AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0680034356.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680034356.01.T01 MTR_5g094550 71.318 129 37 0 1 129 75 203 1.02e-63 202
MsG0680034356.01.T01 MTR_5g094570 71.318 129 37 0 1 129 75 203 9.53e-63 199
MsG0680034356.01.T01 MTR_5g094660 71.318 129 37 0 1 129 75 203 9.54e-62 197
MsG0680034356.01.T01 MTR_5g094540 70.312 128 38 0 1 128 75 202 2.44e-61 196
MsG0680034356.01.T01 MTR_5g094560 67.442 129 42 0 1 129 75 203 7.51e-60 192
MsG0680034356.01.T01 MTR_5g094520 68.992 129 40 0 1 129 1 129 9.31e-60 190
MsG0680034356.01.T01 MTR_4g048580 67.442 129 42 0 1 129 75 203 3.67e-59 190
MsG0680034356.01.T01 MTR_5g094520 68.992 129 40 0 1 129 106 234 9.37e-59 190
MsG0680034356.01.T01 MTR_5g073250 67.442 129 42 0 1 129 75 203 2.46e-58 188
MsG0680034356.01.T01 MTR_5g073320 65.891 129 44 0 1 129 76 204 1.30e-56 183
MsG0680034356.01.T01 MTR_5g094535 62.016 129 32 1 1 129 75 186 3.45e-52 164
MsG0680034356.01.T01 MTR_5g073230 60.465 129 36 2 1 129 78 191 1.95e-46 156
MsG0680034356.01.T01 MTR_2g010530 55.639 133 58 1 1 133 70 201 2.32e-45 154
MsG0680034356.01.T01 MTR_6g039630 52.033 123 59 0 1 123 70 192 6.07e-45 147
MsG0680034356.01.T01 MTR_1g035190 52.800 125 59 0 1 125 56 180 3.69e-44 150
MsG0680034356.01.T01 MTR_5g095290 57.364 129 55 0 1 129 77 205 5.10e-44 150
MsG0680034356.01.T01 MTR_3g058110 53.659 123 57 0 1 123 74 196 1.40e-43 149
MsG0680034356.01.T01 MTR_3g058230 53.125 128 60 0 1 128 1 128 4.01e-43 147
MsG0680034356.01.T01 MTR_6g462640 53.125 128 60 0 1 128 71 198 4.80e-43 148
MsG0680034356.01.T01 MTR_5g094460 55.385 130 29 2 1 129 66 167 6.58e-42 142
MsG0680034356.01.T01 MTR_3g058060 53.125 128 60 0 1 128 74 201 8.43e-42 145
MsG0680034356.01.T01 MTR_5g095260 52.713 129 61 0 1 129 77 205 1.33e-41 144
MsG0680034356.01.T01 MTR_3g058220 50.000 128 64 0 1 128 72 199 1.33e-41 144
MsG0680034356.01.T01 MTR_3g058000 54.472 123 56 0 1 123 74 196 1.43e-41 144
MsG0680034356.01.T01 MTR_1g035140 50.000 128 64 0 1 128 73 200 1.43e-41 144
MsG0680034356.01.T01 MTR_3g058210 52.344 128 61 0 1 128 73 200 2.08e-41 143
MsG0680034356.01.T01 MTR_5g019010 51.562 128 62 0 1 128 72 199 8.10e-41 142
MsG0680034356.01.T01 MTR_3g057970 52.344 128 61 0 1 128 69 196 1.14e-40 141
MsG0680034356.01.T01 MTR_3g058240 48.438 128 66 0 1 128 37 164 1.16e-40 141
MsG0680034356.01.T01 MTR_5g018980 52.800 125 59 0 3 127 74 198 1.77e-40 141
MsG0680034356.01.T01 MTR_8g466180 51.220 123 60 0 1 123 70 192 2.02e-40 141
MsG0680034356.01.T01 MTR_0554s0020 47.656 128 67 0 1 128 73 200 3.20e-40 140
MsG0680034356.01.T01 MTR_3g057900 52.344 128 61 0 1 128 72 199 3.37e-40 140
MsG0680034356.01.T01 MTR_3g058400 51.562 128 62 0 1 128 73 200 3.77e-40 140
MsG0680034356.01.T01 MTR_1g442730 49.219 128 65 0 1 128 70 197 6.68e-40 139
MsG0680034356.01.T01 MTR_3g058250 50.000 128 64 0 1 128 71 198 8.39e-40 139
MsG0680034356.01.T01 MTR_3g057980 51.562 128 62 0 1 128 72 199 1.18e-39 139
MsG0680034356.01.T01 MTR_3g057910 48.062 129 67 0 1 129 73 201 2.95e-39 137
MsG0680034356.01.T01 MTR_5g094840 51.562 128 62 0 1 128 80 207 5.56e-39 137
MsG0680034356.01.T01 MTR_4g133750 50.394 127 63 0 1 127 75 201 1.07e-38 136
MsG0680034356.01.T01 MTR_6g035115 47.287 129 68 0 1 129 73 201 2.17e-38 135
MsG0680034356.01.T01 MTR_0059s0170 45.312 128 70 0 1 128 73 200 4.52e-38 134
MsG0680034356.01.T01 MTR_3g058390 50.394 127 63 0 1 127 71 197 6.82e-38 134
MsG0680034356.01.T01 MTR_5g018990 48.438 128 66 0 1 128 73 200 8.72e-38 134
MsG0680034356.01.T01 MTR_3g057860 47.934 121 63 0 1 121 72 192 5.27e-37 132
MsG0680034356.01.T01 MTR_3g057800 47.154 123 65 0 1 123 71 193 9.65e-37 131
MsG0680034356.01.T01 MTR_3g058380 50.442 113 56 0 11 123 2 114 1.62e-35 126
MsG0680034356.01.T01 MTR_5g073240 72.000 75 21 0 1 75 119 193 1.71e-35 121
MsG0680034356.01.T01 MTR_1g023700 45.600 125 66 1 1 123 69 193 9.57e-35 125
MsG0680034356.01.T01 MTR_1g023730 45.161 124 66 1 1 122 68 191 4.64e-34 124
MsG0680034356.01.T01 MTR_6g034965 46.512 129 68 1 1 128 73 201 5.98e-34 123
MsG0680034356.01.T01 MTR_1g023720 43.548 124 68 1 1 122 68 191 3.01e-33 121
MsG0680034356.01.T01 MTR_6g035100 48.438 128 65 1 1 127 73 200 7.04e-33 120
MsG0680034356.01.T01 MTR_3g076530 44.167 120 67 0 3 122 77 196 3.68e-32 119
MsG0680034356.01.T01 MTR_5g095220 47.287 129 53 1 1 129 64 177 5.78e-32 117
MsG0680034356.01.T01 MTR_0022s0290 47.244 127 63 1 1 123 76 202 1.57e-30 114
MsG0680034356.01.T01 MTR_4g104540 46.457 127 63 2 1 123 1 126 1.92e-30 113
MsG0680034356.01.T01 MTR_8g091690 39.837 123 74 0 1 123 63 185 5.26e-30 112
MsG0680034356.01.T01 MTR_2g065360 42.400 125 70 1 1 123 42 166 1.41e-29 111
MsG0680034356.01.T01 MTR_4g025950 42.742 124 69 1 1 122 65 188 2.96e-29 108
MsG0680034356.01.T01 MTR_4g089030 42.188 128 71 1 1 125 83 210 4.20e-29 110
MsG0680034356.01.T01 MTR_5g070850 41.129 124 71 1 1 122 72 195 4.89e-29 110
MsG0680034356.01.T01 MTR_4g104550 43.200 125 69 1 1 123 63 187 1.23e-28 108
MsG0680034356.01.T01 MTR_4g104610 43.200 125 69 1 1 123 63 187 1.77e-28 108
MsG0680034356.01.T01 MTR_4g089020 43.089 123 69 1 1 123 65 186 1.77e-28 108
MsG0680034356.01.T01 MTR_4g089055 42.520 127 72 1 1 127 87 212 1.99e-28 108
MsG0680034356.01.T01 MTR_4g025980 43.200 125 69 1 1 123 66 190 2.26e-28 108
MsG0680034356.01.T01 MTR_5g094670 53.333 105 30 2 1 105 75 160 2.69e-28 104
MsG0680034356.01.T01 MTR_4g025970 43.548 124 68 1 1 122 65 188 2.75e-28 108
MsG0680034356.01.T01 MTR_4g104660 43.200 125 69 1 1 123 81 205 5.23e-28 107
MsG0680034356.01.T01 MTR_5g094790 46.729 107 43 2 23 129 1 93 7.76e-28 102
MsG0680034356.01.T01 MTR_5g045770 41.085 129 74 1 1 127 65 193 9.09e-28 106
MsG0680034356.01.T01 MTR_3g076560 42.857 126 67 2 3 123 88 213 1.28e-27 106
MsG0680034356.01.T01 MTR_5g470730 37.778 135 81 2 1 133 72 205 5.74e-27 103
MsG0680034356.01.T01 MTR_4g071710 38.760 129 78 1 3 131 74 201 5.92e-27 104
MsG0680034356.01.T01 MTR_8g104080 39.024 123 73 1 1 121 71 193 7.76e-27 101
MsG0680034356.01.T01 MTR_4g089025 40.476 126 74 1 1 125 87 212 9.79e-27 103
MsG0680034356.01.T01 MTR_3g076550 46.364 110 56 1 17 123 87 196 1.11e-26 103
MsG0680034356.01.T01 MTR_4g104640 42.520 127 69 2 1 123 83 209 1.73e-26 103
MsG0680034356.01.T01 MTR_4g026050 42.742 124 69 1 1 122 65 188 3.44e-26 102
MsG0680034356.01.T01 MTR_4g026200 44.355 124 67 1 1 122 65 188 4.83e-26 101
MsG0680034356.01.T01 MTR_5g070710 37.037 135 82 2 1 133 71 204 6.55e-26 101
MsG0680034356.01.T01 MTR_5g072980 38.931 131 78 1 1 129 69 199 1.25e-25 100
MsG0680034356.01.T01 MTR_5g072930 38.931 131 78 1 1 129 69 199 1.25e-25 100
MsG0680034356.01.T01 MTR_8g020950 35.772 123 79 0 1 123 73 195 1.57e-25 100
MsG0680034356.01.T01 MTR_4g471620 43.564 101 56 1 3 103 74 173 3.20e-25 95.1
MsG0680034356.01.T01 MTR_6g084770 37.097 124 76 1 1 122 72 195 3.39e-25 99.4
MsG0680034356.01.T01 MTR_3g077460 40.157 127 60 1 1 127 42 152 4.24e-25 98.6
MsG0680034356.01.T01 MTR_5g073020 39.370 127 75 1 3 127 71 197 4.91e-25 99.0
MsG0680034356.01.T01 MTR_5g023680 42.636 129 72 1 1 127 41 169 1.17e-24 97.8
MsG0680034356.01.T01 MTR_8g020940 34.959 123 80 0 1 123 71 193 1.83e-24 97.4
MsG0680034356.01.T01 MTR_4g026070 43.548 124 68 1 1 122 65 188 2.68e-24 95.1
MsG0680034356.01.T01 MTR_7g012330 39.535 129 76 1 1 127 70 198 5.70e-24 95.9
MsG0680034356.01.T01 MTR_8g076290 34.921 126 81 1 3 128 72 196 5.99e-24 95.9
MsG0680034356.01.T01 MTR_5g021390 34.127 126 82 1 3 128 81 205 6.13e-24 95.9
MsG0680034356.01.T01 MTR_0171s0010 36.508 126 74 3 1 122 72 195 9.00e-24 95.5
MsG0680034356.01.T01 MTR_5g070690 45.161 93 51 0 1 93 70 162 1.14e-23 95.1
MsG0680034356.01.T01 MTR_5g070800 45.161 93 51 0 1 93 70 162 1.14e-23 95.1
MsG0680034356.01.T01 MTR_5g070700 44.792 96 53 0 1 96 72 167 2.10e-23 94.4
MsG0680034356.01.T01 MTR_5g070980 43.750 96 54 0 1 96 72 167 2.56e-23 90.9
MsG0680034356.01.T01 MTR_4g109470 37.398 123 77 0 1 123 66 188 2.76e-23 94.4
MsG0680034356.01.T01 MTR_5g070920 43.750 96 54 0 1 96 72 167 3.36e-23 94.0
MsG0680034356.01.T01 MTR_1g107305 35.036 137 80 3 1 129 73 208 1.51e-22 91.3
MsG0680034356.01.T01 MTR_3g025260 38.400 125 75 1 1 123 67 191 1.79e-22 92.0
MsG0680034356.01.T01 MTR_7g012860 40.310 129 75 1 1 127 69 197 3.72e-22 90.9
MsG0680034356.01.T01 MTR_0287s0060 40.310 129 75 1 1 127 69 197 3.72e-22 90.9
MsG0680034356.01.T01 MTR_4g133760 38.983 118 59 1 1 118 1 105 9.35e-22 89.4
MsG0680034356.01.T01 MTR_1g107295 35.036 137 80 3 1 129 73 208 1.13e-21 89.7
MsG0680034356.01.T01 MTR_8g012585 34.815 135 83 2 1 130 9 143 2.15e-21 88.6
MsG0680034356.01.T01 MTR_4g062500 34.959 123 76 2 1 120 70 191 2.31e-21 89.0
MsG0680034356.01.T01 MTR_5g016410 38.095 126 75 1 1 123 67 192 3.50e-21 88.2
MsG0680034356.01.T01 MTR_4g094775 37.302 126 76 1 1 123 67 192 3.60e-21 88.2
MsG0680034356.01.T01 MTR_7g056103 35.714 126 79 1 1 124 69 194 3.81e-21 88.2
MsG0680034356.01.T01 MTR_4g062510 31.618 136 86 2 1 129 72 207 4.13e-21 88.2
MsG0680034356.01.T01 MTR_4g102310 34.454 119 78 0 3 121 76 194 4.88e-21 87.8
MsG0680034356.01.T01 MTR_3g020780 33.333 123 80 1 3 123 72 194 9.09e-21 87.0
MsG0680034356.01.T01 MTR_3g024520 37.600 125 76 1 1 123 67 191 1.50e-20 86.7
MsG0680034356.01.T01 MTR_2g437880 36.719 128 75 2 2 123 68 195 1.97e-20 86.3
MsG0680034356.01.T01 MTR_3g025230 37.600 125 76 1 1 123 67 191 3.02e-20 85.5
MsG0680034356.01.T01 MTR_3g057990 37.398 123 39 1 1 123 54 138 5.01e-20 82.0
MsG0680034356.01.T01 MTR_6g008530 36.567 134 74 2 1 123 78 211 6.09e-20 84.7
MsG0680034356.01.T01 MTR_7g087520 35.484 124 76 2 3 123 74 196 7.17e-20 84.7
MsG0680034356.01.T01 MTR_4g018800 35.821 134 75 2 1 123 76 209 1.84e-19 83.6
MsG0680034356.01.T01 MTR_4g077210 38.889 126 72 3 3 123 72 197 2.19e-19 83.2
MsG0680034356.01.T01 MTR_5g016440 34.127 126 80 1 1 123 66 191 3.25e-19 82.8
MsG0680034356.01.T01 MTR_8g468780 30.645 124 84 1 1 122 1 124 3.76e-19 82.4
MsG0680034356.01.T01 MTR_6g008600 35.821 134 75 2 1 123 77 210 6.03e-19 82.0
MsG0680034356.01.T01 MTR_7g092620 33.058 121 75 2 1 117 69 187 1.41e-18 80.9
MsG0680034356.01.T01 MTR_5g018480 34.109 129 77 1 2 122 78 206 2.80e-18 79.0
MsG0680034356.01.T01 MTR_1g111240 31.746 126 79 2 3 123 103 226 4.38e-18 79.3
MsG0680034356.01.T01 MTR_0171s0020 31.200 125 82 2 1 122 72 195 6.68e-18 79.0
MsG0680034356.01.T01 MTR_4g088425 30.081 123 86 0 1 123 76 198 7.28e-18 79.0
MsG0680034356.01.T01 MTR_4g102280 31.933 119 81 0 3 121 81 199 8.13e-18 78.6
MsG0680034356.01.T01 MTR_8g020960 32.520 123 83 0 1 123 72 194 8.78e-18 78.6
MsG0680034356.01.T01 MTR_2g450040 33.835 133 82 3 1 127 76 208 1.19e-17 78.2
MsG0680034356.01.T01 MTR_3g436390 37.500 96 60 0 1 96 71 166 1.79e-17 77.8
MsG0680034356.01.T01 MTR_5g075450 29.457 129 88 2 3 128 71 199 2.94e-17 77.0
MsG0680034356.01.T01 MTR_0171s0030 33.645 107 69 1 18 122 1 107 3.95e-17 76.6
MsG0680034356.01.T01 MTR_6g008500 32.639 144 75 2 2 123 75 218 1.28e-16 75.1
MsG0680034356.01.T01 MTR_7g027960 29.839 124 84 2 1 122 67 189 1.45e-16 75.1
MsG0680034356.01.T01 MTR_7g028020 29.839 124 84 2 1 122 67 189 1.48e-16 75.1
MsG0680034356.01.T01 MTR_6g008620 31.343 134 81 1 1 123 78 211 1.79e-16 74.7
MsG0680034356.01.T01 MTR_0181s0030 31.200 125 82 2 1 122 69 192 2.61e-16 74.3
MsG0680034356.01.T01 MTR_4g094772 32.520 123 80 1 2 121 70 192 2.88e-16 74.3
MsG0680034356.01.T01 MTR_4g062530 26.718 131 93 2 1 129 70 199 5.16e-16 73.6
MsG0680034356.01.T01 MTR_4g035330 32.520 123 80 2 2 121 67 189 5.46e-16 73.6
MsG0680034356.01.T01 MTR_8g036185 31.746 126 83 2 1 123 69 194 1.10e-15 72.4
MsG0680034356.01.T01 MTR_8g469300 28.226 124 87 1 1 122 70 193 1.15e-15 72.4
MsG0680034356.01.T01 MTR_7g092600 31.707 123 82 1 1 121 74 196 1.26e-15 72.4
MsG0680034356.01.T01 MTR_0155s0010 38.272 81 50 0 3 83 54 134 1.33e-15 68.9
MsG0680034356.01.T01 MTR_4g088400 29.545 132 83 1 2 123 84 215 2.97e-15 71.2
MsG0680034356.01.T01 MTR_6g008640 31.818 132 81 1 1 123 76 207 3.61e-15 71.2
MsG0680034356.01.T01 MTR_3g436540 34.737 95 62 0 1 95 75 169 4.40e-15 70.9
MsG0680034356.01.T01 MTR_4g088415 28.244 131 84 1 2 122 82 212 5.12e-15 70.5
MsG0680034356.01.T01 MTR_4g095050 34.615 130 78 2 1 123 66 195 9.34e-15 70.1
MsG0680034356.01.T01 MTR_6g042610 28.369 141 93 1 1 133 71 211 1.10e-14 69.7
MsG0680034356.01.T01 MTR_8g012590 36.957 92 58 0 3 94 77 168 1.21e-14 69.7
MsG0680034356.01.T01 MTR_1g031700 29.661 118 81 1 1 116 69 186 2.92e-14 68.6
MsG0680034356.01.T01 MTR_2g437840 30.597 134 89 1 1 130 66 199 3.22e-14 68.6
MsG0680034356.01.T01 MTR_6g084760 33.735 83 53 1 42 122 1 83 3.59e-14 64.3
MsG0680034356.01.T01 MTR_5g007550 33.684 95 63 0 1 95 77 171 4.10e-14 68.2
MsG0680034356.01.T01 MTR_0608s0010 29.661 118 81 1 1 116 69 186 8.58e-14 67.0
MsG0680034356.01.T01 MTR_5g007450 33.684 95 63 0 1 95 77 171 9.33e-14 67.0
MsG0680034356.01.T01 MTR_6g084910 36.250 80 49 1 44 121 3 82 1.36e-13 63.2
MsG0680034356.01.T01 MTR_8g046210 35.238 105 61 3 1 100 76 178 1.58e-13 66.2
MsG0680034356.01.T01 MTR_5g007460 34.545 110 67 1 1 110 44 148 1.84e-13 66.2
MsG0680034356.01.T01 MTR_1g103670 28.814 118 82 1 1 116 69 186 2.32e-13 65.9
MsG0680034356.01.T01 MTR_8g046240 35.238 105 61 3 1 100 76 178 2.74e-13 65.9
MsG0680034356.01.T01 MTR_2g073480 27.500 120 85 1 1 118 1 120 4.44e-13 65.1
MsG0680034356.01.T01 MTR_2g073440 27.500 120 85 1 1 118 68 187 6.14e-13 64.7
MsG0680034356.01.T01 MTR_6g042540 28.467 137 90 1 1 129 71 207 8.14e-13 64.3
MsG0680034356.01.T01 MTR_1g103680 28.814 118 82 1 1 116 70 187 1.01e-12 63.9
MsG0680034356.01.T01 MTR_6g008430 29.231 130 83 2 2 123 77 205 1.87e-12 63.2
MsG0680034356.01.T01 MTR_3g465300 35.955 89 57 0 2 90 86 174 2.21e-12 63.2
MsG0680034356.01.T01 MTR_2g073420 31.250 96 66 0 1 96 79 174 3.32e-12 62.8
MsG0680034356.01.T01 MTR_6g008650 30.303 132 83 2 1 123 76 207 3.77e-12 62.4
MsG0680034356.01.T01 MTR_4g078110 40.230 87 52 0 1 87 63 149 1.02e-11 61.2
MsG0680034356.01.T01 MTR_6g022450 28.800 125 85 2 3 123 77 201 1.08e-11 61.2
MsG0680034356.01.T01 MTR_1g055325 30.208 96 67 0 1 96 89 184 1.08e-11 61.2
MsG0680034356.01.T01 MTR_3g058150 48.214 56 29 0 1 56 1 56 1.39e-11 56.2
MsG0680034356.01.T01 MTR_5g070830 49.091 55 28 0 42 96 223 277 1.98e-11 60.5
MsG0680034356.01.T01 MTR_3g467290 31.034 116 73 2 2 112 89 202 2.77e-11 60.1
MsG0680034356.01.T01 MTR_7g075540 30.526 95 66 0 1 95 69 163 4.10e-11 59.3
MsG0680034356.01.T01 MTR_3g467200 29.808 104 71 1 2 103 89 192 5.98e-11 58.9
MsG0680034356.01.T01 MTR_8g091680 29.600 125 67 2 1 123 63 168 6.11e-11 58.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680034356.01.T01 AT3G26320 47.154 123 63 1 1 121 66 188 2.80e-33 121
MsG0680034356.01.T01 AT3G48320 42.276 123 71 0 1 123 67 189 2.83e-31 116
MsG0680034356.01.T01 AT3G48290 40.650 123 73 0 1 123 68 190 1.93e-30 114
MsG0680034356.01.T01 AT3G48290 40.650 123 73 0 1 123 68 190 3.06e-30 113
MsG0680034356.01.T01 AT5G57260 43.089 123 68 1 1 121 65 187 1.27e-29 111
MsG0680034356.01.T01 AT3G26330 43.089 123 68 1 1 121 66 188 1.89e-29 111
MsG0680034356.01.T01 AT3G26210 44.186 129 69 2 1 127 66 193 3.38e-29 110
MsG0680034356.01.T01 AT3G48270 39.837 123 74 0 1 123 66 188 6.60e-29 109
MsG0680034356.01.T01 AT3G48280 41.463 123 72 0 1 123 65 187 7.27e-29 109
MsG0680034356.01.T01 AT3G26300 45.455 121 64 1 1 119 66 186 2.13e-28 108
MsG0680034356.01.T01 AT3G48310 39.837 123 74 0 1 123 67 189 2.13e-28 108
MsG0680034356.01.T01 AT3G26310 41.463 123 70 1 1 121 65 187 1.09e-27 106
MsG0680034356.01.T01 AT3G26190 41.085 129 73 2 1 127 63 190 1.31e-27 106
MsG0680034356.01.T01 AT3G26280 41.985 131 71 2 1 126 67 197 2.22e-27 105
MsG0680034356.01.T01 AT3G26280 41.985 131 71 2 1 126 84 214 2.47e-27 105
MsG0680034356.01.T01 AT1G11610 39.200 125 74 1 1 123 68 192 3.67e-27 105
MsG0680034356.01.T01 AT1G11610 39.200 125 74 1 1 123 68 192 4.33e-27 104
MsG0680034356.01.T01 AT3G44250 41.860 129 70 2 3 127 65 192 9.48e-27 103
MsG0680034356.01.T01 AT2G02580 48.361 122 61 1 1 120 66 187 1.07e-26 103
MsG0680034356.01.T01 AT1G13090 41.322 121 69 1 3 121 65 185 2.62e-26 100
MsG0680034356.01.T01 AT1G13110 43.089 123 68 1 1 121 67 189 3.57e-26 102
MsG0680034356.01.T01 AT3G26290 40.650 123 71 1 1 121 79 201 3.93e-26 102
MsG0680034356.01.T01 AT2G30770 36.364 132 82 1 1 130 68 199 4.54e-26 102
MsG0680034356.01.T01 AT3G26290 40.650 123 71 1 1 121 66 188 4.93e-26 102
MsG0680034356.01.T01 AT4G13290 40.945 127 71 1 1 123 68 194 6.74e-26 101
MsG0680034356.01.T01 AT5G24950 35.659 129 81 1 1 127 67 195 7.43e-26 101
MsG0680034356.01.T01 AT4G13310 38.583 127 74 1 1 123 67 193 8.05e-26 100
MsG0680034356.01.T01 AT3G53305 41.085 129 73 2 1 127 1 128 1.20e-25 99.4
MsG0680034356.01.T01 AT3G53280 41.270 126 70 1 1 122 63 188 1.29e-25 100
MsG0680034356.01.T01 AT4G13310 38.583 127 74 1 1 123 67 193 2.23e-25 100
MsG0680034356.01.T01 AT1G13090 41.322 121 69 1 3 121 65 185 2.56e-25 99.8
MsG0680034356.01.T01 AT3G48300 35.772 123 79 0 1 123 64 186 3.25e-25 99.4
MsG0680034356.01.T01 AT3G48300 35.772 123 79 0 1 123 66 188 3.28e-25 99.4
MsG0680034356.01.T01 AT5G35715 38.583 127 76 1 1 125 1 127 4.19e-25 99.0
MsG0680034356.01.T01 AT4G36220 36.975 119 74 1 3 121 77 194 4.37e-25 99.4
MsG0680034356.01.T01 AT5G25130 39.024 123 73 1 1 121 64 186 9.26e-25 98.2
MsG0680034356.01.T01 AT4G22710 40.650 123 71 1 1 121 89 211 1.55e-24 97.8
MsG0680034356.01.T01 AT4G22690 40.650 123 71 1 1 121 120 242 1.58e-24 97.8
MsG0680034356.01.T01 AT4G20240 35.385 130 82 1 1 128 68 197 1.70e-24 97.4
MsG0680034356.01.T01 AT4G20240 35.385 130 82 1 1 128 68 197 2.33e-24 96.7
MsG0680034356.01.T01 AT5G25140 41.803 122 67 3 3 121 66 186 7.19e-24 95.9
MsG0680034356.01.T01 AT3G26200 41.860 129 72 2 1 127 63 190 7.57e-24 95.9
MsG0680034356.01.T01 AT1G13080 43.443 122 67 1 3 122 68 189 1.21e-23 95.1
MsG0680034356.01.T01 AT4G31500 34.677 124 79 1 2 123 66 189 1.54e-23 94.7
MsG0680034356.01.T01 AT5G25180 38.211 123 74 1 1 121 64 186 1.77e-23 94.7
MsG0680034356.01.T01 AT3G26180 39.535 129 75 2 1 127 65 192 2.72e-23 94.4
MsG0680034356.01.T01 AT3G26170 37.984 129 77 2 1 127 65 192 3.21e-23 94.0
MsG0680034356.01.T01 AT3G53300 37.795 127 77 1 1 125 63 189 4.62e-23 93.6
MsG0680034356.01.T01 AT2G40890 34.884 129 78 1 1 123 62 190 5.89e-23 93.2
MsG0680034356.01.T01 AT1G13100 39.370 127 74 2 3 127 62 187 1.40e-22 92.0
MsG0680034356.01.T01 AT5G25120 36.585 123 76 1 1 121 64 186 2.73e-22 91.3
MsG0680034356.01.T01 AT5G24960 35.115 131 81 3 1 128 68 197 3.28e-22 90.5
MsG0680034356.01.T01 AT2G30750 36.364 132 82 1 1 130 68 199 4.70e-22 90.9
MsG0680034356.01.T01 AT5G24960 35.115 131 81 3 1 128 68 197 7.04e-22 90.1
MsG0680034356.01.T01 AT4G37410 36.641 131 80 2 3 130 68 198 7.98e-22 90.1
MsG0680034356.01.T01 AT5G57220 32.836 134 88 2 2 133 66 199 1.06e-21 89.7
MsG0680034356.01.T01 AT3G26270 35.878 131 79 2 1 126 67 197 1.23e-21 89.7
MsG0680034356.01.T01 AT3G53290 42.202 109 61 1 19 125 11 119 1.61e-21 89.0
MsG0680034356.01.T01 AT4G13770 34.400 125 80 1 1 123 66 190 1.65e-21 89.4
MsG0680034356.01.T01 AT5G06900 36.800 125 75 2 1 122 69 192 1.89e-21 89.0
MsG0680034356.01.T01 AT5G67310 37.121 132 77 3 3 128 80 211 1.89e-21 89.0
MsG0680034356.01.T01 AT2G24180 42.276 123 69 1 1 121 71 193 2.36e-21 89.0
MsG0680034356.01.T01 AT4G37400 33.083 133 88 1 2 133 67 199 5.61e-21 87.8
MsG0680034356.01.T01 AT5G36220 32.117 137 89 2 1 133 74 210 1.01e-20 87.0
MsG0680034356.01.T01 AT5G04330 33.884 121 79 1 1 121 67 186 1.38e-20 86.7
MsG0680034356.01.T01 AT5G42590 36.923 130 80 1 1 128 67 196 2.39e-20 85.9
MsG0680034356.01.T01 AT4G37310 36.508 126 76 2 2 123 68 193 3.67e-20 85.5
MsG0680034356.01.T01 AT4G12300 48.810 84 43 0 3 86 79 162 6.71e-20 84.7
MsG0680034356.01.T01 AT3G26160 34.677 124 79 1 1 122 65 188 9.20e-20 84.3
MsG0680034356.01.T01 AT5G07990 36.585 123 78 0 1 123 68 190 1.20e-19 84.0
MsG0680034356.01.T01 AT1G01280 37.398 123 75 2 3 123 69 191 1.27e-19 84.0
MsG0680034356.01.T01 AT3G26830 38.017 121 73 1 3 121 65 185 2.18e-19 83.2
MsG0680034356.01.T01 AT3G25180 32.800 125 82 1 1 123 76 200 3.05e-19 82.4
MsG0680034356.01.T01 AT3G25180 32.800 125 82 1 1 123 76 200 7.35e-19 81.6
MsG0680034356.01.T01 AT3G26150 34.677 124 79 1 1 122 65 188 9.82e-19 81.3
MsG0680034356.01.T01 AT5G44620 35.156 128 81 1 3 128 83 210 1.02e-18 81.3
MsG0680034356.01.T01 AT4G37430 31.915 141 87 2 2 133 64 204 1.20e-18 81.3
MsG0680034356.01.T01 AT4G37320 32.258 124 81 2 3 123 71 194 1.29e-18 80.9
MsG0680034356.01.T01 AT3G26220 35.659 129 78 2 3 126 66 194 1.42e-18 80.9
MsG0680034356.01.T01 AT2G42250 32.353 136 85 2 1 129 76 211 2.18e-18 80.5
MsG0680034356.01.T01 AT2G23190 32.800 125 81 1 2 123 114 238 3.03e-18 80.1
MsG0680034356.01.T01 AT2G23220 31.200 125 83 1 2 123 85 209 3.95e-18 79.7
MsG0680034356.01.T01 AT4G37340 34.400 125 79 1 1 122 68 192 6.41e-18 79.0
MsG0680034356.01.T01 AT1G74550 37.008 127 71 3 1 122 62 184 9.44e-18 78.6
MsG0680034356.01.T01 AT4G37370 31.200 125 83 1 2 123 69 193 2.89e-17 77.0
MsG0680034356.01.T01 AT3G28740 34.400 125 79 2 2 123 78 202 3.37e-17 77.0
MsG0680034356.01.T01 AT4G20235 41.026 78 46 0 13 90 82 159 4.05e-17 76.3
MsG0680034356.01.T01 AT4G12320 32.558 129 85 1 3 129 79 207 6.24e-17 76.3
MsG0680034356.01.T01 AT4G37330 36.957 92 58 0 3 94 71 162 1.60e-16 75.1
MsG0680034356.01.T01 AT4G37360 33.600 125 80 2 1 122 68 192 5.12e-16 73.6
MsG0680034356.01.T01 AT4G12310 36.111 108 67 1 3 108 81 188 7.99e-16 73.2
MsG0680034356.01.T01 AT5G06905 28.125 128 90 1 1 126 66 193 1.74e-15 72.0
MsG0680034356.01.T01 AT4G31970 31.538 130 82 1 1 123 70 199 2.09e-15 72.0
MsG0680034356.01.T01 AT4G31940 30.769 130 83 1 1 123 70 199 1.12e-14 69.7
MsG0680034356.01.T01 AT4G12330 29.839 124 83 2 3 122 83 206 1.41e-14 69.3
MsG0680034356.01.T01 AT2G30490 27.419 124 87 1 3 123 71 194 1.56e-14 69.3
MsG0680034356.01.T01 AT2G45560 39.175 97 58 1 1 96 73 169 2.04e-14 67.8
MsG0680034356.01.T01 AT2G45560 39.175 97 58 1 1 96 73 169 4.79e-14 67.4
MsG0680034356.01.T01 AT3G26230 31.200 125 84 1 1 123 61 185 4.82e-14 67.8
MsG0680034356.01.T01 AT5G10600 30.534 131 88 1 3 130 84 214 5.24e-14 67.8
MsG0680034356.01.T01 AT5G10610 30.400 125 85 1 1 123 68 192 8.05e-14 67.4
MsG0680034356.01.T01 AT2G45560 39.175 97 58 1 1 96 73 169 1.04e-13 67.0
MsG0680034356.01.T01 AT2G25160 32.031 128 78 2 4 123 74 200 1.18e-13 66.6
MsG0680034356.01.T01 AT2G25160 32.031 128 78 2 4 123 74 200 1.40e-13 66.6
MsG0680034356.01.T01 AT2G45570 37.113 97 60 1 1 96 73 169 3.46e-13 65.5
MsG0680034356.01.T01 AT1G74540 29.104 134 79 3 1 123 62 190 5.47e-13 65.1
MsG0680034356.01.T01 AT1G79370 28.676 136 84 4 3 127 80 213 7.50e-12 61.6
MsG0680034356.01.T01 AT2G45580 28.333 120 84 1 1 118 73 192 3.09e-11 59.7
MsG0680034356.01.T01 AT2G45580 28.333 120 84 1 1 118 73 192 3.84e-11 59.7
MsG0680034356.01.T01 AT2G45550 35.052 97 62 1 1 96 73 169 7.41e-11 58.9

Find 22 sgRNAs with CRISPR-Local

Find 21 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGAATCTCTTTGGCCATTTC+AGG 0.243758 6:-86202334 None:intergenic
TTTCAGATATTGATTTAATA+AGG 0.253608 6:-86202552 None:intergenic
TGACACCTCTTCTTCTCTAA+TGG 0.270283 6:-86202527 None:intergenic
GACGTTGCTTTCTCTAAATA+TGG 0.278384 6:+86202430 MsG0680034356.01.T01:CDS
GACACCTCTTCTTCTCTAAT+GGG 0.320923 6:-86202526 None:intergenic
AAGATTATTTCAATGACATA+TGG 0.355933 6:+86202604 MsG0680034356.01.T01:CDS
CCCTTAATGAGTCTAAAATT+AGG 0.384291 6:+86202283 None:intergenic
AATAGTTACTTCACCTGAAA+TGG 0.390630 6:+86202321 MsG0680034356.01.T01:CDS
CAAGTTTCATATCAGCAATA+AGG 0.406610 6:+86202670 MsG0680034356.01.T01:CDS
ATCGTGACACGAGCAACTAT+TGG 0.415060 6:+86202628 MsG0680034356.01.T01:CDS
ATGACATCACCTTTAGTGAT+AGG 0.457532 6:+86202365 MsG0680034356.01.T01:CDS
TCGTGACACGAGCAACTATT+GGG 0.466345 6:+86202629 MsG0680034356.01.T01:CDS
AGATTATTTCAATGACATAT+GGG 0.488791 6:+86202605 MsG0680034356.01.T01:CDS
GGTGAAGTAACTATTACATA+TGG 0.506533 6:-86202313 None:intergenic
AAAGTCTGGCCTATCACTAA+AGG 0.510077 6:-86202374 None:intergenic
ATTAGAGAAGAAGAGGTGTC+AGG 0.523165 6:+86202529 MsG0680034356.01.T01:CDS
CAAGCCCATTAGAGAAGAAG+AGG 0.523888 6:+86202522 MsG0680034356.01.T01:CDS
TACAAAATATTTAGTTACAA+TGG 0.574233 6:+86202403 MsG0680034356.01.T01:CDS
AAATCAATATCTGAAAGTGA+AGG 0.631460 6:+86202559 MsG0680034356.01.T01:CDS
CTAAATATGGAGAACACTGG+AGG 0.638388 6:+86202443 MsG0680034356.01.T01:CDS
AATGAGTCTAAAATTAGGAG+AGG 0.645989 6:+86202288 None:intergenic
TCTCTAAATATGGAGAACAC+TGG 0.653286 6:+86202440 MsG0680034356.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TACAAAATATTTAGTTACAA+TGG + Chr6:86202403-86202422 MsG0680034356.01.T01:CDS 15.0%
!!! TTTCAGATATTGATTTAATA+AGG - Chr6:86202555-86202574 None:intergenic 15.0%
!! AAGATTATTTCAATGACATA+TGG + Chr6:86202604-86202623 MsG0680034356.01.T01:CDS 20.0%
!! AGATTATTTCAATGACATAT+GGG + Chr6:86202605-86202624 MsG0680034356.01.T01:CDS 20.0%
! AAATCAATATCTGAAAGTGA+AGG + Chr6:86202559-86202578 MsG0680034356.01.T01:CDS 25.0%
!! ATTTTGTACATAAGAAAGTC+TGG - Chr6:86202391-86202410 None:intergenic 25.0%
!!! ATTTGTTTTCAGAATCTCTT+TGG - Chr6:86202347-86202366 None:intergenic 25.0%
AATAGTTACTTCACCTGAAA+TGG + Chr6:86202321-86202340 MsG0680034356.01.T01:CDS 30.0%
GGTGAAGTAACTATTACATA+TGG - Chr6:86202316-86202335 None:intergenic 30.0%
ATGACATCACCTTTAGTGAT+AGG + Chr6:86202365-86202384 MsG0680034356.01.T01:CDS 35.0%
TCTCTAAATATGGAGAACAC+TGG + Chr6:86202440-86202459 MsG0680034356.01.T01:CDS 35.0%
! GACGTTGCTTTCTCTAAATA+TGG + Chr6:86202430-86202449 MsG0680034356.01.T01:CDS 35.0%
AAAGTCTGGCCTATCACTAA+AGG - Chr6:86202377-86202396 None:intergenic 40.0%
AGAATCTCTTTGGCCATTTC+AGG - Chr6:86202337-86202356 None:intergenic 40.0%
CTAAATATGGAGAACACTGG+AGG + Chr6:86202443-86202462 MsG0680034356.01.T01:CDS 40.0%
GACACCTCTTCTTCTCTAAT+GGG - Chr6:86202529-86202548 None:intergenic 40.0%
TGACACCTCTTCTTCTCTAA+TGG - Chr6:86202530-86202549 None:intergenic 40.0%
!! ATTAGAGAAGAAGAGGTGTC+AGG + Chr6:86202529-86202548 MsG0680034356.01.T01:CDS 40.0%
ATCGTGACACGAGCAACTAT+TGG + Chr6:86202628-86202647 MsG0680034356.01.T01:CDS 45.0%
CAAGCCCATTAGAGAAGAAG+AGG + Chr6:86202522-86202541 MsG0680034356.01.T01:CDS 45.0%
TCGTGACACGAGCAACTATT+GGG + Chr6:86202629-86202648 MsG0680034356.01.T01:CDS 45.0%
Chromosome Type Strat End Strand Name
Chr6 gene 86202289 86202690 86202289 ID=MsG0680034356.01;Name=MsG0680034356.01
Chr6 mRNA 86202289 86202690 86202289 ID=MsG0680034356.01.T01;Parent=MsG0680034356.01;Name=MsG0680034356.01.T01;_AED=0.42;_eAED=0.42;_QI=0|-1|0|1|-1|1|1|0|133
Chr6 exon 86202289 86202690 86202289 ID=MsG0680034356.01.T01:exon:7244;Parent=MsG0680034356.01.T01
Chr6 CDS 86202289 86202690 86202289 ID=MsG0680034356.01.T01:cds;Parent=MsG0680034356.01.T01
Gene Sequence

>MsG0680034356.01.T01

ATGAGTCTAAAATTAGGAGAGGTACCATATGTAATAGTTACTTCACCTGAAATGGCCAAAGAGATTCTGAAAACAAATGACATCACCTTTAGTGATAGGCCAGACTTTCTTATGTACAAAATATTTAGTTACAATGGTACTGACGTTGCTTTCTCTAAATATGGAGAACACTGGAGGCAATTACGAAAGATATGTGTTTTAGAGTTATTAAGTGCAAAGCGTGTCGAATCATTCAAGCCCATTAGAGAAGAAGAGGTGTCAGGCCTTATTAAATCAATATCTGAAAGTGAAGGATCAGTTGTTAATCTCACTCAGAAGATTATTTCAATGACATATGGGATCGTGACACGAGCAACTATTGGGAAAAAGAACAGACACGAACAAGTTTCATATCAGCAATAA

Protein sequence

>MsG0680034356.01.T01

MSLKLGEVPYVIVTSPEMAKEILKTNDITFSDRPDFLMYKIFSYNGTDVAFSKYGEHWRQLRKICVLELLSAKRVESFKPIREEEVSGLIKSISESEGSVVNLTQKIISMTYGIVTRATIGKKNRHEQVSYQQ*