Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680034369.01.T01 | XP_004514757.1 | 61.191 | 554 | 137 | 3 | 1 | 476 | 1 | 554 | 0 | 690 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680034369.01.T01 | B9SBV6 | 40.842 | 546 | 226 | 10 | 17 | 478 | 15 | 547 | 1.50E-135 | 404 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680034369.01.T01 | A0A1S2Z458 | 61.191 | 554 | 137 | 3 | 1 | 476 | 1 | 554 | 0.0 | 690 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0680034293.01 | MsG0680034369.01 | 0.836464 | 9.214721e-57 | 1.162187e-53 |
| MsG0680034295.01 | MsG0680034369.01 | 0.854153 | 1.487537e-61 | 3.291730e-58 |
| MsG0680034298.01 | MsG0680034369.01 | 0.804310 | 2.297235e-49 | 1.180552e-46 |
| MsG0680034299.01 | MsG0680034369.01 | 0.819797 | 9.616963e-53 | 7.475566e-50 |
| MsG0680034306.01 | MsG0680034369.01 | 0.809852 | 1.541705e-50 | 9.151568e-48 |
| MsG0680034307.01 | MsG0680034369.01 | 0.808255 | 3.387580e-50 | 1.927765e-47 |
| MsG0680034310.01 | MsG0680034369.01 | 0.802950 | 4.398557e-49 | 2.182862e-46 |
| MsG0680034312.01 | MsG0680034369.01 | 0.844368 | 7.892478e-59 | 1.271298e-55 |
| MsG0680034321.01 | MsG0680034369.01 | 0.848897 | 4.571418e-60 | 8.515690e-57 |
| MsG0680034325.01 | MsG0680034369.01 | 0.850616 | 1.513667e-60 | 2.982158e-57 |
| MsG0680034326.01 | MsG0680034369.01 | 0.808317 | 3.286916e-50 | 1.873471e-47 |
| MsG0680034328.01 | MsG0680034369.01 | 0.844879 | 5.751623e-59 | 9.414718e-56 |
| MsG0680034329.01 | MsG0680034369.01 | 0.830926 | 2.230720e-55 | 2.384335e-52 |
| MsG0680034330.01 | MsG0680034369.01 | 0.811620 | 6.392423e-51 | 3.975830e-48 |
| MsG0680034332.01 | MsG0680034369.01 | 0.827524 | 1.491966e-54 | 1.443892e-51 |
| MsG0680034334.01 | MsG0680034369.01 | 0.808249 | 3.398530e-50 | 1.933666e-47 |
| MsG0680034348.01 | MsG0680034369.01 | 0.852636 | 4.053441e-61 | 8.523927e-58 |
| MsG0680034351.01 | MsG0680034369.01 | 0.917606 | 4.325168e-86 | 1.259096e-81 |
| MsG0680034352.01 | MsG0680034369.01 | 0.911608 | 5.017188e-83 | 1.083489e-78 |
| MsG0680034354.01 | MsG0680034369.01 | 0.814893 | 1.221488e-51 | 8.296963e-49 |
| MsG0680034356.01 | MsG0680034369.01 | 0.814415 | 1.558920e-51 | 1.045427e-48 |
| MsG0680034362.01 | MsG0680034369.01 | 0.804230 | 2.386283e-49 | 1.223772e-46 |
| MsG0680034366.01 | MsG0680034369.01 | 0.881261 | 2.779719e-70 | 1.617310e-66 |
| MsG0680034367.01 | MsG0680034369.01 | 0.867637 | 1.181539e-65 | 4.154303e-62 |
| MsG0680034369.01 | MsG0680034418.01 | 0.826133 | 3.206020e-54 | 2.980703e-51 |
| MsG0680034369.01 | MsG0780040497.01 | 0.807215 | 5.635029e-50 | 3.120515e-47 |
| MsG0680034369.01 | MsG0880045854.01 | 0.821942 | 3.087701e-53 | 2.548004e-50 |
| MsG0480022055.01 | MsG0680034369.01 | 0.809857 | 1.537619e-50 | 9.128677e-48 |
| MsG0580025431.01 | MsG0680034369.01 | 0.801949 | 7.072807e-49 | 3.421605e-46 |
| MsG0280009232.01 | MsG0680034369.01 | 0.834289 | 3.266750e-56 | 3.859629e-53 |
PPI
| Gene1 | Gene2 | Type |
|---|---|---|
| MsG0680034369.01 | MsG0280009520.01 | PPI |
| MsG0680034369.01 | MsG0880044118.01 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680034369.01.T01 | MTR_6g008560 | 55.993 | 559 | 163 | 7 | 1 | 478 | 1 | 557 | 0.0 | 605 |
| MsG0680034369.01.T01 | MTR_5g062230 | 55.576 | 556 | 166 | 6 | 1 | 478 | 1 | 553 | 0.0 | 581 |
| MsG0680034369.01.T01 | MTR_6g039440 | 54.643 | 560 | 165 | 7 | 1 | 478 | 1 | 553 | 0.0 | 572 |
| MsG0680034369.01.T01 | MTR_3g464190 | 53.501 | 557 | 180 | 7 | 1 | 478 | 1 | 557 | 0.0 | 555 |
| MsG0680034369.01.T01 | MTR_5g094620 | 51.259 | 556 | 174 | 6 | 1 | 478 | 1 | 537 | 0.0 | 551 |
| MsG0680034369.01.T01 | MTR_5g073260 | 52.390 | 544 | 179 | 8 | 13 | 476 | 7 | 550 | 0.0 | 529 |
| MsG0680034369.01.T01 | MTR_4g081460 | 47.349 | 547 | 207 | 6 | 9 | 475 | 14 | 559 | 1.30e-173 | 499 |
| MsG0680034369.01.T01 | MTR_6g008560 | 54.342 | 403 | 121 | 5 | 137 | 478 | 1 | 401 | 4.34e-147 | 426 |
| MsG0680034369.01.T01 | MTR_4g048460 | 68.858 | 289 | 90 | 0 | 190 | 478 | 273 | 561 | 6.04e-139 | 411 |
| MsG0680034369.01.T01 | MTR_4g048460 | 53.886 | 193 | 70 | 1 | 7 | 180 | 12 | 204 | 5.26e-63 | 214 |
| MsG0680034369.01.T01 | MTR_5g073200 | 64.138 | 290 | 104 | 0 | 187 | 476 | 258 | 547 | 6.83e-132 | 393 |
| MsG0680034369.01.T01 | MTR_5g073200 | 62.434 | 189 | 51 | 2 | 12 | 180 | 4 | 192 | 3.87e-67 | 225 |
| MsG0680034369.01.T01 | MTR_2g081980 | 37.956 | 548 | 254 | 9 | 15 | 478 | 12 | 557 | 6.09e-126 | 378 |
| MsG0680034369.01.T01 | MTR_2g082010 | 36.314 | 548 | 265 | 8 | 13 | 478 | 23 | 568 | 2.66e-122 | 369 |
| MsG0680034369.01.T01 | MTR_4g019550 | 34.177 | 553 | 262 | 10 | 15 | 478 | 19 | 558 | 1.60e-97 | 305 |
| MsG0680034369.01.T01 | MTR_2g082050 | 34.395 | 471 | 258 | 14 | 43 | 476 | 1 | 457 | 2.25e-85 | 270 |
| MsG0680034369.01.T01 | MTR_4g048460 | 69.271 | 192 | 59 | 0 | 190 | 381 | 273 | 464 | 3.43e-85 | 270 |
| MsG0680034369.01.T01 | MTR_4g048460 | 53.886 | 193 | 70 | 1 | 7 | 180 | 12 | 204 | 6.38e-64 | 214 |
| MsG0680034369.01.T01 | MTR_7g057340 | 66.279 | 172 | 58 | 0 | 307 | 478 | 1 | 172 | 2.12e-83 | 255 |
| MsG0680034369.01.T01 | MTR_8g007515 | 41.216 | 296 | 169 | 4 | 186 | 478 | 263 | 556 | 6.16e-77 | 251 |
| MsG0680034369.01.T01 | MTR_8g007515 | 40.526 | 190 | 91 | 3 | 13 | 180 | 9 | 198 | 6.13e-33 | 132 |
| MsG0680034369.01.T01 | MTR_7g057390 | 63.953 | 172 | 59 | 1 | 307 | 478 | 1 | 169 | 8.92e-77 | 238 |
| MsG0680034369.01.T01 | MTR_2g082060 | 38.983 | 295 | 165 | 5 | 186 | 478 | 272 | 553 | 1.19e-69 | 232 |
| MsG0680034369.01.T01 | MTR_2g082060 | 34.583 | 240 | 127 | 7 | 1 | 215 | 3 | 237 | 3.81e-34 | 135 |
| MsG0680034369.01.T01 | MTR_2g089130 | 26.761 | 497 | 270 | 8 | 44 | 458 | 62 | 546 | 4.86e-59 | 204 |
| MsG0680034369.01.T01 | MTR_4g092010 | 27.054 | 499 | 278 | 9 | 55 | 470 | 61 | 556 | 2.85e-57 | 199 |
| MsG0680034369.01.T01 | MTR_4g092020 | 29.412 | 510 | 271 | 11 | 44 | 472 | 64 | 565 | 1.13e-55 | 195 |
| MsG0680034369.01.T01 | MTR_2g089120 | 26.223 | 511 | 280 | 10 | 49 | 476 | 67 | 563 | 3.12e-54 | 191 |
| MsG0680034369.01.T01 | MTR_4g045810 | 32.095 | 296 | 200 | 1 | 182 | 476 | 284 | 579 | 7.56e-53 | 187 |
| MsG0680034369.01.T01 | MTR_4g045810 | 31.628 | 215 | 113 | 6 | 13 | 204 | 41 | 244 | 4.93e-22 | 99.8 |
| MsG0680034369.01.T01 | MTR_3g015080 | 47.093 | 172 | 53 | 2 | 307 | 478 | 1 | 134 | 2.56e-45 | 155 |
| MsG0680034369.01.T01 | MTR_7g010710 | 32.770 | 296 | 198 | 1 | 182 | 476 | 258 | 553 | 3.19e-44 | 163 |
| MsG0680034369.01.T01 | MTR_7g010710 | 29.327 | 208 | 126 | 4 | 1 | 191 | 1 | 204 | 4.15e-19 | 90.5 |
| MsG0680034369.01.T01 | MTR_2g064425 | 32.526 | 289 | 190 | 4 | 190 | 476 | 284 | 569 | 8.08e-44 | 162 |
| MsG0680034369.01.T01 | MTR_2g064425 | 40.764 | 157 | 77 | 6 | 17 | 166 | 53 | 200 | 2.26e-18 | 88.2 |
| MsG0680034369.01.T01 | MTR_2g064425 | 32.526 | 289 | 190 | 4 | 190 | 476 | 299 | 584 | 9.29e-44 | 162 |
| MsG0680034369.01.T01 | MTR_2g064425 | 41.176 | 170 | 73 | 5 | 17 | 166 | 53 | 215 | 4.01e-22 | 100 |
| MsG0680034369.01.T01 | MTR_2g065450 | 31.834 | 289 | 194 | 3 | 189 | 476 | 302 | 588 | 1.72e-42 | 159 |
| MsG0680034369.01.T01 | MTR_2g065450 | 29.279 | 222 | 128 | 5 | 10 | 212 | 51 | 262 | 8.39e-18 | 86.7 |
| MsG0680034369.01.T01 | MTR_8g057020 | 28.986 | 345 | 231 | 5 | 137 | 476 | 252 | 587 | 3.50e-42 | 158 |
| MsG0680034369.01.T01 | MTR_8g057020 | 34.463 | 177 | 91 | 4 | 10 | 167 | 48 | 218 | 5.84e-21 | 96.3 |
| MsG0680034369.01.T01 | MTR_6g065040 | 28.467 | 274 | 188 | 3 | 184 | 451 | 120 | 391 | 2.00e-39 | 147 |
| MsG0680034369.01.T01 | MTR_3g063120 | 29.197 | 274 | 188 | 4 | 203 | 472 | 217 | 488 | 1.11e-38 | 147 |
| MsG0680034369.01.T01 | MTR_6g064980 | 27.817 | 284 | 197 | 3 | 184 | 461 | 222 | 503 | 2.48e-37 | 144 |
| MsG0680034369.01.T01 | MTR_3g465090 | 29.457 | 258 | 178 | 3 | 203 | 456 | 241 | 498 | 2.43e-36 | 141 |
| MsG0680034369.01.T01 | MTR_3g052120 | 29.153 | 295 | 203 | 4 | 182 | 472 | 220 | 512 | 6.83e-36 | 139 |
| MsG0680034369.01.T01 | MTR_3g063170 | 27.737 | 274 | 190 | 3 | 184 | 451 | 222 | 493 | 7.67e-36 | 139 |
| MsG0680034369.01.T01 | MTR_3g063140 | 27.372 | 274 | 191 | 3 | 184 | 451 | 222 | 493 | 1.73e-35 | 138 |
| MsG0680034369.01.T01 | MTR_2g010960 | 26.370 | 292 | 194 | 6 | 192 | 469 | 234 | 518 | 4.02e-30 | 123 |
| MsG0680034369.01.T01 | MTR_2g010960 | 31.206 | 141 | 72 | 3 | 47 | 167 | 9 | 144 | 1.09e-11 | 67.4 |
| MsG0680034369.01.T01 | MTR_2g064425 | 46.364 | 110 | 56 | 2 | 190 | 298 | 284 | 391 | 2.44e-25 | 108 |
| MsG0680034369.01.T01 | MTR_2g064425 | 40.764 | 157 | 77 | 6 | 17 | 166 | 53 | 200 | 1.04e-18 | 88.6 |
| MsG0680034369.01.T01 | MTR_2g064425 | 46.364 | 110 | 56 | 2 | 190 | 298 | 299 | 406 | 2.96e-25 | 108 |
| MsG0680034369.01.T01 | MTR_2g064425 | 41.176 | 170 | 73 | 5 | 17 | 166 | 53 | 215 | 1.35e-22 | 100 |
| MsG0680034369.01.T01 | MTR_7g050990 | 53.535 | 99 | 35 | 2 | 188 | 286 | 94 | 181 | 4.91e-25 | 109 |
| MsG0680034369.01.T01 | MTR_5g094530 | 46.087 | 115 | 28 | 2 | 189 | 303 | 104 | 184 | 1.14e-24 | 101 |
| MsG0680034369.01.T01 | MTR_2g012870 | 24.068 | 295 | 211 | 8 | 188 | 476 | 467 | 754 | 1.25e-14 | 77.0 |
| MsG0680034369.01.T01 | MTR_2g012900 | 24.444 | 225 | 161 | 6 | 188 | 408 | 480 | 699 | 1.58e-12 | 70.5 |
| MsG0680034369.01.T01 | MTR_3g058160 | 22.185 | 302 | 208 | 9 | 189 | 476 | 472 | 760 | 4.00e-12 | 68.9 |
| MsG0680034369.01.T01 | MTR_3g058160 | 22.185 | 302 | 208 | 9 | 189 | 476 | 485 | 773 | 4.25e-12 | 68.9 |
| MsG0680034369.01.T01 | MTR_3g058160 | 22.185 | 302 | 208 | 9 | 189 | 476 | 513 | 801 | 4.55e-12 | 68.9 |
| MsG0680034369.01.T01 | MTR_3g058160 | 22.185 | 302 | 208 | 9 | 189 | 476 | 492 | 780 | 4.66e-12 | 68.9 |
| MsG0680034369.01.T01 | MTR_3g058160 | 22.185 | 302 | 208 | 9 | 189 | 476 | 281 | 569 | 4.69e-12 | 68.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680034369.01.T01 | AT5G23960 | 33.212 | 551 | 275 | 10 | 13 | 478 | 3 | 545 | 4.39e-99 | 308 |
| MsG0680034369.01.T01 | AT5G23960 | 33.213 | 554 | 273 | 12 | 13 | 478 | 3 | 547 | 6.99e-98 | 305 |
| MsG0680034369.01.T01 | AT3G14490 | 30.092 | 545 | 295 | 7 | 17 | 478 | 60 | 601 | 1.50e-81 | 264 |
| MsG0680034369.01.T01 | AT1G33750 | 28.839 | 534 | 298 | 7 | 24 | 478 | 73 | 603 | 1.10e-77 | 254 |
| MsG0680034369.01.T01 | AT3G32030 | 26.916 | 561 | 316 | 13 | 2 | 478 | 54 | 604 | 7.31e-70 | 233 |
| MsG0680034369.01.T01 | AT5G48110 | 36.986 | 292 | 179 | 5 | 188 | 478 | 52 | 339 | 5.28e-67 | 219 |
| MsG0680034369.01.T01 | AT1G31950 | 27.920 | 548 | 294 | 13 | 22 | 478 | 70 | 607 | 9.23e-66 | 223 |
| MsG0680034369.01.T01 | AT1G70080 | 37.024 | 289 | 180 | 2 | 188 | 474 | 319 | 607 | 1.32e-65 | 222 |
| MsG0680034369.01.T01 | AT1G70080 | 33.889 | 180 | 96 | 5 | 8 | 166 | 57 | 234 | 9.98e-21 | 95.9 |
| MsG0680034369.01.T01 | AT4G20230 | 27.821 | 514 | 280 | 9 | 48 | 474 | 92 | 601 | 5.70e-65 | 221 |
| MsG0680034369.01.T01 | AT4G20230 | 27.821 | 514 | 280 | 9 | 48 | 474 | 104 | 613 | 6.39e-65 | 221 |
| MsG0680034369.01.T01 | AT1G31950 | 28.096 | 541 | 301 | 12 | 22 | 478 | 70 | 606 | 6.52e-65 | 220 |
| MsG0680034369.01.T01 | AT3G14520 | 34.471 | 293 | 191 | 1 | 187 | 478 | 312 | 604 | 1.14e-60 | 209 |
| MsG0680034369.01.T01 | AT3G14520 | 32.530 | 166 | 88 | 4 | 22 | 167 | 68 | 229 | 8.50e-18 | 86.7 |
| MsG0680034369.01.T01 | AT3G29410 | 33.224 | 304 | 202 | 1 | 176 | 478 | 195 | 498 | 1.15e-59 | 204 |
| MsG0680034369.01.T01 | AT3G29410 | 30.667 | 150 | 83 | 2 | 59 | 189 | 1 | 148 | 1.72e-12 | 69.7 |
| MsG0680034369.01.T01 | AT3G29410 | 33.224 | 304 | 202 | 1 | 176 | 478 | 300 | 603 | 1.29e-58 | 203 |
| MsG0680034369.01.T01 | AT3G29410 | 30.457 | 197 | 106 | 4 | 17 | 189 | 64 | 253 | 4.11e-18 | 87.8 |
| MsG0680034369.01.T01 | AT4G20200 | 32.335 | 334 | 218 | 6 | 149 | 478 | 275 | 604 | 1.82e-57 | 200 |
| MsG0680034369.01.T01 | AT4G20200 | 31.288 | 163 | 83 | 5 | 48 | 185 | 92 | 250 | 3.75e-15 | 78.6 |
| MsG0680034369.01.T01 | AT4G15870 | 27.726 | 541 | 287 | 16 | 25 | 478 | 75 | 598 | 1.03e-56 | 198 |
| MsG0680034369.01.T01 | AT4G20210 | 31.834 | 289 | 196 | 1 | 191 | 478 | 312 | 600 | 1.73e-56 | 197 |
| MsG0680034369.01.T01 | AT4G20210 | 27.636 | 275 | 157 | 9 | 17 | 266 | 58 | 315 | 1.16e-17 | 86.3 |
| MsG0680034369.01.T01 | AT3G14540 | 34.471 | 293 | 191 | 1 | 187 | 478 | 309 | 601 | 1.99e-56 | 197 |
| MsG0680034369.01.T01 | AT3G14540 | 31.319 | 182 | 103 | 3 | 22 | 184 | 65 | 243 | 3.61e-20 | 94.0 |
| MsG0680034369.01.T01 | AT5G44630 | 32.867 | 286 | 192 | 0 | 191 | 476 | 270 | 555 | 9.20e-56 | 195 |
| MsG0680034369.01.T01 | AT5G44630 | 32.642 | 193 | 96 | 7 | 18 | 182 | 14 | 200 | 9.66e-19 | 89.4 |
| MsG0680034369.01.T01 | AT1G48800 | 26.239 | 545 | 310 | 14 | 17 | 474 | 63 | 602 | 3.68e-54 | 191 |
| MsG0680034369.01.T01 | AT4G13300 | 32.660 | 297 | 198 | 2 | 184 | 478 | 258 | 554 | 4.13e-54 | 190 |
| MsG0680034369.01.T01 | AT4G13300 | 35.542 | 166 | 81 | 5 | 25 | 168 | 20 | 181 | 1.63e-18 | 89.0 |
| MsG0680034369.01.T01 | AT4G13280 | 32.323 | 297 | 199 | 2 | 184 | 478 | 258 | 554 | 6.09e-54 | 190 |
| MsG0680034369.01.T01 | AT4G13280 | 34.146 | 164 | 82 | 5 | 27 | 168 | 22 | 181 | 5.90e-14 | 74.7 |
| MsG0680034369.01.T01 | AT3G29190 | 31.894 | 301 | 195 | 4 | 184 | 478 | 305 | 601 | 4.04e-53 | 189 |
| MsG0680034369.01.T01 | AT3G29190 | 29.861 | 144 | 78 | 3 | 48 | 170 | 89 | 230 | 1.14e-11 | 67.4 |
| MsG0680034369.01.T01 | AT2G23230 | 34.130 | 293 | 190 | 3 | 188 | 477 | 307 | 599 | 2.30e-52 | 187 |
| MsG0680034369.01.T01 | AT2G23230 | 27.338 | 278 | 157 | 9 | 16 | 266 | 55 | 314 | 1.43e-16 | 82.8 |
| MsG0680034369.01.T01 | AT2G23230 | 33.788 | 293 | 186 | 4 | 188 | 477 | 307 | 594 | 7.76e-50 | 180 |
| MsG0680034369.01.T01 | AT2G23230 | 27.338 | 278 | 157 | 9 | 16 | 266 | 55 | 314 | 1.66e-16 | 82.8 |
| MsG0680034369.01.T01 | AT3G25810 | 26.212 | 557 | 314 | 13 | 15 | 478 | 45 | 597 | 9.75e-49 | 176 |
| MsG0680034369.01.T01 | AT1G31950 | 27.430 | 463 | 235 | 13 | 22 | 393 | 70 | 522 | 5.89e-48 | 173 |
| MsG0680034369.01.T01 | AT1G66020 | 30.233 | 301 | 208 | 2 | 176 | 474 | 294 | 594 | 7.76e-46 | 169 |
| MsG0680034369.01.T01 | AT1G66020 | 29.885 | 174 | 98 | 4 | 17 | 169 | 56 | 226 | 2.42e-14 | 75.9 |
| MsG0680034369.01.T01 | AT3G29110 | 31.615 | 291 | 197 | 2 | 188 | 476 | 305 | 595 | 1.71e-45 | 167 |
| MsG0680034369.01.T01 | AT3G29110 | 32.184 | 174 | 94 | 5 | 17 | 169 | 55 | 225 | 1.16e-13 | 73.9 |
| MsG0680034369.01.T01 | AT1G61680 | 32.130 | 277 | 187 | 1 | 193 | 468 | 286 | 562 | 2.79e-45 | 166 |
| MsG0680034369.01.T01 | AT1G61680 | 36.154 | 130 | 64 | 3 | 54 | 170 | 77 | 200 | 6.00e-15 | 77.8 |
| MsG0680034369.01.T01 | AT1G61680 | 32.130 | 277 | 187 | 1 | 193 | 468 | 293 | 569 | 2.86e-45 | 166 |
| MsG0680034369.01.T01 | AT1G61680 | 34.307 | 137 | 64 | 3 | 54 | 170 | 77 | 207 | 4.07e-14 | 75.1 |
| MsG0680034369.01.T01 | AT4G16730 | 29.139 | 302 | 205 | 5 | 183 | 478 | 195 | 493 | 5.96e-45 | 164 |
| MsG0680034369.01.T01 | AT4G16730 | 29.333 | 300 | 203 | 5 | 183 | 476 | 241 | 537 | 1.18e-44 | 164 |
| MsG0680034369.01.T01 | AT4G13280 | 30.640 | 297 | 174 | 4 | 184 | 478 | 258 | 524 | 7.66e-43 | 159 |
| MsG0680034369.01.T01 | AT4G13280 | 34.146 | 164 | 82 | 5 | 27 | 168 | 22 | 181 | 4.15e-14 | 75.1 |
| MsG0680034369.01.T01 | AT2G24210 | 30.667 | 300 | 202 | 5 | 184 | 478 | 292 | 590 | 2.51e-41 | 156 |
| MsG0680034369.01.T01 | AT2G24210 | 32.716 | 162 | 89 | 3 | 10 | 155 | 39 | 196 | 1.30e-16 | 83.2 |
| MsG0680034369.01.T01 | AT4G16740 | 30.976 | 297 | 198 | 6 | 184 | 478 | 273 | 564 | 1.91e-40 | 153 |
| MsG0680034369.01.T01 | AT3G14540 | 36.683 | 199 | 126 | 0 | 187 | 385 | 309 | 507 | 8.35e-40 | 150 |
| MsG0680034369.01.T01 | AT3G14540 | 31.319 | 182 | 103 | 3 | 22 | 184 | 65 | 243 | 2.18e-20 | 94.4 |
| MsG0680034369.01.T01 | AT1G48820 | 28.966 | 290 | 185 | 5 | 186 | 471 | 285 | 557 | 2.52e-39 | 150 |
| MsG0680034369.01.T01 | AT1G48820 | 33.758 | 157 | 90 | 5 | 17 | 170 | 63 | 208 | 2.43e-13 | 72.8 |
| MsG0680034369.01.T01 | AT3G25830 | 30.537 | 298 | 198 | 6 | 188 | 478 | 299 | 594 | 1.44e-38 | 148 |
| MsG0680034369.01.T01 | AT3G25830 | 30.952 | 168 | 86 | 4 | 15 | 158 | 45 | 206 | 1.05e-14 | 77.0 |
| MsG0680034369.01.T01 | AT3G25820 | 30.537 | 298 | 198 | 6 | 188 | 478 | 299 | 594 | 1.44e-38 | 148 |
| MsG0680034369.01.T01 | AT3G25820 | 30.952 | 168 | 86 | 4 | 15 | 158 | 45 | 206 | 1.05e-14 | 77.0 |
| MsG0680034369.01.T01 | AT4G16740 | 37.815 | 119 | 73 | 1 | 185 | 303 | 274 | 391 | 3.07e-21 | 95.9 |
| MsG0680034369.01.T01 | AT4G16740 | 28.767 | 219 | 133 | 6 | 12 | 210 | 21 | 236 | 9.86e-19 | 88.6 |
| MsG0680034369.01.T01 | AT3G25820 | 37.600 | 125 | 76 | 2 | 188 | 311 | 299 | 422 | 7.26e-21 | 95.5 |
| MsG0680034369.01.T01 | AT3G25820 | 30.952 | 168 | 86 | 4 | 15 | 158 | 45 | 206 | 8.78e-15 | 76.6 |
| MsG0680034369.01.T01 | AT4G16740 | 29.032 | 217 | 131 | 6 | 14 | 210 | 23 | 236 | 9.88e-19 | 88.2 |
| MsG0680034369.01.T01 | AT4G16740 | 39.130 | 69 | 42 | 0 | 184 | 252 | 273 | 341 | 2.55e-11 | 65.5 |
| MsG0680034369.01.T01 | AT4G16740 | 29.032 | 217 | 131 | 6 | 14 | 210 | 23 | 236 | 9.88e-19 | 88.2 |
| MsG0680034369.01.T01 | AT4G16740 | 39.130 | 69 | 42 | 0 | 184 | 252 | 273 | 341 | 2.55e-11 | 65.5 |
| MsG0680034369.01.T01 | AT1G66020 | 32.812 | 128 | 84 | 2 | 176 | 301 | 294 | 421 | 1.00e-17 | 85.9 |
| MsG0680034369.01.T01 | AT1G66020 | 29.885 | 174 | 98 | 4 | 17 | 169 | 56 | 226 | 1.92e-14 | 75.5 |
| MsG0680034369.01.T01 | AT3G25820 | 30.952 | 168 | 86 | 4 | 15 | 158 | 45 | 206 | 7.04e-15 | 76.6 |
| MsG0680034369.01.T01 | AT3G25820 | 44.615 | 65 | 36 | 0 | 188 | 252 | 299 | 363 | 1.49e-13 | 72.8 |
| MsG0680034369.01.T01 | AT3G25820 | 30.952 | 168 | 86 | 4 | 15 | 158 | 45 | 206 | 7.04e-15 | 76.6 |
| MsG0680034369.01.T01 | AT3G25820 | 44.615 | 65 | 36 | 0 | 188 | 252 | 299 | 363 | 1.49e-13 | 72.8 |
| MsG0680034369.01.T01 | AT1G79460 | 22.837 | 289 | 210 | 9 | 189 | 468 | 489 | 773 | 1.76e-14 | 76.6 |
Find 79 sgRNAs with CRISPR-Local
Find 182 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTCTCTTGCTGTGCTATTT+AGG | 0.103456 | 6:+86420690 | MsG0680034369.01.T01:CDS |
| TTCTCTTGCTGTGCTATTTA+GGG | 0.189824 | 6:+86420691 | MsG0680034369.01.T01:CDS |
| TTTCCTTGCTTGAGAATATT+GGG | 0.241792 | 6:-86421934 | None:intergenic |
| TACAAGAGTTATGTTCAAAA+TGG | 0.269625 | 6:+86420641 | MsG0680034369.01.T01:CDS |
| TCCTTATGCTTCAGAATCTA+TGG | 0.272455 | 6:+86420110 | MsG0680034369.01.T01:CDS |
| CTGCTATACATTGCAGGCTT+AGG | 0.276774 | 6:+86423404 | MsG0680034369.01.T01:CDS |
| AGACGAAATTAATCAAGTTT+TGG | 0.301364 | 6:+86420610 | MsG0680034369.01.T01:CDS |
| GTCATCAATGTATGATAAAA+TGG | 0.310334 | 6:-86421976 | None:intergenic |
| CAGATTTCCACCCTAGCGTT+TGG | 0.311610 | 6:+86420073 | MsG0680034369.01.T01:CDS |
| AGATTTCCACCCTAGCGTTT+GGG | 0.325288 | 6:+86420074 | MsG0680034369.01.T01:CDS |
| TGCAAAACCGATTTCTCATT+AGG | 0.335406 | 6:-86420039 | None:intergenic |
| TAATTGCTTGGAGGATCTTC+CGG | 0.335446 | 6:+86422326 | MsG0680034369.01.T01:CDS |
| TGAGGGAATATGATATGAAT+AGG | 0.340079 | 6:+86423606 | MsG0680034369.01.T01:CDS |
| GAGTAGTTGAATGTTGCTTT+TGG | 0.353926 | 6:+86421889 | MsG0680034369.01.T01:CDS |
| ATGCTGCTGCTATACATTGC+AGG | 0.354080 | 6:+86423398 | MsG0680034369.01.T01:CDS |
| TGTGCCGCAGTATTCATATC+AGG | 0.354426 | 6:-86420470 | None:intergenic |
| AGGACATGTTTCTTCGTACT+TGG | 0.361077 | 6:+86423574 | MsG0680034369.01.T01:CDS |
| GACATATATTAATGATTTGC+TGG | 0.369605 | 6:+86423811 | MsG0680034369.01.T01:CDS |
| CATCAATCCTAATGAGAAAT+CGG | 0.381109 | 6:+86420032 | MsG0680034369.01.T01:CDS |
| CGTACTTGGAATGTTATATG+AGG | 0.388936 | 6:+86423588 | MsG0680034369.01.T01:CDS |
| GATTGACTCAATATGTCGTT+TGG | 0.390339 | 6:+86420568 | MsG0680034369.01.T01:CDS |
| CGACAAAAGACATCTTTGAT+TGG | 0.390521 | 6:+86423350 | MsG0680034369.01.T01:CDS |
| GTTGCTTTATAAATCACTCT+TGG | 0.404999 | 6:+86422359 | MsG0680034369.01.T01:CDS |
| TGCATGTACTCCTCTGTTGT+TGG | 0.418606 | 6:-86423259 | None:intergenic |
| TAAAGCAACTTCATGTAATC+CGG | 0.421098 | 6:-86422345 | None:intergenic |
| ATAAATACTCAAATTTCTAA+AGG | 0.433133 | 6:-86423839 | None:intergenic |
| GACAAAAGACATCTTTGATT+GGG | 0.442878 | 6:+86423351 | MsG0680034369.01.T01:CDS |
| AAAAGAAAATTGACAACGCT+TGG | 0.444020 | 6:+86423651 | MsG0680034369.01.T01:CDS |
| TGCTATACATTGCAGGCTTA+GGG | 0.448464 | 6:+86423405 | MsG0680034369.01.T01:CDS |
| TAGGTGGGATATTAATTGCT+TGG | 0.452782 | 6:+86422314 | MsG0680034369.01.T01:intron |
| TACGACTTCTTACATTGGAA+TGG | 0.454510 | 6:+86423318 | MsG0680034369.01.T01:CDS |
| ATAGTTAGCATTCAGCCATC+TGG | 0.458951 | 6:-86423233 | None:intergenic |
| GATGACACATACGATGCATA+TGG | 0.460937 | 6:+86421993 | MsG0680034369.01.T01:CDS |
| ACGACTTCTTACATTGGAAT+GGG | 0.460983 | 6:+86423319 | MsG0680034369.01.T01:CDS |
| ATTGACTCAATATGTCGTTT+GGG | 0.473862 | 6:+86420569 | MsG0680034369.01.T01:CDS |
| GAGGGAATATGATATGAATA+GGG | 0.475500 | 6:+86423607 | MsG0680034369.01.T01:CDS |
| TTGCAAGAGAAGGACTCAAT+CGG | 0.484754 | 6:-86421534 | None:intergenic |
| CGCTTGGAAAGATATAAATC+AGG | 0.490061 | 6:+86423667 | MsG0680034369.01.T01:CDS |
| ATATTGGGGCTCAAAATATA+CGG | 0.495144 | 6:-86421919 | None:intergenic |
| TTCTGGTCACCTTGAGTCGA+TGG | 0.501829 | 6:+86421507 | MsG0680034369.01.T01:CDS |
| CTGTGCTATTTAGGGTGTTG+AGG | 0.502767 | 6:+86420699 | MsG0680034369.01.T01:CDS |
| TTGAGAACACACGTCAGAAT+AGG | 0.502783 | 6:-86423719 | None:intergenic |
| GAGCAAGAAATGAAGAAAGA+AGG | 0.510890 | 6:+86422399 | MsG0680034369.01.T01:CDS |
| CATGGACTTTACGTTTCACC+TGG | 0.512238 | 6:+86420725 | MsG0680034369.01.T01:CDS |
| ATACAGGTGGTGGAAGGAGT+TGG | 0.512387 | 6:+86421834 | MsG0680034369.01.T01:intron |
| ACCATAGATTCTGAAGCATA+AGG | 0.518574 | 6:-86420111 | None:intergenic |
| GCCTCACATATGATGGTTCA+TGG | 0.522278 | 6:+86421451 | MsG0680034369.01.T01:CDS |
| TAAGAAGTCGTAGCCAACAC+TGG | 0.522936 | 6:-86423307 | None:intergenic |
| GTGGGATATTAATTGCTTGG+AGG | 0.529634 | 6:+86422317 | MsG0680034369.01.T01:CDS |
| TGGCCTCACTCATATAAGCT+TGG | 0.531321 | 6:-86423213 | None:intergenic |
| TTCCTTGCTTGAGAATATTG+GGG | 0.534381 | 6:-86421933 | None:intergenic |
| AAACAGTTTGAGCAGAAAAG+AGG | 0.539017 | 6:+86423554 | MsG0680034369.01.T01:intron |
| TGCAAGAGAAGGACTCAATC+GGG | 0.546913 | 6:-86421533 | None:intergenic |
| AGCCCCAATATTCTCAAGCA+AGG | 0.547455 | 6:+86421931 | MsG0680034369.01.T01:CDS |
| CTTATATGAGTGAGGCCAGA+TGG | 0.549142 | 6:+86423218 | MsG0680034369.01.T01:CDS |
| TTTAGGGTGTTGAGGCAACA+TGG | 0.552007 | 6:+86420707 | MsG0680034369.01.T01:CDS |
| AAACATGGTCGTAGATGTTG+AGG | 0.553663 | 6:+86421408 | MsG0680034369.01.T01:intron |
| TTTACTTGTGTTGCAAGAGA+AGG | 0.558925 | 6:-86421544 | None:intergenic |
| ATCGGGTGGCCATCGACTCA+AGG | 0.563910 | 6:-86421516 | None:intergenic |
| GTACTTGGAATGTTATATGA+GGG | 0.567173 | 6:+86423589 | MsG0680034369.01.T01:CDS |
| GTATGAAGCCTCACATATGA+TGG | 0.567934 | 6:+86421444 | MsG0680034369.01.T01:CDS |
| ATCAAGTGGTTACCCAGTGT+TGG | 0.570889 | 6:+86423294 | MsG0680034369.01.T01:CDS |
| ATAGCACAGCAAGAGAATGA+AGG | 0.572946 | 6:-86420685 | None:intergenic |
| CTTTATATACAGGTGGTGGA+AGG | 0.574461 | 6:+86421828 | MsG0680034369.01.T01:intron |
| TTGGCTACGACTTCTTACAT+TGG | 0.586299 | 6:+86423313 | MsG0680034369.01.T01:CDS |
| ACTACTCTATCTCGTGCATA+CGG | 0.592321 | 6:-86421873 | None:intergenic |
| CACATATCAACAATATCAAG+TGG | 0.594145 | 6:+86423280 | MsG0680034369.01.T01:CDS |
| GATTTCCACCCTAGCGTTTG+GGG | 0.596026 | 6:+86420075 | MsG0680034369.01.T01:CDS |
| AATCTCCCCAAACGCTAGGG+TGG | 0.601357 | 6:-86420080 | None:intergenic |
| GATAACTACACACACTCTGA+CGG | 0.610210 | 6:+86423779 | MsG0680034369.01.T01:CDS |
| AAGAAGTCGTAGCCAACACT+GGG | 0.613680 | 6:-86423306 | None:intergenic |
| ACCATGAACCATCATATGTG+AGG | 0.634158 | 6:-86421452 | None:intergenic |
| AACATGGTCGTAGATGTTGA+GGG | 0.644425 | 6:+86421409 | MsG0680034369.01.T01:intron |
| AATCCAAGCTTATATGAGTG+AGG | 0.644710 | 6:+86423210 | MsG0680034369.01.T01:CDS |
| GGATGAAATTGTGTCAAGCG+AGG | 0.666273 | 6:+86423426 | MsG0680034369.01.T01:CDS |
| ACACACGTCAGAATAGGTAA+CGG | 0.688917 | 6:-86423713 | None:intergenic |
| AAGAGAAGGACTCAATCGGG+TGG | 0.695745 | 6:-86421530 | None:intergenic |
| GGAACCTGATATGAATACTG+CGG | 0.696636 | 6:+86420466 | MsG0680034369.01.T01:intron |
| TAACTATATACCAACAACAG+AGG | 0.703519 | 6:+86423249 | MsG0680034369.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAAAAGACTATTTA+AGG | - | Chr6:86420219-86420238 | None:intergenic | 10.0% |
| !! | CATATAAAATAAATGTTAAT+AGG | - | Chr6:86423164-86423183 | None:intergenic | 10.0% |
| !! | GAAAAAAAATTACATAAAAT+AGG | + | Chr6:86420973-86420992 | MsG0680034369.01.T01:intron | 10.0% |
| !! | TGATTATAAAGTAATATTAA+TGG | + | Chr6:86421087-86421106 | MsG0680034369.01.T01:intron | 10.0% |
| !!! | AATTTCATTAAAAATTTTTG+TGG | + | Chr6:86422557-86422576 | MsG0680034369.01.T01:intron | 10.0% |
| !!! | CATTTTTTATGTTTTTAATT+TGG | + | Chr6:86420779-86420798 | MsG0680034369.01.T01:intron | 10.0% |
| !!! | CTATTAACATTTATTTTATA+TGG | + | Chr6:86423162-86423181 | MsG0680034369.01.T01:intron | 10.0% |
| !!! | TAATTTTTATTATTGATAGT+AGG | - | Chr6:86422775-86422794 | None:intergenic | 10.0% |
| !!! | TTAATTACATAGTTTTTTTT+TGG | + | Chr6:86423131-86423150 | MsG0680034369.01.T01:intron | 10.0% |
| !! | ACAAATTGATAAACTAAAAA+AGG | + | Chr6:86420490-86420509 | MsG0680034369.01.T01:CDS | 15.0% |
| !! | TAATATGAATGTCTAAAAAA+TGG | + | Chr6:86420904-86420923 | MsG0680034369.01.T01:intron | 15.0% |
| !! | TATAAAGACAAAAATAGTAT+AGG | - | Chr6:86421815-86421834 | None:intergenic | 15.0% |
| !!! | AAACATTTTTACATCATTTT+AGG | + | Chr6:86422658-86422677 | MsG0680034369.01.T01:intron | 15.0% |
| !!! | ATTGTTGTTTAATATTATTG+TGG | + | Chr6:86421323-86421342 | MsG0680034369.01.T01:intron | 15.0% |
| !!! | TATTGTTTATCTTTAAAGTT+TGG | - | Chr6:86422108-86422127 | None:intergenic | 15.0% |
| !! | AAAAAAGGTTCTTACTTAAT+AGG | - | Chr6:86421127-86421146 | None:intergenic | 20.0% |
| !! | AATTGATAAACTAAAAAAGG+AGG | + | Chr6:86420493-86420512 | MsG0680034369.01.T01:CDS | 20.0% |
| !! | ACTATTTACCTTATACTATT+AGG | + | Chr6:86420361-86420380 | MsG0680034369.01.T01:intron | 20.0% |
| !! | AGTATAAGGTAAATAGTATA+AGG | - | Chr6:86420358-86420377 | None:intergenic | 20.0% |
| !! | ATATTATGAAAAGTGATTGA+AGG | + | Chr6:86420167-86420186 | MsG0680034369.01.T01:intron | 20.0% |
| !! | TATTATGAAAAGTGATTGAA+GGG | + | Chr6:86420168-86420187 | MsG0680034369.01.T01:intron | 20.0% |
| !! | TCGTAGAATTAATATTACAA+AGG | - | Chr6:86423038-86423057 | None:intergenic | 20.0% |
| !! | TGTAAAAAACTTATTATCCA+TGG | + | Chr6:86422796-86422815 | MsG0680034369.01.T01:intron | 20.0% |
| !!! | AAATTTTTGTGGTTATCAAA+TGG | + | Chr6:86422568-86422587 | MsG0680034369.01.T01:intron | 20.0% |
| !!! | AATCAAAATGATTTTTAGGT+GGG | + | Chr6:86422299-86422318 | MsG0680034369.01.T01:intron | 20.0% |
| !!! | AATTCTCTTTTTTCTAAAAG+TGG | - | Chr6:86420934-86420953 | None:intergenic | 20.0% |
| !!! | CTATTTTTGTCTTTATATAC+AGG | + | Chr6:86421818-86421837 | MsG0680034369.01.T01:intron | 20.0% |
| !!! | TATCTTGACATTTTAATTAC+TGG | + | Chr6:86423064-86423083 | MsG0680034369.01.T01:intron | 20.0% |
| !!! | TGAATTAGAACTTTTTACTA+AGG | + | Chr6:86422025-86422044 | MsG0680034369.01.T01:CDS | 20.0% |
| !!! | TGATTCTTTTAATAGAGTAA+TGG | + | Chr6:86422266-86422285 | MsG0680034369.01.T01:intron | 20.0% |
| !!! | TTGCAATCAAAATGATTTTT+AGG | + | Chr6:86422295-86422314 | MsG0680034369.01.T01:intron | 20.0% |
| ! | AAATCTTTAAATCAACAGCA+AGG | + | Chr6:86420138-86420157 | MsG0680034369.01.T01:intron | 25.0% |
| ! | AACTCAGTTAATAAAATCCA+TGG | - | Chr6:86422816-86422835 | None:intergenic | 25.0% |
| ! | AAGAAAAATGTATCATCATG+AGG | + | Chr6:86422873-86422892 | MsG0680034369.01.T01:intron | 25.0% |
| ! | AATATATCCATCTTCAATCT+TGG | + | Chr6:86422181-86422200 | MsG0680034369.01.T01:intron | 25.0% |
| ! | AATATTAATGGCATACATGT+AGG | + | Chr6:86421099-86421118 | MsG0680034369.01.T01:intron | 25.0% |
| ! | ATATAGGACCTAATAGTATA+AGG | - | Chr6:86420372-86420391 | None:intergenic | 25.0% |
| ! | ATGCAAGTAGAATTTCATTA+TGG | - | Chr6:86421654-86421673 | None:intergenic | 25.0% |
| ! | GAGAATAATTAAAAGAGATG+AGG | - | Chr6:86421026-86421045 | None:intergenic | 25.0% |
| ! | GGAATGAAATTTGATATTCT+AGG | + | Chr6:86420253-86420272 | MsG0680034369.01.T01:intron | 25.0% |
| ! | GTCATCAATGTATGATAAAA+TGG | - | Chr6:86421979-86421998 | None:intergenic | 25.0% |
| ! | TAATGAAATTCTACTTGCAT+TGG | + | Chr6:86421654-86421673 | MsG0680034369.01.T01:intron | 25.0% |
| ! | TACAAGAGTTATGTTCAAAA+TGG | + | Chr6:86420641-86420660 | MsG0680034369.01.T01:CDS | 25.0% |
| ! | TGCAAGTAGAATTTCATTAT+GGG | - | Chr6:86421653-86421672 | None:intergenic | 25.0% |
| ! | TTCAATCAAATAACTTCATG+AGG | - | Chr6:86422734-86422753 | None:intergenic | 25.0% |
| ! | TTGAGTAAAACAAATTAGAC+AGG | + | Chr6:86420810-86420829 | MsG0680034369.01.T01:intron | 25.0% |
| !! | AATAAGTTGAGATATATACC+AGG | - | Chr6:86420746-86420765 | None:intergenic | 25.0% |
| !! | AGACGAAATTAATCAAGTTT+TGG | + | Chr6:86420610-86420629 | MsG0680034369.01.T01:CDS | 25.0% |
| !! | ATGACACTTAATTGTTGTTA+TGG | - | Chr6:86420401-86420420 | None:intergenic | 25.0% |
| !! | GACATATATTAATGATTTGC+TGG | + | Chr6:86423811-86423830 | MsG0680034369.01.T01:CDS | 25.0% |
| !! | GTAATATTTGACTTTGTCAT+GGG | + | Chr6:86420875-86420894 | MsG0680034369.01.T01:intron | 25.0% |
| !! | TCTTTAATCTAGTTTAGAGT+TGG | + | Chr6:86422137-86422156 | MsG0680034369.01.T01:intron | 25.0% |
| !! | TTTTTACTAAGGCAATTGAA+AGG | + | Chr6:86422036-86422055 | MsG0680034369.01.T01:CDS | 25.0% |
| !! | TTTTTGTCTTTATATACAGG+TGG | + | Chr6:86421821-86421840 | MsG0680034369.01.T01:intron | 25.0% |
| !!! | AACTCTTACTTCTTTTAAGA+AGG | - | Chr6:86422445-86422464 | None:intergenic | 25.0% |
| !!! | ACTCTTACTTCTTTTAAGAA+GGG | - | Chr6:86422444-86422463 | None:intergenic | 25.0% |
| !!! | CAATCAAAATGATTTTTAGG+TGG | + | Chr6:86422298-86422317 | MsG0680034369.01.T01:intron | 25.0% |
| !!! | TGTATGTTTTGAATACATAC+AGG | + | Chr6:86420445-86420464 | MsG0680034369.01.T01:intron | 25.0% |
| AAAAATATTGGAAGAGGCTT+TGG | + | Chr6:86421477-86421496 | MsG0680034369.01.T01:CDS | 30.0% | |
| AAAAGAAAATTGACAACGCT+TGG | + | Chr6:86423651-86423670 | MsG0680034369.01.T01:CDS | 30.0% | |
| AAACTGAGTTCATATAACCA+TGG | - | Chr6:86422972-86422991 | None:intergenic | 30.0% | |
| ATATTGGGGCTCAAAATATA+CGG | - | Chr6:86421922-86421941 | None:intergenic | 30.0% | |
| CACATATCAACAATATCAAG+TGG | + | Chr6:86423280-86423299 | MsG0680034369.01.T01:CDS | 30.0% | |
| CATCAATCCTAATGAGAAAT+CGG | + | Chr6:86420032-86420051 | MsG0680034369.01.T01:CDS | 30.0% | |
| GACAAAAGACATCTTTGATT+GGG | + | Chr6:86423351-86423370 | MsG0680034369.01.T01:CDS | 30.0% | |
| GAGGGAATATGATATGAATA+GGG | + | Chr6:86423607-86423626 | MsG0680034369.01.T01:CDS | 30.0% | |
| GGTTCATGGTGAAAAAATAT+TGG | + | Chr6:86421465-86421484 | MsG0680034369.01.T01:CDS | 30.0% | |
| GTACTTGGAATGTTATATGA+GGG | + | Chr6:86423589-86423608 | MsG0680034369.01.T01:CDS | 30.0% | |
| TAAAGCAACTTCATGTAATC+CGG | - | Chr6:86422348-86422367 | None:intergenic | 30.0% | |
| TAACTATATACCAACAACAG+AGG | + | Chr6:86423249-86423268 | MsG0680034369.01.T01:CDS | 30.0% | |
| TGAGGGAATATGATATGAAT+AGG | + | Chr6:86423606-86423625 | MsG0680034369.01.T01:CDS | 30.0% | |
| TGCAAAAAACTTATTGTCCA+TGG | + | Chr6:86422952-86422971 | MsG0680034369.01.T01:intron | 30.0% | |
| TGGTGAAAAAATATTGGAAG+AGG | + | Chr6:86421471-86421490 | MsG0680034369.01.T01:CDS | 30.0% | |
| TTTCCTTGCTTGAGAATATT+GGG | - | Chr6:86421937-86421956 | None:intergenic | 30.0% | |
| ! | AAAGTATCACCATAATCACT+AGG | + | Chr6:86422693-86422712 | MsG0680034369.01.T01:intron | 30.0% |
| ! | ATTGACTCAATATGTCGTTT+GGG | + | Chr6:86420569-86420588 | MsG0680034369.01.T01:CDS | 30.0% |
| ! | CGTAATATTTGACTTTGTCA+TGG | + | Chr6:86420874-86420893 | MsG0680034369.01.T01:intron | 30.0% |
| ! | GTTGCTTTATAAATCACTCT+TGG | + | Chr6:86422359-86422378 | MsG0680034369.01.T01:CDS | 30.0% |
| ! | TCATGAGGATACATTTTTCT+TGG | - | Chr6:86422719-86422738 | None:intergenic | 30.0% |
| ! | TGGTTATCAAATGGAAGTAT+TGG | + | Chr6:86422577-86422596 | MsG0680034369.01.T01:intron | 30.0% |
| ! | TTTCTTTTGGCATTCTTGAA+TGG | - | Chr6:86423639-86423658 | None:intergenic | 30.0% |
| ! | TTTTCCTTGCTTGAGAATAT+TGG | - | Chr6:86421938-86421957 | None:intergenic | 30.0% |
| !! | AAGCGTTGTCAATTTTCTTT+TGG | - | Chr6:86423652-86423671 | None:intergenic | 30.0% |
| !! | CTCTTACTTCTTTTAAGAAG+GGG | - | Chr6:86422443-86422462 | None:intergenic | 30.0% |
| !! | GTGTTTCTGAAGTACAAAAA+AGG | - | Chr6:86421142-86421161 | None:intergenic | 30.0% |
| !!! | AATCAAGTTGACTTTTTCCA+AGG | - | Chr6:86420552-86420571 | None:intergenic | 30.0% |
| !!! | AGTAGTTGAATGTTGCTTTT+GGG | + | Chr6:86421890-86421909 | MsG0680034369.01.T01:CDS | 30.0% |
| !!! | ATCAAGTTGACTTTTTCCAA+GGG | - | Chr6:86420551-86420570 | None:intergenic | 30.0% |
| AAACAGTTTGAGCAGAAAAG+AGG | + | Chr6:86423554-86423573 | MsG0680034369.01.T01:intron | 35.0% | |
| AAGGAAACTTCAGTGAAACA+TGG | + | Chr6:86421393-86421412 | MsG0680034369.01.T01:intron | 35.0% | |
| AATCCAAGCTTATATGAGTG+AGG | + | Chr6:86423210-86423229 | MsG0680034369.01.T01:CDS | 35.0% | |
| AATCCTGGGCTAATATTAAG+TGG | - | Chr6:86420318-86420337 | None:intergenic | 35.0% | |
| AATGAGAGTAACTTGAATCC+TGG | - | Chr6:86420333-86420352 | None:intergenic | 35.0% | |
| ACGACTTCTTACATTGGAAT+GGG | + | Chr6:86423319-86423338 | MsG0680034369.01.T01:CDS | 35.0% | |
| AGATGTGTTCAACCAATTCA+AGG | + | Chr6:86421364-86421383 | MsG0680034369.01.T01:intron | 35.0% | |
| ATGAGAGTAACTTGAATCCT+GGG | - | Chr6:86420332-86420351 | None:intergenic | 35.0% | |
| CGACAAAAGACATCTTTGAT+TGG | + | Chr6:86423350-86423369 | MsG0680034369.01.T01:CDS | 35.0% | |
| CGCTTGGAAAGATATAAATC+AGG | + | Chr6:86423667-86423686 | MsG0680034369.01.T01:CDS | 35.0% | |
| CGTACTTGGAATGTTATATG+AGG | + | Chr6:86423588-86423607 | MsG0680034369.01.T01:CDS | 35.0% | |
| GAGCAAGAAATGAAGAAAGA+AGG | + | Chr6:86422399-86422418 | MsG0680034369.01.T01:CDS | 35.0% | |
| GTTGTTATGGCTCATCATAT+AGG | - | Chr6:86420388-86420407 | None:intergenic | 35.0% | |
| TACGACTTCTTACATTGGAA+TGG | + | Chr6:86423318-86423337 | MsG0680034369.01.T01:CDS | 35.0% | |
| TAGGTGGGATATTAATTGCT+TGG | + | Chr6:86422314-86422333 | MsG0680034369.01.T01:intron | 35.0% | |
| TCCTTATGCTTCAGAATCTA+TGG | + | Chr6:86420110-86420129 | MsG0680034369.01.T01:CDS | 35.0% | |
| TTCCTTGCTTGAGAATATTG+GGG | - | Chr6:86421936-86421955 | None:intergenic | 35.0% | |
| TTGTCTTTATATACAGGTGG+TGG | + | Chr6:86421824-86421843 | MsG0680034369.01.T01:intron | 35.0% | |
| TTTACTTGTGTTGCAAGAGA+AGG | - | Chr6:86421547-86421566 | None:intergenic | 35.0% | |
| ! | GATTGACTCAATATGTCGTT+TGG | + | Chr6:86420568-86420587 | MsG0680034369.01.T01:CDS | 35.0% |
| ! | GCAGCAGCATTAACAATTTT+TGG | - | Chr6:86423388-86423407 | None:intergenic | 35.0% |
| ! | TCTACTTGCATTGGCAAAAT+TGG | + | Chr6:86421663-86421682 | MsG0680034369.01.T01:intron | 35.0% |
| ! | TGCAAAACCGATTTCTCATT+AGG | - | Chr6:86420042-86420061 | None:intergenic | 35.0% |
| ! | TTCCAAATTCCTTTTGATGC+AGG | - | Chr6:86421708-86421727 | None:intergenic | 35.0% |
| ! | TTTTCTTGGCCTAGTGATTA+TGG | - | Chr6:86422705-86422724 | None:intergenic | 35.0% |
| !! | ACCATAGATTCTGAAGCATA+AGG | - | Chr6:86420114-86420133 | None:intergenic | 35.0% |
| !! | ATTCTCTTGCTGTGCTATTT+AGG | + | Chr6:86420690-86420709 | MsG0680034369.01.T01:CDS | 35.0% |
| !! | TTCTCTTGCTGTGCTATTTA+GGG | + | Chr6:86420691-86420710 | MsG0680034369.01.T01:CDS | 35.0% |
| !! | TTCTTTTAAGAAGGGGTCAA+GGG | - | Chr6:86422436-86422455 | None:intergenic | 35.0% |
| !!! | GAGTAGTTGAATGTTGCTTT+TGG | + | Chr6:86421889-86421908 | MsG0680034369.01.T01:CDS | 35.0% |
| AAAAAATCTCCCCAAACGCT+AGG | - | Chr6:86420087-86420106 | None:intergenic | 40.0% | |
| AAAAATCTCCCCAAACGCTA+GGG | - | Chr6:86420086-86420105 | None:intergenic | 40.0% | |
| AAACATGGTCGTAGATGTTG+AGG | + | Chr6:86421408-86421427 | MsG0680034369.01.T01:intron | 40.0% | |
| AACATGGTCGTAGATGTTGA+GGG | + | Chr6:86421409-86421428 | MsG0680034369.01.T01:intron | 40.0% | |
| ACACACGTCAGAATAGGTAA+CGG | - | Chr6:86423716-86423735 | None:intergenic | 40.0% | |
| ACCATGAACCATCATATGTG+AGG | - | Chr6:86421455-86421474 | None:intergenic | 40.0% | |
| ACTACTCTATCTCGTGCATA+CGG | - | Chr6:86421876-86421895 | None:intergenic | 40.0% | |
| AGCCTGCATCAAAAGGAATT+TGG | + | Chr6:86421703-86421722 | MsG0680034369.01.T01:intron | 40.0% | |
| AGGACATGTTTCTTCGTACT+TGG | + | Chr6:86423574-86423593 | MsG0680034369.01.T01:CDS | 40.0% | |
| ATAGCACAGCAAGAGAATGA+AGG | - | Chr6:86420688-86420707 | None:intergenic | 40.0% | |
| ATAGTTAGCATTCAGCCATC+TGG | - | Chr6:86423236-86423255 | None:intergenic | 40.0% | |
| CAACCACTTAATATTAGCCC+AGG | + | Chr6:86420312-86420331 | MsG0680034369.01.T01:intron | 40.0% | |
| CTCAAAAACAGAGAAACCCT+TGG | + | Chr6:86420532-86420551 | MsG0680034369.01.T01:CDS | 40.0% | |
| CTGGGCTAATATTAAGTGGT+TGG | - | Chr6:86420314-86420333 | None:intergenic | 40.0% | |
| GATAACTACACACACTCTGA+CGG | + | Chr6:86423779-86423798 | MsG0680034369.01.T01:CDS | 40.0% | |
| GATGACACATACGATGCATA+TGG | + | Chr6:86421993-86422012 | MsG0680034369.01.T01:CDS | 40.0% | |
| GGAACCTGATATGAATACTG+CGG | + | Chr6:86420466-86420485 | MsG0680034369.01.T01:intron | 40.0% | |
| GGATGAATCTTGCTCATAGA+TGG | - | Chr6:86421632-86421651 | None:intergenic | 40.0% | |
| GTATGAAGCCTCACATATGA+TGG | + | Chr6:86421444-86421463 | MsG0680034369.01.T01:CDS | 40.0% | |
| GTGGGATATTAATTGCTTGG+AGG | + | Chr6:86422317-86422336 | MsG0680034369.01.T01:CDS | 40.0% | |
| TAATTGCTTGGAGGATCTTC+CGG | + | Chr6:86422326-86422345 | MsG0680034369.01.T01:CDS | 40.0% | |
| TGCTATACATTGCAGGCTTA+GGG | + | Chr6:86423405-86423424 | MsG0680034369.01.T01:CDS | 40.0% | |
| TTAGCGACCAAGATTGAAGA+TGG | - | Chr6:86422191-86422210 | None:intergenic | 40.0% | |
| TTGAGAACACACGTCAGAAT+AGG | - | Chr6:86423722-86423741 | None:intergenic | 40.0% | |
| TTGCAAGAGAAGGACTCAAT+CGG | - | Chr6:86421537-86421556 | None:intergenic | 40.0% | |
| TTGGCTACGACTTCTTACAT+TGG | + | Chr6:86423313-86423332 | MsG0680034369.01.T01:CDS | 40.0% | |
| ! | ATTCCTTTTGATGCAGGCTT+TGG | - | Chr6:86421702-86421721 | None:intergenic | 40.0% |
| !! | CAATCTCTCGCGTTTTATTG+AGG | + | Chr6:86423739-86423758 | MsG0680034369.01.T01:CDS | 40.0% |
| !! | CTTCTTTTAAGAAGGGGTCA+AGG | - | Chr6:86422437-86422456 | None:intergenic | 40.0% |
| !! | CTTTATATACAGGTGGTGGA+AGG | + | Chr6:86421828-86421847 | MsG0680034369.01.T01:intron | 40.0% |
| AACCAATTCAAGGACGAGCA+AGG | + | Chr6:86421374-86421393 | MsG0680034369.01.T01:intron | 45.0% | |
| AAGAAGTCGTAGCCAACACT+GGG | - | Chr6:86423309-86423328 | None:intergenic | 45.0% | |
| AGATTTCCACCCTAGCGTTT+GGG | + | Chr6:86420074-86420093 | MsG0680034369.01.T01:CDS | 45.0% | |
| AGCCCCAATATTCTCAAGCA+AGG | + | Chr6:86421931-86421950 | MsG0680034369.01.T01:CDS | 45.0% | |
| ATCAAGTGGTTACCCAGTGT+TGG | + | Chr6:86423294-86423313 | MsG0680034369.01.T01:CDS | 45.0% | |
| ATGCTGCTGCTATACATTGC+AGG | + | Chr6:86423398-86423417 | MsG0680034369.01.T01:CDS | 45.0% | |
| CAAAAACTTGCCTAGGCTAG+TGG | + | Chr6:86421591-86421610 | MsG0680034369.01.T01:intron | 45.0% | |
| CATGGACTTTACGTTTCACC+TGG | + | Chr6:86420725-86420744 | MsG0680034369.01.T01:CDS | 45.0% | |
| CTGCTATACATTGCAGGCTT+AGG | + | Chr6:86423404-86423423 | MsG0680034369.01.T01:CDS | 45.0% | |
| CTTATATGAGTGAGGCCAGA+TGG | + | Chr6:86423218-86423237 | MsG0680034369.01.T01:CDS | 45.0% | |
| GCCTCACATATGATGGTTCA+TGG | + | Chr6:86421451-86421470 | MsG0680034369.01.T01:CDS | 45.0% | |
| GGATGAAATTGTGTCAAGCG+AGG | + | Chr6:86423426-86423445 | MsG0680034369.01.T01:CDS | 45.0% | |
| TAAGAAGTCGTAGCCAACAC+TGG | - | Chr6:86423310-86423329 | None:intergenic | 45.0% | |
| TGCAAGAGAAGGACTCAATC+GGG | - | Chr6:86421536-86421555 | None:intergenic | 45.0% | |
| TGCATGTACTCCTCTGTTGT+TGG | - | Chr6:86423262-86423281 | None:intergenic | 45.0% | |
| TGGCCTCACTCATATAAGCT+TGG | - | Chr6:86423216-86423235 | None:intergenic | 45.0% | |
| TGTGCCGCAGTATTCATATC+AGG | - | Chr6:86420473-86420492 | None:intergenic | 45.0% | |
| TTCCTTGCTCGTCCTTGAAT+TGG | - | Chr6:86421379-86421398 | None:intergenic | 45.0% | |
| ! | CTAGCCTAGGCAAGTTTTTG+CGG | - | Chr6:86421591-86421610 | None:intergenic | 45.0% |
| ! | TAACTTCTTGCCACTAGCCT+AGG | - | Chr6:86421604-86421623 | None:intergenic | 45.0% |
| !! | CTGTGCTATTTAGGGTGTTG+AGG | + | Chr6:86420699-86420718 | MsG0680034369.01.T01:CDS | 45.0% |
| !! | TTTAGGGTGTTGAGGCAACA+TGG | + | Chr6:86420707-86420726 | MsG0680034369.01.T01:CDS | 45.0% |
| !!! | GAGGCTTTGGCTTTTACTTC+TGG | + | Chr6:86421490-86421509 | MsG0680034369.01.T01:CDS | 45.0% |
| !!! | ATTTTATAATAATAAAAGAT+AGG | + | Chr6:86420951-86420970 | MsG0680034369.01.T01:intron | 5.0% |
| !!! | TTTTTTTTTTTTTTATCAAT+AGG | + | Chr6:86420232-86420251 | MsG0680034369.01.T01:intron | 5.0% |
| AAGAGAAGGACTCAATCGGG+TGG | - | Chr6:86421533-86421552 | None:intergenic | 50.0% | |
| CAGATTTCCACCCTAGCGTT+TGG | + | Chr6:86420073-86420092 | MsG0680034369.01.T01:CDS | 50.0% | |
| CTCTCCGCAAAAACTTGCCT+AGG | + | Chr6:86421584-86421603 | MsG0680034369.01.T01:intron | 50.0% | |
| GATTTCCACCCTAGCGTTTG+GGG | + | Chr6:86420075-86420094 | MsG0680034369.01.T01:CDS | 50.0% | |
| GCTCCAAAGCCTGCATCAAA+AGG | + | Chr6:86421696-86421715 | MsG0680034369.01.T01:intron | 50.0% | |
| TTCTGGTCACCTTGAGTCGA+TGG | + | Chr6:86421507-86421526 | MsG0680034369.01.T01:CDS | 50.0% | |
| !! | ATACAGGTGGTGGAAGGAGT+TGG | + | Chr6:86421834-86421853 | MsG0680034369.01.T01:intron | 50.0% |
| AATCTCCCCAAACGCTAGGG+TGG | - | Chr6:86420083-86420102 | None:intergenic | 55.0% | |
| !! | ATCGGGTGGCCATCGACTCA+AGG | - | Chr6:86421519-86421538 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr6 | gene | 86420015 | 86423853 | 86420015 | ID=MsG0680034369.01;Name=MsG0680034369.01 |
| Chr6 | mRNA | 86420015 | 86423853 | 86420015 | ID=MsG0680034369.01.T01;Parent=MsG0680034369.01;Name=MsG0680034369.01.T01;_AED=0.16;_eAED=0.16;_QI=0|0|0|1|1|1|7|0|478 |
| Chr6 | exon | 86420015 | 86420131 | 86420015 | ID=MsG0680034369.01.T01:exon:13125;Parent=MsG0680034369.01.T01 |
| Chr6 | exon | 86420467 | 86420746 | 86420467 | ID=MsG0680034369.01.T01:exon:13126;Parent=MsG0680034369.01.T01 |
| Chr6 | exon | 86421422 | 86421561 | 86421422 | ID=MsG0680034369.01.T01:exon:13127;Parent=MsG0680034369.01.T01 |
| Chr6 | exon | 86421840 | 86422057 | 86421840 | ID=MsG0680034369.01.T01:exon:13128;Parent=MsG0680034369.01.T01 |
| Chr6 | exon | 86422317 | 86422455 | 86422317 | ID=MsG0680034369.01.T01:exon:13129;Parent=MsG0680034369.01.T01 |
| Chr6 | exon | 86423199 | 86423447 | 86423199 | ID=MsG0680034369.01.T01:exon:13130;Parent=MsG0680034369.01.T01 |
| Chr6 | exon | 86423560 | 86423853 | 86423560 | ID=MsG0680034369.01.T01:exon:13131;Parent=MsG0680034369.01.T01 |
| Chr6 | CDS | 86420015 | 86420131 | 86420015 | ID=MsG0680034369.01.T01:cds;Parent=MsG0680034369.01.T01 |
| Chr6 | CDS | 86420467 | 86420746 | 86420467 | ID=MsG0680034369.01.T01:cds;Parent=MsG0680034369.01.T01 |
| Chr6 | CDS | 86421422 | 86421561 | 86421422 | ID=MsG0680034369.01.T01:cds;Parent=MsG0680034369.01.T01 |
| Chr6 | CDS | 86421840 | 86422057 | 86421840 | ID=MsG0680034369.01.T01:cds;Parent=MsG0680034369.01.T01 |
| Chr6 | CDS | 86422317 | 86422455 | 86422317 | ID=MsG0680034369.01.T01:cds;Parent=MsG0680034369.01.T01 |
| Chr6 | CDS | 86423199 | 86423447 | 86423199 | ID=MsG0680034369.01.T01:cds;Parent=MsG0680034369.01.T01 |
| Chr6 | CDS | 86423560 | 86423853 | 86423560 | ID=MsG0680034369.01.T01:cds;Parent=MsG0680034369.01.T01 |
| Gene Sequence |
| Protein sequence |
