-66 | 223 |
| MsG0680034328.01.T01 | MTR_3g052120 | 29.352 | 494 | 339 | 8 | 6 | 492 | 22 | 512 | 2.64e-65 | 220 |
| MsG0680034328.01.T01 | MTR_3g063140 | 28.782 | 476 | 327 | 7 | 5 | 471 | 21 | 493 | 2.37e-64 | 218 |
| MsG0680034328.01.T01 | MTR_7g050990 | 59.639 | 166 | 56 | 2 | 141 | 306 | 27 | 181 | 2.40e-56 | 202 |
| MsG0680034328.01.T01 | MTR_6g065040 | 29.008 | 393 | 268 | 6 | 87 | 471 | 2 | 391 | 5.06e-55 | 189 |
| MsG0680034328.01.T01 | MTR_3g015080 | 48.256 | 172 | 51 | 2 | 327 | 498 | 1 | 134 | 3.70e-47 | 160 |
| MsG0680034328.01.T01 | MTR_3g058160 | 25.577 | 520 | 337 | 15 | 12 | 496 | 65 | 569 | 8.38e-38 | 146 |
| MsG0680034328.01.T01 | MTR_3g058160 | 25.577 | 520 | 337 | 15 | 12 | 496 | 256 | 760 | 2.07e-37 | 146 |
| MsG0680034328.01.T01 | MTR_3g058160 | 25.577 | 520 | 337 | 15 | 12 | 496 | 269 | 773 | 2.14e-37 | 146 |
| MsG0680034328.01.T01 | MTR_3g058160 | 25.577 | 520 | 337 | 15 | 12 | 496 | 276 | 780 | 2.26e-37 | 146 |
| MsG0680034328.01.T01 | MTR_3g063160 | 31.227 | 269 | 181 | 4 | 5 | 270 | 21 | 288 | 1.00e-35 | 134 |
| MsG0680034328.01.T01 | MTR_2g064295 | 24.521 | 522 | 340 | 16 | 12 | 496 | 256 | 760 | 1.08e-35 | 141 |
| MsG0680034328.01.T01 | MTR_3g058160 | 24.954 | 541 | 335 | 16 | 12 | 496 | 276 | 801 | 1.13e-34 | 139 |
| MsG0680034328.01.T01 | MTR_2g012870 | 23.379 | 509 | 358 | 14 | 12 | 496 | 254 | 754 | 3.35e-30 | 125 |
| MsG0680034328.01.T01 | MTR_2g012900 | 24.342 | 456 | 300 | 15 | 10 | 428 | 252 | 699 | 4.86e-28 | 119 |
| MsG0680034328.01.T01 | MTR_7g011663 | 30.292 | 274 | 159 | 6 | 10 | 252 | 344 | 616 | 3.15e-24 | 107 |
| MsG0680034328.01.T01 | MTR_7g094970 | 27.273 | 275 | 168 | 6 | 10 | 255 | 206 | 477 | 6.76e-24 | 105 |
| MsG0680034328.01.T01 | MTR_5g030050 | 28.409 | 264 | 156 | 7 | 15 | 254 | 3 | 257 | 1.65e-21 | 95.5 |
| MsG0680034328.01.T01 | MTR_7g011770 | 28.669 | 293 | 180 | 7 | 10 | 274 | 240 | 531 | 1.79e-21 | 98.6 |
| MsG0680034328.01.T01 | MTR_5g081730 | 36.364 | 110 | 65 | 1 | 95 | 199 | 2 | 111 | 1.55e-12 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680034328.01.T01 | AT5G23960 | 39.920 | 501 | 293 | 4 | 2 | 498 | 49 | 545 | 1.76e-138 | 410 |
| MsG0680034328.01.T01 | AT5G23960 | 39.881 | 504 | 291 | 6 | 2 | 498 | 49 | 547 | 2.31e-137 | 407 |
| MsG0680034328.01.T01 | AT1G70080 | 38.289 | 491 | 295 | 5 | 15 | 498 | 122 | 611 | 3.90e-123 | 373 |
| MsG0680034328.01.T01 | AT3G14490 | 37.897 | 504 | 303 | 5 | 1 | 498 | 102 | 601 | 6.60e-119 | 362 |
| MsG0680034328.01.T01 | AT3G14520 | 36.508 | 504 | 311 | 4 | 1 | 498 | 104 | 604 | 5.02e-118 | 360 |
| MsG0680034328.01.T01 | AT1G31950 | 36.581 | 503 | 310 | 4 | 2 | 498 | 108 | 607 | 2.93e-117 | 358 |
| MsG0680034328.01.T01 | AT1G31950 | 36.581 | 503 | 310 | 4 | 2 | 498 | 107 | 606 | 3.49e-117 | 358 |
| MsG0680034328.01.T01 | AT3G14540 | 36.779 | 503 | 311 | 3 | 1 | 498 | 101 | 601 | 9.26e-116 | 354 |
| MsG0680034328.01.T01 | AT3G29410 | 35.600 | 500 | 318 | 3 | 1 | 498 | 1 | 498 | 1.29e-112 | 342 |
| MsG0680034328.01.T01 | AT5G44630 | 36.235 | 494 | 306 | 5 | 7 | 496 | 67 | 555 | 1.24e-111 | 342 |
| MsG0680034328.01.T01 | AT3G29410 | 35.600 | 500 | 318 | 3 | 1 | 498 | 106 | 603 | 3.83e-111 | 342 |
| MsG0680034328.01.T01 | AT4G20200 | 35.758 | 495 | 306 | 7 | 11 | 498 | 115 | 604 | 1.20e-110 | 341 |
| MsG0680034328.01.T01 | AT4G20210 | 34.538 | 498 | 316 | 5 | 7 | 498 | 107 | 600 | 1.26e-108 | 335 |
| MsG0680034328.01.T01 | AT3G32030 | 33.733 | 501 | 326 | 4 | 2 | 498 | 106 | 604 | 8.19e-107 | 331 |
| MsG0680034328.01.T01 | AT1G33750 | 34.200 | 500 | 324 | 3 | 1 | 498 | 107 | 603 | 1.42e-106 | 330 |
| MsG0680034328.01.T01 | AT4G13300 | 34.809 | 497 | 316 | 5 | 7 | 498 | 61 | 554 | 6.70e-106 | 327 |
| MsG0680034328.01.T01 | AT4G13280 | 34.238 | 479 | 307 | 5 | 25 | 498 | 79 | 554 | 2.01e-102 | 318 |
| MsG0680034328.01.T01 | AT4G15870 | 34.325 | 504 | 310 | 7 | 1 | 498 | 110 | 598 | 2.51e-102 | 319 |
| MsG0680034328.01.T01 | AT3G29190 | 33.065 | 496 | 318 | 6 | 11 | 498 | 112 | 601 | 3.03e-102 | 319 |
| MsG0680034328.01.T01 | AT4G20230 | 33.878 | 490 | 313 | 6 | 12 | 494 | 116 | 601 | 1.14e-99 | 312 |
| MsG0680034328.01.T01 | AT4G20230 | 33.878 | 490 | 313 | 6 | 12 | 494 | 128 | 613 | 1.14e-99 | 313 |
| MsG0680034328.01.T01 | AT1G31950 | 37.799 | 418 | 251 | 4 | 2 | 413 | 108 | 522 | 5.92e-99 | 308 |
| MsG0680034328.01.T01 | AT3G14540 | 38.386 | 409 | 246 | 2 | 1 | 405 | 101 | 507 | 3.53e-98 | 305 |
| MsG0680034328.01.T01 | AT3G29110 | 34.647 | 482 | 309 | 5 | 19 | 496 | 116 | 595 | 1.30e-95 | 301 |
| MsG0680034328.01.T01 | AT2G23230 | 34.132 | 501 | 318 | 7 | 1 | 493 | 99 | 595 | 6.55e-95 | 300 |
| MsG0680034328.01.T01 | AT1G66020 | 33.130 | 492 | 323 | 4 | 11 | 498 | 109 | 598 | 2.94e-94 | 298 |
| MsG0680034328.01.T01 | AT4G16730 | 32.094 | 511 | 326 | 8 | 3 | 498 | 35 | 539 | 7.37e-93 | 293 |
| MsG0680034328.01.T01 | AT2G23230 | 33.932 | 501 | 314 | 8 | 1 | 493 | 99 | 590 | 2.22e-92 | 293 |
| MsG0680034328.01.T01 | AT4G16730 | 32.465 | 499 | 316 | 8 | 15 | 498 | 1 | 493 | 1.84e-91 | 288 |
| MsG0680034328.01.T01 | AT4G13280 | 33.194 | 479 | 282 | 7 | 25 | 498 | 79 | 524 | 1.20e-90 | 286 |
| MsG0680034328.01.T01 | AT1G48800 | 32.582 | 488 | 316 | 7 | 15 | 494 | 120 | 602 | 3.97e-90 | 287 |
| MsG0680034328.01.T01 | AT1G61680 | 32.389 | 494 | 322 | 4 | 1 | 488 | 82 | 569 | 3.14e-87 | 279 |
| MsG0680034328.01.T01 | AT5G48110 | 37.318 | 343 | 210 | 5 | 157 | 498 | 1 | 339 | 8.94e-85 | 265 |
| MsG0680034328.01.T01 | AT4G16740 | 32.613 | 509 | 320 | 10 | 2 | 498 | 67 | 564 | 9.91e-85 | 272 |
| MsG0680034328.01.T01 | AT1G61680 | 31.984 | 494 | 317 | 5 | 1 | 488 | 82 | 562 | 5.83e-84 | 270 |
| MsG0680034328.01.T01 | AT2G24210 | 31.703 | 511 | 329 | 10 | 1 | 498 | 87 | 590 | 1.10e-80 | 262 |
| MsG0680034328.01.T01 | AT3G25810 | 30.920 | 511 | 330 | 9 | 5 | 498 | 93 | 597 | 5.10e-80 | 261 |
| MsG0680034328.01.T01 | AT1G48820 | 30.986 | 497 | 294 | 10 | 1 | 491 | 104 | 557 | 5.35e-77 | 252 |
| MsG0680034328.01.T01 | AT3G25830 | 30.333 | 511 | 339 | 11 | 1 | 498 | 88 | 594 | 7.04e-75 | 247 |
| MsG0680034328.01.T01 | AT3G25820 | 30.333 | 511 | 339 | 11 | 1 | 498 | 88 | 594 | 7.04e-75 | 247 |
| MsG0680034328.01.T01 | AT4G16740 | 36.145 | 332 | 195 | 5 | 2 | 323 | 67 | 391 | 4.78e-65 | 216 |
| MsG0680034328.01.T01 | AT1G66020 | 36.190 | 315 | 195 | 4 | 11 | 321 | 109 | 421 | 8.35e-64 | 214 |
| MsG0680034328.01.T01 | AT3G25820 | 32.840 | 338 | 217 | 7 | 1 | 331 | 88 | 422 | 2.20e-56 | 194 |
| MsG0680034328.01.T01 | AT4G16740 | 36.655 | 281 | 162 | 4 | 2 | 272 | 67 | 341 | 7.50e-55 | 188 |
| MsG0680034328.01.T01 | AT4G16740 | 36.655 | 281 | 162 | 4 | 2 | 272 | 67 | 341 | 7.50e-55 | 188 |
| MsG0680034328.01.T01 | AT3G25820 | 33.813 | 278 | 176 | 5 | 1 | 272 | 88 | 363 | 3.40e-49 | 174 |
| MsG0680034328.01.T01 | AT3G25820 | 33.813 | 278 | 176 | 5 | 1 | 272 | 88 | 363 | 3.40e-49 | 174 |
| MsG0680034328.01.T01 | AT1G79460 | 24.715 | 526 | 337 | 20 | 12 | 498 | 274 | 779 | 1.01e-31 | 130 |
| MsG0680034328.01.T01 | AT1G61120 | 23.379 | 509 | 360 | 10 | 10 | 498 | 286 | 784 | 5.64e-27 | 115 |
| MsG0680034328.01.T01 | AT4G02780 | 28.846 | 260 | 157 | 5 | 10 | 242 | 329 | 587 | 5.54e-23 | 103 |
Find 83 sgRNAs with CRISPR-Local
Find 156 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTCTCTTGCTGTGCTATTT+AGG | 0.103456 | 6:-85782883 | MsG0680034328.01.T01:CDS |
| TCTACTTGCATTGGCAAAAT+TGG | 0.119753 | 6:-85782002 | MsG0680034328.01.T01:CDS |
| TTCTCTTGCTGTGCTATTTA+GGG | 0.189824 | 6:-85782882 | MsG0680034328.01.T01:CDS |
| TTTCCTTGCTTGAGAATATT+GGG | 0.241792 | 6:+85781729 | None:intergenic |
| ATGCAAGTAGAATTTCATTA+TGG | 0.248221 | 6:+85782014 | None:intergenic |
| AGCCTACATCAAAAGGAATT+TGG | 0.257080 | 6:-85781962 | MsG0680034328.01.T01:CDS |
| TACAAGAGTTATGTTCAAAA+TGG | 0.269625 | 6:-85782932 | MsG0680034328.01.T01:CDS |
| CTGCTATACATTGCAGGCTT+AGG | 0.276774 | 6:-85780248 | MsG0680034328.01.T01:CDS |
| AGACGAAATTAATCAAGTTT+TGG | 0.301364 | 6:-85782963 | MsG0680034328.01.T01:CDS |
| GTCATCAATGTATGATAAAA+TGG | 0.310334 | 6:+85781687 | None:intergenic |
| TAATTGCTTGGAGGATCTTC+CGG | 0.335446 | 6:-85781325 | MsG0680034328.01.T01:CDS |
| TGAGGGAATATGATTTGAAT+AGG | 0.340079 | 6:-85780043 | MsG0680034328.01.T01:CDS |
| TTCCTTGCTCGTCCTTGAAT+TGG | 0.345275 | 6:+85782290 | None:intergenic |
| GAGTAGTAGAATGTTGCTTT+TGG | 0.347068 | 6:-85781774 | MsG0680034328.01.T01:CDS |
| ATGCTGCTGCTATACATTGC+AGG | 0.354080 | 6:-85780254 | MsG0680034328.01.T01:CDS |
| AGGACATGTTTCTTCGTACT+TGG | 0.361077 | 6:-85780075 | MsG0680034328.01.T01:CDS |
| TGCAAGTAGAATTTCATTAT+GGG | 0.387262 | 6:+85782015 | None:intergenic |
| CGTACTTGGAATGTTATATG+AGG | 0.388936 | 6:-85780061 | MsG0680034328.01.T01:CDS |
| GGATGAATCTTGCTCATAGA+TGG | 0.390050 | 6:+85782036 | None:intergenic |
| GATTGACTCAATATGTCGTT+TGG | 0.390339 | 6:-85783005 | MsG0680034328.01.T01:CDS |
| TAAAGCAACTTCGTGTAATC+CGG | 0.404734 | 6:+85781306 | None:intergenic |
| GTTGCTTTATAAATCACTCT+TGG | 0.404999 | 6:-85781292 | MsG0680034328.01.T01:CDS |
| AATAAATACTCAAATTTCTA+CGG | 0.417455 | 6:+85779809 | None:intergenic |
| TGCATGTACTCCTCTGTTGT+TGG | 0.418606 | 6:+85780393 | None:intergenic |
| AAAAGAAAATTGACAACGCT+TGG | 0.444020 | 6:-85779998 | MsG0680034328.01.T01:CDS |
| TGCTATACATTGCAGGCTTA+GGG | 0.448464 | 6:-85780247 | MsG0680034328.01.T01:CDS |
| GCTCCAAAGCCTACATCAAA+AGG | 0.450495 | 6:-85781969 | MsG0680034328.01.T01:CDS |
| TAGGTGGGATATTAATTGCT+TGG | 0.452782 | 6:-85781337 | MsG0680034328.01.T01:CDS |
| TACGACTTCTTACATTGGAA+TGG | 0.454510 | 6:-85780334 | MsG0680034328.01.T01:CDS |
| ATAGTTAGCATTCAGCCATC+TGG | 0.458951 | 6:+85780419 | None:intergenic |
| TAATGAAATTCTACTTGCAT+TGG | 0.460272 | 6:-85782011 | MsG0680034328.01.T01:CDS |
| ACGACTTCTTACATTGGAAT+GGG | 0.460983 | 6:-85780333 | MsG0680034328.01.T01:CDS |
| TTCTGGTCACCTTCAGTCCA+TGG | 0.466911 | 6:-85782158 | MsG0680034328.01.T01:CDS |
| GATGACACATATGATGCATA+TGG | 0.467097 | 6:-85781670 | MsG0680034328.01.T01:CDS |
| GAGCAAGAAATGAAGAAAGA+AGG | 0.470516 | 6:-85781252 | MsG0680034328.01.T01:CDS |
| ATTGACTCAATATGTCGTTT+GGG | 0.473862 | 6:-85783004 | MsG0680034328.01.T01:CDS |
| GAGGGAATATGATTTGAATA+GGG | 0.475500 | 6:-85780042 | MsG0680034328.01.T01:CDS |
| ATAAATACTCAAATTTCTAC+GGG | 0.477038 | 6:+85779810 | None:intergenic |
| TTGCAAGAGAAGGACTCAAT+CGG | 0.484754 | 6:+85782131 | None:intergenic |
| CGCTTGGAAAGATATAAATC+AGG | 0.490061 | 6:-85779982 | MsG0680034328.01.T01:CDS |
| TTGAGAACACACGTAAGAAT+AGG | 0.491590 | 6:+85779930 | None:intergenic |
| ATATTGGGGCTCAAAATATA+CGG | 0.495144 | 6:+85781744 | None:intergenic |
| CTGTGCTATTTAGGGTGTTG+AGG | 0.502767 | 6:-85782874 | MsG0680034328.01.T01:CDS |
| CAACAAAAGACATCTTTGAC+TGG | 0.510706 | 6:-85780302 | MsG0680034328.01.T01:CDS |
| CATGGACTTTACGTTTCACC+TGG | 0.512238 | 6:-85782848 | MsG0680034328.01.T01:intron |
| AGGACTCAATCGGGTGGCCA+TGG | 0.512884 | 6:+85782141 | None:intergenic |
| AGATGTGTTCAACCAATTCA+AGG | 0.513117 | 6:-85782302 | MsG0680034328.01.T01:CDS |
| TAACTTCTTGCCACTAGCCT+AGG | 0.521919 | 6:+85782064 | None:intergenic |
| GCCTCACATATGATGGTTCA+TGG | 0.522278 | 6:-85782214 | MsG0680034328.01.T01:CDS |
| TAAGAAGTCGTAGCCAACAC+TGG | 0.522936 | 6:+85780345 | None:intergenic |
| ATATAGGTGGTGGAAGGAGT+TGG | 0.524102 | 6:-85781830 | MsG0680034328.01.T01:intron |
| GTGGGATATTAATTGCTTGG+AGG | 0.529634 | 6:-85781334 | MsG0680034328.01.T01:CDS |
| ATAGGTAACGGAACTTCAGT+TGG | 0.529746 | 6:+85779948 | None:intergenic |
| TGGCCTCACTCATATAAGCT+TGG | 0.531321 | 6:+85780439 | None:intergenic |
| AACATTGGTCAGAGATGTTG+AGG | 0.533818 | 6:-85782257 | MsG0680034328.01.T01:CDS |
| TTCCTTGCTTGAGAATATTG+GGG | 0.534381 | 6:+85781730 | None:intergenic |
| AAACAGTTTGAGCAGAAAAG+AGG | 0.539017 | 6:-85780095 | MsG0680034328.01.T01:intron |
| TGCAAGAGAAGGACTCAATC+GGG | 0.546913 | 6:+85782132 | None:intergenic |
| AGCCCCAATATTCTCAAGCA+AGG | 0.547455 | 6:-85781732 | MsG0680034328.01.T01:CDS |
| CTTATATGAGTGAGGCCAGA+TGG | 0.549142 | 6:-85780434 | MsG0680034328.01.T01:CDS |
| TTTAGGGTGTTGAGGCAACA+TGG | 0.552007 | 6:-85782866 | MsG0680034328.01.T01:CDS |
| TTTACTTGTGTTGCAAGAGA+AGG | 0.558925 | 6:+85782121 | None:intergenic |
| ATCGGGTGGCCATGGACTGA+AGG | 0.566605 | 6:+85782149 | None:intergenic |
| GTACTTGGAATGTTATATGA+GGG | 0.567173 | 6:-85780060 | MsG0680034328.01.T01:CDS |
| GTATGAAGCCTCACATATGA+TGG | 0.567934 | 6:-85782221 | MsG0680034328.01.T01:CDS |
| ATCAAGTGGTTACCCAGTGT+TGG | 0.570889 | 6:-85780358 | MsG0680034328.01.T01:CDS |
| ATAGCACAGCAAGAGAATGA+AGG | 0.572946 | 6:+85782888 | None:intergenic |
| AGGAAACTTCAGTGAAACAT+TGG | 0.576091 | 6:-85782272 | MsG0680034328.01.T01:CDS |
| TTGGCTACGACTTCTTACAT+TGG | 0.586299 | 6:-85780339 | MsG0680034328.01.T01:CDS |
| CTTTATATATAGGTGGTGGA+AGG | 0.588928 | 6:-85781836 | MsG0680034328.01.T01:intron |
| ACTACTCTATCTCGTGCATA+CGG | 0.590301 | 6:+85781790 | None:intergenic |
| CACATATCAACAATATCAAG+TGG | 0.594145 | 6:-85780372 | MsG0680034328.01.T01:CDS |
| GATAACTACACACACTCTGA+CGG | 0.610210 | 6:-85779870 | MsG0680034328.01.T01:CDS |
| AACAAAAGACATCTTTGACT+GGG | 0.611831 | 6:-85780301 | MsG0680034328.01.T01:CDS |
| AAGAAGTCGTAGCCAACACT+GGG | 0.613680 | 6:+85780346 | None:intergenic |
| AACCAATTCAAGGACGAGCA+AGG | 0.615624 | 6:-85782292 | MsG0680034328.01.T01:CDS |
| ACCATGAACCATCATATGTG+AGG | 0.634158 | 6:+85782213 | None:intergenic |
| AATCCAAGCTTATATGAGTG+AGG | 0.644710 | 6:-85780442 | MsG0680034328.01.T01:CDS |
| ACATTGGTCAGAGATGTTGA+GGG | 0.666287 | 6:-85782256 | MsG0680034328.01.T01:CDS |
| GGATGAAATTGTGTCAAGCG+AGG | 0.675331 | 6:-85780226 | MsG0680034328.01.T01:intron |
| ACACACGTAAGAATAGGTAA+CGG | 0.686084 | 6:+85779936 | None:intergenic |
| AAGAGAAGGACTCAATCGGG+TGG | 0.695745 | 6:+85782135 | None:intergenic |
| TAACTATATACCAACAACAG+AGG | 0.703519 | 6:-85780403 | MsG0680034328.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATATAAAATAAACGTTAAT+AGG | + | Chr6:85782379-85782398 | None:intergenic | 10.0% |
| !!! | ATTTCATTTTAAATTTTGTA+TGG | - | Chr6:85781774-85781793 | MsG0680034328.01.T01:CDS | 10.0% |
| !!! | CATTAATTTTTATTCTTTTA+TGG | + | Chr6:85782151-85782170 | None:intergenic | 10.0% |
| !!! | CATTTTTTATGTTTTTAATT+TGG | - | Chr6:85780073-85780092 | MsG0680034328.01.T01:CDS | 10.0% |
| !!! | TATTTTTTGTCTTTATATAT+AGG | - | Chr6:85781021-85781040 | MsG0680034328.01.T01:intron | 10.0% |
| !! | ATAAAGACAAAAAATAGTAT+AGG | + | Chr6:85781017-85781036 | None:intergenic | 15.0% |
| !! | TAATATGAATGTCTAAAAAA+TGG | - | Chr6:85780205-85780224 | MsG0680034328.01.T01:intron | 15.0% |
| !! | TTAACAACATTTAATTACAT+AGG | - | Chr6:85782337-85782356 | MsG0680034328.01.T01:intron | 15.0% |
| !! | TTGTAGAATTAATATTACAA+AGG | + | Chr6:85782255-85782274 | None:intergenic | 15.0% |
| !!! | AAACATTTTTACATCATTTT+AGG | - | Chr6:85781875-85781894 | MsG0680034328.01.T01:intron | 15.0% |
| !!! | ATACTTTTATATTTTGATGT+AGG | + | Chr6:85780959-85780978 | None:intergenic | 15.0% |
| !!! | ATTGTTGTTTAATATTATTG+TGG | - | Chr6:85780524-85780543 | MsG0680034328.01.T01:intron | 15.0% |
| !!! | TTTAATTACATAGGTTTTTT+TGG | - | Chr6:85782346-85782365 | MsG0680034328.01.T01:intron | 15.0% |
| !! | GAGAATAATTAAAAGAAATG+AGG | + | Chr6:85780381-85780400 | None:intergenic | 20.0% |
| !!! | AAATTTTGTATGGTTATCAA+AGG | - | Chr6:85781784-85781803 | MsG0680034328.01.T01:CDS | 20.0% |
| !!! | AATCAAAATGATTTTTAGGT+GGG | - | Chr6:85781515-85781534 | MsG0680034328.01.T01:intron | 20.0% |
| !!! | AATTTTGTATGGTTATCAAA+GGG | - | Chr6:85781785-85781804 | MsG0680034328.01.T01:CDS | 20.0% |
| !!! | ATTGTTTTATCTCTAAAGTT+TGG | + | Chr6:85781312-85781331 | None:intergenic | 20.0% |
| !!! | CTTTTTACTAAAAGATTTAC+AGG | + | Chr6:85780245-85780264 | None:intergenic | 20.0% |
| !!! | TATCTTGACATTTTAATTAG+TGG | - | Chr6:85782281-85782300 | MsG0680034328.01.T01:CDS | 20.0% |
| !!! | TTGCAATCAAAATGATTTTT+AGG | - | Chr6:85781511-85781530 | MsG0680034328.01.T01:intron | 20.0% |
| !!! | TTTTTGTCTTTATATATAGG+TGG | - | Chr6:85781024-85781043 | MsG0680034328.01.T01:intron | 20.0% |
| ! | AAGAAAAATGTATCATCATG+AGG | - | Chr6:85782090-85782109 | MsG0680034328.01.T01:CDS | 25.0% |
| ! | ATGAAATCTTTGTTCAATTG+TGG | + | Chr6:85781761-85781780 | None:intergenic | 25.0% |
| ! | ATGCAAGTAGAATTTCATTA+TGG | + | Chr6:85780856-85780875 | None:intergenic | 25.0% |
| ! | CATTCAATCAAATAACTTCA+TGG | + | Chr6:85781953-85781972 | None:intergenic | 25.0% |
| ! | GTCATCAATGTATGATAAAA+TGG | + | Chr6:85781183-85781202 | None:intergenic | 25.0% |
| ! | TAATGAAATTCTACTTGCAT+TGG | - | Chr6:85780856-85780875 | MsG0680034328.01.T01:intron | 25.0% |
| ! | TACAAGAGTTATGTTCAAAA+TGG | - | Chr6:85779935-85779954 | MsG0680034328.01.T01:CDS | 25.0% |
| ! | TGCAAAAAACTTATTATCCA+TGG | - | Chr6:85782169-85782188 | MsG0680034328.01.T01:CDS | 25.0% |
| ! | TGCAAGTAGAATTTCATTAT+GGG | + | Chr6:85780855-85780874 | None:intergenic | 25.0% |
| ! | TTGAGTAAAACAAATTAGAG+TGG | - | Chr6:85780104-85780123 | MsG0680034328.01.T01:intron | 25.0% |
| !! | AATAAGTTGAGATATATACC+AGG | + | Chr6:85780040-85780059 | None:intergenic | 25.0% |
| !! | AGACGAAATTAATCAAGTTT+TGG | - | Chr6:85779904-85779923 | MsG0680034328.01.T01:CDS | 25.0% |
| !! | GTAATATTTGACTTTGTCAT+GGG | - | Chr6:85780176-85780195 | MsG0680034328.01.T01:intron | 25.0% |
| !! | TGAATTAGAACTTTTTACTC+AGG | - | Chr6:85781229-85781248 | MsG0680034328.01.T01:CDS | 25.0% |
| !! | TTCTTTTAACAATAGAGCAA+TGG | - | Chr6:85781482-85781501 | MsG0680034328.01.T01:intron | 25.0% |
| !!! | AACTCTTACTTCTTTTAAGA+AGG | + | Chr6:85781661-85781680 | None:intergenic | 25.0% |
| !!! | ACTCTTACTTCTTTTAAGAA+GGG | + | Chr6:85781660-85781679 | None:intergenic | 25.0% |
| !!! | CAATCAAAATGATTTTTAGG+TGG | - | Chr6:85781514-85781533 | MsG0680034328.01.T01:intron | 25.0% |
| !!! | TATCCATGGTTTTATTAACT+CGG | - | Chr6:85782028-85782047 | MsG0680034328.01.T01:CDS | 25.0% |
| !!! | TGTAAAAAACTTGTTATCCA+TGG | - | Chr6:85782014-85782033 | MsG0680034328.01.T01:CDS | 25.0% |
| AAAAGAAAATTGACAACGCT+TGG | - | Chr6:85782869-85782888 | MsG0680034328.01.T01:CDS | 30.0% | |
| AACAAAAGACATCTTTGACT+GGG | - | Chr6:85782566-85782585 | MsG0680034328.01.T01:intron | 30.0% | |
| ATATTGGGGCTCAAAATATA+CGG | + | Chr6:85781126-85781145 | None:intergenic | 30.0% | |
| ATGTGAACATTACACAGATA+AGG | + | Chr6:85780358-85780377 | None:intergenic | 30.0% | |
| CACATATCAACAATATCAAG+TGG | - | Chr6:85782495-85782514 | MsG0680034328.01.T01:intron | 30.0% | |
| GAGGGAATATGATTTGAATA+GGG | - | Chr6:85782825-85782844 | MsG0680034328.01.T01:intron | 30.0% | |
| GGTTCATGGTGAAAAAATAT+TGG | - | Chr6:85780667-85780686 | MsG0680034328.01.T01:intron | 30.0% | |
| GTACTTGGAATGTTATATGA+GGG | - | Chr6:85782807-85782826 | MsG0680034328.01.T01:intron | 30.0% | |
| TAACTATATACCAACAACAG+AGG | - | Chr6:85782464-85782483 | MsG0680034328.01.T01:intron | 30.0% | |
| TGAGGGAATATGATTTGAAT+AGG | - | Chr6:85782824-85782843 | MsG0680034328.01.T01:intron | 30.0% | |
| TGGTGAAAAAATATTGGAAG+AGG | - | Chr6:85780673-85780692 | MsG0680034328.01.T01:intron | 30.0% | |
| TTGTCTTTATATATAGGTGG+TGG | - | Chr6:85781027-85781046 | MsG0680034328.01.T01:intron | 30.0% | |
| TTTCCTTGCTTGAGAATATT+GGG | + | Chr6:85781141-85781160 | None:intergenic | 30.0% | |
| ! | AAAGTATCACCATAATGACT+TGG | - | Chr6:85781910-85781929 | MsG0680034328.01.T01:intron | 30.0% |
| ! | ATTGACTCAATATGTCGTTT+GGG | - | Chr6:85779863-85779882 | MsG0680034328.01.T01:CDS | 30.0% |
| ! | CGTAATATTTGACTTTGTCA+TGG | - | Chr6:85780175-85780194 | MsG0680034328.01.T01:intron | 30.0% |
| ! | GTTGCTTTATAAATCACTCT+TGG | - | Chr6:85781575-85781594 | MsG0680034328.01.T01:intron | 30.0% |
| ! | TCATGGAGATACATTTTTCT+TGG | + | Chr6:85781936-85781955 | None:intergenic | 30.0% |
| ! | TTCCAAATTCCTTTTGATGT+AGG | + | Chr6:85780910-85780929 | None:intergenic | 30.0% |
| ! | TTTCTTTTGGCATTCTTGAA+TGG | + | Chr6:85782857-85782876 | None:intergenic | 30.0% |
| ! | TTTTCCTTGCTTGAGAATAT+TGG | + | Chr6:85781142-85781161 | None:intergenic | 30.0% |
| ! | TTTTTACTCAGGCAATTGAA+AGG | - | Chr6:85781240-85781259 | MsG0680034328.01.T01:CDS | 30.0% |
| !! | AAGCGTTGTCAATTTTCTTT+TGG | + | Chr6:85782870-85782889 | None:intergenic | 30.0% |
| !! | CTCTTACTTCTTTTAAGAAG+GGG | + | Chr6:85781659-85781678 | None:intergenic | 30.0% |
| !! | TGTTTCTGAAGTACGAAAAA+GGG | + | Chr6:85780416-85780435 | None:intergenic | 30.0% |
| !!! | AATCAAGTTGACTTTTTCCA+AGG | + | Chr6:85779846-85779865 | None:intergenic | 30.0% |
| !!! | AGTAGTAGAATGTTGCTTTT+GGG | - | Chr6:85781094-85781113 | MsG0680034328.01.T01:intron | 30.0% |
| !!! | ATCAAGTTGACTTTTTCCAA+GGG | + | Chr6:85779845-85779864 | None:intergenic | 30.0% |
| AAACAGTTTGAGCAGAAAAG+AGG | - | Chr6:85782772-85782791 | MsG0680034328.01.T01:intron | 35.0% | |
| AAAGATTTACAGGCTAACAG+TGG | + | Chr6:85780235-85780254 | None:intergenic | 35.0% | |
| AATCCAAGCTTATATGAGTG+AGG | - | Chr6:85782425-85782444 | MsG0680034328.01.T01:intron | 35.0% | |
| AATGTACCCATCTTCAATCT+TGG | - | Chr6:85781394-85781413 | MsG0680034328.01.T01:intron | 35.0% | |
| ACACACGTAAGAATAGGTAA+CGG | + | Chr6:85782934-85782953 | None:intergenic | 35.0% | |
| ACGACTTCTTACATTGGAAT+GGG | - | Chr6:85782534-85782553 | MsG0680034328.01.T01:intron | 35.0% | |
| AGATGTGTTCAACCAATTCA+AGG | - | Chr6:85780565-85780584 | MsG0680034328.01.T01:intron | 35.0% | |
| AGCCTACATCAAAAGGAATT+TGG | - | Chr6:85780905-85780924 | MsG0680034328.01.T01:intron | 35.0% | |
| AGGAAACTTCAGTGAAACAT+TGG | - | Chr6:85780595-85780614 | MsG0680034328.01.T01:intron | 35.0% | |
| CAACAAAAGACATCTTTGAC+TGG | - | Chr6:85782565-85782584 | MsG0680034328.01.T01:intron | 35.0% | |
| CGCTTGGAAAGATATAAATC+AGG | - | Chr6:85782885-85782904 | MsG0680034328.01.T01:CDS | 35.0% | |
| CGTACTTGGAATGTTATATG+AGG | - | Chr6:85782806-85782825 | MsG0680034328.01.T01:intron | 35.0% | |
| GAACCGAGTTAATAAAACCA+TGG | + | Chr6:85782034-85782053 | None:intergenic | 35.0% | |
| GAACTGAGTTCATATAACCA+TGG | + | Chr6:85782189-85782208 | None:intergenic | 35.0% | |
| GAGCAAGAAATGAAGAAAGA+AGG | - | Chr6:85781615-85781634 | MsG0680034328.01.T01:intron | 35.0% | |
| GATGACACATATGATGCATA+TGG | - | Chr6:85781197-85781216 | MsG0680034328.01.T01:intron | 35.0% | |
| TAAAGCAACTTCGTGTAATC+CGG | + | Chr6:85781564-85781583 | None:intergenic | 35.0% | |
| TACGACTTCTTACATTGGAA+TGG | - | Chr6:85782533-85782552 | MsG0680034328.01.T01:intron | 35.0% | |
| TAGCAACCAAGATTGAAGAT+GGG | + | Chr6:85781403-85781422 | None:intergenic | 35.0% | |
| TAGGTGGGATATTAATTGCT+TGG | - | Chr6:85781530-85781549 | MsG0680034328.01.T01:intron | 35.0% | |
| TGGTTATCAAAGGGAAGTTT+AGG | - | Chr6:85781794-85781813 | MsG0680034328.01.T01:CDS | 35.0% | |
| TTAGCAACCAAGATTGAAGA+TGG | + | Chr6:85781404-85781423 | None:intergenic | 35.0% | |
| TTCCTTGCTTGAGAATATTG+GGG | + | Chr6:85781140-85781159 | None:intergenic | 35.0% | |
| TTGAGAACACACGTAAGAAT+AGG | + | Chr6:85782940-85782959 | None:intergenic | 35.0% | |
| TTTACTTGTGTTGCAAGAGA+AGG | + | Chr6:85780749-85780768 | None:intergenic | 35.0% | |
| ! | AAAAATATTGGAAGAGGCGT+TGG | - | Chr6:85780679-85780698 | MsG0680034328.01.T01:intron | 35.0% |
| ! | ATTCCTTTTGATGTAGGCTT+TGG | + | Chr6:85780904-85780923 | None:intergenic | 35.0% |
| ! | CTAGTCATCAAGTTTAGAGT+TGG | - | Chr6:85781350-85781369 | MsG0680034328.01.T01:intron | 35.0% |
| ! | GATTGACTCAATATGTCGTT+TGG | - | Chr6:85779862-85779881 | MsG0680034328.01.T01:CDS | 35.0% |
| ! | GCAGCAGCATTAACAATTTT+TGG | + | Chr6:85782603-85782622 | None:intergenic | 35.0% |
| ! | TCTACTTGCATTGGCAAAAT+TGG | - | Chr6:85780865-85780884 | MsG0680034328.01.T01:intron | 35.0% |
| ! | TTTTCTTGGCCAAGTCATTA+TGG | + | Chr6:85781922-85781941 | None:intergenic | 35.0% |
| !! | ATTCTCTTGCTGTGCTATTT+AGG | - | Chr6:85779984-85780003 | MsG0680034328.01.T01:CDS | 35.0% |
| !! | CTTTATATATAGGTGGTGGA+AGG | - | Chr6:85781031-85781050 | MsG0680034328.01.T01:intron | 35.0% |
| !! | GTGTTTCTGAAGTACGAAAA+AGG | + | Chr6:85780417-85780436 | None:intergenic | 35.0% |
| !! | TTCTCTTGCTGTGCTATTTA+GGG | - | Chr6:85779985-85780004 | MsG0680034328.01.T01:CDS | 35.0% |
| !! | TTCTTTTAAGAAGGGGTCAA+GGG | + | Chr6:85781652-85781671 | None:intergenic | 35.0% |
| !!! | GAGTAGTAGAATGTTGCTTT+TGG | - | Chr6:85781093-85781112 | MsG0680034328.01.T01:intron | 35.0% |
| AACATTGGTCAGAGATGTTG+AGG | - | Chr6:85780610-85780629 | MsG0680034328.01.T01:intron | 40.0% | |
| ACATTGGTCAGAGATGTTGA+GGG | - | Chr6:85780611-85780630 | MsG0680034328.01.T01:intron | 40.0% | |
| ACCATGAACCATCATATGTG+AGG | + | Chr6:85780657-85780676 | None:intergenic | 40.0% | |
| ACTACTCTATCTCGTGCATA+CGG | + | Chr6:85781080-85781099 | None:intergenic | 40.0% | |
| AGGACATGTTTCTTCGTACT+TGG | - | Chr6:85782792-85782811 | MsG0680034328.01.T01:intron | 40.0% | |
| ATAGCACAGCAAGAGAATGA+AGG | + | Chr6:85779982-85780001 | None:intergenic | 40.0% | |
| ATAGTTAGCATTCAGCCATC+TGG | + | Chr6:85782451-85782470 | None:intergenic | 40.0% | |
| CTCAAAAACAGAGAAACCCT+TGG | - | Chr6:85779826-85779845 | MsG0680034328.01.T01:CDS | 40.0% | |
| GATAACTACACACACTCTGA+CGG | - | Chr6:85782997-85783016 | MsG0680034328.01.T01:CDS | 40.0% | |
| GGATGAATCTTGCTCATAGA+TGG | + | Chr6:85780834-85780853 | None:intergenic | 40.0% | |
| GTATGAAGCCTCACATATGA+TGG | - | Chr6:85780646-85780665 | MsG0680034328.01.T01:intron | 40.0% | |
| GTGGGATATTAATTGCTTGG+AGG | - | Chr6:85781533-85781552 | MsG0680034328.01.T01:intron | 40.0% | |
| TAATTGCTTGGAGGATCTTC+CGG | - | Chr6:85781542-85781561 | MsG0680034328.01.T01:intron | 40.0% | |
| TGCTATACATTGCAGGCTTA+GGG | - | Chr6:85782620-85782639 | MsG0680034328.01.T01:intron | 40.0% | |
| TTGCAAGAGAAGGACTCAAT+CGG | + | Chr6:85780739-85780758 | None:intergenic | 40.0% | |
| TTGGCTACGACTTCTTACAT+TGG | - | Chr6:85782528-85782547 | MsG0680034328.01.T01:intron | 40.0% | |
| !! | AGGAGTGTCTTTCGTTTGAT+CGG | - | Chr6:85780315-85780334 | MsG0680034328.01.T01:CDS | 40.0% |
| !! | ATAGGTAACGGAACTTCAGT+TGG | + | Chr6:85782922-85782941 | None:intergenic | 40.0% |
| !! | CAATCTCTCGCGTTTTATTG+AGG | - | Chr6:85782957-85782976 | MsG0680034328.01.T01:CDS | 40.0% |
| !! | CTTCTTTTAAGAAGGGGTCA+AGG | + | Chr6:85781653-85781672 | None:intergenic | 40.0% |
| AACCAATTCAAGGACGAGCA+AGG | - | Chr6:85780575-85780594 | MsG0680034328.01.T01:intron | 45.0% | |
| AAGAAGTCGTAGCCAACACT+GGG | + | Chr6:85782524-85782543 | None:intergenic | 45.0% | |
| AGCCCCAATATTCTCAAGCA+AGG | - | Chr6:85781135-85781154 | MsG0680034328.01.T01:intron | 45.0% | |
| ATCAAGTGGTTACCCAGTGT+TGG | - | Chr6:85782509-85782528 | MsG0680034328.01.T01:intron | 45.0% | |
| ATGCTGCTGCTATACATTGC+AGG | - | Chr6:85782613-85782632 | MsG0680034328.01.T01:intron | 45.0% | |
| CAAAAACTTGCCTAGGCTAG+TGG | - | Chr6:85780793-85780812 | MsG0680034328.01.T01:intron | 45.0% | |
| CATGGACTTTACGTTTCACC+TGG | - | Chr6:85780019-85780038 | MsG0680034328.01.T01:CDS | 45.0% | |
| CTGCTATACATTGCAGGCTT+AGG | - | Chr6:85782619-85782638 | MsG0680034328.01.T01:intron | 45.0% | |
| CTTATATGAGTGAGGCCAGA+TGG | - | Chr6:85782433-85782452 | MsG0680034328.01.T01:intron | 45.0% | |
| GCCTCACATATGATGGTTCA+TGG | - | Chr6:85780653-85780672 | MsG0680034328.01.T01:intron | 45.0% | |
| GCTCCAAAGCCTACATCAAA+AGG | - | Chr6:85780898-85780917 | MsG0680034328.01.T01:intron | 45.0% | |
| GGATGAAATTGTGTCAAGCG+AGG | - | Chr6:85782641-85782660 | MsG0680034328.01.T01:intron | 45.0% | |
| TAAGAAGTCGTAGCCAACAC+TGG | + | Chr6:85782525-85782544 | None:intergenic | 45.0% | |
| TGCAAGAGAAGGACTCAATC+GGG | + | Chr6:85780738-85780757 | None:intergenic | 45.0% | |
| TGCATGTACTCCTCTGTTGT+TGG | + | Chr6:85782477-85782496 | None:intergenic | 45.0% | |
| TGGCCTCACTCATATAAGCT+TGG | + | Chr6:85782431-85782450 | None:intergenic | 45.0% | |
| TTCCTTGCTCGTCCTTGAAT+TGG | + | Chr6:85780580-85780599 | None:intergenic | 45.0% | |
| ! | TAACTTCTTGCCACTAGCCT+AGG | + | Chr6:85780806-85780825 | None:intergenic | 45.0% |
| !! | ATATAGGTGGTGGAAGGAGT+TGG | - | Chr6:85781037-85781056 | MsG0680034328.01.T01:intron | 45.0% |
| !! | CTGTGCTATTTAGGGTGTTG+AGG | - | Chr6:85779993-85780012 | MsG0680034328.01.T01:CDS | 45.0% |
| !! | TTTAGGGTGTTGAGGCAACA+TGG | - | Chr6:85780001-85780020 | MsG0680034328.01.T01:CDS | 45.0% |
| !!! | AATTTTTTTTTACATAAAAT+AGG | - | Chr6:85780295-85780314 | MsG0680034328.01.T01:CDS | 5.0% |
| AAGAGAAGGACTCAATCGGG+TGG | + | Chr6:85780735-85780754 | None:intergenic | 50.0% | |
| CTCTGCGCAAAAACTTGCCT+AGG | - | Chr6:85780786-85780805 | MsG0680034328.01.T01:intron | 50.0% | |
| TTCTGGTCACCTTCAGTCCA+TGG | - | Chr6:85780709-85780728 | MsG0680034328.01.T01:intron | 50.0% | |
| !!! | GAGGCGTTGGCTTTTACTTC+TGG | - | Chr6:85780692-85780711 | MsG0680034328.01.T01:intron | 50.0% |
| AGGACTCAATCGGGTGGCCA+TGG | + | Chr6:85780729-85780748 | None:intergenic | 60.0% | |
| ! | ATCGGGTGGCCATGGACTGA+AGG | + | Chr6:85780721-85780740 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr6 | gene | 85779818 | 85783071 | 85779818 | ID=MsG0680034328.01;Name=MsG0680034328.01 |
| Chr6 | mRNA | 85779818 | 85783071 | 85779818 | ID=MsG0680034328.01.T01;Parent=MsG0680034328.01;Name=MsG0680034328.01.T01;_AED=0.28;_eAED=0.28;_QI=0|0|0|1|1|1|6|0|498 |
| Chr6 | exon | 85782849 | 85783071 | 85782849 | ID=MsG0680034328.01.T01:exon:13006;Parent=MsG0680034328.01.T01 |
| Chr6 | exon | 85781950 | 85782322 | 85781950 | ID=MsG0680034328.01.T01:exon:13005;Parent=MsG0680034328.01.T01 |
| Chr6 | exon | 85781628 | 85781846 | 85781628 | ID=MsG0680034328.01.T01:exon:13004;Parent=MsG0680034328.01.T01 |
| Chr6 | exon | 85781218 | 85781356 | 85781218 | ID=MsG0680034328.01.T01:exon:13003;Parent=MsG0680034328.01.T01 |
| Chr6 | exon | 85780227 | 85780475 | 85780227 | ID=MsG0680034328.01.T01:exon:13002;Parent=MsG0680034328.01.T01 |
| Chr6 | exon | 85779818 | 85780111 | 85779818 | ID=MsG0680034328.01.T01:exon:13001;Parent=MsG0680034328.01.T01 |
| Chr6 | CDS | 85782849 | 85783071 | 85782849 | ID=MsG0680034328.01.T01:cds;Parent=MsG0680034328.01.T01 |
| Chr6 | CDS | 85781950 | 85782322 | 85781950 | ID=MsG0680034328.01.T01:cds;Parent=MsG0680034328.01.T01 |
| Chr6 | CDS | 85781628 | 85781846 | 85781628 | ID=MsG0680034328.01.T01:cds;Parent=MsG0680034328.01.T01 |
| Chr6 | CDS | 85781218 | 85781356 | 85781218 | ID=MsG0680034328.01.T01:cds;Parent=MsG0680034328.01.T01 |
| Chr6 | CDS | 85780227 | 85780475 | 85780227 | ID=MsG0680034328.01.T01:cds;Parent=MsG0680034328.01.T01 |
| Chr6 | CDS | 85779818 | 85780111 | 85779818 | ID=MsG0680034328.01.T01:cds;Parent=MsG0680034328.01.T01 |
| Gene Sequence |
| Protein sequence |
