AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0680034348.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680034348.01.T01 MTR_6g039440 69.087 427 132 0 247 673 127 553 0.0 624
MsG0680034348.01.T01 MTR_6g039440 67.188 192 63 0 32 223 265 456 4.07e-84 275
MsG0680034348.01.T01 MTR_5g062230 68.150 427 136 0 247 673 127 553 0.0 621
MsG0680034348.01.T01 MTR_5g062230 66.146 192 65 0 32 223 265 456 6.33e-84 275
MsG0680034348.01.T01 MTR_4g048460 69.321 427 131 0 247 673 135 561 0.0 612
MsG0680034348.01.T01 MTR_4g048460 65.174 201 66 1 27 223 264 464 1.94e-79 263
MsG0680034348.01.T01 MTR_6g008560 66.745 427 142 0 247 673 131 557 0.0 610
MsG0680034348.01.T01 MTR_6g008560 63.077 195 72 0 32 226 269 463 2.35e-81 268
MsG0680034348.01.T01 MTR_5g094620 66.511 427 143 0 247 673 111 537 0.0 604
MsG0680034348.01.T01 MTR_5g094620 61.979 192 73 0 32 223 249 440 1.25e-80 266
MsG0680034348.01.T01 MTR_3g464190 65.574 427 147 0 247 673 131 557 0.0 595
MsG0680034348.01.T01 MTR_3g464190 61.979 192 73 0 32 223 269 460 1.19e-81 269
MsG0680034348.01.T01 MTR_5g073260 64.637 427 151 0 247 673 126 552 0.0 581
MsG0680034348.01.T01 MTR_5g073260 60.938 192 75 0 32 223 264 455 1.93e-74 250
MsG0680034348.01.T01 MTR_5g073200 65.647 425 146 0 247 671 123 547 0.0 579
MsG0680034348.01.T01 MTR_5g073200 61.979 192 73 0 32 223 261 452 9.10e-73 245
MsG0680034348.01.T01 MTR_6g008560 65.835 401 137 0 273 673 1 401 0.0 567
MsG0680034348.01.T01 MTR_6g008560 62.755 196 73 0 32 227 113 308 3.07e-83 268
MsG0680034348.01.T01 MTR_4g081460 59.765 425 171 0 249 673 138 562 0.0 541
MsG0680034348.01.T01 MTR_4g081460 57.292 192 82 0 32 223 274 465 4.51e-73 246
MsG0680034348.01.T01 MTR_4g048460 69.394 330 101 0 247 576 135 464 4.30e-159 467
MsG0680034348.01.T01 MTR_4g048460 64.851 202 67 1 27 224 264 465 2.69e-80 263
MsG0680034348.01.T01 MTR_8g007515 44.907 432 231 5 247 673 127 556 1.21e-129 394
MsG0680034348.01.T01 MTR_8g007515 40.526 190 110 2 32 219 267 455 7.36e-44 166
MsG0680034348.01.T01 MTR_2g082010 43.794 427 235 5 250 673 144 568 1.24e-126 387
MsG0680034348.01.T01 MTR_2g082010 40.741 189 110 2 32 219 280 467 2.81e-44 167
MsG0680034348.01.T01 MTR_2g081980 44.393 428 232 6 250 673 132 557 8.61e-125 382
MsG0680034348.01.T01 MTR_2g081980 42.632 190 106 3 32 219 268 456 3.09e-47 176
MsG0680034348.01.T01 MTR_2g082060 42.191 429 230 7 250 673 138 553 1.10e-113 353
MsG0680034348.01.T01 MTR_2g082060 39.683 189 112 2 32 219 276 463 8.73e-45 169
MsG0680034348.01.T01 MTR_2g082050 39.252 428 222 7 247 671 65 457 5.19e-104 325
MsG0680034348.01.T01 MTR_2g082050 35.915 142 89 2 79 219 218 358 9.08e-26 111
MsG0680034348.01.T01 MTR_4g019550 39.588 437 242 6 246 673 135 558 7.89e-104 327
MsG0680034348.01.T01 MTR_4g019550 35.567 194 106 3 32 218 275 456 1.31e-31 130
MsG0680034348.01.T01 MTR_4g045810 34.607 445 289 2 228 671 136 579 7.21e-90 291
MsG0680034348.01.T01 MTR_4g045810 34.536 194 126 1 32 224 292 485 1.25e-33 136
MsG0680034348.01.T01 MTR_2g089130 35.556 405 259 2 250 653 143 546 8.40e-84 275
MsG0680034348.01.T01 MTR_2g089130 33.508 191 127 0 32 222 278 468 6.93e-32 131
MsG0680034348.01.T01 MTR_2g089120 35.802 405 255 5 250 651 143 545 1.16e-80 267
MsG0680034348.01.T01 MTR_2g089120 31.250 192 131 1 32 222 278 469 2.03e-28 120
MsG0680034348.01.T01 MTR_7g057340 65.698 172 59 0 502 673 1 172 6.00e-80 251
MsG0680034348.01.T01 MTR_7g057340 68.000 75 24 0 149 223 1 75 2.19e-27 109
MsG0680034348.01.T01 MTR_2g064425 31.407 519 349 6 156 671 55 569 1.43e-75 253
MsG0680034348.01.T01 MTR_2g064425 35.789 190 118 3 32 219 284 471 2.08e-32 132
MsG0680034348.01.T01 MTR_2g064425 34.499 429 275 5 246 671 159 584 2.34e-75 253
MsG0680034348.01.T01 MTR_2g064425 35.789 190 118 3 32 219 299 486 2.20e-32 133
MsG0680034348.01.T01 MTR_7g057390 63.372 172 60 1 502 673 1 169 2.34e-73 234
MsG0680034348.01.T01 MTR_7g057390 68.000 75 24 0 149 223 1 75 5.65e-28 110
MsG0680034348.01.T01 MTR_5g094530 55.963 218 60 3 283 498 1 184 2.39e-73 235
MsG0680034348.01.T01 MTR_5g094530 43.860 114 30 2 32 145 105 184 1.01e-22 96.7
MsG0680034348.01.T01 MTR_4g092020 33.412 425 276 4 247 667 144 565 4.26e-70 239
MsG0680034348.01.T01 MTR_4g092020 32.642 193 129 1 32 223 281 473 4.73e-24 107
MsG0680034348.01.T01 MTR_2g065450 31.749 463 308 6 214 671 129 588 7.94e-69 236
MsG0680034348.01.T01 MTR_2g065450 34.804 204 131 2 32 234 303 505 5.72e-32 131
MsG0680034348.01.T01 MTR_8g057020 31.250 448 304 4 226 671 142 587 2.34e-68 234
MsG0680034348.01.T01 MTR_8g057020 33.511 188 124 1 32 218 301 488 4.79e-30 125
MsG0680034348.01.T01 MTR_4g092010 28.941 425 290 5 247 665 138 556 1.57e-62 218
MsG0680034348.01.T01 MTR_4g092010 30.964 197 132 1 27 219 265 461 1.11e-28 121
MsG0680034348.01.T01 MTR_7g010710 30.986 426 286 4 250 671 132 553 1.47e-58 207
MsG0680034348.01.T01 MTR_7g010710 33.838 198 130 1 34 230 268 465 3.47e-25 110
MsG0680034348.01.T01 MTR_2g064425 35.294 340 215 4 156 493 55 391 1.72e-57 201
MsG0680034348.01.T01 MTR_2g064425 44.545 110 58 2 32 140 284 391 1.93e-23 103
MsG0680034348.01.T01 MTR_2g064425 42.000 250 141 3 246 493 159 406 4.75e-57 200
MsG0680034348.01.T01 MTR_2g064425 44.545 110 58 2 32 140 299 406 2.54e-23 103
MsG0680034348.01.T01 MTR_7g050990 59.639 166 56 2 316 481 27 181 2.26e-55 204
MsG0680034348.01.T01 MTR_7g050990 48.454 97 39 2 32 128 96 181 1.55e-21 100
MsG0680034348.01.T01 MTR_6g064980 29.385 439 288 9 231 656 74 503 2.16e-54 194
MsG0680034348.01.T01 MTR_6g064980 30.151 199 135 3 45 239 241 439 8.66e-26 112
MsG0680034348.01.T01 MTR_6g065040 29.426 401 262 8 269 656 9 401 2.28e-53 189
MsG0680034348.01.T01 MTR_6g065040 31.667 180 116 2 45 219 139 316 4.58e-26 111
MsG0680034348.01.T01 MTR_3g465090 28.537 410 288 4 247 651 89 498 2.30e-53 192
MsG0680034348.01.T01 MTR_3g465090 29.775 178 122 2 45 219 241 418 3.34e-23 104
MsG0680034348.01.T01 MTR_3g063120 27.273 473 324 10 206 667 25 488 6.61e-53 190
MsG0680034348.01.T01 MTR_3g063120 30.337 178 121 2 45 219 217 394 6.67e-25 109
MsG0680034348.01.T01 MTR_3g063170 28.440 436 290 9 224 646 67 493 6.59e-52 188
MsG0680034348.01.T01 MTR_3g063170 29.444 180 120 2 45 219 241 418 8.10e-23 103
MsG0680034348.01.T01 MTR_3g063140 28.469 418 278 8 247 651 89 498 2.89e-51 186
MsG0680034348.01.T01 MTR_3g063140 28.889 180 121 2 45 219 241 418 3.36e-22 101
MsG0680034348.01.T01 MTR_2g010960 27.155 464 305 9 225 664 64 518 1.20e-50 184
MsG0680034348.01.T01 MTR_2g010960 25.478 157 117 0 34 190 234 390 2.46e-17 85.9
MsG0680034348.01.T01 MTR_3g052120 28.889 405 279 7 269 667 111 512 1.09e-48 179
MsG0680034348.01.T01 MTR_3g052120 30.151 199 135 3 45 239 241 439 1.02e-22 102
MsG0680034348.01.T01 MTR_3g015080 47.093 172 53 2 502 673 1 134 1.16e-43 153
MsG0680034348.01.T01 MTR_3g015080 45.333 75 20 1 149 223 1 54 2.31e-11 62.4
MsG0680034348.01.T01 MTR_2g012870 24.524 420 289 12 272 671 343 754 1.73e-24 109
MsG0680034348.01.T01 MTR_3g058160 23.542 463 301 15 246 671 123 569 4.95e-22 101
MsG0680034348.01.T01 MTR_3g058160 23.427 461 304 14 246 671 314 760 5.11e-22 101
MsG0680034348.01.T01 MTR_3g058160 23.427 461 304 14 246 671 327 773 5.53e-22 101
MsG0680034348.01.T01 MTR_3g058160 23.427 461 304 14 246 671 334 780 5.73e-22 101
MsG0680034348.01.T01 MTR_2g012900 24.022 358 240 10 272 603 348 699 4.57e-21 98.6
MsG0680034348.01.T01 MTR_3g063160 30.097 206 131 5 247 445 89 288 2.06e-20 92.4
MsG0680034348.01.T01 MTR_2g064295 22.030 463 308 15 246 671 314 760 4.98e-20 95.5
MsG0680034348.01.T01 MTR_3g058160 22.822 482 302 15 246 671 334 801 1.53e-19 94.0
MsG0680034348.01.T01 MTR_7g094970 27.619 210 124 5 246 430 271 477 9.34e-14 75.1
MsG0680034348.01.T01 MTR_5g030050 27.039 233 144 7 221 429 27 257 5.00e-13 70.9
MsG0680034348.01.T01 MTR_7g011663 30.622 209 117 5 246 427 409 616 9.94e-13 72.0
MsG0680034348.01.T01 MTR_5g081730 36.364 110 65 1 270 374 2 111 8.46e-12 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680034348.01.T01 AT5G23960 40.741 432 255 1 242 673 115 545 5.19e-117 361
MsG0680034348.01.T01 AT5G23960 37.766 188 117 0 32 219 258 445 4.62e-39 152
MsG0680034348.01.T01 AT5G23960 40.690 435 253 3 242 673 115 547 5.00e-116 358
MsG0680034348.01.T01 AT5G23960 37.696 191 115 2 32 219 258 447 3.94e-38 149
MsG0680034348.01.T01 AT1G70080 38.228 429 259 3 247 669 179 607 8.82e-103 326
MsG0680034348.01.T01 AT1G70080 35.789 190 121 1 32 220 321 510 1.92e-41 160
MsG0680034348.01.T01 AT3G14490 38.551 428 257 3 251 673 175 601 4.38e-98 313
MsG0680034348.01.T01 AT3G14490 32.447 188 126 1 32 219 313 499 2.25e-32 133
MsG0680034348.01.T01 AT1G31950 35.498 462 289 4 217 673 150 607 8.38e-96 308
MsG0680034348.01.T01 AT1G31950 34.694 196 128 0 32 227 318 513 4.89e-36 144
MsG0680034348.01.T01 AT1G31950 35.498 462 289 4 217 673 149 606 9.78e-96 308
MsG0680034348.01.T01 AT1G31950 34.694 196 128 0 32 227 317 512 5.22e-36 144
MsG0680034348.01.T01 AT3G29410 36.620 426 268 2 250 673 73 498 1.09e-93 299
MsG0680034348.01.T01 AT3G29410 33.831 201 130 2 32 229 209 409 1.35e-32 132
MsG0680034348.01.T01 AT3G14520 35.897 429 270 3 250 673 176 604 7.29e-93 300
MsG0680034348.01.T01 AT3G14520 33.673 196 130 0 32 227 315 510 1.25e-36 145
MsG0680034348.01.T01 AT3G14540 36.659 431 264 3 250 673 173 601 7.99e-93 300
MsG0680034348.01.T01 AT3G14540 33.673 196 130 0 32 227 312 507 5.66e-34 138
MsG0680034348.01.T01 AT3G29410 36.620 426 268 2 250 673 178 603 1.68e-92 299
MsG0680034348.01.T01 AT3G29410 34.197 193 126 1 32 223 314 506 4.02e-32 132
MsG0680034348.01.T01 AT5G44630 36.150 426 268 2 250 671 130 555 1.02e-91 296
MsG0680034348.01.T01 AT5G44630 31.915 188 128 0 33 220 270 457 5.61e-33 134
MsG0680034348.01.T01 AT4G20200 36.215 428 267 5 251 673 178 604 6.37e-90 292
MsG0680034348.01.T01 AT4G20200 34.737 190 121 3 33 220 316 504 7.37e-34 137
MsG0680034348.01.T01 AT1G33750 35.011 437 273 4 243 673 172 603 7.51e-90 292
MsG0680034348.01.T01 AT1G33750 32.804 189 127 0 32 220 315 503 2.49e-31 130
MsG0680034348.01.T01 AT4G20210 34.346 428 277 3 250 673 173 600 2.12e-88 288
MsG0680034348.01.T01 AT4G20210 32.275 189 127 1 33 220 312 500 4.89e-34 138
MsG0680034348.01.T01 AT3G32030 33.879 428 279 3 250 673 177 604 1.80e-86 283
MsG0680034348.01.T01 AT3G32030 30.729 192 133 0 32 223 315 506 1.70e-32 133
MsG0680034348.01.T01 AT3G29190 33.333 450 287 6 232 673 157 601 4.30e-86 282
MsG0680034348.01.T01 AT3G29190 33.854 192 118 3 33 219 313 500 2.51e-32 133
MsG0680034348.01.T01 AT4G13300 34.426 427 276 3 251 673 128 554 2.47e-85 279
MsG0680034348.01.T01 AT4G13300 27.547 265 162 3 36 298 269 505 2.27e-28 120
MsG0680034348.01.T01 AT4G13280 34.426 427 276 4 251 673 128 554 3.06e-84 276
MsG0680034348.01.T01 AT4G13280 30.270 185 129 0 36 220 269 453 2.11e-28 120
MsG0680034348.01.T01 AT2G23230 34.505 455 291 6 224 672 146 599 6.27e-84 276
MsG0680034348.01.T01 AT2G23230 35.106 188 121 1 33 219 311 498 6.18e-34 137
MsG0680034348.01.T01 AT4G15870 33.110 447 280 6 232 673 166 598 1.92e-81 270
MsG0680034348.01.T01 AT4G15870 31.606 193 118 2 33 224 322 501 3.45e-30 126
MsG0680034348.01.T01 AT5G48110 37.609 343 209 5 332 673 1 339 4.57e-81 261
MsG0680034348.01.T01 AT5G48110 40.741 189 109 3 32 219 54 240 1.74e-44 162
MsG0680034348.01.T01 AT4G20230 32.957 443 291 5 232 669 160 601 9.93e-81 268
MsG0680034348.01.T01 AT4G20230 32.461 191 128 1 31 220 314 504 5.79e-31 129
MsG0680034348.01.T01 AT3G29110 33.551 459 297 5 217 671 141 595 1.18e-80 268
MsG0680034348.01.T01 AT3G29110 31.844 179 121 1 33 210 309 487 3.43e-26 114
MsG0680034348.01.T01 AT4G20230 32.957 443 291 5 232 669 172 613 1.40e-80 268
MsG0680034348.01.T01 AT4G20230 32.461 191 128 1 31 220 326 516 7.41e-31 128
MsG0680034348.01.T01 AT2G23230 34.066 455 288 7 224 672 146 594 2.45e-80 267
MsG0680034348.01.T01 AT2G23230 34.574 188 117 2 33 219 311 493 9.67e-32 131
MsG0680034348.01.T01 AT1G66020 33.484 442 289 4 232 669 154 594 4.17e-79 263
MsG0680034348.01.T01 AT1G66020 30.159 189 131 1 33 220 310 498 9.63e-26 112
MsG0680034348.01.T01 AT1G31950 36.605 377 230 4 217 588 150 522 4.84e-78 259
MsG0680034348.01.T01 AT1G31950 35.106 188 122 0 32 219 318 505 1.81e-36 144
MsG0680034348.01.T01 AT3G14540 38.576 337 199 2 250 580 173 507 1.09e-75 252
MsG0680034348.01.T01 AT3G14540 33.503 197 131 0 32 228 312 508 4.89e-35 139
MsG0680034348.01.T01 AT1G48800 31.180 449 301 6 227 669 156 602 1.09e-73 249
MsG0680034348.01.T01 AT1G48800 28.421 190 132 3 33 219 317 505 3.08e-23 105
MsG0680034348.01.T01 AT4G16730 30.769 442 289 6 246 673 55 493 3.38e-73 245
MsG0680034348.01.T01 AT4G16730 30.412 194 129 3 32 222 202 392 1.27e-27 117
MsG0680034348.01.T01 AT4G13280 33.255 427 251 6 251 673 128 524 8.90e-73 244
MsG0680034348.01.T01 AT4G13280 27.568 185 104 2 36 220 269 423 1.99e-18 89.7
MsG0680034348.01.T01 AT4G16730 30.769 442 289 6 246 673 101 539 9.85e-73 245
MsG0680034348.01.T01 AT4G16730 30.412 194 129 3 32 222 248 438 1.74e-27 117
MsG0680034348.01.T01 AT1G48820 29.522 481 300 8 208 666 94 557 1.33e-68 234
MsG0680034348.01.T01 AT1G48820 29.101 189 115 3 33 219 291 462 6.08e-24 107
MsG0680034348.01.T01 AT1G61680 31.280 422 285 2 247 663 148 569 2.80e-68 234
MsG0680034348.01.T01 AT1G61680 33.514 185 123 0 35 219 293 477 6.53e-29 122
MsG0680034348.01.T01 AT1G61680 31.235 413 279 2 256 663 150 562 1.48e-66 229
MsG0680034348.01.T01 AT1G61680 33.514 185 123 0 35 219 286 470 6.75e-29 122
MsG0680034348.01.T01 AT4G16740 31.796 412 269 7 269 673 158 564 4.21e-63 219
MsG0680034348.01.T01 AT4G16740 32.524 206 131 5 32 233 279 480 5.94e-27 116
MsG0680034348.01.T01 AT2G24210 30.455 440 289 9 247 673 155 590 2.41e-60 213
MsG0680034348.01.T01 AT2G24210 34.031 191 123 3 34 222 300 489 2.84e-27 117
MsG0680034348.01.T01 AT3G25810 28.606 416 286 5 269 673 182 597 2.74e-56 202
MsG0680034348.01.T01 AT3G25810 32.632 190 127 1 34 222 305 494 2.51e-28 120
MsG0680034348.01.T01 AT3G25830 29.087 416 282 9 269 673 181 594 3.04e-54 196
MsG0680034348.01.T01 AT3G25830 32.642 193 127 3 32 222 301 492 3.78e-26 114
MsG0680034348.01.T01 AT3G25820 29.087 416 282 9 269 673 181 594 3.04e-54 196
MsG0680034348.01.T01 AT3G25820 32.642 193 127 3 32 222 301 492 3.78e-26 114
MsG0680034348.01.T01 AT1G66020 37.218 266 162 4 232 493 154 418 3.49e-51 184
MsG0680034348.01.T01 AT1G66020 33.036 112 74 1 33 143 310 421 9.02e-16 80.5
MsG0680034348.01.T01 AT4G16740 36.087 230 141 2 269 493 158 386 4.48e-44 163
MsG0680034348.01.T01 AT4G16740 36.842 114 71 1 32 145 279 391 7.45e-19 89.7
MsG0680034348.01.T01 AT3G25820 34.286 210 131 4 269 474 181 387 9.21e-37 143
MsG0680034348.01.T01 AT3G25820 36.585 123 76 2 32 153 301 422 6.66e-19 90.5
MsG0680034348.01.T01 AT4G16740 35.870 184 113 1 269 447 158 341 1.03e-33 133
MsG0680034348.01.T01 AT4G16740 35.870 184 113 1 269 447 158 341 1.03e-33 133
MsG0680034348.01.T01 AT3G25820 32.240 183 120 3 269 447 181 363 1.73e-29 121
MsG0680034348.01.T01 AT3G25820 42.857 63 36 0 32 94 301 363 1.14e-11 67.8
MsG0680034348.01.T01 AT3G25820 32.240 183 120 3 269 447 181 363 1.73e-29 121
MsG0680034348.01.T01 AT3G25820 42.857 63 36 0 32 94 301 363 1.14e-11 67.8
MsG0680034348.01.T01 AT1G79460 24.086 465 301 18 237 663 323 773 7.29e-21 98.2
MsG0680034348.01.T01 AT1G79460 27.044 159 111 4 32 186 490 647 7.18e-11 66.2
MsG0680034348.01.T01 AT1G61120 22.049 449 316 10 246 673 349 784 1.61e-16 84.3

Find 108 sgRNAs with CRISPR-Local

Find 404 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTACTTGCATTGGCAAAAT+TGG 0.119753 6:+86067884 MsG0680034348.01.T01:CDS
TTTCCTTGCTTGAGAATATT+GGG 0.241792 6:-86068156 None:intergenic
ATCAAGTTCAACTCAAGTTT+TGG 0.246706 6:+86064444 MsG0680034348.01.T01:CDS
ATGCAAGTAGAATTTCATTA+TGG 0.248221 6:-86067872 None:intergenic
CTGCTATACATTGCAGGCTT+AGG 0.276774 6:+86069627 MsG0680034348.01.T01:CDS
CTGCTATACATTGCAGGCTT+AGG 0.281211 6:+86063191 MsG0680034348.01.T01:CDS
AGCCTGCATCAAAAGGAATT+TGG 0.290423 6:+86067924 MsG0680034348.01.T01:CDS
GTCATCAATGTATGATAAAA+TGG 0.310334 6:-86068198 None:intergenic
CAGATTTCCACCCTAGCGTT+TGG 0.311610 6:+86061765 MsG0680034348.01.T01:CDS
AGATTTCCACCCTAGCGTTT+GGG 0.325288 6:+86061766 MsG0680034348.01.T01:CDS
TGCAAAACCGATTTCTCATT+AGG 0.335406 6:-86061731 None:intergenic
TAATTGCTTGGAGGATCTTC+CGG 0.335446 6:+86062268 MsG0680034348.01.T01:CDS
TAATTGCTTGGAGGATCTTC+CGG 0.335446 6:+86068548 MsG0680034348.01.T01:CDS
TGAGGGAATATGATTTGAAT+AGG 0.340079 6:+86069828 MsG0680034348.01.T01:CDS
TTCCTTGCTCGTCCTTGAAT+TGG 0.345275 6:-86067596 None:intergenic
ATGTTGCTGCTATACATTGC+AGG 0.346024 6:+86063185 MsG0680034348.01.T01:CDS
GAGTAGTAGAATGTTGCTTT+TGG 0.347068 6:+86061819 MsG0680034348.01.T01:CDS
GAGTAGTTGAATGTTGCTTT+TGG 0.353926 6:+86068111 MsG0680034348.01.T01:CDS
ATGCTGCTGCTATACATTGC+AGG 0.354080 6:+86069621 MsG0680034348.01.T01:CDS
AGGAAACTTCAGTGAAATAT+TGG 0.354422 6:+86067614 MsG0680034348.01.T01:CDS
AGGACATGTTTCTTCGTACT+TGG 0.361077 6:+86069796 MsG0680034348.01.T01:CDS
GACATATATTAATGATTTGC+TGG 0.369605 6:+86070033 MsG0680034348.01.T01:CDS
CATCAATCCTAATGAGAAAT+CGG 0.381109 6:+86061724 MsG0680034348.01.T01:CDS
TGCAAGTAGAATTTCATTAT+GGG 0.387262 6:-86067871 None:intergenic
CGTACTTGGAATGTTATATG+AGG 0.388936 6:+86069810 MsG0680034348.01.T01:CDS
GGATGAATCTTGCTCATAGA+TGG 0.390050 6:-86067850 None:intergenic
CGACAAAAGACATCTTTGAT+TGG 0.390521 6:+86063137 MsG0680034348.01.T01:CDS
GTTGCTTTATAAATCACTCT+TGG 0.404999 6:+86062301 MsG0680034348.01.T01:CDS
GTTGCTTTATAAATCACTCT+TGG 0.404999 6:+86068581 MsG0680034348.01.T01:CDS
TGCTATACATTGCAGGCTTA+GGG 0.417901 6:+86063192 MsG0680034348.01.T01:CDS
TGCATGTACTCCTCTGTTGT+TGG 0.418606 6:-86063046 None:intergenic
TGCATGTACTCCTCTGTTGT+TGG 0.418606 6:-86069482 None:intergenic
TAAAGCAACTTCATGTAATC+CGG 0.421098 6:-86062287 None:intergenic
TAAAGCAACTTCATGTAATC+CGG 0.421098 6:-86068567 None:intergenic
ACTACTCTATTTCGTGCATA+AGG 0.430355 6:-86061803 None:intergenic
ATAAATACTCAAATTTCTAA+AGG 0.433133 6:-86070061 None:intergenic
GACAAAAGACATCTTTGATT+GGG 0.442878 6:+86063138 MsG0680034348.01.T01:CDS
AAAAGAAAATTGACAACGCT+TGG 0.444020 6:+86069873 MsG0680034348.01.T01:CDS
TGCTATACATTGCAGGCTTA+GGG 0.448464 6:+86069628 MsG0680034348.01.T01:CDS
TAGGTGGGATATTAATTGCT+TGG 0.452782 6:+86062256 MsG0680034348.01.T01:intron
TAGGTGGGATATTAATTGCT+TGG 0.452782 6:+86068536 MsG0680034348.01.T01:intron
TACGACTTCTTACATTGGAA+TGG 0.454510 6:+86063105 MsG0680034348.01.T01:CDS
TACGACTTCTTACATTGGAA+TGG 0.454510 6:+86069541 MsG0680034348.01.T01:CDS
ATAGTTAGCATTCAGCCATC+TGG 0.458951 6:-86063020 None:intergenic
ATAGTTAGCATTCAGCCATC+TGG 0.458951 6:-86069456 None:intergenic
TAATGAAATTCTACTTGCAT+TGG 0.460272 6:+86067875 MsG0680034348.01.T01:CDS
GATGACACATACGATGCATA+TGG 0.460937 6:+86068215 MsG0680034348.01.T01:CDS
ACGACTTCTTACATTGGAAT+GGG 0.460983 6:+86063106 MsG0680034348.01.T01:CDS
ACGACTTCTTACATTGGAAT+GGG 0.460983 6:+86069542 MsG0680034348.01.T01:CDS
GCTCCAAAGCCTGCATCAAA+AGG 0.461740 6:+86067917 MsG0680034348.01.T01:CDS
TTGCAAGAGAACGACTCAAT+CGG 0.467074 6:-86067755 None:intergenic
GATGACACATATGATGCATA+TGG 0.467097 6:+86061923 MsG0680034348.01.T01:CDS
GTCATCAATGTATGATAAAA+CGG 0.468585 6:-86061906 None:intergenic
GAGCAAGAAATGAAGAAAGA+AGG 0.470516 6:+86062341 MsG0680034348.01.T01:CDS
GAGCAAGAAATGAAGAAAGA+AGG 0.470516 6:+86068621 MsG0680034348.01.T01:CDS
TTTGACACAGAAGTTGAGCC+AGG 0.472843 6:+86064482 MsG0680034348.01.T01:CDS
GAGGGAATATGATTTGAATA+GGG 0.475500 6:+86069829 MsG0680034348.01.T01:CDS
TGCAAGAGAACGACTCAATC+GGG 0.478988 6:-86067754 None:intergenic
TTCCTTGCTTGAGAATATTG+AGG 0.494460 6:-86061863 None:intergenic
ATATTGGGGCTCAAAATATA+CGG 0.495144 6:-86068141 None:intergenic
TTCTGGTCACCTTGAGTCGA+TGG 0.501829 6:+86067728 MsG0680034348.01.T01:CDS
TTGAGAACACACGTCAGAAT+AGG 0.502783 6:-86069941 None:intergenic
GACAAAAGACATCTTTGATC+GGG 0.504960 6:+86069574 MsG0680034348.01.T01:CDS
AGATGTGTTCAACCAATTCA+AGG 0.513117 6:+86067584 MsG0680034348.01.T01:intron
GCCTCACATATGATGGTTCA+TGG 0.522278 6:+86067672 MsG0680034348.01.T01:CDS
TAAGAAGTCGTAGCCAACAC+TGG 0.522936 6:-86063094 None:intergenic
TAAGAAGTCGTAGCCAACAC+TGG 0.522936 6:-86069530 None:intergenic
AGCCTCAATATTCTCAAGCA+AGG 0.525283 6:+86061861 MsG0680034348.01.T01:CDS
GTGGGATATTAATTGCTTGG+AGG 0.529634 6:+86062259 MsG0680034348.01.T01:CDS
GTGGGATATTAATTGCTTGG+AGG 0.529634 6:+86068539 MsG0680034348.01.T01:CDS
TGGCCTCACTCATATAAGCT+TGG 0.531321 6:-86063000 None:intergenic
TGGCCTCACTCATATAAGCT+TGG 0.531321 6:-86069436 None:intergenic
TTCCTTGCTTGAGAATATTG+GGG 0.534381 6:-86068155 None:intergenic
ATAGGTAACGGAACTTCAGT+TGG 0.538099 6:-86069923 None:intergenic
AAACAGTTTGAGCAGAAAAG+AGG 0.539017 6:+86069776 MsG0680034348.01.T01:intron
AGCCCCAATATTCTCAAGCA+AGG 0.547455 6:+86068153 MsG0680034348.01.T01:CDS
CTTATATGAGTGAGGCCAGA+TGG 0.549142 6:+86063005 MsG0680034348.01.T01:CDS
CTTATATGAGTGAGGCCAGA+TGG 0.549142 6:+86069441 MsG0680034348.01.T01:CDS
CGACAAAAGACATCTTTGAT+CGG 0.553288 6:+86069573 MsG0680034348.01.T01:CDS
ATCGGGTGGCCATCGACTCA+AGG 0.563910 6:-86067737 None:intergenic
GTACTTGGAATGTTATATGA+GGG 0.567173 6:+86069811 MsG0680034348.01.T01:CDS
GTATGAAGCCTCACATATGA+TGG 0.567934 6:+86067665 MsG0680034348.01.T01:CDS
ATCAAGTGGTTACCCAGTGT+TGG 0.570889 6:+86063081 MsG0680034348.01.T01:CDS
ATCAAGTGGTTACCCAGTGT+TGG 0.570889 6:+86069517 MsG0680034348.01.T01:CDS
AATATTGGTCGTAGATGTTG+AGG 0.578146 6:+86067629 MsG0680034348.01.T01:CDS
ATACAGGTGGTGGAACGAGT+TGG 0.584388 6:+86068055 MsG0680034348.01.T01:intron
TTGGCTACGACTTCTTACAT+TGG 0.586299 6:+86063100 MsG0680034348.01.T01:CDS
TTGGCTACGACTTCTTACAT+TGG 0.586299 6:+86069536 MsG0680034348.01.T01:CDS
ACTACTCTATCTCGTGCATA+CGG 0.592321 6:-86068095 None:intergenic
CACATATCAACAATATCAAG+TGG 0.594145 6:+86063067 MsG0680034348.01.T01:CDS
CACATATCAACAATATCAAG+TGG 0.594145 6:+86069503 MsG0680034348.01.T01:CDS
GATTTCCACCCTAGCGTTTG+GGG 0.596026 6:+86061767 MsG0680034348.01.T01:CDS
GGATGAAATTGTGTTAAGTG+AGG 0.596198 6:+86063213 MsG0680034348.01.T01:CDS
AATCTCCCCAAACGCTAGGG+TGG 0.601357 6:-86061772 None:intergenic
GATAACTACACACACTCTGA+CGG 0.610210 6:+86070001 MsG0680034348.01.T01:CDS
AAGAAGTCGTAGCCAACACT+GGG 0.613680 6:-86063093 None:intergenic
AAGAAGTCGTAGCCAACACT+GGG 0.613680 6:-86069529 None:intergenic
AACCAATTCAAGGACGAGCA+AGG 0.615624 6:+86067594 MsG0680034348.01.T01:CDS
TAACTTCTTGACACTAGCCT+AGG 0.617318 6:-86067822 None:intergenic
ACCATGAACCATCATATGTG+AGG 0.634158 6:-86067673 None:intergenic
ATATTGGTCGTAGATGTTGA+GGG 0.641581 6:+86067630 MsG0680034348.01.T01:CDS
AATCCAAGCTTATATGAGTG+AGG 0.644710 6:+86062997 MsG0680034348.01.T01:CDS
AATCCAAGCTTATATGAGTG+AGG 0.644710 6:+86069433 MsG0680034348.01.T01:CDS
GGATGAAATTGTGTCAAGCG+AGG 0.666273 6:+86069649 MsG0680034348.01.T01:CDS
ACACACGTCAGAATAGGTAA+CGG 0.688917 6:-86069935 None:intergenic
TAACTATATACCAACAACAG+AGG 0.703519 6:+86063036 MsG0680034348.01.T01:CDS
TAACTATATACCAACAACAG+AGG 0.703519 6:+86069472 MsG0680034348.01.T01:CDS
AAGAGAACGACTCAATCGGG+TGG 0.704555 6:-86067751 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTAAATTATATTTCTTTAG+TGG + Chr6:86066715-86066734 MsG0680034348.01.T01:intron 10.0%
!! CATATAAAATAAATGTTAAT+AGG - Chr6:86069387-86069406 None:intergenic 10.0%
!! GAAAAAAAATTACATAAAAT+AGG + Chr6:86067230-86067249 MsG0680034348.01.T01:intron 10.0%
!! TGATTATAAAGTAATATTAA+TGG + Chr6:86067345-86067364 MsG0680034348.01.T01:intron 10.0%
!! TGTATTAAATTATATTTCTT+TGG + Chr6:86066743-86066762 MsG0680034348.01.T01:intron 10.0%
!!! AATTTCATTTAAATTTTTTG+TGG + Chr6:86068779-86068798 MsG0680034348.01.T01:intron 10.0%
!!! CATTTTTTATGTTTTTAATT+TGG + Chr6:86067089-86067108 MsG0680034348.01.T01:intron 10.0%
!!! CTATTAACATTTATTTTATA+TGG + Chr6:86069385-86069404 MsG0680034348.01.T01:intron 10.0%
!!! TAATTACATAGTTTTTTTTT+TGG + Chr6:86069354-86069373 MsG0680034348.01.T01:intron 10.0%
!!! TTTAAAGAATTTAAAATTCT+AGG - Chr6:86066369-86066388 None:intergenic 10.0%
!! AAATGTATAACTTCTTAATT+CGG - Chr6:86066243-86066262 None:intergenic 15.0%
!! AATAAAATAAAAACTAATCG+TGG - Chr6:86066506-86066525 None:intergenic 15.0%
!! ATAAAATAAAAACTAATCGT+GGG - Chr6:86066505-86066524 None:intergenic 15.0%
!! ATAAAATAGTTAGTCAAAAA+AGG + Chr6:86066846-86066865 MsG0680034348.01.T01:intron 15.0%
!! ATAAATACTCAAATTTCTAA+AGG - Chr6:86063629-86063648 None:intergenic 15.0%
!! ATAAATTACAAGGAATTTAA+AGG - Chr6:86064863-86064882 None:intergenic 15.0%
!! ATATATCATTTAATGTTATG+AGG + Chr6:86066317-86066336 MsG0680034348.01.T01:intron 15.0%
!! ATTAAATTATATTTCTTTGG+TGG + Chr6:86066746-86066765 MsG0680034348.01.T01:intron 15.0%
!! ATTATTTGTGCATATAAATT+AGG + Chr6:86066821-86066840 MsG0680034348.01.T01:intron 15.0%
!! CATATGAAATAAATGTTAAT+AGG - Chr6:86062951-86062970 None:intergenic 15.0%
!! CTATTAACATTTATTTCATA+TGG + Chr6:86062949-86062968 MsG0680034348.01.T01:intron 15.0%
!! TAAAAATATATTACAAGACT+AGG + Chr6:86063915-86063934 MsG0680034348.01.T01:intron 15.0%
!! TATAAAGACAAAAATAGTAT+AGG - Chr6:86068036-86068055 None:intergenic 15.0%
!! TATATCATTTAATGTTATGA+GGG + Chr6:86066318-86066337 MsG0680034348.01.T01:intron 15.0%
!! TTAACATCATTTAATTACAT+AGG + Chr6:86062908-86062927 MsG0680034348.01.T01:intron 15.0%
!! TTGTAGAATTAATATTACAA+AGG - Chr6:86069260-86069279 None:intergenic 15.0%
!!! AAACATTTTTACATCATTTT+AGG + Chr6:86062601-86062620 MsG0680034348.01.T01:intron 15.0%
!!! AATCAAAATTATTTTTAGGT+GGG + Chr6:86062241-86062260 MsG0680034348.01.T01:intron 15.0%
!!! ATAAATAAGAGTTTTCTATA+GGG + Chr6:86064701-86064720 MsG0680034348.01.T01:intron 15.0%
!!! ATTGTTGTTTAATATTATTG+TGG + Chr6:86067543-86067562 MsG0680034348.01.T01:intron 15.0%
!!! ATTTCGTTTTAAATTTTGTA+CGG + Chr6:86062500-86062519 MsG0680034348.01.T01:intron 15.0%
!!! ATTTTATTTAAATATGTCCT+TGG + Chr6:86066523-86066542 MsG0680034348.01.T01:intron 15.0%
!!! TATAAATAAGAGTTTTCTAT+AGG + Chr6:86064700-86064719 MsG0680034348.01.T01:intron 15.0%
!!! TTAATTACATAGGTTTTTTT+TGG + Chr6:86062918-86062937 MsG0680034348.01.T01:intron 15.0%
!!! TTACTTACTATTTTGTTATT+TGG - Chr6:86065522-86065541 None:intergenic 15.0%
!!! TTGCAATCAAAATTATTTTT+AGG + Chr6:86062237-86062256 MsG0680034348.01.T01:intron 15.0%
!!! TTTTATTTAAATATGTCCTT+GGG + Chr6:86066524-86066543 MsG0680034348.01.T01:intron 15.0%
!! AAAAAAGGTTCTTACTTAAT+AGG - Chr6:86067385-86067404 None:intergenic 20.0%
!! AAATTATATTTCTTTAGTGG+TGG + Chr6:86066718-86066737 MsG0680034348.01.T01:intron 20.0%
!! AAATTGCATAAACGAATTAA+AGG - Chr6:86064831-86064850 None:intergenic 20.0%
!! AACAAAATAAATTACACATG+TGG - Chr6:86063698-86063717 None:intergenic 20.0%
!! AATAAGTAACTAGAATTGTT+CGG - Chr6:86065576-86065595 None:intergenic 20.0%
!! ACAAAAATCTTGTTAACTTT+AGG + Chr6:86065359-86065378 MsG0680034348.01.T01:intron 20.0%
!! ATATGCTTAAATAAAATTGC+TGG - Chr6:86066687-86066706 None:intergenic 20.0%
!! CATTCTTTGTGAAAATTTAA+AGG - Chr6:86064277-86064296 None:intergenic 20.0%
!! TCGTAGAATTAATATTACAA+AGG - Chr6:86062825-86062844 None:intergenic 20.0%
!! TGAAATTCAAATAATGTCTA+GGG + Chr6:86064628-86064647 MsG0680034348.01.T01:intron 20.0%
!! TGTAAAAAACTTATTATCCA+TGG + Chr6:86069018-86069037 MsG0680034348.01.T01:intron 20.0%
!! TGTGTCTAATAATAAAAGAT+AGG + Chr6:86067208-86067227 MsG0680034348.01.T01:intron 20.0%
!! TTAAAGCAAATGAAAGTAAA+AGG - Chr6:86066041-86066060 None:intergenic 20.0%
!! TTCTTTAAACAATAGAGTAA+TGG + Chr6:86062208-86062227 MsG0680034348.01.T01:intron 20.0%
!! TTGAAATTCAAATAATGTCT+AGG + Chr6:86064627-86064646 MsG0680034348.01.T01:intron 20.0%
!! TTTATTTAAATATGTCCTTG+GGG + Chr6:86066525-86066544 MsG0680034348.01.T01:intron 20.0%
!! TTTCAGATAAAAAGAAGAAA+AGG - Chr6:86064349-86064368 None:intergenic 20.0%
!!! AAACGAAAAAGACATTTTTT+GGG + Chr6:86064373-86064392 MsG0680034348.01.T01:intron 20.0%
!!! AATCAAAATGATTTTTAGGT+GGG + Chr6:86068521-86068540 MsG0680034348.01.T01:intron 20.0%
!!! AATTTTTTGTGGTTATCAAA+TGG + Chr6:86068790-86068809 MsG0680034348.01.T01:intron 20.0%
!!! ACTAAATTATTTAAAGCACA+AGG + Chr6:86063855-86063874 MsG0680034348.01.T01:intron 20.0%
!!! ATAGTACAATTTTTCATTCT+TGG - Chr6:86063885-86063904 None:intergenic 20.0%
!!! ATGTTAATTTTTAATGGCAA+AGG - Chr6:86066479-86066498 None:intergenic 20.0%
!!! ATTGTTTTATCTCTAAAGTT+TGG - Chr6:86062038-86062057 None:intergenic 20.0%
!!! CAATCAAAATTATTTTTAGG+TGG + Chr6:86062240-86062259 MsG0680034348.01.T01:intron 20.0%
!!! CTATTTTTGTCTTTATATAC+AGG + Chr6:86068039-86068058 MsG0680034348.01.T01:intron 20.0%
!!! GGGATTATGTTAATTTTTAA+TGG - Chr6:86066485-86066504 None:intergenic 20.0%
!!! TATCTTGACATTTTAATTAC+TGG + Chr6:86069286-86069305 MsG0680034348.01.T01:intron 20.0%
!!! TATCTTGACATTTTAATTAG+TGG + Chr6:86062851-86062870 MsG0680034348.01.T01:intron 20.0%
!!! TGAATTAGAACTTTTTACAA+AGG + Chr6:86061955-86061974 MsG0680034348.01.T01:CDS 20.0%
!!! TGAATTAGAACTTTTTACTA+AGG + Chr6:86068247-86068266 MsG0680034348.01.T01:CDS 20.0%
!!! TGATTCTTTTAATAGAGTAA+TGG + Chr6:86068488-86068507 MsG0680034348.01.T01:intron 20.0%
!!! TTAAATTTTCACAAAGAATG+AGG + Chr6:86064277-86064296 MsG0680034348.01.T01:intron 20.0%
!!! TTGCAATCAAAATGATTTTT+AGG + Chr6:86068517-86068536 MsG0680034348.01.T01:intron 20.0%
!!! TTTATATTTTCCATTCATTG+TGG + Chr6:86063795-86063814 MsG0680034348.01.T01:intron 20.0%
! AAAATAAATTACACATGTGG+TGG - Chr6:86063695-86063714 None:intergenic 25.0%
! AAATTATATTTCTTTGGTGG+TGG + Chr6:86066749-86066768 MsG0680034348.01.T01:intron 25.0%
! AACTCAGTTAATAAAATCCA+TGG - Chr6:86069038-86069057 None:intergenic 25.0%
! AACTGTTACATTAAAAGGAA+CGG + Chr6:86065322-86065341 MsG0680034348.01.T01:intron 25.0%
! AAGAAAAATGTATCATCATG+AGG + Chr6:86062661-86062680 MsG0680034348.01.T01:intron 25.0%
! AATATATCCATCTTCAATCT+TGG + Chr6:86068403-86068422 MsG0680034348.01.T01:intron 25.0%
! AATATTAATGGCATACATGT+AGG + Chr6:86067357-86067376 MsG0680034348.01.T01:intron 25.0%
! ACAACCAATATATAGTATCA+CGG - Chr6:86065905-86065924 None:intergenic 25.0%
! ACAAGGAATTTAAAGGAAAT+AGG - Chr6:86064856-86064875 None:intergenic 25.0%
! ATATTATAATGAATACCCCA+AGG - Chr6:86066543-86066562 None:intergenic 25.0%
! ATGCAAGTAGAATTTCATTA+TGG - Chr6:86067875-86067894 None:intergenic 25.0%
! ATGTTATGTCTTTACTTTAG+CGG + Chr6:86065738-86065757 MsG0680034348.01.T01:intron 25.0%
! GAGAAAATAATTAGTTGCTA+TGG + Chr6:86065418-86065437 MsG0680034348.01.T01:intron 25.0%
! GAGAATAATTAAAAGAGATG+AGG - Chr6:86067283-86067302 None:intergenic 25.0%
! GATTCATCACATGAATAAAA+TGG + Chr6:86065940-86065959 MsG0680034348.01.T01:intron 25.0%
! GGTATTCATTATAATATCCA+TGG + Chr6:86066546-86066565 MsG0680034348.01.T01:intron 25.0%
! GTCATCAATGTATGATAAAA+CGG - Chr6:86061909-86061928 None:intergenic 25.0%
! GTCATCAATGTATGATAAAA+TGG - Chr6:86061909-86061928 None:intergenic 25.0%
! TAAAGTAAAGACATAACATG+TGG - Chr6:86065737-86065756 None:intergenic 25.0%
! TAATGAAATTCTACTTGCAT+TGG + Chr6:86067875-86067894 MsG0680034348.01.T01:CDS 25.0%
! TGCAAGTAGAATTTCATTAT+GGG - Chr6:86067874-86067893 None:intergenic 25.0%
! TTCAAAAAACTTATTGTCCA+TGG + Chr6:86062740-86062759 MsG0680034348.01.T01:intron 25.0%
! TTCAATCAAATAACTTCATG+AGG - Chr6:86068956-86068975 None:intergenic 25.0%
! TTCATTTATAGCATCATCAT+CGG - Chr6:86065272-86065291 None:intergenic 25.0%
! TTGAGTAAAACAAATTAGAC+AGG + Chr6:86067120-86067139 MsG0680034348.01.T01:intron 25.0%
! TTTATTCATGTGATGAATCA+AGG - Chr6:86065939-86065958 None:intergenic 25.0%
!! AAATCTTGTTAACTTTAGGA+AGG + Chr6:86065363-86065382 MsG0680034348.01.T01:intron 25.0%
!! AATTTTGTACGGTTATCAAA+TGG + Chr6:86062511-86062530 MsG0680034348.01.T01:intron 25.0%
!! AGACGAAATTAATCAAGTTT+TGG + Chr6:86066933-86066952 MsG0680034348.01.T01:intron 25.0%
!! AGTCCATATTTTCATGTTAA+TGG - Chr6:86066572-86066591 None:intergenic 25.0%
!! GACATATATTAATGATTTGC+TGG + Chr6:86063598-86063617 MsG0680034348.01.T01:intron 25.0%
!! GTAATATTTGACTTTGTCAT+GGG + Chr6:86067185-86067204 MsG0680034348.01.T01:intron 25.0%
!! TAAGTTGAGATATATATACC+AGG - Chr6:86067054-86067073 None:intergenic 25.0%
!! TCAATCCTTTAGAAATTTGA+GGG + Chr6:86063621-86063640 MsG0680034348.01.T01:intron 25.0%
!! TCATGATGATACATTTTTCT+TGG - Chr6:86062662-86062681 None:intergenic 25.0%
!! TCTTTAATCTAGTTTAGAGT+TGG + Chr6:86068359-86068378 MsG0680034348.01.T01:intron 25.0%
!! TGATGATGCTATAAATGAAT+AGG + Chr6:86065273-86065292 MsG0680034348.01.T01:intron 25.0%
!! TGATTATTTTCCTTTACTTG+AGG - Chr6:86065389-86065408 None:intergenic 25.0%
!! TTTTTACAAAGGCAATTGAA+AGG + Chr6:86061966-86061985 MsG0680034348.01.T01:CDS 25.0%
!! TTTTTACTAAGGCAATTGAA+AGG + Chr6:86068258-86068277 MsG0680034348.01.T01:CDS 25.0%
!! TTTTTGTCTTTATATACAGG+TGG + Chr6:86068042-86068061 MsG0680034348.01.T01:intron 25.0%
!!! AACGAAAAAGACATTTTTTG+GGG + Chr6:86064374-86064393 MsG0680034348.01.T01:intron 25.0%
!!! AACTCTTACTTCTTTTAAGA+AGG - Chr6:86062387-86062406 None:intergenic 25.0%
!!! ACTCTTACTTCTTTTAAGAA+GGG - Chr6:86062386-86062405 None:intergenic 25.0%
!!! ATTTTGTGATTTGTTGATAG+CGG - Chr6:86065080-86065099 None:intergenic 25.0%
!!! CAAACGAAAAAGACATTTTT+TGG + Chr6:86064372-86064391 MsG0680034348.01.T01:intron 25.0%
!!! CAATCAAAATGATTTTTAGG+TGG + Chr6:86068520-86068539 MsG0680034348.01.T01:intron 25.0%
!!! TACTTATTTTTGTAAGTGCA+CGG + Chr6:86065588-86065607 MsG0680034348.01.T01:intron 25.0%
!!! TCTTAAGCTTTGTTTTACTT+GGG - Chr6:86067781-86067800 None:intergenic 25.0%
AAAAATATTGGAAGAGGCTT+TGG + Chr6:86067698-86067717 MsG0680034348.01.T01:CDS 30.0%
AAAAGAAAATTGACAACGCT+TGG + Chr6:86063437-86063456 MsG0680034348.01.T01:intron 30.0%
AAACAGTTTGAGTAGAAAAG+AGG + Chr6:86063340-86063359 MsG0680034348.01.T01:intron 30.0%
AAACTGAGTTCATATAACCA+TGG - Chr6:86062760-86062779 None:intergenic 30.0%
AAATCTCAATGCTCTTAGTA+TGG + Chr6:86065096-86065115 MsG0680034348.01.T01:intron 30.0%
AAATGATTTAGATGCCTACA+GGG + Chr6:86064056-86064075 MsG0680034348.01.T01:intron 30.0%
AATTTATCCATCTTCGATCT+TGG + Chr6:86062120-86062139 MsG0680034348.01.T01:intron 30.0%
ACACTCACACACATATATAA+AGG - Chr6:86066443-86066462 None:intergenic 30.0%
ACTGTTACATTAAAAGGAAC+GGG + Chr6:86065323-86065342 MsG0680034348.01.T01:intron 30.0%
AGAAAAGGGGATAAATTACA+AGG - Chr6:86064873-86064892 None:intergenic 30.0%
AGGAAACTTCAGTGAAATAT+TGG + Chr6:86067614-86067633 MsG0680034348.01.T01:CDS 30.0%
ATAATTAGTTGCTATGGTTG+CGG + Chr6:86065424-86065443 MsG0680034348.01.T01:intron 30.0%
ATATTGGGGCTCAAAATATA+CGG - Chr6:86068144-86068163 None:intergenic 30.0%
ATGATATCTGTAAAGGAGAT+GGG - Chr6:86064154-86064173 None:intergenic 30.0%
ATGTCAAAAAGTTAGCACTA+TGG - Chr6:86066141-86066160 None:intergenic 30.0%
ATGTTTATGAGAATTATCGC+TGG + Chr6:86066625-86066644 MsG0680034348.01.T01:intron 30.0%
CACATATCAACAATATCAAG+TGG + Chr6:86063067-86063086 MsG0680034348.01.T01:CDS 30.0%
CATCAATCCTAATGAGAAAT+CGG + Chr6:86061724-86061743 MsG0680034348.01.T01:CDS 30.0%
CTCATCAGTTCAATCTATAA+TGG + Chr6:86065780-86065799 MsG0680034348.01.T01:intron 30.0%
GACAAAAGACATCTTTGATT+GGG + Chr6:86063138-86063157 MsG0680034348.01.T01:CDS 30.0%
GAGGGAATATGATATGAATA+GGG + Chr6:86063393-86063412 MsG0680034348.01.T01:intron 30.0%
GAGGGAATATGATTTGAATA+GGG + Chr6:86069829-86069848 MsG0680034348.01.T01:CDS 30.0%
GGTACAACTGTTACATTAAA+AGG + Chr6:86065317-86065336 MsG0680034348.01.T01:intron 30.0%
GGTTCATGGTGAAAAAATAT+TGG + Chr6:86067686-86067705 MsG0680034348.01.T01:CDS 30.0%
GTACTTGGAATGTTATATGA+GGG + Chr6:86063375-86063394 MsG0680034348.01.T01:intron 30.0%
TAAAGCAACTTCATGTAATC+CGG - Chr6:86062290-86062309 None:intergenic 30.0%
TAACTATATACCAACAACAG+AGG + Chr6:86063036-86063055 MsG0680034348.01.T01:CDS 30.0%
TATATTCGTTCAGACTATGA+TGG + Chr6:86065688-86065707 MsG0680034348.01.T01:intron 30.0%
TGAACCGTGATACTATATAT+TGG + Chr6:86065898-86065917 MsG0680034348.01.T01:intron 30.0%
TGAGGGAATATGATATGAAT+AGG + Chr6:86063392-86063411 MsG0680034348.01.T01:intron 30.0%
TGAGGGAATATGATTTGAAT+AGG + Chr6:86069828-86069847 MsG0680034348.01.T01:CDS 30.0%
TGAGTAGATTCTTGAGAAAA+GGG - Chr6:86064887-86064906 None:intergenic 30.0%
TGATGCTATAAATGAATAGG+AGG + Chr6:86065276-86065295 MsG0680034348.01.T01:intron 30.0%
TGCAAAAAACTTATTGTCCA+TGG + Chr6:86069174-86069193 MsG0680034348.01.T01:intron 30.0%
TGGCCATTAACATGAAAATA+TGG + Chr6:86066566-86066585 MsG0680034348.01.T01:intron 30.0%
TGGTGAAAAAATATTGGAAG+AGG + Chr6:86067692-86067711 MsG0680034348.01.T01:CDS 30.0%
TGGTTATCAAATGGAAGTTT+AGG + Chr6:86068799-86068818 MsG0680034348.01.T01:intron 30.0%
TTGAGTAGATTCTTGAGAAA+AGG - Chr6:86064888-86064907 None:intergenic 30.0%
TTGCATAAACGAATTAAAGG+TGG - Chr6:86064828-86064847 None:intergenic 30.0%
TTTCCTTGCTTGAGAATATT+GGG - Chr6:86061867-86061886 None:intergenic 30.0%
! AAAGTATCACCATAATCACT+AGG + Chr6:86062636-86062655 MsG0680034348.01.T01:intron 30.0%
! AAAGTATCACCATAATCACT+TGG + Chr6:86062636-86062655 MsG0680034348.01.T01:intron 30.0%
! ACCAAAAAAGTGTAAGAATC+AGG - Chr6:86064931-86064950 None:intergenic 30.0%
! ATCAAGTTCAACTCAAGTTT+TGG + Chr6:86064444-86064463 MsG0680034348.01.T01:CDS 30.0%
! CGTAATATTTGACTTTGTCA+TGG + Chr6:86067184-86067203 MsG0680034348.01.T01:intron 30.0%
! GCAGCAACATTAACAATTTT+TGG - Chr6:86063175-86063194 None:intergenic 30.0%
! GTCAATCCTTTAGAAATTTG+AGG + Chr6:86063620-86063639 MsG0680034348.01.T01:intron 30.0%
! GTTGCTTTATAAATCACTCT+TGG + Chr6:86062301-86062320 MsG0680034348.01.T01:CDS 30.0%
! TATTTTCATGTTAATGGCCA+TGG - Chr6:86066566-86066585 None:intergenic 30.0%
! TCATGAGGATACATTTTTCT+TGG - Chr6:86068941-86068960 None:intergenic 30.0%
! TGTTATTTGGTATAAACGAC+TGG - Chr6:86065509-86065528 None:intergenic 30.0%
! TTTCTTTTGGCATTCTTGAA+TGG - Chr6:86063425-86063444 None:intergenic 30.0%
! TTTTCCTTGCTTGAGAATAT+TGG - Chr6:86061868-86061887 None:intergenic 30.0%
! TTTTCTCAAGAATCTACTCA+AGG + Chr6:86064887-86064906 MsG0680034348.01.T01:intron 30.0%
! TTTTGCTAACGAGTGTTATA+AGG + Chr6:86066201-86066220 MsG0680034348.01.T01:intron 30.0%
!! AAGCGTTGTCAATTTTCTTT+TGG - Chr6:86063438-86063457 None:intergenic 30.0%
!! ATTTATCGCTTTAAGGGTTT+AGG - Chr6:86064014-86064033 None:intergenic 30.0%
!! CTCTTACTTCTTTTAAGAAG+GGG - Chr6:86062385-86062404 None:intergenic 30.0%
!! GTGTTTCTGAAGTACAAAAA+AGG - Chr6:86067400-86067419 None:intergenic 30.0%
!! TTTATCGCTTTAAGGGTTTA+GGG - Chr6:86064013-86064032 None:intergenic 30.0%
!!! ACGAAAAAGACATTTTTTGG+GGG + Chr6:86064375-86064394 MsG0680034348.01.T01:intron 30.0%
!!! AGTAGTAGAATGTTGCTTTT+GGG + Chr6:86061820-86061839 MsG0680034348.01.T01:CDS 30.0%
!!! AGTAGTTGAATGTTGCTTTT+GGG + Chr6:86068112-86068131 MsG0680034348.01.T01:CDS 30.0%
!!! GTCTTAAGCTTTGTTTTACT+TGG - Chr6:86067782-86067801 None:intergenic 30.0%
!!! TAGCGTCGTTTTTTTTTTGA+AGG - Chr6:86066895-86066914 None:intergenic 30.0%
!!! TCCTGATTCTTACACTTTTT+TGG + Chr6:86064927-86064946 MsG0680034348.01.T01:intron 30.0%
AAACAGTTTGAGCAGAAAAG+AGG + Chr6:86069776-86069795 MsG0680034348.01.T01:intron 35.0%
AATATTGGTCGTAGATGTTG+AGG + Chr6:86067629-86067648 MsG0680034348.01.T01:CDS 35.0%
AATCCAAGCTTATATGAGTG+AGG + Chr6:86062997-86063016 MsG0680034348.01.T01:CDS 35.0%
ACGACTTCTTACATTGGAAT+GGG + Chr6:86063106-86063125 MsG0680034348.01.T01:CDS 35.0%
ACTACTCTATTTCGTGCATA+AGG - Chr6:86061806-86061825 None:intergenic 35.0%
AGATGTGTTCAACCAATTCA+AGG + Chr6:86067584-86067603 MsG0680034348.01.T01:intron 35.0%
AGTATTCATTGTCTTTCCCA+GGG + Chr6:86064099-86064118 MsG0680034348.01.T01:intron 35.0%
AGTCTGAACGAATATACTGA+GGG - Chr6:86065684-86065703 None:intergenic 35.0%
AGTTGTACCGTCTTAGAAAT+AGG - Chr6:86065306-86065325 None:intergenic 35.0%
ATATTGGTCGTAGATGTTGA+GGG + Chr6:86067630-86067649 MsG0680034348.01.T01:CDS 35.0%
CAGAGAGAATTTACCTGTTT+AGG + Chr6:86065646-86065665 MsG0680034348.01.T01:intron 35.0%
CATCTCCTTTACAGATATCA+TGG + Chr6:86064153-86064172 MsG0680034348.01.T01:intron 35.0%
CATGATATCTGTAAAGGAGA+TGG - Chr6:86064155-86064174 None:intergenic 35.0%
CGACAAAAGACATCTTTGAT+CGG + Chr6:86063137-86063156 MsG0680034348.01.T01:CDS 35.0%
CGACAAAAGACATCTTTGAT+TGG + Chr6:86063137-86063156 MsG0680034348.01.T01:CDS 35.0%
CGTACTTGGAATGTTATATG+AGG + Chr6:86063374-86063393 MsG0680034348.01.T01:intron 35.0%
CGTTTGTTTACTAAGAACCA+GGG + Chr6:86065048-86065067 MsG0680034348.01.T01:intron 35.0%
GAAATGATTTAGATGCCTAC+AGG + Chr6:86064055-86064074 MsG0680034348.01.T01:intron 35.0%
GACAAAAGACATCTTTGATC+GGG + Chr6:86069574-86069593 MsG0680034348.01.T01:CDS 35.0%
GAGCAAGAAATGAAGAAAGA+AGG + Chr6:86062341-86062360 MsG0680034348.01.T01:CDS 35.0%
GAGGGAATTCAAATACTTTG+AGG + Chr6:86066336-86066355 MsG0680034348.01.T01:intron 35.0%
GAGTAGATTCTTGAGAAAAG+GGG - Chr6:86064886-86064905 None:intergenic 35.0%
GATGACACATATGATGCATA+TGG + Chr6:86061923-86061942 MsG0680034348.01.T01:CDS 35.0%
GGATAGATGACGTCATAAAA+AGG + Chr6:86064239-86064258 MsG0680034348.01.T01:intron 35.0%
GGATGAAATTGTGTTAAGTG+AGG + Chr6:86063213-86063232 MsG0680034348.01.T01:CDS 35.0%
TAAGTGCACGGTATAAAAGT+AGG + Chr6:86065600-86065619 MsG0680034348.01.T01:intron 35.0%
TACGACTTCTTACATTGGAA+TGG + Chr6:86063105-86063124 MsG0680034348.01.T01:CDS 35.0%
TAGGTGGGATATTAATTGCT+TGG + Chr6:86062256-86062275 MsG0680034348.01.T01:intron 35.0%
TAGTCTGAACGAATATACTG+AGG - Chr6:86065685-86065704 None:intergenic 35.0%
TATGTCTTTACTTTAGCGGA+AGG + Chr6:86065742-86065761 MsG0680034348.01.T01:intron 35.0%
TCCTTTACAGATATCATGGA+CGG + Chr6:86064157-86064176 MsG0680034348.01.T01:intron 35.0%
TGAAACTCTCACTTTGGTTA+TGG + Chr6:86065475-86065494 MsG0680034348.01.T01:intron 35.0%
TGCGTGATTTATCGCTTTAA+GGG - Chr6:86064020-86064039 None:intergenic 35.0%
TGTGTTTGGATGAGGTAATT+TGG - Chr6:86066396-86066415 None:intergenic 35.0%
TTACTTTCTTGCTTGCTTAC+AGG - Chr6:86063957-86063976 None:intergenic 35.0%
TTCCTTGCTTGAGAATATTG+AGG - Chr6:86061866-86061885 None:intergenic 35.0%
TTCCTTGCTTGAGAATATTG+GGG - Chr6:86061866-86061885 None:intergenic 35.0%
TTGCGTGATTTATCGCTTTA+AGG - Chr6:86064021-86064040 None:intergenic 35.0%
TTGTCTTTATATACAGGTGG+TGG + Chr6:86068045-86068064 MsG0680034348.01.T01:intron 35.0%
! AAGGACCTAATTGTTGTTAG+GGG + Chr6:86065824-86065843 MsG0680034348.01.T01:intron 35.0%
! AAGTAAAGTATCCTATCCAC+TGG + Chr6:86065536-86065555 MsG0680034348.01.T01:intron 35.0%
! AGAAGGACCTAATTGTTGTT+AGG + Chr6:86065822-86065841 MsG0680034348.01.T01:intron 35.0%
! AGTAAAGTATCCTATCCACT+GGG + Chr6:86065537-86065556 MsG0680034348.01.T01:intron 35.0%
! ATCATCATTTTGAACCGAAC+AGG - Chr6:86065245-86065264 None:intergenic 35.0%
! CTAGTCATCAAGTTTAGAGT+TGG + Chr6:86062076-86062095 MsG0680034348.01.T01:intron 35.0%
! GAAGGACCTAATTGTTGTTA+GGG + Chr6:86065823-86065842 MsG0680034348.01.T01:intron 35.0%
! GAATATCCTAAGAGTGTGTT+TGG - Chr6:86066410-86066429 None:intergenic 35.0%
! GCAGCAGCATTAACAATTTT+TGG - Chr6:86069611-86069630 None:intergenic 35.0%
! TCTACTTGCATTGGCAAAAT+TGG + Chr6:86067884-86067903 MsG0680034348.01.T01:CDS 35.0%
! TCTTCAACAGTAACTGCTTT+TGG - Chr6:86064599-86064618 None:intergenic 35.0%
! TGCAAAACCGATTTCTCATT+AGG - Chr6:86061734-86061753 None:intergenic 35.0%
! TTCAGACTATGATGGTGATA+TGG + Chr6:86065696-86065715 MsG0680034348.01.T01:intron 35.0%
! TTCCAAATTCCTTTTGATGC+AGG - Chr6:86067929-86067948 None:intergenic 35.0%
! TTTTCTTGGCCAAGTGATTA+TGG - Chr6:86062648-86062667 None:intergenic 35.0%
! TTTTCTTGGCCTAGTGATTA+TGG - Chr6:86068927-86068946 None:intergenic 35.0%
!! ACATTAAAAGGAACGGGTTA+AGG + Chr6:86065329-86065348 MsG0680034348.01.T01:intron 35.0%
!! ATTCTCTTGCTGTGCTATTT+AGG + Chr6:86066998-86067017 MsG0680034348.01.T01:intron 35.0%
!! TTCTCTTGCTGTGCTATTTA+GGG + Chr6:86066999-86067018 MsG0680034348.01.T01:intron 35.0%
!! TTCTTTTAAGAAGGGGTCAA+GGG - Chr6:86062378-86062397 None:intergenic 35.0%
!!! GAGTAGTAGAATGTTGCTTT+TGG + Chr6:86061819-86061838 MsG0680034348.01.T01:CDS 35.0%
!!! GAGTAGTTGAATGTTGCTTT+TGG + Chr6:86068111-86068130 MsG0680034348.01.T01:CDS 35.0%
AAAAAATCTCCCCAAACGCT+AGG - Chr6:86061779-86061798 None:intergenic 40.0%
AAAAATCTCCCCAAACGCTA+GGG - Chr6:86061778-86061797 None:intergenic 40.0%
AAAGAACAATCCCAGTGGAT+AGG - Chr6:86065550-86065569 None:intergenic 40.0%
AAAGTAGGTCATTGATGTGG+TGG + Chr6:86065448-86065467 MsG0680034348.01.T01:intron 40.0%
AACACCCCCTAACAACAATT+AGG - Chr6:86065832-86065851 None:intergenic 40.0%
ACACACGTCAGAATAGGTAA+CGG - Chr6:86063502-86063521 None:intergenic 40.0%
ACCATGAACCATCATATGTG+AGG - Chr6:86067676-86067695 None:intergenic 40.0%
ACCGTCCATGATATCTGTAA+AGG - Chr6:86064161-86064180 None:intergenic 40.0%
ACTACTCTATCTCGTGCATA+CGG - Chr6:86068098-86068117 None:intergenic 40.0%
AGAGATCAACCAGATGATCT+CGG - Chr6:86065003-86065022 None:intergenic 40.0%
AGCCTCAATATTCTCAAGCA+AGG + Chr6:86061861-86061880 MsG0680034348.01.T01:CDS 40.0%
AGCCTGCATCAAAAGGAATT+TGG + Chr6:86067924-86067943 MsG0680034348.01.T01:CDS 40.0%
AGGACATGTTTCTTCGTACT+TGG + Chr6:86063360-86063379 MsG0680034348.01.T01:intron 40.0%
ATAGCACAGCAAGAGAATGA+AGG - Chr6:86066996-86067015 None:intergenic 40.0%
ATAGTTAGCATTCAGCCATC+TGG - Chr6:86063023-86063042 None:intergenic 40.0%
ATGTTGCTGCTATACATTGC+AGG + Chr6:86063185-86063204 MsG0680034348.01.T01:CDS 40.0%
CAATCATTTCAAGCCAAGCT+AGG + Chr6:86065159-86065178 MsG0680034348.01.T01:intron 40.0%
CACACTCTTTGGCAAGTTAA+AGG + Chr6:86065120-86065139 MsG0680034348.01.T01:intron 40.0%
CAGATATCATGGACGGTTAT+TGG + Chr6:86064164-86064183 MsG0680034348.01.T01:intron 40.0%
CCAAAACTGAATTGCATCCT+AGG - Chr6:86066094-86066113 None:intergenic 40.0%
CGCTTGGCAAGATATAAATC+AGG + Chr6:86063453-86063472 MsG0680034348.01.T01:intron 40.0%
CTCCAGATGGTACAATGTAT+GGG + Chr6:86065862-86065881 MsG0680034348.01.T01:intron 40.0%
CTTAGTATGGTCACACTCTT+TGG + Chr6:86065109-86065128 MsG0680034348.01.T01:intron 40.0%
GAGTATTCATTGTCTTTCCC+AGG + Chr6:86064098-86064117 MsG0680034348.01.T01:intron 40.0%
GATAACTACACACACTCTGA+CGG + Chr6:86063566-86063585 MsG0680034348.01.T01:intron 40.0%
GATGACACATACGATGCATA+TGG + Chr6:86068215-86068234 MsG0680034348.01.T01:CDS 40.0%
GCGTTTGTTTACTAAGAACC+AGG + Chr6:86065047-86065066 MsG0680034348.01.T01:intron 40.0%
GGAAAAGTAGGTCATTGATG+TGG + Chr6:86065445-86065464 MsG0680034348.01.T01:intron 40.0%
GGATGAATCTTGCTCATAGA+TGG - Chr6:86067853-86067872 None:intergenic 40.0%
GGTTCTTAGTAAACAAACGC+TGG - Chr6:86065047-86065066 None:intergenic 40.0%
GGTTTCGAAGAATCCTAAAC+AGG - Chr6:86065662-86065681 None:intergenic 40.0%
GTATGAAGCCTCACATATGA+TGG + Chr6:86067665-86067684 MsG0680034348.01.T01:CDS 40.0%
GTATTCATTGTCTTTCCCAG+GGG + Chr6:86064100-86064119 MsG0680034348.01.T01:intron 40.0%
GTCAGAGTTTCCACAATGAA+TGG - Chr6:86063808-86063827 None:intergenic 40.0%
GTCTGAACGAATATACTGAG+GGG - Chr6:86065683-86065702 None:intergenic 40.0%
GTGGGATATTAATTGCTTGG+AGG + Chr6:86062259-86062278 MsG0680034348.01.T01:CDS 40.0%
GTTAAAGGAACATGAGCATG+AGG + Chr6:86065135-86065154 MsG0680034348.01.T01:intron 40.0%
TAATTGCTTGGAGGATCTTC+CGG + Chr6:86062268-86062287 MsG0680034348.01.T01:CDS 40.0%
TACCCATACATTGTACCATC+TGG - Chr6:86065867-86065886 None:intergenic 40.0%
TACTCGTTTCTCCTATAGTG+CGG - Chr6:86064776-86064795 None:intergenic 40.0%
TATTCATTGTCTTTCCCAGG+GGG + Chr6:86064101-86064120 MsG0680034348.01.T01:intron 40.0%
TCAATCTATAATGGCCATGC+TGG + Chr6:86065789-86065808 MsG0680034348.01.T01:intron 40.0%
TGCTATACATTGCAGGCTTA+GGG + Chr6:86063192-86063211 MsG0680034348.01.T01:CDS 40.0%
TTAGCAACCAAGATCGAAGA+TGG - Chr6:86062130-86062149 None:intergenic 40.0%
TTAGCGACCAAGATTGAAGA+TGG - Chr6:86068413-86068432 None:intergenic 40.0%
TTCTTAGAGTCTTCCTAGCT+TGG - Chr6:86065175-86065194 None:intergenic 40.0%
TTGAGAACACACGTCAGAAT+AGG - Chr6:86063508-86063527 None:intergenic 40.0%
TTGCAAGAGAACGACTCAAT+CGG - Chr6:86067758-86067777 None:intergenic 40.0%
TTGCTTGCTTACAGGTTGTA+AGG - Chr6:86063949-86063968 None:intergenic 40.0%
TTGGAAGTGGAGCAAAATGT+TGG + Chr6:86064183-86064202 MsG0680034348.01.T01:intron 40.0%
TTGGCTACGACTTCTTACAT+TGG + Chr6:86063100-86063119 MsG0680034348.01.T01:CDS 40.0%
TTGTAGCCTGTCGAAAATAC+AGG - Chr6:86064412-86064431 None:intergenic 40.0%
TTTAGGAAGGCCTCAAGTAA+AGG + Chr6:86065376-86065395 MsG0680034348.01.T01:intron 40.0%
! AGGACCTAATTGTTGTTAGG+GGG + Chr6:86065825-86065844 MsG0680034348.01.T01:intron 40.0%
! ATGTCTAGGGTAGTTTCTAG+CGG + Chr6:86064641-86064660 MsG0680034348.01.T01:intron 40.0%
! ATTCCTTTTGATGCAGGCTT+TGG - Chr6:86067923-86067942 None:intergenic 40.0%
! CCTAGGATGCAATTCAGTTT+TGG + Chr6:86066091-86066110 MsG0680034348.01.T01:intron 40.0%
! CTAGGAAGACTCTAAGAAGA+TGG + Chr6:86065177-86065196 MsG0680034348.01.T01:intron 40.0%
! TAACTTCTTGACACTAGCCT+AGG - Chr6:86067825-86067844 None:intergenic 40.0%
! TCTCTCAAGCTAACCGTTTT+CGG + Chr6:86065018-86065037 MsG0680034348.01.T01:intron 40.0%
!! AGGTGAGCCTATTTCTAAGA+CGG + Chr6:86065296-86065315 MsG0680034348.01.T01:intron 40.0%
!! ATAGGTAACGGAACTTCAGT+TGG - Chr6:86063490-86063509 None:intergenic 40.0%
!! CAATCTCTCGCGTTTTATTG+AGG + Chr6:86063525-86063544 MsG0680034348.01.T01:intron 40.0%
!! CTTCTTTTAAGAAGGGGTCA+AGG - Chr6:86062379-86062398 None:intergenic 40.0%
!! TGTTAGCCTGTATTTTCGAC+AGG + Chr6:86064403-86064422 MsG0680034348.01.T01:intron 40.0%
AACCAATTCAAGGACGAGCA+AGG + Chr6:86067594-86067613 MsG0680034348.01.T01:CDS 45.0%
AAGAAGTCGTAGCCAACACT+GGG - Chr6:86063096-86063115 None:intergenic 45.0%
ACTGATGAGTTCCATCGTGT+AGG - Chr6:86065769-86065788 None:intergenic 45.0%
ACTGCCTATACAGAAACCGT+CGG - Chr6:86064673-86064692 None:intergenic 45.0%
AGATCAACCAGATGATCTCG+GGG - Chr6:86065001-86065020 None:intergenic 45.0%
AGATTTCCACCCTAGCGTTT+GGG + Chr6:86061766-86061785 MsG0680034348.01.T01:CDS 45.0%
AGCCCCAATATTCTCAAGCA+AGG + Chr6:86068153-86068172 MsG0680034348.01.T01:CDS 45.0%
AGGGAATGCAAACGTCTGTT+TGG + Chr6:86064075-86064094 MsG0680034348.01.T01:intron 45.0%
ATCAAGTGGTTACCCAGTGT+TGG + Chr6:86063081-86063100 MsG0680034348.01.T01:CDS 45.0%
ATCTGGCACCAACTTCTCTT+CGG - Chr6:86064569-86064588 None:intergenic 45.0%
ATGAGAATTATCGCTGGTGC+TGG + Chr6:86066631-86066650 MsG0680034348.01.T01:intron 45.0%
ATGCTGCTGCTATACATTGC+AGG + Chr6:86069621-86069640 MsG0680034348.01.T01:CDS 45.0%
ATGCTGGAAACATCAGCAGA+AGG + Chr6:86065805-86065824 MsG0680034348.01.T01:intron 45.0%
ATTCATTGTCTTTCCCAGGG+GGG + Chr6:86064102-86064121 MsG0680034348.01.T01:intron 45.0%
CAGAACAACCGAAGAGAAGT+TGG + Chr6:86064558-86064577 MsG0680034348.01.T01:intron 45.0%
CATGGACTTTACGTTTCACC+TGG + Chr6:86067033-86067052 MsG0680034348.01.T01:intron 45.0%
CCATACATTGTACCATCTGG+AGG - Chr6:86065864-86065883 None:intergenic 45.0%
CCTCATCCAAACACACTCTT+AGG + Chr6:86066401-86066420 MsG0680034348.01.T01:intron 45.0%
CCTCCAGATGGTACAATGTA+TGG + Chr6:86065861-86065880 MsG0680034348.01.T01:intron 45.0%
CTGCTATACATTGCAGGCTT+AGG + Chr6:86063191-86063210 MsG0680034348.01.T01:CDS 45.0%
CTTATATGAGTGAGGCCAGA+TGG + Chr6:86063005-86063024 MsG0680034348.01.T01:CDS 45.0%
GAGATCAACCAGATGATCTC+GGG - Chr6:86065002-86065021 None:intergenic 45.0%
GCCTCACATATGATGGTTCA+TGG + Chr6:86067672-86067691 MsG0680034348.01.T01:CDS 45.0%
GCTCAAACTATCCGCACTAT+AGG + Chr6:86064762-86064781 MsG0680034348.01.T01:intron 45.0%
GGATGAAATTGTGTCAAGCG+AGG + Chr6:86069649-86069668 MsG0680034348.01.T01:CDS 45.0%
GGGAATGCAAACGTCTGTTT+GGG + Chr6:86064076-86064095 MsG0680034348.01.T01:intron 45.0%
GTCATCTATCCCCTCTTAGT+AGG - Chr6:86064230-86064249 None:intergenic 45.0%
TAAGAAGTCGTAGCCAACAC+TGG - Chr6:86063097-86063116 None:intergenic 45.0%
TCATGGACGGTTATTGGAAG+TGG + Chr6:86064170-86064189 MsG0680034348.01.T01:intron 45.0%
TCGAACGACAAAGTCTCCTT+GGG - Chr6:86064516-86064535 None:intergenic 45.0%
TCTTCGGTTGTTCTGCTTGT+TGG - Chr6:86064553-86064572 None:intergenic 45.0%
TGAGAATTATCGCTGGTGCT+GGG + Chr6:86066632-86066651 MsG0680034348.01.T01:intron 45.0%
TGCAAGAGAACGACTCAATC+GGG - Chr6:86067757-86067776 None:intergenic 45.0%
TGCATGTACTCCTCTGTTGT+TGG - Chr6:86063049-86063068 None:intergenic 45.0%
TGCTATGGTTGCGGAAAAGT+AGG + Chr6:86065433-86065452 MsG0680034348.01.T01:intron 45.0%
TGGCCTCACTCATATAAGCT+TGG - Chr6:86063003-86063022 None:intergenic 45.0%
TTCCTTGCTCGTCCTTGAAT+TGG - Chr6:86067599-86067618 None:intergenic 45.0%
TTCTGCTGATGTTTCCAGCA+TGG - Chr6:86065806-86065825 None:intergenic 45.0%
TTGAACCGAACAGGTAGAGA+CGG - Chr6:86065236-86065255 None:intergenic 45.0%
TTTGACACAGAAGTTGAGCC+AGG + Chr6:86064482-86064501 MsG0680034348.01.T01:CDS 45.0%
! CCTAAGAGTGTGTTTGGATG+AGG - Chr6:86066404-86066423 None:intergenic 45.0%
! CTAGCCTAGGCAAGTTTTTG+CGG - Chr6:86067812-86067831 None:intergenic 45.0%
! GTTCTAAGCACTCAACTCCT+AGG + Chr6:86066074-86066093 MsG0680034348.01.T01:intron 45.0%
!! AAATGTTGGTTCCCGAGAAC+CGG + Chr6:86064197-86064216 MsG0680034348.01.T01:intron 45.0%
!! CAAACGCTGGTTTCCGAAAA+CGG - Chr6:86065034-86065053 None:intergenic 45.0%
!! CTGTGCTATTTAGGGTGTTG+AGG + Chr6:86067007-86067026 MsG0680034348.01.T01:intron 45.0%
!! TTTAGGGTGTTGAGGCAACA+TGG + Chr6:86067015-86067034 MsG0680034348.01.T01:intron 45.0%
!!! CTGCTTTTGGCTCGTATATC+TGG - Chr6:86064586-86064605 None:intergenic 45.0%
!!! GAGGCTTTGGCTTTTACTTC+TGG + Chr6:86067711-86067730 MsG0680034348.01.T01:CDS 45.0%
!! AAAAGATAATTATTTATTAT+AGG - Chr6:86066798-86066817 None:intergenic 5.0%
AAAGGAGATGGGAGACTTCC+TGG - Chr6:86064143-86064162 None:intergenic 50.0%
AAGAGAACGACTCAATCGGG+TGG - Chr6:86067754-86067773 None:intergenic 50.0%
ATGCCCGACGGTTTCTGTAT+AGG + Chr6:86064666-86064685 MsG0680034348.01.T01:intron 50.0%
CAATATCCCCCGAGATCATC+TGG + Chr6:86064991-86065010 MsG0680034348.01.T01:intron 50.0%
CAGACGTTTGCATTCCCTGT+AGG - Chr6:86064073-86064092 None:intergenic 50.0%
CAGATTTCCACCCTAGCGTT+TGG + Chr6:86061765-86061784 MsG0680034348.01.T01:CDS 50.0%
CATTGTACCATCTGGAGGCA+AGG - Chr6:86065859-86065878 None:intergenic 50.0%
CTCTCCGCAAAAACTTGCCT+AGG + Chr6:86067805-86067824 MsG0680034348.01.T01:CDS 50.0%
CTGCCTATACAGAAACCGTC+GGG - Chr6:86064672-86064691 None:intergenic 50.0%
GATCAACCAGATGATCTCGG+GGG - Chr6:86065000-86065019 None:intergenic 50.0%
GATTTCCACCCTAGCGTTTG+GGG + Chr6:86061767-86061786 MsG0680034348.01.T01:CDS 50.0%
GCTCCAAAGCCTGCATCAAA+AGG + Chr6:86067917-86067936 MsG0680034348.01.T01:CDS 50.0%
GGACGAAAGAACAATCCCAG+TGG - Chr6:86065555-86065574 None:intergenic 50.0%
GGCGAGTGAAACTCTCACTT+TGG + Chr6:86065469-86065488 MsG0680034348.01.T01:intron 50.0%
GTCGAACGACAAAGTCTCCT+TGG - Chr6:86064517-86064536 None:intergenic 50.0%
TTCATTGTCTTTCCCAGGGG+GGG + Chr6:86064103-86064122 MsG0680034348.01.T01:intron 50.0%
TTCTGGTCACCTTGAGTCGA+TGG + Chr6:86067728-86067747 MsG0680034348.01.T01:CDS 50.0%
! TTTCTAGCGGTTATGCCCGA+CGG + Chr6:86064654-86064673 MsG0680034348.01.T01:intron 50.0%
!! ATACAGGTGGTGGAACGAGT+TGG + Chr6:86068055-86068074 MsG0680034348.01.T01:intron 50.0%
!! GTTGATAGCGGTGTTTACCC+TGG - Chr6:86065068-86065087 None:intergenic 50.0%
AATCTCCCCAAACGCTAGGG+TGG - Chr6:86061775-86061794 None:intergenic 55.0%
CCTCTTAGTAGGCCACGTTC+CGG - Chr6:86064219-86064238 None:intergenic 55.0%
CGGAACGTGGCCTACTAAGA+GGG + Chr6:86064217-86064236 MsG0680034348.01.T01:intron 55.0%
CTCGTCCGTCTCTACCTGTT+CGG + Chr6:86065228-86065247 MsG0680034348.01.T01:intron 55.0%
GGAACGTGGCCTACTAAGAG+GGG + Chr6:86064218-86064237 MsG0680034348.01.T01:intron 55.0%
GGGGAGGGCAAATCAAAACC+AGG + Chr6:86064122-86064141 MsG0680034348.01.T01:intron 55.0%
GTTACAGCCTTGCCTCCAGA+TGG + Chr6:86065849-86065868 MsG0680034348.01.T01:intron 55.0%
TAGCGGAAGGACCTACACGA+TGG + Chr6:86065755-86065774 MsG0680034348.01.T01:intron 55.0%
TCTCCTTGGGTTCTCGAACC+TGG - Chr6:86064503-86064522 None:intergenic 55.0%
ACAGGTAGAGACGGACGAGG+TGG - Chr6:86065227-86065246 None:intergenic 60.0%
ATTGTCTTTCCCAGGGGGGG+AGG + Chr6:86064106-86064125 MsG0680034348.01.T01:intron 60.0%
CCGGAACGTGGCCTACTAAG+AGG + Chr6:86064216-86064235 MsG0680034348.01.T01:intron 60.0%
CGAACAGGTAGAGACGGACG+AGG - Chr6:86065230-86065249 None:intergenic 60.0%
GAGCCAGGTTCGAGAACCCA+AGG + Chr6:86064497-86064516 MsG0680034348.01.T01:intron 60.0%
GTAGGCCACGTTCCGGTTCT+CGG - Chr6:86064212-86064231 None:intergenic 60.0%
TAGGCCACGTTCCGGTTCTC+GGG - Chr6:86064211-86064230 None:intergenic 60.0%
TTGTCTTTCCCAGGGGGGGA+GGG + Chr6:86064107-86064126 MsG0680034348.01.T01:intron 60.0%
!! ATCGGGTGGCCATCGACTCA+AGG - Chr6:86067740-86067759 None:intergenic 60.0%
!! TTGATTTGCCCTCCCCCCCT+GGG - Chr6:86064118-86064137 None:intergenic 60.0%
!! TTTGATTTGCCCTCCCCCCC+TGG - Chr6:86064119-86064138 None:intergenic 60.0%
GGTTCCCGAGAACCGGAACG+TGG + Chr6:86064204-86064223 MsG0680034348.01.T01:intron 65.0%
Chromosome Type Strat End Strand Name
Chr6 gene 86061707 86070075 86061707 ID=MsG0680034348.01;Name=MsG0680034348.01
Chr6 mRNA 86061707 86070075 86061707 ID=MsG0680034348.01.T01;Parent=MsG0680034348.01;Name=MsG0680034348.01.T01;_AED=0.21;_eAED=0.21;_QI=0|0|0|0.88|0.75|0.88|9|0|673
Chr6 exon 86061707 86061987 86061707 ID=MsG0680034348.01.T01:exon:18114;Parent=MsG0680034348.01.T01
Chr6 exon 86062259 86062397 86062259 ID=MsG0680034348.01.T01:exon:18115;Parent=MsG0680034348.01.T01
Chr6 exon 86062986 86063234 86062986 ID=MsG0680034348.01.T01:exon:18116;Parent=MsG0680034348.01.T01
Chr6 exon 86064425 86064503 86064425 ID=MsG0680034348.01.T01:exon:18117;Parent=MsG0680034348.01.T01
Chr6 exon 86067586 86067958 86067586 ID=MsG0680034348.01.T01:exon:18118;Parent=MsG0680034348.01.T01
Chr6 exon 86068061 86068279 86068061 ID=MsG0680034348.01.T01:exon:18119;Parent=MsG0680034348.01.T01
Chr6 exon 86068539 86068677 86068539 ID=MsG0680034348.01.T01:exon:18120;Parent=MsG0680034348.01.T01
Chr6 exon 86069422 86069670 86069422 ID=MsG0680034348.01.T01:exon:18121;Parent=MsG0680034348.01.T01
Chr6 exon 86069782 86070075 86069782 ID=MsG0680034348.01.T01:exon:18122;Parent=MsG0680034348.01.T01
Chr6 CDS 86061707 86061987 86061707 ID=MsG0680034348.01.T01:cds;Parent=MsG0680034348.01.T01
Chr6 CDS 86062259 86062397 86062259 ID=MsG0680034348.01.T01:cds;Parent=MsG0680034348.01.T01
Chr6 CDS 86062986 86063234 86062986 ID=MsG0680034348.01.T01:cds;Parent=MsG0680034348.01.T01
Chr6 CDS 86064425 86064503 86064425 ID=MsG0680034348.01.T01:cds;Parent=MsG0680034348.01.T01
Chr6 CDS 86067586 86067958 86067586 ID=MsG0680034348.01.T01:cds;Parent=MsG0680034348.01.T01
Chr6 CDS 86068061 86068279 86068061 ID=MsG0680034348.01.T01:cds;Parent=MsG0680034348.01.T01
Chr6 CDS 86068539 86068677 86068539 ID=MsG0680034348.01.T01:cds;Parent=MsG0680034348.01.T01
Chr6 CDS 86069422 86069670 86069422 ID=MsG0680034348.01.T01:cds;Parent=MsG0680034348.01.T01
Chr6 CDS 86069782 86070075 86069782 ID=MsG0680034348.01.T01:cds;Parent=MsG0680034348.01.T01
Gene Sequence

>MsG0680034348.01.T01

ATGTCTTCAGCAGATTACATCAATCCTAATGAGAAATCGGTTTTGCAAAGAAATGTTGCAGATTTCCACCCTAGCGTTTGGGGAGATTTTTTCATTCCTTATGCACGAAATAGAGTAGTAGAATGTTGCTTTTGGGTTATGACTGTATATTTTGAGCCTCAATATTCTCAAGCAAGGAAAATGATGTCAAAATTTATCTCCGTTTTATCATACATTGATGACACATATGATGCATATGGAACTACTGATGAATTAGAACTTTTTACAAAGGCAATTGAAAGGTGGGATATTAATTGCTTGGAGGATCTTCCGGATTACATGAAGTTGCTTTATAAATCACTCTTGGATGTTTATGAAGAGATAGAGCAAGAAATGAAGAAAGAAGGAAGAGAATACACCCTTGACCCCTTCTTAAAAGAATTCAAAAATATAATCCAAGCTTATATGAGTGAGGCCAGATGGCTGAATGCTAACTATATACCAACAACAGAGGAGTACATGCACATATCAACAATATCAAGTGGTTACCCAGTGTTGGCTACGACTTCTTACATTGGAATGGGAAACATAGCGACAAAAGACATCTTTGATTGGGTAACTAACAATCCAAAAATTGTTAATGTTGCTGCTATACATTGCAGGCTTAGGGATGAAATTGTGTTAAGTGAGGCTACAAGAAATACAGTTGATCAAGTTCAACTCAAGTTTTGGAAAAGTCTGATCAAGTTTGACACAGAAGTTGAGCCAGATGTGTTCAACCAATTCAAGGACGAGCAAGGAAACTTCAGTGAAATATTGGTCGTAGATGTTGAGGGCATGTTAAACTTGTATGAAGCCTCACATATGATGGTTCATGGTGAAAAAATATTGGAAGAGGCTTTGGCTTTTACTTCTGGTCACCTTGAGTCGATGGCCACCCGATTGAGTCGTTCTCTTGCAACCCAAGTAAAACAAAGCTTAAGACAATCTCTCCGCAAAAACTTGCCTAGGCTAGTGTCAAGAAGTTACATTTCCATCTATGAGCAAGATTCATCCCATAATGAAATTCTACTTGCATTGGCAAAATTGGATTTTAATATGCTCCAAAGCCTGCATCAAAAGGAATTTGGAAACATTAGCAAGTGGTGGAACGAGTTGGATATTGCTCAAAAACTACCGTATGCACGAGATAGAGTAGTTGAATGTTGCTTTTGGGTTATGACCGTATATTTTGAGCCCCAATATTCTCAAGCAAGGAAAATGATGTCAAAATTTATCTCCATTTTATCATACATTGATGACACATACGATGCATATGGAACTATTGATGAATTAGAACTTTTTACTAAGGCAATTGAAAGGTGGGATATTAATTGCTTGGAGGATCTTCCGGATTACATGAAGTTGCTTTATAAATCACTCTTGGATGTTTATGAAGAGATAGAGCAAGAAATGAAGAAAGAAGGAAGAGAATACACCCTTGACCCCTTCTTAAAAGAATTCAAAATTATAATCCAAGCTTATATGAGTGAGGCCAGATGGCTGAATGCTAACTATATACCAACAACAGAGGAGTACATGCACATATCAACAATATCAAGTGGTTACCCAGTGTTGGCTACGACTTCTTACATTGGAATGGGAAACATAGCGACAAAAGACATCTTTGATCGGGTAACTAACAATCCAAAAATTGTTAATGCTGCTGCTATACATTGCAGGCTTAGGGATGAAATTGTGTCAAGCGAGTTTGAGCAGAAAAGAGGACATGTTTCTTCGTACTTGGAATGTTATATGAGGGAATATGATTTGAATAGGGAAGCTGCCATTCAAGAATGCCAAAAGAAAATTGACAACGCTTGGAAAGATATAAATCAAGAATGTCTTAAGCCAACTGAAGTTCCGTTACCTATTCTGACGTGTGTTCTCAATCTCTCGCGTTTTATTGAGGTTTTTTATAAAGATACAGATAACTACACACACTCTGACGGACTAATGAAGACATATATTAATGATTTGCTGGTCAATCCTTTAGAAATTTGA
Protein sequence

>MsG0680034348.01.T01

MSSADYINPNEKSVLQRNVADFHPSVWGDFFIPYARNRVVECCFWVMTVYFEPQYSQARKMMSKFISVLSYIDDTYDAYGTTDELELFTKAIERWDINCLEDLPDYMKLLYKSLLDVYEEIEQEMKKEGREYTLDPFLKEFKNIIQAYMSEARWLNANYIPTTEEYMHISTISSGYPVLATTSYIGMGNIATKDIFDWVTNNPKIVNVAAIHCRLRDEIVLSEATRNTVDQVQLKFWKSLIKFDTEVEPDVFNQFKDEQGNFSEILVVDVEGMLNLYEASHMMVHGEKILEEALAFTSGHLESMATRLSRSLATQVKQSLRQSLRKNLPRLVSRSYISIYEQDSSHNEILLALAKLDFNMLQSLHQKEFGNISKWWNELDIAQKLPYARDRVVECCFWVMTVYFEPQYSQARKMMSKFISILSYIDDTYDAYGTIDELELFTKAIERWDINCLEDLPDYMKLLYKSLLDVYEEIEQEMKKEGREYTLDPFLKEFKIIIQAYMSEARWLNANYIPTTEEYMHISTISSGYPVLATTSYIGMGNIATKDIFDRVTNNPKIVNAAAIHCRLRDEIVSSEFEQKRGHVSSYLECYMREYDLNREAAIQECQKKIDNAWKDINQECLKPTEVPLPILTCVLNLSRFIEVFYKDTDNYTHSDGLMKTYINDLLVNPLEI*