Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680034366.01.T01 | XP_004497487.1 | 72.662 | 556 | 152 | 0 | 1 | 556 | 1 | 556 | 0 | 869 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680034366.01.T01 | B9SCB6 | 51.805 | 554 | 263 | 2 | 1 | 554 | 1 | 550 | 0 | 612 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680034366.01.T01 | A0A1S2Y0Q7 | 72.662 | 556 | 152 | 0 | 1 | 556 | 1 | 556 | 0.0 | 869 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0180001008.01 | MsG0680034366.01 | 0.811952 | 5.413078e-51 | 3.396683e-48 |
| MsG0180003484.01 | MsG0680034366.01 | 0.801761 | 7.731977e-49 | 3.722591e-46 |
| MsG0680034293.01 | MsG0680034366.01 | 0.881874 | 1.669061e-70 | 9.944902e-67 |
| MsG0680034295.01 | MsG0680034366.01 | 0.859979 | 2.841941e-63 | 7.647152e-60 |
| MsG0680034298.01 | MsG0680034366.01 | 0.857061 | 2.108634e-62 | 5.138590e-59 |
| MsG0680034306.01 | MsG0680034366.01 | 0.835166 | 1.965697e-56 | 2.384184e-53 |
| MsG0680034307.01 | MsG0680034366.01 | 0.814452 | 1.529330e-51 | 1.026572e-48 |
| MsG0680034310.01 | MsG0680034366.01 | 0.803849 | 2.864663e-49 | 1.454896e-46 |
| MsG0680034312.01 | MsG0680034366.01 | 0.840618 | 7.801221e-58 | 1.117412e-54 |
| MsG0680034321.01 | MsG0680034366.01 | 0.896153 | 4.846336e-76 | 5.179647e-72 |
| MsG0680034325.01 | MsG0680034366.01 | 0.838474 | 2.814423e-57 | 3.773840e-54 |
| MsG0680034326.01 | MsG0680034366.01 | 0.879920 | 8.397579e-70 | 4.638822e-66 |
| MsG0680034328.01 | MsG0680034366.01 | 0.895227 | 1.170723e-75 | 1.203942e-71 |
| MsG0680034329.01 | MsG0680034366.01 | 0.873070 | 1.954015e-67 | 8.367885e-64 |
| MsG0680034330.01 | MsG0680034366.01 | 0.816221 | 6.182481e-52 | 4.355087e-49 |
| MsG0680034332.01 | MsG0680034366.01 | 0.811518 | 6.725269e-51 | 4.171954e-48 |
| MsG0680034348.01 | MsG0680034366.01 | 0.878981 | 1.807457e-69 | 9.632110e-66 |
| MsG0680034351.01 | MsG0680034366.01 | 0.868484 | 6.309660e-66 | 2.286077e-62 |
| MsG0680034352.01 | MsG0680034366.01 | 0.857923 | 1.172185e-62 | 2.940768e-59 |
| MsG0680034354.01 | MsG0680034366.01 | 0.836840 | 7.393346e-57 | 9.430231e-54 |
| MsG0680034356.01 | MsG0680034366.01 | 0.821844 | 3.253617e-53 | 2.677590e-50 |
| MsG0680034357.01 | MsG0680034366.01 | 0.816150 | 6.413552e-52 | 4.509015e-49 |
| MsG0680034366.01 | MsG0680034367.01 | 0.976091 | 3.629641e-141 | 5.917338e-135 |
| MsG0680034366.01 | MsG0680034369.01 | 0.881261 | 2.779719e-70 | 1.617310e-66 |
| MsG0680034366.01 | MsG0680034370.01 | 0.805770 | 1.137136e-49 | 6.067833e-47 |
| MsG0680034366.01 | MsG0780039855.01 | 0.804450 | 2.147304e-49 | 1.107488e-46 |
| MsG0680034366.01 | MsG0780040498.01 | 0.811338 | 7.359821e-51 | 4.543514e-48 |
| MsG0680034366.01 | MsG0880043217.01 | 0.812589 | 3.928589e-51 | 2.507871e-48 |
| MsG0680034366.01 | MsG0880043906.01 | 0.801695 | 7.976545e-49 | 3.833891e-46 |
| MsG0680034366.01 | MsG0880046271.01 | 0.804953 | 1.686717e-49 | 8.813544e-47 |
| MsG0480020904.01 | MsG0680034366.01 | 0.811680 | 6.201489e-51 | 3.863099e-48 |
| MsG0480021129.01 | MsG0680034366.01 | 0.801871 | 7.339006e-49 | 3.543603e-46 |
| MsG0480021133.01 | MsG0680034366.01 | 0.800617 | 1.325053e-48 | 6.197911e-46 |
| MsG0480021360.01 | MsG0680034366.01 | 0.803687 | 3.095174e-49 | 1.565368e-46 |
| MsG0480022055.01 | MsG0680034366.01 | 0.820745 | 5.830763e-53 | 4.652895e-50 |
| MsG0580025590.01 | MsG0680034366.01 | 0.806654 | 7.405918e-50 | 4.041733e-47 |
| MsG0380015323.01 | MsG0680034366.01 | 0.803082 | 4.131711e-49 | 2.057261e-46 |
| MsG0380016299.01 | MsG0680034366.01 | 0.824705 | 6.982116e-54 | 6.233122e-51 |
| MsG0380016300.01 | MsG0680034366.01 | 0.817377 | 3.403296e-52 | 2.474420e-49 |
| MsG0280009232.01 | MsG0680034366.01 | 0.811564 | 6.573347e-51 | 4.082531e-48 |
PPI
| Gene1 | Gene2 | Type |
|---|---|---|
| MsG0880044118.01 | MsG0680034366.01 | PPI |
| MsG0680034366.01 | MsG0280009520.01 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680034366.01.T01 | MTR_5g062230 | 68.345 | 556 | 173 | 1 | 1 | 556 | 1 | 553 | 0.0 | 801 |
| MsG0680034366.01.T01 | MTR_6g039440 | 68.165 | 556 | 174 | 1 | 1 | 556 | 1 | 553 | 0.0 | 799 |
| MsG0680034366.01.T01 | MTR_6g008560 | 66.966 | 557 | 183 | 1 | 1 | 556 | 1 | 557 | 0.0 | 796 |
| MsG0680034366.01.T01 | MTR_3g464190 | 66.607 | 557 | 185 | 1 | 1 | 556 | 1 | 557 | 0.0 | 782 |
| MsG0680034366.01.T01 | MTR_4g048460 | 66.849 | 549 | 182 | 0 | 8 | 556 | 13 | 561 | 0.0 | 771 |
| MsG0680034366.01.T01 | MTR_5g073200 | 66.912 | 544 | 179 | 1 | 12 | 554 | 4 | 547 | 0.0 | 753 |
| MsG0680034366.01.T01 | MTR_5g073260 | 65.385 | 546 | 187 | 2 | 13 | 556 | 7 | 552 | 0.0 | 744 |
| MsG0680034366.01.T01 | MTR_5g094620 | 63.669 | 556 | 183 | 1 | 1 | 556 | 1 | 537 | 0.0 | 743 |
| MsG0680034366.01.T01 | MTR_4g081460 | 58.182 | 550 | 227 | 2 | 9 | 556 | 14 | 562 | 0.0 | 673 |
| MsG0680034366.01.T01 | MTR_4g048460 | 66.004 | 453 | 154 | 0 | 7 | 459 | 12 | 464 | 0.0 | 624 |
| MsG0680034366.01.T01 | MTR_6g008560 | 66.085 | 401 | 136 | 0 | 156 | 556 | 1 | 401 | 0.0 | 574 |
| MsG0680034366.01.T01 | MTR_2g082010 | 44.161 | 548 | 300 | 6 | 13 | 556 | 23 | 568 | 2.67e-173 | 502 |
| MsG0680034366.01.T01 | MTR_2g081980 | 44.891 | 548 | 294 | 8 | 15 | 556 | 12 | 557 | 1.47e-171 | 498 |
| MsG0680034366.01.T01 | MTR_8g007515 | 44.909 | 550 | 295 | 6 | 13 | 556 | 9 | 556 | 3.54e-170 | 494 |
| MsG0680034366.01.T01 | MTR_2g082060 | 41.489 | 564 | 309 | 9 | 1 | 556 | 3 | 553 | 1.52e-157 | 461 |
| MsG0680034366.01.T01 | MTR_4g019550 | 40.868 | 553 | 303 | 8 | 15 | 556 | 19 | 558 | 1.24e-143 | 426 |
| MsG0680034366.01.T01 | MTR_2g082050 | 38.252 | 515 | 257 | 9 | 43 | 554 | 1 | 457 | 2.19e-122 | 368 |
| MsG0680034366.01.T01 | MTR_4g045810 | 34.615 | 546 | 346 | 4 | 13 | 554 | 41 | 579 | 2.18e-114 | 352 |
| MsG0680034366.01.T01 | MTR_2g064425 | 36.716 | 542 | 329 | 9 | 17 | 554 | 53 | 584 | 2.30e-105 | 328 |
| MsG0680034366.01.T01 | MTR_2g089130 | 34.545 | 495 | 308 | 5 | 44 | 534 | 62 | 544 | 1.07e-102 | 321 |
| MsG0680034366.01.T01 | MTR_2g089120 | 34.623 | 491 | 304 | 6 | 49 | 534 | 67 | 545 | 3.37e-101 | 317 |
| MsG0680034366.01.T01 | MTR_8g057020 | 33.090 | 547 | 357 | 6 | 10 | 554 | 48 | 587 | 1.89e-97 | 308 |
| MsG0680034366.01.T01 | MTR_2g064425 | 35.055 | 542 | 323 | 10 | 17 | 554 | 53 | 569 | 5.33e-95 | 301 |
| MsG0680034366.01.T01 | MTR_2g065450 | 32.482 | 548 | 357 | 7 | 10 | 554 | 51 | 588 | 1.84e-92 | 295 |
| MsG0680034366.01.T01 | MTR_4g092020 | 33.598 | 503 | 325 | 5 | 56 | 554 | 72 | 569 | 1.34e-88 | 284 |
| MsG0680034366.01.T01 | MTR_2g064425 | 42.975 | 363 | 195 | 7 | 17 | 376 | 53 | 406 | 1.06e-85 | 273 |
| MsG0680034366.01.T01 | MTR_7g010710 | 30.521 | 557 | 378 | 6 | 1 | 553 | 1 | 552 | 3.96e-85 | 275 |
| MsG0680034366.01.T01 | MTR_7g057340 | 66.860 | 172 | 57 | 0 | 385 | 556 | 1 | 172 | 4.87e-84 | 259 |
| MsG0680034366.01.T01 | MTR_4g092010 | 30.876 | 502 | 333 | 7 | 55 | 548 | 61 | 556 | 1.32e-80 | 263 |
| MsG0680034366.01.T01 | MTR_7g057390 | 64.535 | 172 | 58 | 1 | 385 | 556 | 1 | 169 | 1.52e-77 | 242 |
| MsG0680034366.01.T01 | MTR_2g064425 | 40.496 | 363 | 189 | 8 | 17 | 376 | 53 | 391 | 1.43e-75 | 246 |
| MsG0680034366.01.T01 | MTR_5g094530 | 57.078 | 219 | 56 | 4 | 166 | 381 | 1 | 184 | 9.78e-75 | 235 |
| MsG0680034366.01.T01 | MTR_2g010960 | 28.958 | 518 | 343 | 8 | 47 | 547 | 9 | 518 | 3.86e-72 | 239 |
| MsG0680034366.01.T01 | MTR_6g064980 | 29.697 | 495 | 335 | 8 | 54 | 539 | 13 | 503 | 1.92e-68 | 230 |
| MsG0680034366.01.T01 | MTR_3g465090 | 29.774 | 487 | 335 | 6 | 54 | 534 | 13 | 498 | 2.71e-68 | 229 |
| MsG0680034366.01.T01 | MTR_3g063170 | 29.485 | 485 | 329 | 8 | 54 | 529 | 13 | 493 | 1.18e-67 | 228 |
| MsG0680034366.01.T01 | MTR_3g063120 | 28.513 | 491 | 340 | 8 | 68 | 550 | 1 | 488 | 5.60e-66 | 223 |
| MsG0680034366.01.T01 | MTR_3g052120 | 29.365 | 504 | 345 | 9 | 54 | 550 | 13 | 512 | 3.49e-65 | 221 |
| MsG0680034366.01.T01 | MTR_3g063140 | 28.980 | 490 | 335 | 8 | 54 | 534 | 13 | 498 | 1.54e-64 | 219 |
| MsG0680034366.01.T01 | MTR_7g050990 | 59.639 | 166 | 56 | 2 | 199 | 364 | 27 | 181 | 2.64e-56 | 204 |
| MsG0680034366.01.T01 | MTR_6g065040 | 29.008 | 393 | 268 | 6 | 145 | 529 | 2 | 391 | 2.01e-54 | 189 |
| MsG0680034366.01.T01 | MTR_3g015080 | 48.256 | 172 | 51 | 2 | 385 | 556 | 1 | 134 | 9.16e-47 | 160 |
| MsG0680034366.01.T01 | MTR_3g058160 | 25.577 | 520 | 337 | 15 | 70 | 554 | 65 | 569 | 2.29e-37 | 146 |
| MsG0680034366.01.T01 | MTR_3g058160 | 25.577 | 520 | 337 | 15 | 70 | 554 | 256 | 760 | 5.22e-37 | 146 |
| MsG0680034366.01.T01 | MTR_3g058160 | 25.577 | 520 | 337 | 15 | 70 | 554 | 269 | 773 | 5.94e-37 | 146 |
| MsG0680034366.01.T01 | MTR_3g058160 | 25.577 | 520 | 337 | 15 | 70 | 554 | 276 | 780 | 6.40e-37 | 146 |
| MsG0680034366.01.T01 | MTR_3g063160 | 31.655 | 278 | 185 | 5 | 54 | 328 | 13 | 288 | 6.70e-36 | 136 |
| MsG0680034366.01.T01 | MTR_2g064295 | 24.330 | 522 | 341 | 16 | 70 | 554 | 256 | 760 | 2.12e-35 | 142 |
| MsG0680034366.01.T01 | MTR_3g058160 | 24.954 | 541 | 335 | 16 | 70 | 554 | 276 | 801 | 2.81e-34 | 138 |
| MsG0680034366.01.T01 | MTR_2g012870 | 23.397 | 577 | 394 | 18 | 10 | 554 | 194 | 754 | 2.19e-31 | 129 |
| MsG0680034366.01.T01 | MTR_2g012900 | 24.324 | 518 | 339 | 18 | 10 | 486 | 194 | 699 | 3.63e-30 | 126 |
| MsG0680034366.01.T01 | MTR_7g011663 | 29.927 | 274 | 160 | 6 | 68 | 310 | 344 | 616 | 7.14e-24 | 106 |
| MsG0680034366.01.T01 | MTR_7g094970 | 27.273 | 275 | 168 | 6 | 68 | 313 | 206 | 477 | 1.19e-23 | 105 |
| MsG0680034366.01.T01 | MTR_5g030050 | 28.409 | 264 | 156 | 7 | 73 | 312 | 3 | 257 | 5.34e-21 | 94.4 |
| MsG0680034366.01.T01 | MTR_7g011770 | 28.669 | 293 | 180 | 7 | 68 | 332 | 240 | 531 | 5.85e-21 | 97.4 |
| MsG0680034366.01.T01 | MTR_5g081730 | 35.455 | 110 | 66 | 1 | 153 | 257 | 2 | 111 | 9.85e-12 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680034366.01.T01 | AT5G23960 | 39.383 | 551 | 319 | 7 | 13 | 556 | 3 | 545 | 4.75e-144 | 427 |
| MsG0680034366.01.T01 | AT5G23960 | 39.350 | 554 | 317 | 9 | 13 | 556 | 3 | 547 | 7.42e-143 | 424 |
| MsG0680034366.01.T01 | AT1G70080 | 37.163 | 557 | 340 | 7 | 8 | 556 | 57 | 611 | 1.02e-130 | 395 |
| MsG0680034366.01.T01 | AT3G14490 | 37.729 | 546 | 330 | 5 | 17 | 556 | 60 | 601 | 6.19e-127 | 385 |
| MsG0680034366.01.T01 | AT3G14520 | 36.229 | 541 | 335 | 5 | 22 | 556 | 68 | 604 | 1.61e-124 | 379 |
| MsG0680034366.01.T01 | AT1G31950 | 35.949 | 548 | 328 | 6 | 22 | 556 | 70 | 607 | 1.82e-123 | 376 |
| MsG0680034366.01.T01 | AT1G31950 | 36.414 | 541 | 334 | 5 | 22 | 556 | 70 | 606 | 3.26e-123 | 375 |
| MsG0680034366.01.T01 | AT3G14540 | 36.481 | 540 | 335 | 4 | 22 | 556 | 65 | 601 | 2.64e-122 | 373 |
| MsG0680034366.01.T01 | AT3G29410 | 35.466 | 547 | 339 | 5 | 17 | 556 | 64 | 603 | 6.55e-118 | 362 |
| MsG0680034366.01.T01 | AT5G44630 | 35.584 | 548 | 336 | 8 | 18 | 554 | 14 | 555 | 7.49e-116 | 355 |
| MsG0680034366.01.T01 | AT3G32030 | 33.571 | 560 | 358 | 7 | 2 | 556 | 54 | 604 | 3.83e-115 | 354 |
| MsG0680034366.01.T01 | AT1G33750 | 34.579 | 535 | 344 | 4 | 24 | 556 | 73 | 603 | 4.43e-114 | 352 |
| MsG0680034366.01.T01 | AT4G20210 | 34.124 | 548 | 348 | 7 | 17 | 556 | 58 | 600 | 1.28e-113 | 350 |
| MsG0680034366.01.T01 | AT3G29410 | 35.800 | 500 | 317 | 3 | 59 | 556 | 1 | 498 | 4.69e-112 | 343 |
| MsG0680034366.01.T01 | AT4G20200 | 35.521 | 518 | 320 | 8 | 48 | 556 | 92 | 604 | 5.48e-112 | 346 |
| MsG0680034366.01.T01 | AT4G13300 | 34.879 | 539 | 340 | 7 | 25 | 556 | 20 | 554 | 7.86e-112 | 344 |
| MsG0680034366.01.T01 | AT4G13280 | 34.264 | 537 | 342 | 7 | 27 | 556 | 22 | 554 | 1.31e-106 | 331 |
| MsG0680034366.01.T01 | AT4G15870 | 34.750 | 541 | 327 | 10 | 25 | 556 | 75 | 598 | 1.42e-106 | 332 |
| MsG0680034366.01.T01 | AT3G29190 | 33.333 | 519 | 330 | 7 | 48 | 556 | 89 | 601 | 2.97e-105 | 328 |
| MsG0680034366.01.T01 | AT1G31950 | 36.933 | 463 | 269 | 6 | 22 | 471 | 70 | 522 | 4.24e-105 | 326 |
| MsG0680034366.01.T01 | AT3G14540 | 37.892 | 446 | 270 | 3 | 22 | 463 | 65 | 507 | 6.43e-105 | 325 |
| MsG0680034366.01.T01 | AT4G20230 | 33.852 | 514 | 327 | 7 | 48 | 552 | 92 | 601 | 1.58e-103 | 324 |
| MsG0680034366.01.T01 | AT4G20230 | 33.852 | 514 | 327 | 7 | 48 | 552 | 104 | 613 | 1.85e-103 | 325 |
| MsG0680034366.01.T01 | AT2G23230 | 34.249 | 546 | 344 | 9 | 16 | 551 | 55 | 595 | 1.15e-101 | 320 |
| MsG0680034366.01.T01 | AT3G29110 | 34.191 | 544 | 349 | 8 | 17 | 554 | 55 | 595 | 7.37e-101 | 317 |
| MsG0680034366.01.T01 | AT2G23230 | 34.066 | 546 | 340 | 10 | 16 | 551 | 55 | 590 | 3.77e-99 | 313 |
| MsG0680034366.01.T01 | AT1G66020 | 32.418 | 546 | 360 | 6 | 17 | 556 | 56 | 598 | 9.33e-98 | 309 |
| MsG0680034366.01.T01 | AT1G48800 | 32.601 | 546 | 352 | 9 | 17 | 552 | 63 | 602 | 5.87e-96 | 305 |
| MsG0680034366.01.T01 | AT4G16730 | 32.228 | 543 | 345 | 10 | 28 | 554 | 2 | 537 | 3.06e-95 | 301 |
| MsG0680034366.01.T01 | AT4G13280 | 33.333 | 537 | 317 | 9 | 27 | 556 | 22 | 524 | 8.65e-95 | 299 |
| MsG0680034366.01.T01 | AT4G16730 | 32.665 | 499 | 315 | 8 | 73 | 556 | 1 | 493 | 4.00e-92 | 291 |
| MsG0680034366.01.T01 | AT4G16740 | 31.835 | 556 | 352 | 13 | 14 | 556 | 23 | 564 | 1.32e-88 | 284 |
| MsG0680034366.01.T01 | AT1G61680 | 32.465 | 499 | 325 | 4 | 54 | 546 | 77 | 569 | 2.53e-88 | 283 |
| MsG0680034366.01.T01 | AT2G24210 | 31.429 | 560 | 363 | 11 | 10 | 556 | 39 | 590 | 1.50e-87 | 282 |
| MsG0680034366.01.T01 | AT1G61680 | 32.064 | 499 | 320 | 5 | 54 | 546 | 77 | 562 | 6.16e-85 | 275 |
| MsG0680034366.01.T01 | AT5G48110 | 37.318 | 343 | 210 | 5 | 215 | 556 | 1 | 339 | 4.45e-84 | 265 |
| MsG0680034366.01.T01 | AT1G48820 | 31.354 | 539 | 320 | 11 | 17 | 549 | 63 | 557 | 1.42e-83 | 271 |
| MsG0680034366.01.T01 | AT3G25830 | 30.357 | 560 | 362 | 13 | 15 | 556 | 45 | 594 | 9.06e-81 | 265 |
| MsG0680034366.01.T01 | AT3G25820 | 30.357 | 560 | 362 | 13 | 15 | 556 | 45 | 594 | 9.06e-81 | 265 |
| MsG0680034366.01.T01 | AT3G25810 | 30.536 | 560 | 364 | 11 | 15 | 556 | 45 | 597 | 2.47e-79 | 261 |
| MsG0680034366.01.T01 | AT4G16740 | 34.565 | 379 | 227 | 8 | 14 | 381 | 23 | 391 | 6.67e-69 | 228 |
| MsG0680034366.01.T01 | AT1G66020 | 34.688 | 369 | 232 | 6 | 17 | 379 | 56 | 421 | 3.14e-67 | 224 |
| MsG0680034366.01.T01 | AT3G25820 | 32.558 | 387 | 240 | 9 | 15 | 389 | 45 | 422 | 3.72e-62 | 211 |
| MsG0680034366.01.T01 | AT4G16740 | 34.756 | 328 | 194 | 7 | 14 | 330 | 23 | 341 | 1.61e-58 | 199 |
| MsG0680034366.01.T01 | AT4G16740 | 34.756 | 328 | 194 | 7 | 14 | 330 | 23 | 341 | 1.61e-58 | 199 |
| MsG0680034366.01.T01 | AT3G25820 | 33.333 | 327 | 199 | 7 | 15 | 330 | 45 | 363 | 1.89e-54 | 189 |
| MsG0680034366.01.T01 | AT3G25820 | 33.333 | 327 | 199 | 7 | 15 | 330 | 45 | 363 | 1.89e-54 | 189 |
| MsG0680034366.01.T01 | AT1G79460 | 24.905 | 526 | 336 | 20 | 70 | 556 | 274 | 779 | 5.46e-32 | 131 |
| MsG0680034366.01.T01 | AT1G61120 | 23.576 | 509 | 359 | 10 | 68 | 556 | 286 | 784 | 2.17e-27 | 117 |
| MsG0680034366.01.T01 | AT4G02780 | 29.119 | 261 | 155 | 6 | 68 | 300 | 329 | 587 | 1.44e-22 | 102 |
Find 92 sgRNAs with CRISPR-Local
Find 174 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTCTCTTGCTGTGCTATTT+AGG | 0.103456 | 6:+86368471 | MsG0680034366.01.T01:CDS |
| TCTACTTGCATTGGCAAAAT+TGG | 0.119753 | 6:+86369405 | MsG0680034366.01.T01:CDS |
| TTCTCTTGCTGTGCTATTTA+GGG | 0.189824 | 6:+86368472 | MsG0680034366.01.T01:CDS |
| TTTCCTTGCTTGAGAATATT+GGG | 0.241792 | 6:-86369678 | None:intergenic |
| ATGCAAGTAGAATTTCATTA+TGG | 0.248221 | 6:-86369393 | None:intergenic |
| AGCCTACATCAAAAGGAATT+TGG | 0.257080 | 6:+86369445 | MsG0680034366.01.T01:CDS |
| TACAAGAGTTATGTTCAAAA+TGG | 0.269625 | 6:+86368422 | MsG0680034366.01.T01:CDS |
| TAAAGCAACTTCGTGTAATC+TGG | 0.272262 | 6:-86370100 | None:intergenic |
| TCCTTATGCTTCAGAATCTA+TGG | 0.272455 | 6:+86367956 | MsG0680034366.01.T01:CDS |
| CTGCTATACATTGCAGGCTT+AGG | 0.276774 | 6:+86371161 | MsG0680034366.01.T01:CDS |
| AGACGAAATTAATCAAGTTT+TGG | 0.301364 | 6:+86368391 | MsG0680034366.01.T01:CDS |
| GTCATCAATGTATGATAAAA+TGG | 0.310334 | 6:-86369720 | None:intergenic |
| CAGATTTCCACCCTAGCGTT+TGG | 0.311610 | 6:+86367919 | MsG0680034366.01.T01:CDS |
| AGATTTCCACCCTAGCGTTT+GGG | 0.325288 | 6:+86367920 | MsG0680034366.01.T01:CDS |
| TGCAAAACCGATTTCTCATT+AGG | 0.335406 | 6:-86367885 | None:intergenic |
| TGAGGGAATATGATTTGAAT+AGG | 0.340079 | 6:+86371363 | MsG0680034366.01.T01:CDS |
| TTCCTTGCTCGTCCTTGAAT+TGG | 0.345275 | 6:-86369117 | None:intergenic |
| GAGTAGTAGAATGTTGCTTT+TGG | 0.347068 | 6:+86369633 | MsG0680034366.01.T01:CDS |
| ATGCTGCTGCTATACATTGC+AGG | 0.354080 | 6:+86371155 | MsG0680034366.01.T01:CDS |
| TGTGCCGCAGTATTCATATC+AGG | 0.354426 | 6:-86368251 | None:intergenic |
| CATCAATCCTAATGAGAAAT+CGG | 0.381109 | 6:+86367878 | MsG0680034366.01.T01:CDS |
| TGCAAGTAGAATTTCATTAT+GGG | 0.387262 | 6:-86369392 | None:intergenic |
| CGTACTTGGAATGTTATATG+AGG | 0.388936 | 6:+86371345 | MsG0680034366.01.T01:CDS |
| GGATGAATCTTGCTCATAGA+TGG | 0.390050 | 6:-86369371 | None:intergenic |
| GATTGACTCAATATGTCGTT+TGG | 0.390339 | 6:+86368349 | MsG0680034366.01.T01:CDS |
| AGGACACGTTTCTTCGTACT+TGG | 0.392720 | 6:+86371331 | MsG0680034366.01.T01:CDS |
| GTTGCTTTATAAATCACTCT+TGG | 0.404999 | 6:+86370114 | MsG0680034366.01.T01:CDS |
| AATAAATACTCAAATTTCTA+CGG | 0.417455 | 6:-86371597 | None:intergenic |
| TGCATGTACTCCTCTGTTGT+TGG | 0.418606 | 6:-86371016 | None:intergenic |
| AAAAGAAAATTGACAACGCT+TGG | 0.444020 | 6:+86371408 | MsG0680034366.01.T01:CDS |
| TTCTGGTCACCTTGAGTCCA+TGG | 0.446304 | 6:+86369249 | MsG0680034366.01.T01:CDS |
| TGCTATACATTGCAGGCTTA+GGG | 0.448464 | 6:+86371162 | MsG0680034366.01.T01:CDS |
| GCTCCAAAGCCTACATCAAA+AGG | 0.450495 | 6:+86369438 | MsG0680034366.01.T01:CDS |
| TAGGTGGGATATTAATTGCT+TGG | 0.452782 | 6:+86370069 | MsG0680034366.01.T01:intron |
| TACGACTTCTTACATTGGAA+TGG | 0.454510 | 6:+86371075 | MsG0680034366.01.T01:CDS |
| ATAGTTAGCATTCAGCCATC+TGG | 0.458951 | 6:-86370990 | None:intergenic |
| TAATGAAATTCTACTTGCAT+TGG | 0.460272 | 6:+86369396 | MsG0680034366.01.T01:CDS |
| ACGACTTCTTACATTGGAAT+GGG | 0.460983 | 6:+86371076 | MsG0680034366.01.T01:CDS |
| GATGACACATATGATGCATA+TGG | 0.467097 | 6:+86369737 | MsG0680034366.01.T01:CDS |
| GAGCAAGAAATGAAGAAAGA+AGG | 0.470516 | 6:+86370154 | MsG0680034366.01.T01:CDS |
| ATTGACTCAATATGTCGTTT+GGG | 0.473862 | 6:+86368350 | MsG0680034366.01.T01:CDS |
| GAGGGAATATGATTTGAATA+GGG | 0.475500 | 6:+86371364 | MsG0680034366.01.T01:CDS |
| ATAAATACTCAAATTTCTAC+GGG | 0.477038 | 6:-86371596 | None:intergenic |
| TTGCAAGAGAAGGACTCAAT+CGG | 0.484754 | 6:-86369276 | None:intergenic |
| CGCTTGGAAAGATATAAATC+AGG | 0.490061 | 6:+86371424 | MsG0680034366.01.T01:CDS |
| TTGAGAACACACGTAAGAAT+AGG | 0.491590 | 6:-86371476 | None:intergenic |
| CTGTGCTATTTAGGGTGTTG+AGG | 0.502767 | 6:+86368480 | MsG0680034366.01.T01:CDS |
| CATGGACTTTACGTTTCACC+TGG | 0.512238 | 6:+86368506 | MsG0680034366.01.T01:CDS |
| AGGACTCAATCGGGTGGCCA+TGG | 0.512884 | 6:-86369266 | None:intergenic |
| AGATGTGTTCAACCAATTCA+AGG | 0.513117 | 6:+86369105 | MsG0680034366.01.T01:intron |
| ACCATAGATTCTGAAGCATA+AGG | 0.518574 | 6:-86367957 | None:intergenic |
| CGACAAAAGACATCTTTGAC+TGG | 0.519009 | 6:+86371107 | MsG0680034366.01.T01:CDS |
| TAACTTCTTGCCACTAGCCT+AGG | 0.521919 | 6:-86369343 | None:intergenic |
| GCCTCACATATGATGGTTCA+TGG | 0.522278 | 6:+86369193 | MsG0680034366.01.T01:CDS |
| TAAGAAGTCGTAGCCAACAC+TGG | 0.522936 | 6:-86371064 | None:intergenic |
| ATATAGGTGGTGGAAGGAGT+TGG | 0.524102 | 6:+86369577 | MsG0680034366.01.T01:intron |
| ATATTGGGGCTCAAAATAAA+CGG | 0.524279 | 6:-86369663 | None:intergenic |
| GTGGGATATTAATTGCTTGG+AGG | 0.529634 | 6:+86370072 | MsG0680034366.01.T01:CDS |
| ATAGGTAACGGAACTTCAGT+TGG | 0.529746 | 6:-86371458 | None:intergenic |
| TGGCCTCACTCATATAAGCT+TGG | 0.531321 | 6:-86370970 | None:intergenic |
| AACATTGGTCAGAGATGTTG+AGG | 0.533818 | 6:+86369150 | MsG0680034366.01.T01:CDS |
| TTCCTTGCTTGAGAATATTG+GGG | 0.534381 | 6:-86369677 | None:intergenic |
| AAACAGTTTGAGCAGAAAAG+AGG | 0.539017 | 6:+86371311 | MsG0680034366.01.T01:intron |
| TGCAAGAGAAGGACTCAATC+GGG | 0.546913 | 6:-86369275 | None:intergenic |
| AGCCCCAATATTCTCAAGCA+AGG | 0.547455 | 6:+86369675 | MsG0680034366.01.T01:CDS |
| CTTATATGAGTGAGGCCAGA+TGG | 0.549142 | 6:+86370975 | MsG0680034366.01.T01:CDS |
| TTTAGGGTGTTGAGGCAACA+TGG | 0.552007 | 6:+86368488 | MsG0680034366.01.T01:CDS |
| TTTACTTGTGTTGCAAGAGA+AGG | 0.558925 | 6:-86369286 | None:intergenic |
| ATCGGGTGGCCATGGACTCA+AGG | 0.566605 | 6:-86369258 | None:intergenic |
| GTACTTGGAATGTTATATGA+GGG | 0.567173 | 6:+86371346 | MsG0680034366.01.T01:CDS |
| GTATGAAGCCTCACATATGA+TGG | 0.567934 | 6:+86369186 | MsG0680034366.01.T01:CDS |
| ATCAAGTGGTTACCCAGTGT+TGG | 0.570889 | 6:+86371051 | MsG0680034366.01.T01:CDS |
| ATAGCACAGCAAGAGAATGA+AGG | 0.572946 | 6:-86368466 | None:intergenic |
| AGGAAACTTCAGTGAAACAT+TGG | 0.576091 | 6:+86369135 | MsG0680034366.01.T01:CDS |
| TTGGCTACGACTTCTTACAT+TGG | 0.586299 | 6:+86371070 | MsG0680034366.01.T01:CDS |
| CTTTATATATAGGTGGTGGA+AGG | 0.588928 | 6:+86369571 | MsG0680034366.01.T01:intron |
| ACTACTCTATCTCGTGCATA+CGG | 0.590301 | 6:-86369617 | None:intergenic |
| CACATATCAACAATATCAAG+TGG | 0.594145 | 6:+86371037 | MsG0680034366.01.T01:CDS |
| GATTTCCACCCTAGCGTTTG+GGG | 0.596026 | 6:+86367921 | MsG0680034366.01.T01:CDS |
| AATCTCCCCAAACGCTAGGG+TGG | 0.601357 | 6:-86367926 | None:intergenic |
| GATAACTACACACACTCTGA+CGG | 0.610210 | 6:+86371536 | MsG0680034366.01.T01:CDS |
| AAGAAGTCGTAGCCAACACT+GGG | 0.613680 | 6:-86371063 | None:intergenic |
| AACCAATTCAAGGACGAGCA+AGG | 0.615624 | 6:+86369115 | MsG0680034366.01.T01:CDS |
| GACAAAAGACATCTTTGACT+GGG | 0.626667 | 6:+86371108 | MsG0680034366.01.T01:CDS |
| ACCATGAACCATCATATGTG+AGG | 0.634158 | 6:-86369194 | None:intergenic |
| AATCCAAGCTTATATGAGTG+AGG | 0.644710 | 6:+86370967 | MsG0680034366.01.T01:CDS |
| ACATTGGTCAGAGATGTTGA+GGG | 0.666287 | 6:+86369151 | MsG0680034366.01.T01:CDS |
| GGATGAAATTGTGTCAAGCG+AGG | 0.675331 | 6:+86371183 | MsG0680034366.01.T01:CDS |
| ACACACGTAAGAATAGGTAA+CGG | 0.686084 | 6:-86371470 | None:intergenic |
| AAGAGAAGGACTCAATCGGG+TGG | 0.695745 | 6:-86369272 | None:intergenic |
| GGAACCTGATATGAATACTG+CGG | 0.696636 | 6:+86368247 | MsG0680034366.01.T01:intron |
| TAACTATATACCAACAACAG+AGG | 0.703519 | 6:+86371006 | MsG0680034366.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATATAAAATAAACGTTAAT+AGG | - | Chr6:86370921-86370940 | None:intergenic | 10.0% |
| !! | TGATTATAAACTAATATTAA+TGG | + | Chr6:86368902-86368921 | MsG0680034366.01.T01:intron | 10.0% |
| !!! | TATTTTTTGTCTTTATATAT+AGG | + | Chr6:86369561-86369580 | MsG0680034366.01.T01:intron | 10.0% |
| !! | AATTGATAAACTAAAAAAGA+AGG | + | Chr6:86368274-86368293 | MsG0680034366.01.T01:CDS | 15.0% |
| !! | ATAAAGACAAAAAATAGTAT+AGG | - | Chr6:86369557-86369576 | None:intergenic | 15.0% |
| !! | ATGAGTAAATAAATAGTATA+AGG | - | Chr6:86368109-86368128 | None:intergenic | 15.0% |
| !! | TAATATGAATGTCTAAAAAA+TGG | + | Chr6:86368668-86368687 | MsG0680034366.01.T01:intron | 15.0% |
| !! | TTAACAACATTTAATTACAT+AGG | + | Chr6:86370879-86370898 | MsG0680034366.01.T01:intron | 15.0% |
| !! | TTGTAGAATTAATATTACAA+AGG | - | Chr6:86370796-86370815 | None:intergenic | 15.0% |
| !! | TTTATTAAAACAAATTAGAG+TGG | + | Chr6:86368567-86368586 | MsG0680034366.01.T01:intron | 15.0% |
| !!! | AAACATTTTTACATCATTTT+AGG | + | Chr6:86370414-86370433 | MsG0680034366.01.T01:intron | 15.0% |
| !!! | ATACTTTTATATTTTGATGT+AGG | - | Chr6:86369499-86369518 | None:intergenic | 15.0% |
| !!! | ATTGTTGTTTAATATTATTG+TGG | + | Chr6:86369064-86369083 | MsG0680034366.01.T01:intron | 15.0% |
| !!! | ATTTCATTTTAAACTTTGTA+TGG | + | Chr6:86370313-86370332 | MsG0680034366.01.T01:intron | 15.0% |
| !!! | TATATTGACATTTTAATTAG+TGG | + | Chr6:86370822-86370841 | MsG0680034366.01.T01:intron | 15.0% |
| !!! | TTTAATTACATAGGTTTTTT+TGG | + | Chr6:86370888-86370907 | MsG0680034366.01.T01:intron | 15.0% |
| !! | AAGACACTTAATTATTGTTA+TGG | - | Chr6:86368182-86368201 | None:intergenic | 20.0% |
| !! | AATATTAATGGTATACATGT+AGG | + | Chr6:86368914-86368933 | MsG0680034366.01.T01:intron | 20.0% |
| !! | GAGAATAATTAAAAGAAATG+AGG | - | Chr6:86368844-86368863 | None:intergenic | 20.0% |
| !! | TGTAAAAAACTTATTATCCA+TGG | + | Chr6:86370553-86370572 | MsG0680034366.01.T01:intron | 20.0% |
| !!! | AATCAAAATGATTTTTAGGT+GGG | + | Chr6:86370054-86370073 | MsG0680034366.01.T01:intron | 20.0% |
| !!! | ATTGTTTTATCTCTAAAGTT+TGG | - | Chr6:86369852-86369871 | None:intergenic | 20.0% |
| !!! | CTTTTTACTAAAAGATTTAC+AGG | - | Chr6:86368708-86368727 | None:intergenic | 20.0% |
| !!! | TATATGTTTTGAATACATAC+AGG | + | Chr6:86368226-86368245 | MsG0680034366.01.T01:intron | 20.0% |
| !!! | TTGCAATCAAAATGATTTTT+AGG | + | Chr6:86370050-86370069 | MsG0680034366.01.T01:intron | 20.0% |
| !!! | TTTTTGTCTTTATATATAGG+TGG | + | Chr6:86369564-86369583 | MsG0680034366.01.T01:intron | 20.0% |
| ! | AAACTTTGTATGGTTATCAA+AGG | + | Chr6:86370323-86370342 | MsG0680034366.01.T01:intron | 25.0% |
| ! | AACTTTGTATGGTTATCAAA+GGG | + | Chr6:86370324-86370343 | MsG0680034366.01.T01:intron | 25.0% |
| ! | AAGAAAAATGTATCATCATG+AGG | + | Chr6:86370629-86370648 | MsG0680034366.01.T01:intron | 25.0% |
| ! | ATGAAATCTTTGTTCAATTG+TGG | - | Chr6:86370300-86370319 | None:intergenic | 25.0% |
| ! | ATGCAAGTAGAATTTCATTA+TGG | - | Chr6:86369396-86369415 | None:intergenic | 25.0% |
| ! | GTCATCAATGTATGATAAAA+TGG | - | Chr6:86369723-86369742 | None:intergenic | 25.0% |
| ! | TAATGAAATTCTACTTGCAT+TGG | + | Chr6:86369396-86369415 | MsG0680034366.01.T01:CDS | 25.0% |
| ! | TACAAGAGTTATGTTCAAAA+TGG | + | Chr6:86368422-86368441 | MsG0680034366.01.T01:CDS | 25.0% |
| ! | TGCAAAAAACTTATTATCCA+TGG | + | Chr6:86370710-86370729 | MsG0680034366.01.T01:intron | 25.0% |
| ! | TGCAAGTAGAATTTCATTAT+GGG | - | Chr6:86369395-86369414 | None:intergenic | 25.0% |
| !! | AGACGAAATTAATCAAGTTT+TGG | + | Chr6:86368391-86368410 | MsG0680034366.01.T01:CDS | 25.0% |
| !! | GTAATATTTGACTTTGTCAT+GGG | + | Chr6:86368639-86368658 | MsG0680034366.01.T01:intron | 25.0% |
| !! | TAAGTTGAGATATATATACC+AGG | - | Chr6:86368527-86368546 | None:intergenic | 25.0% |
| !! | TCATGAAGATACATTTTTCT+TGG | - | Chr6:86370475-86370494 | None:intergenic | 25.0% |
| !! | TGAATTAGAACTTTTTACTC+AGG | + | Chr6:86369769-86369788 | MsG0680034366.01.T01:CDS | 25.0% |
| !! | TTCTTTTAACAATAGAGCAA+TGG | + | Chr6:86370021-86370040 | MsG0680034366.01.T01:intron | 25.0% |
| !!! | AACTCTTACTTCTTTTAAGA+AGG | - | Chr6:86370200-86370219 | None:intergenic | 25.0% |
| !!! | ACTCTTACTTCTTTTAAGAA+GGG | - | Chr6:86370199-86370218 | None:intergenic | 25.0% |
| !!! | CAATCAAAATGATTTTTAGG+TGG | + | Chr6:86370053-86370072 | MsG0680034366.01.T01:intron | 25.0% |
| !!! | TATCCATGGTTTTATTAACT+CGG | + | Chr6:86370567-86370586 | MsG0680034366.01.T01:intron | 25.0% |
| AAAAGAAAATTGACAACGCT+TGG | + | Chr6:86371408-86371427 | MsG0680034366.01.T01:CDS | 30.0% | |
| AAATGTGAGTAACTTGAATC+TGG | - | Chr6:86368085-86368104 | None:intergenic | 30.0% | |
| AATGTGAGTAACTTGAATCT+GGG | - | Chr6:86368084-86368103 | None:intergenic | 30.0% | |
| AATTTACCCATCTTCAATCT+TGG | + | Chr6:86369934-86369953 | MsG0680034366.01.T01:intron | 30.0% | |
| ATATTGGGGCTCAAAATAAA+CGG | - | Chr6:86369666-86369685 | None:intergenic | 30.0% | |
| ATGTGAACATTACACAGATA+AGG | - | Chr6:86368821-86368840 | None:intergenic | 30.0% | |
| CACATATCAACAATATCAAG+TGG | + | Chr6:86371037-86371056 | MsG0680034366.01.T01:CDS | 30.0% | |
| CATCAATCCTAATGAGAAAT+CGG | + | Chr6:86367878-86367897 | MsG0680034366.01.T01:CDS | 30.0% | |
| GAATTGAGTTCATATAACCA+TGG | - | Chr6:86370730-86370749 | None:intergenic | 30.0% | |
| GAGGGAATATGATTTGAATA+GGG | + | Chr6:86371364-86371383 | MsG0680034366.01.T01:CDS | 30.0% | |
| GGTTCATGGTGAAAAAATAT+TGG | + | Chr6:86369207-86369226 | MsG0680034366.01.T01:CDS | 30.0% | |
| GTACTTGGAATGTTATATGA+GGG | + | Chr6:86371346-86371365 | MsG0680034366.01.T01:CDS | 30.0% | |
| TAACTATATACCAACAACAG+AGG | + | Chr6:86371006-86371025 | MsG0680034366.01.T01:CDS | 30.0% | |
| TGAGGGAATATGATTTGAAT+AGG | + | Chr6:86371363-86371382 | MsG0680034366.01.T01:CDS | 30.0% | |
| TGGTGAAAAAATATTGGAAG+AGG | + | Chr6:86369213-86369232 | MsG0680034366.01.T01:CDS | 30.0% | |
| TTGTCTTTATATATAGGTGG+TGG | + | Chr6:86369567-86369586 | MsG0680034366.01.T01:intron | 30.0% | |
| TTTCCTTGCTTGAGAATATT+GGG | - | Chr6:86369681-86369700 | None:intergenic | 30.0% | |
| ! | AAAGTATCACCATAATGACT+TGG | + | Chr6:86370449-86370468 | MsG0680034366.01.T01:intron | 30.0% |
| ! | ATTGACTCAATATGTCGTTT+GGG | + | Chr6:86368350-86368369 | MsG0680034366.01.T01:CDS | 30.0% |
| ! | CGTAATATTTGACTTTGTCA+TGG | + | Chr6:86368638-86368657 | MsG0680034366.01.T01:intron | 30.0% |
| ! | GTTGCTTTATAAATCACTCT+TGG | + | Chr6:86370114-86370133 | MsG0680034366.01.T01:CDS | 30.0% |
| ! | TTCCAAATTCCTTTTGATGT+AGG | - | Chr6:86369450-86369469 | None:intergenic | 30.0% |
| ! | TTTCTTTTGGCATTCTTGAA+TGG | - | Chr6:86371396-86371415 | None:intergenic | 30.0% |
| ! | TTTTCCTTGCTTGAGAATAT+TGG | - | Chr6:86369682-86369701 | None:intergenic | 30.0% |
| ! | TTTTGCTAAATGCAGTTCAT+AGG | + | Chr6:86368151-86368170 | MsG0680034366.01.T01:intron | 30.0% |
| ! | TTTTTACTCAGGCAATTGAA+AGG | + | Chr6:86369780-86369799 | MsG0680034366.01.T01:CDS | 30.0% |
| !! | AAGCGTTGTCAATTTTCTTT+TGG | - | Chr6:86371409-86371428 | None:intergenic | 30.0% |
| !! | AATAGTGATTGAAGAGTACT+AGG | + | Chr6:86368021-86368040 | MsG0680034366.01.T01:intron | 30.0% |
| !! | CTCTTACTTCTTTTAAGAAG+GGG | - | Chr6:86370198-86370217 | None:intergenic | 30.0% |
| !! | TGTTTCTGAAGTACGAAAAA+GGG | - | Chr6:86368956-86368975 | None:intergenic | 30.0% |
| !!! | AATCAAGTTGACTTTTTCCA+AGG | - | Chr6:86368333-86368352 | None:intergenic | 30.0% |
| !!! | AGTAGTAGAATGTTGCTTTT+GGG | + | Chr6:86369634-86369653 | MsG0680034366.01.T01:CDS | 30.0% |
| !!! | ATCAAGTTGACTTTTTCCAA+GGG | - | Chr6:86368332-86368351 | None:intergenic | 30.0% |
| AAACAGTTTGAGCAGAAAAG+AGG | + | Chr6:86371311-86371330 | MsG0680034366.01.T01:intron | 35.0% | |
| AAAGATTTACAGGCTAACAG+TGG | - | Chr6:86368698-86368717 | None:intergenic | 35.0% | |
| AATCCAAGCTTATATGAGTG+AGG | + | Chr6:86370967-86370986 | MsG0680034366.01.T01:CDS | 35.0% | |
| ACACACGTAAGAATAGGTAA+CGG | - | Chr6:86371473-86371492 | None:intergenic | 35.0% | |
| ACGACTTCTTACATTGGAAT+GGG | + | Chr6:86371076-86371095 | MsG0680034366.01.T01:CDS | 35.0% | |
| AGATGTGTTCAACCAATTCA+AGG | + | Chr6:86369105-86369124 | MsG0680034366.01.T01:intron | 35.0% | |
| AGCCTACATCAAAAGGAATT+TGG | + | Chr6:86369445-86369464 | MsG0680034366.01.T01:CDS | 35.0% | |
| AGGAAACTTCAGTGAAACAT+TGG | + | Chr6:86369135-86369154 | MsG0680034366.01.T01:CDS | 35.0% | |
| CGCTTGGAAAGATATAAATC+AGG | + | Chr6:86371424-86371443 | MsG0680034366.01.T01:CDS | 35.0% | |
| CGTACTTGGAATGTTATATG+AGG | + | Chr6:86371345-86371364 | MsG0680034366.01.T01:CDS | 35.0% | |
| GAACCGAGTTAATAAAACCA+TGG | - | Chr6:86370573-86370592 | None:intergenic | 35.0% | |
| GAATCTGGGCTAATATTAAG+TGG | - | Chr6:86368070-86368089 | None:intergenic | 35.0% | |
| GACAAAAGACATCTTTGACT+GGG | + | Chr6:86371108-86371127 | MsG0680034366.01.T01:CDS | 35.0% | |
| GAGCAAGAAATGAAGAAAGA+AGG | + | Chr6:86370154-86370173 | MsG0680034366.01.T01:CDS | 35.0% | |
| GATGACACATATGATGCATA+TGG | + | Chr6:86369737-86369756 | MsG0680034366.01.T01:CDS | 35.0% | |
| TAAAGCAACTTCGTGTAATC+TGG | - | Chr6:86370103-86370122 | None:intergenic | 35.0% | |
| TACGACTTCTTACATTGGAA+TGG | + | Chr6:86371075-86371094 | MsG0680034366.01.T01:CDS | 35.0% | |
| TAGCAACCAAGATTGAAGAT+GGG | - | Chr6:86369943-86369962 | None:intergenic | 35.0% | |
| TAGGTGGGATATTAATTGCT+TGG | + | Chr6:86370069-86370088 | MsG0680034366.01.T01:intron | 35.0% | |
| TCCTTATGCTTCAGAATCTA+TGG | + | Chr6:86367956-86367975 | MsG0680034366.01.T01:CDS | 35.0% | |
| TGGTTATCAAAGGGAAGTTT+AGG | + | Chr6:86370333-86370352 | MsG0680034366.01.T01:intron | 35.0% | |
| TTAGCAACCAAGATTGAAGA+TGG | - | Chr6:86369944-86369963 | None:intergenic | 35.0% | |
| TTCCTTGCTTGAGAATATTG+GGG | - | Chr6:86369680-86369699 | None:intergenic | 35.0% | |
| TTGAGAACACACGTAAGAAT+AGG | - | Chr6:86371479-86371498 | None:intergenic | 35.0% | |
| TTTACTTGTGTTGCAAGAGA+AGG | - | Chr6:86369289-86369308 | None:intergenic | 35.0% | |
| ! | AAAAATATTGGAAGAGGCGT+TGG | + | Chr6:86369219-86369238 | MsG0680034366.01.T01:CDS | 35.0% |
| ! | ATTCCTTTTGATGTAGGCTT+TGG | - | Chr6:86369444-86369463 | None:intergenic | 35.0% |
| ! | CTAGTCATCAAGTTTAGAGT+TGG | + | Chr6:86369890-86369909 | MsG0680034366.01.T01:intron | 35.0% |
| ! | GATTGACTCAATATGTCGTT+TGG | + | Chr6:86368349-86368368 | MsG0680034366.01.T01:CDS | 35.0% |
| ! | GCAGCAGCATTAACAATTTT+TGG | - | Chr6:86371145-86371164 | None:intergenic | 35.0% |
| ! | TCTACTTGCATTGGCAAAAT+TGG | + | Chr6:86369405-86369424 | MsG0680034366.01.T01:CDS | 35.0% |
| ! | TGCAAAACCGATTTCTCATT+AGG | - | Chr6:86367888-86367907 | None:intergenic | 35.0% |
| ! | TTTTCTTGGCCAAGTCATTA+TGG | - | Chr6:86370461-86370480 | None:intergenic | 35.0% |
| !! | ACCATAGATTCTGAAGCATA+AGG | - | Chr6:86367960-86367979 | None:intergenic | 35.0% |
| !! | AGAAGTGTCTTTCGTTTGAT+CGG | + | Chr6:86368778-86368797 | MsG0680034366.01.T01:intron | 35.0% |
| !! | ATTCTCTTGCTGTGCTATTT+AGG | + | Chr6:86368471-86368490 | MsG0680034366.01.T01:CDS | 35.0% |
| !! | CTTTATATATAGGTGGTGGA+AGG | + | Chr6:86369571-86369590 | MsG0680034366.01.T01:intron | 35.0% |
| !! | GTGTTTCTGAAGTACGAAAA+AGG | - | Chr6:86368957-86368976 | None:intergenic | 35.0% |
| !! | TTCTCTTGCTGTGCTATTTA+GGG | + | Chr6:86368472-86368491 | MsG0680034366.01.T01:CDS | 35.0% |
| !! | TTCTTTTAAGAAGGGGTCAA+GGG | - | Chr6:86370191-86370210 | None:intergenic | 35.0% |
| !!! | GAGTAGTAGAATGTTGCTTT+TGG | + | Chr6:86369633-86369652 | MsG0680034366.01.T01:CDS | 35.0% |
| AAAAAATCTCCCCAAACGCT+AGG | - | Chr6:86367933-86367952 | None:intergenic | 40.0% | |
| AAAAATCTCCCCAAACGCTA+GGG | - | Chr6:86367932-86367951 | None:intergenic | 40.0% | |
| AACATTGGTCAGAGATGTTG+AGG | + | Chr6:86369150-86369169 | MsG0680034366.01.T01:CDS | 40.0% | |
| ACATTGGTCAGAGATGTTGA+GGG | + | Chr6:86369151-86369170 | MsG0680034366.01.T01:CDS | 40.0% | |
| ACCATGAACCATCATATGTG+AGG | - | Chr6:86369197-86369216 | None:intergenic | 40.0% | |
| ACTACTCTATCTCGTGCATA+CGG | - | Chr6:86369620-86369639 | None:intergenic | 40.0% | |
| ATAGCACAGCAAGAGAATGA+AGG | - | Chr6:86368469-86368488 | None:intergenic | 40.0% | |
| ATAGTTAGCATTCAGCCATC+TGG | - | Chr6:86370993-86371012 | None:intergenic | 40.0% | |
| CGACAAAAGACATCTTTGAC+TGG | + | Chr6:86371107-86371126 | MsG0680034366.01.T01:CDS | 40.0% | |
| CTCAAAAACAGAGAAACCCT+TGG | + | Chr6:86368313-86368332 | MsG0680034366.01.T01:CDS | 40.0% | |
| GATAACTACACACACTCTGA+CGG | + | Chr6:86371536-86371555 | MsG0680034366.01.T01:CDS | 40.0% | |
| GGAACCTGATATGAATACTG+CGG | + | Chr6:86368247-86368266 | MsG0680034366.01.T01:intron | 40.0% | |
| GGATGAATCTTGCTCATAGA+TGG | - | Chr6:86369374-86369393 | None:intergenic | 40.0% | |
| GTATGAAGCCTCACATATGA+TGG | + | Chr6:86369186-86369205 | MsG0680034366.01.T01:CDS | 40.0% | |
| GTGGGATATTAATTGCTTGG+AGG | + | Chr6:86370072-86370091 | MsG0680034366.01.T01:CDS | 40.0% | |
| TGCTATACATTGCAGGCTTA+GGG | + | Chr6:86371162-86371181 | MsG0680034366.01.T01:CDS | 40.0% | |
| TTGCAAGAGAAGGACTCAAT+CGG | - | Chr6:86369279-86369298 | None:intergenic | 40.0% | |
| TTGGCTACGACTTCTTACAT+TGG | + | Chr6:86371070-86371089 | MsG0680034366.01.T01:CDS | 40.0% | |
| !! | ATAGGTAACGGAACTTCAGT+TGG | - | Chr6:86371461-86371480 | None:intergenic | 40.0% |
| !! | CAATCTCTCGCGTTTTATTG+AGG | + | Chr6:86371496-86371515 | MsG0680034366.01.T01:CDS | 40.0% |
| !! | CTTCTTTTAAGAAGGGGTCA+AGG | - | Chr6:86370192-86370211 | None:intergenic | 40.0% |
| AACCAATTCAAGGACGAGCA+AGG | + | Chr6:86369115-86369134 | MsG0680034366.01.T01:CDS | 45.0% | |
| AAGAAGTCGTAGCCAACACT+GGG | - | Chr6:86371066-86371085 | None:intergenic | 45.0% | |
| AGATTTCCACCCTAGCGTTT+GGG | + | Chr6:86367920-86367939 | MsG0680034366.01.T01:CDS | 45.0% | |
| AGCCCCAATATTCTCAAGCA+AGG | + | Chr6:86369675-86369694 | MsG0680034366.01.T01:CDS | 45.0% | |
| AGGACACGTTTCTTCGTACT+TGG | + | Chr6:86371331-86371350 | MsG0680034366.01.T01:CDS | 45.0% | |
| ATCAAGTGGTTACCCAGTGT+TGG | + | Chr6:86371051-86371070 | MsG0680034366.01.T01:CDS | 45.0% | |
| ATGCTGCTGCTATACATTGC+AGG | + | Chr6:86371155-86371174 | MsG0680034366.01.T01:CDS | 45.0% | |
| CAAAAACTTGCCTAGGCTAG+TGG | + | Chr6:86369333-86369352 | MsG0680034366.01.T01:CDS | 45.0% | |
| CATGGACTTTACGTTTCACC+TGG | + | Chr6:86368506-86368525 | MsG0680034366.01.T01:CDS | 45.0% | |
| CTGCTATACATTGCAGGCTT+AGG | + | Chr6:86371161-86371180 | MsG0680034366.01.T01:CDS | 45.0% | |
| CTTATATGAGTGAGGCCAGA+TGG | + | Chr6:86370975-86370994 | MsG0680034366.01.T01:CDS | 45.0% | |
| GCCTCACATATGATGGTTCA+TGG | + | Chr6:86369193-86369212 | MsG0680034366.01.T01:CDS | 45.0% | |
| GCTCCAAAGCCTACATCAAA+AGG | + | Chr6:86369438-86369457 | MsG0680034366.01.T01:CDS | 45.0% | |
| GGATGAAATTGTGTCAAGCG+AGG | + | Chr6:86371183-86371202 | MsG0680034366.01.T01:CDS | 45.0% | |
| TAAGAAGTCGTAGCCAACAC+TGG | - | Chr6:86371067-86371086 | None:intergenic | 45.0% | |
| TGCAAGAGAAGGACTCAATC+GGG | - | Chr6:86369278-86369297 | None:intergenic | 45.0% | |
| TGCATGTACTCCTCTGTTGT+TGG | - | Chr6:86371019-86371038 | None:intergenic | 45.0% | |
| TGGCCTCACTCATATAAGCT+TGG | - | Chr6:86370973-86370992 | None:intergenic | 45.0% | |
| TGTGCCGCAGTATTCATATC+AGG | - | Chr6:86368254-86368273 | None:intergenic | 45.0% | |
| TTCCTTGCTCGTCCTTGAAT+TGG | - | Chr6:86369120-86369139 | None:intergenic | 45.0% | |
| ! | TAACTTCTTGCCACTAGCCT+AGG | - | Chr6:86369346-86369365 | None:intergenic | 45.0% |
| !! | ATATAGGTGGTGGAAGGAGT+TGG | + | Chr6:86369577-86369596 | MsG0680034366.01.T01:intron | 45.0% |
| !! | CTGTGCTATTTAGGGTGTTG+AGG | + | Chr6:86368480-86368499 | MsG0680034366.01.T01:CDS | 45.0% |
| !! | TTTAGGGTGTTGAGGCAACA+TGG | + | Chr6:86368488-86368507 | MsG0680034366.01.T01:CDS | 45.0% |
| !!! | GAGGCGTTGGTTTTTACTTC+TGG | + | Chr6:86369232-86369251 | MsG0680034366.01.T01:CDS | 45.0% |
| AAGAGAAGGACTCAATCGGG+TGG | - | Chr6:86369275-86369294 | None:intergenic | 50.0% | |
| CAGATTTCCACCCTAGCGTT+TGG | + | Chr6:86367919-86367938 | MsG0680034366.01.T01:CDS | 50.0% | |
| CTCTGCGCAAAAACTTGCCT+AGG | + | Chr6:86369326-86369345 | MsG0680034366.01.T01:CDS | 50.0% | |
| GATTTCCACCCTAGCGTTTG+GGG | + | Chr6:86367921-86367940 | MsG0680034366.01.T01:CDS | 50.0% | |
| TTCTGGTCACCTTGAGTCCA+TGG | + | Chr6:86369249-86369268 | MsG0680034366.01.T01:CDS | 50.0% | |
| AATCTCCCCAAACGCTAGGG+TGG | - | Chr6:86367929-86367948 | None:intergenic | 55.0% | |
| AGGACTCAATCGGGTGGCCA+TGG | - | Chr6:86369269-86369288 | None:intergenic | 60.0% | |
| ATCGGGTGGCCATGGACTCA+AGG | - | Chr6:86369261-86369280 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr6 | gene | 86367861 | 86371610 | 86367861 | ID=MsG0680034366.01;Name=MsG0680034366.01 |
| Chr6 | mRNA | 86367861 | 86371610 | 86367861 | ID=MsG0680034366.01.T01;Parent=MsG0680034366.01;Name=MsG0680034366.01.T01;_AED=0.09;_eAED=0.09;_QI=0|0|0|1|1|1|7|0|556 |
| Chr6 | exon | 86367861 | 86367977 | 86367861 | ID=MsG0680034366.01.T01:exon:13110;Parent=MsG0680034366.01.T01 |
| Chr6 | exon | 86368248 | 86368527 | 86368248 | ID=MsG0680034366.01.T01:exon:13111;Parent=MsG0680034366.01.T01 |
| Chr6 | exon | 86369107 | 86369479 | 86369107 | ID=MsG0680034366.01.T01:exon:13112;Parent=MsG0680034366.01.T01 |
| Chr6 | exon | 86369583 | 86369801 | 86369583 | ID=MsG0680034366.01.T01:exon:13113;Parent=MsG0680034366.01.T01 |
| Chr6 | exon | 86370072 | 86370210 | 86370072 | ID=MsG0680034366.01.T01:exon:13114;Parent=MsG0680034366.01.T01 |
| Chr6 | exon | 86370956 | 86371204 | 86370956 | ID=MsG0680034366.01.T01:exon:13115;Parent=MsG0680034366.01.T01 |
| Chr6 | exon | 86371317 | 86371610 | 86371317 | ID=MsG0680034366.01.T01:exon:13116;Parent=MsG0680034366.01.T01 |
| Chr6 | CDS | 86367861 | 86367977 | 86367861 | ID=MsG0680034366.01.T01:cds;Parent=MsG0680034366.01.T01 |
| Chr6 | CDS | 86368248 | 86368527 | 86368248 | ID=MsG0680034366.01.T01:cds;Parent=MsG0680034366.01.T01 |
| Chr6 | CDS | 86369107 | 86369479 | 86369107 | ID=MsG0680034366.01.T01:cds;Parent=MsG0680034366.01.T01 |
| Chr6 | CDS | 86369583 | 86369801 | 86369583 | ID=MsG0680034366.01.T01:cds;Parent=MsG0680034366.01.T01 |
| Chr6 | CDS | 86370072 | 86370210 | 86370072 | ID=MsG0680034366.01.T01:cds;Parent=MsG0680034366.01.T01 |
| Chr6 | CDS | 86370956 | 86371204 | 86370956 | ID=MsG0680034366.01.T01:cds;Parent=MsG0680034366.01.T01 |
| Chr6 | CDS | 86371317 | 86371610 | 86371317 | ID=MsG0680034366.01.T01:cds;Parent=MsG0680034366.01.T01 |
| Gene Sequence |
| Protein sequence |
