Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780036377.01.T01 | XP_003621337.2 | 86.216 | 370 | 30 | 4 | 1 | 351 | 25 | 392 | 0 | 639 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780036377.01.T01 | P93324 | 62.634 | 372 | 114 | 5 | 2 | 351 | 4 | 372 | 4.78E-163 | 463 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780036377.01.T01 | G7L365 | 86.216 | 370 | 30 | 4 | 1 | 351 | 1 | 368 | 0.0 | 636 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0180002808.01 | MsG0780036377.01 | 0.812883 | 3.388376e-51 | 2.179745e-48 |
| MsG0180004942.01 | MsG0780036377.01 | 0.824797 | 6.644578e-54 | 5.947217e-51 |
| MsG0380013891.01 | MsG0780036377.01 | -0.801057 | 1.077308e-48 | 5.095961e-46 |
| MsG0680031464.01 | MsG0780036377.01 | 0.808726 | 2.688408e-50 | 1.548666e-47 |
| MsG0480019028.01 | MsG0780036377.01 | -0.810326 | 1.218787e-50 | 7.324801e-48 |
| MsG0480020051.01 | MsG0780036377.01 | -0.806625 | 7.513233e-50 | 4.097234e-47 |
| MsG0480023322.01 | MsG0780036377.01 | 0.814421 | 1.553900e-51 | 1.042221e-48 |
| MsG0580025023.01 | MsG0780036377.01 | 0.819090 | 1.393593e-52 | 1.062136e-49 |
| MsG0380015323.01 | MsG0780036377.01 | 0.811125 | 8.186581e-51 | 5.025807e-48 |
| MsG0380016372.01 | MsG0780036377.01 | 0.808141 | 3.583142e-50 | 2.032861e-47 |
| MsG0580028510.01 | MsG0780036377.01 | 0.810875 | 9.271427e-51 | 5.654659e-48 |
| MsG0580028565.01 | MsG0780036377.01 | 0.823958 | 1.046278e-53 | 9.142605e-51 |
| MsG0280008226.01 | MsG0780036377.01 | 0.821672 | 3.564824e-53 | 2.919353e-50 |
| MsG0280008495.01 | MsG0780036377.01 | 0.801077 | 1.067212e-48 | 5.050684e-46 |
| MsG0280009526.01 | MsG0780036377.01 | 0.801038 | 1.087086e-48 | 5.139710e-46 |
| MsG0780036370.01 | MsG0780036377.01 | 0.849651 | 2.819798e-60 | 5.382588e-57 |
| MsG0780036377.01 | MsG0780040808.01 | 0.813926 | 1.998235e-51 | 1.322284e-48 |
| MsG0780036377.01 | MsG0880044688.01 | 0.803640 | 3.165486e-49 | 1.599004e-46 |
| MsG0780036377.01 | MsG0880045645.01 | 0.816891 | 4.376027e-52 | 3.139507e-49 |
| MsG0780036377.01 | MsG0880047450.01 | 0.809439 | 1.891127e-50 | 1.110372e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780036377.01.T01 | MTR_7g012040 | 86.216 | 370 | 30 | 4 | 1 | 351 | 1 | 368 | 0.0 | 636 |
| MsG0780036377.01.T01 | MTR_7g012020 | 73.784 | 370 | 77 | 3 | 1 | 351 | 1 | 369 | 0.0 | 560 |
| MsG0780036377.01.T01 | MTR_7g011900 | 73.514 | 370 | 76 | 4 | 2 | 351 | 3 | 370 | 0.0 | 559 |
| MsG0780036377.01.T01 | MTR_7g012090 | 72.995 | 374 | 76 | 5 | 2 | 351 | 3 | 375 | 0.0 | 540 |
| MsG0780036377.01.T01 | MTR_7g011990 | 73.497 | 366 | 80 | 3 | 2 | 351 | 3 | 367 | 0.0 | 538 |
| MsG0780036377.01.T01 | MTR_7g012070 | 71.658 | 374 | 81 | 5 | 2 | 351 | 3 | 375 | 0.0 | 536 |
| MsG0780036377.01.T01 | MTR_2g055940 | 65.616 | 349 | 102 | 2 | 21 | 351 | 15 | 363 | 4.80e-168 | 473 |
| MsG0780036377.01.T01 | MTR_1g096310 | 62.366 | 372 | 115 | 5 | 2 | 351 | 4 | 372 | 5.79e-164 | 462 |
| MsG0780036377.01.T01 | MTR_7g012020 | 76.449 | 276 | 45 | 3 | 1 | 257 | 1 | 275 | 3.71e-149 | 422 |
| MsG0780036377.01.T01 | MTR_7g012020 | 77.075 | 253 | 38 | 3 | 1 | 234 | 1 | 252 | 5.17e-136 | 387 |
| MsG0780036377.01.T01 | MTR_1g036460 | 49.865 | 371 | 160 | 8 | 4 | 351 | 3 | 370 | 5.58e-124 | 361 |
| MsG0780036377.01.T01 | MTR_3g021430 | 54.494 | 356 | 140 | 6 | 16 | 351 | 4 | 357 | 7.66e-124 | 360 |
| MsG0780036377.01.T01 | MTR_1g036490 | 48.787 | 371 | 164 | 7 | 4 | 351 | 3 | 370 | 2.96e-123 | 359 |
| MsG0780036377.01.T01 | MTR_3g021440 | 51.233 | 365 | 152 | 8 | 10 | 351 | 9 | 370 | 8.70e-120 | 350 |
| MsG0780036377.01.T01 | MTR_1g036510 | 50.284 | 352 | 153 | 5 | 22 | 351 | 33 | 384 | 6.74e-118 | 346 |
| MsG0780036377.01.T01 | MTR_3g092900 | 48.315 | 356 | 162 | 7 | 16 | 351 | 10 | 363 | 5.55e-108 | 320 |
| MsG0780036377.01.T01 | MTR_5g098170 | 42.105 | 361 | 186 | 7 | 12 | 351 | 5 | 363 | 5.64e-90 | 274 |
| MsG0780036377.01.T01 | MTR_7g118300 | 40.761 | 368 | 193 | 10 | 4 | 351 | 13 | 375 | 1.50e-83 | 258 |
| MsG0780036377.01.T01 | MTR_7g118320 | 39.276 | 359 | 186 | 10 | 19 | 351 | 10 | 362 | 6.22e-79 | 246 |
| MsG0780036377.01.T01 | MTR_0591s0010 | 39.776 | 357 | 187 | 10 | 19 | 351 | 25 | 377 | 3.30e-78 | 244 |
| MsG0780036377.01.T01 | MTR_1g036510 | 50.394 | 254 | 105 | 4 | 22 | 254 | 33 | 286 | 4.51e-78 | 241 |
| MsG0780036377.01.T01 | MTR_1g050220 | 41.896 | 327 | 121 | 6 | 26 | 331 | 6 | 284 | 3.64e-77 | 239 |
| MsG0780036377.01.T01 | MTR_8g068690 | 38.592 | 355 | 194 | 9 | 19 | 351 | 24 | 376 | 8.39e-74 | 233 |
| MsG0780036377.01.T01 | MTR_8g068870 | 38.279 | 337 | 187 | 6 | 35 | 351 | 28 | 363 | 3.35e-73 | 231 |
| MsG0780036377.01.T01 | MTR_8g068750 | 37.183 | 355 | 199 | 9 | 19 | 351 | 25 | 377 | 3.85e-73 | 231 |
| MsG0780036377.01.T01 | MTR_8g068570 | 39.935 | 308 | 163 | 8 | 19 | 318 | 25 | 318 | 4.92e-66 | 211 |
| MsG0780036377.01.T01 | MTR_8g024160 | 43.893 | 262 | 130 | 5 | 105 | 351 | 69 | 328 | 7.42e-66 | 211 |
| MsG0780036377.01.T01 | MTR_1g036510 | 48.276 | 232 | 99 | 4 | 22 | 232 | 33 | 264 | 1.06e-65 | 209 |
| MsG0780036377.01.T01 | MTR_6g078850 | 36.932 | 352 | 199 | 8 | 21 | 350 | 32 | 382 | 3.84e-62 | 206 |
| MsG0780036377.01.T01 | MTR_8g068730 | 33.803 | 355 | 179 | 11 | 19 | 351 | 25 | 345 | 1.39e-55 | 185 |
| MsG0780036377.01.T01 | MTR_3g096050 | 35.311 | 354 | 189 | 10 | 26 | 351 | 17 | 358 | 1.63e-55 | 185 |
| MsG0780036377.01.T01 | MTR_2g072790 | 33.041 | 342 | 199 | 8 | 14 | 332 | 2 | 336 | 3.91e-55 | 184 |
| MsG0780036377.01.T01 | MTR_6g060290 | 54.645 | 183 | 49 | 5 | 2 | 165 | 3 | 170 | 1.23e-54 | 177 |
| MsG0780036377.01.T01 | MTR_3g096070 | 35.474 | 327 | 183 | 9 | 26 | 343 | 17 | 324 | 2.02e-52 | 177 |
| MsG0780036377.01.T01 | MTR_8g068690 | 37.891 | 256 | 137 | 7 | 19 | 253 | 24 | 278 | 7.83e-49 | 166 |
| MsG0780036377.01.T01 | MTR_0017s0100 | 31.267 | 371 | 217 | 14 | 11 | 350 | 4 | 367 | 1.33e-48 | 167 |
| MsG0780036377.01.T01 | MTR_3g083620 | 34.069 | 317 | 183 | 8 | 39 | 336 | 38 | 347 | 6.61e-47 | 163 |
| MsG0780036377.01.T01 | MTR_0079s0070 | 34.375 | 320 | 179 | 13 | 41 | 337 | 10 | 321 | 7.70e-46 | 159 |
| MsG0780036377.01.T01 | MTR_4g038440 | 34.268 | 321 | 180 | 13 | 40 | 337 | 43 | 355 | 1.93e-45 | 159 |
| MsG0780036377.01.T01 | MTR_8g068600 | 34.646 | 254 | 137 | 7 | 46 | 271 | 27 | 279 | 1.68e-40 | 144 |
| MsG0780036377.01.T01 | MTR_3g096050 | 36.255 | 251 | 131 | 6 | 26 | 254 | 17 | 260 | 3.00e-39 | 140 |
| MsG0780036377.01.T01 | MTR_1g076940 | 29.341 | 334 | 208 | 8 | 40 | 350 | 32 | 360 | 1.06e-38 | 141 |
| MsG0780036377.01.T01 | MTR_8g068740 | 32.963 | 270 | 127 | 9 | 19 | 267 | 25 | 261 | 3.39e-38 | 138 |
| MsG0780036377.01.T01 | MTR_5g074600 | 32.743 | 226 | 146 | 4 | 130 | 350 | 134 | 358 | 1.25e-37 | 138 |
| MsG0780036377.01.T01 | MTR_5g074680 | 35.047 | 214 | 133 | 4 | 142 | 350 | 147 | 359 | 4.33e-37 | 137 |
| MsG0780036377.01.T01 | MTR_7g024520 | 33.182 | 220 | 135 | 3 | 138 | 349 | 130 | 345 | 1.32e-35 | 133 |
| MsG0780036377.01.T01 | MTR_5g074580 | 34.272 | 213 | 131 | 4 | 142 | 349 | 147 | 355 | 4.28e-35 | 132 |
| MsG0780036377.01.T01 | MTR_4g088340 | 33.990 | 203 | 130 | 2 | 151 | 350 | 131 | 332 | 1.38e-34 | 129 |
| MsG0780036377.01.T01 | MTR_5g074540 | 33.962 | 212 | 135 | 3 | 130 | 336 | 116 | 327 | 1.61e-34 | 129 |
| MsG0780036377.01.T01 | MTR_4g088345 | 38.690 | 168 | 99 | 2 | 186 | 350 | 189 | 355 | 4.90e-34 | 129 |
| MsG0780036377.01.T01 | MTR_8g068620 | 51.376 | 109 | 53 | 0 | 145 | 253 | 2 | 110 | 6.55e-34 | 121 |
| MsG0780036377.01.T01 | MTR_7g014570 | 27.439 | 328 | 211 | 8 | 41 | 350 | 33 | 351 | 1.06e-33 | 127 |
| MsG0780036377.01.T01 | MTR_7g014510 | 29.646 | 226 | 152 | 4 | 129 | 350 | 134 | 356 | 1.38e-33 | 127 |
| MsG0780036377.01.T01 | MTR_7g024500 | 32.843 | 204 | 130 | 2 | 149 | 349 | 146 | 345 | 4.76e-33 | 126 |
| MsG0780036377.01.T01 | MTR_4g079160 | 35.789 | 190 | 118 | 2 | 147 | 332 | 148 | 337 | 4.72e-32 | 123 |
| MsG0780036377.01.T01 | MTR_4g088200 | 29.755 | 326 | 204 | 8 | 34 | 337 | 26 | 348 | 7.43e-32 | 123 |
| MsG0780036377.01.T01 | MTR_5g074610 | 35.714 | 168 | 104 | 2 | 186 | 350 | 159 | 325 | 2.02e-31 | 121 |
| MsG0780036377.01.T01 | MTR_4g033015 | 30.816 | 331 | 204 | 9 | 40 | 346 | 32 | 361 | 9.96e-30 | 117 |
| MsG0780036377.01.T01 | MTR_4g033200 | 30.514 | 331 | 205 | 9 | 40 | 346 | 32 | 361 | 8.78e-29 | 114 |
| MsG0780036377.01.T01 | MTR_4g033150 | 29.607 | 331 | 208 | 9 | 40 | 346 | 32 | 361 | 1.45e-27 | 111 |
| MsG0780036377.01.T01 | MTR_4g038440 | 33.047 | 233 | 132 | 8 | 41 | 254 | 44 | 271 | 1.07e-26 | 107 |
| MsG0780036377.01.T01 | MTR_4g088190 | 29.052 | 327 | 208 | 7 | 34 | 337 | 26 | 351 | 1.54e-25 | 105 |
| MsG0780036377.01.T01 | MTR_1g076930 | 29.167 | 240 | 139 | 8 | 38 | 254 | 7 | 238 | 2.20e-24 | 100 |
| MsG0780036377.01.T01 | MTR_4g033170 | 28.740 | 254 | 157 | 7 | 40 | 275 | 32 | 279 | 1.17e-21 | 94.7 |
| MsG0780036377.01.T01 | MTR_4g033085 | 28.458 | 253 | 157 | 7 | 40 | 274 | 32 | 278 | 2.58e-20 | 91.3 |
| MsG0780036377.01.T01 | MTR_6g060280 | 66.102 | 59 | 14 | 2 | 206 | 259 | 2 | 59 | 1.40e-16 | 73.9 |
| MsG0780036377.01.T01 | MTR_8g068760 | 39.000 | 100 | 59 | 2 | 253 | 351 | 135 | 233 | 1.15e-15 | 75.9 |
| MsG0780036377.01.T01 | MTR_8g068580 | 41.304 | 92 | 52 | 2 | 261 | 351 | 43 | 133 | 6.18e-12 | 62.8 |
| MsG0780036377.01.T01 | MTR_0794s0020 | 26.484 | 219 | 141 | 7 | 40 | 239 | 32 | 249 | 2.01e-11 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780036377.01.T01 | AT5G54160 | 46.328 | 354 | 170 | 6 | 16 | 351 | 10 | 361 | 4.39e-103 | 308 |
| MsG0780036377.01.T01 | AT1G77520 | 39.831 | 354 | 184 | 9 | 25 | 351 | 30 | 381 | 1.28e-81 | 253 |
| MsG0780036377.01.T01 | AT1G51990 | 36.723 | 354 | 196 | 5 | 21 | 350 | 12 | 361 | 1.02e-80 | 251 |
| MsG0780036377.01.T01 | AT1G51990 | 36.441 | 354 | 197 | 5 | 21 | 350 | 12 | 361 | 1.27e-79 | 248 |
| MsG0780036377.01.T01 | AT1G63140 | 38.827 | 358 | 190 | 10 | 21 | 351 | 26 | 381 | 7.38e-71 | 226 |
| MsG0780036377.01.T01 | AT1G63140 | 38.083 | 386 | 199 | 12 | 4 | 351 | 18 | 401 | 1.19e-70 | 226 |
| MsG0780036377.01.T01 | AT1G33030 | 37.216 | 352 | 196 | 8 | 21 | 351 | 3 | 350 | 8.19e-68 | 217 |
| MsG0780036377.01.T01 | AT5G53810 | 38.123 | 341 | 183 | 8 | 38 | 351 | 39 | 378 | 2.13e-67 | 217 |
| MsG0780036377.01.T01 | AT1G21100 | 39.155 | 355 | 182 | 12 | 16 | 341 | 15 | 364 | 5.50e-67 | 216 |
| MsG0780036377.01.T01 | AT1G77530 | 37.288 | 354 | 193 | 7 | 25 | 351 | 30 | 381 | 8.66e-67 | 215 |
| MsG0780036377.01.T01 | AT1G21130 | 39.216 | 357 | 183 | 12 | 14 | 341 | 13 | 364 | 2.17e-66 | 214 |
| MsG0780036377.01.T01 | AT1G21110 | 38.873 | 355 | 183 | 12 | 16 | 341 | 15 | 364 | 5.35e-65 | 210 |
| MsG0780036377.01.T01 | AT1G21120 | 38.592 | 355 | 184 | 12 | 16 | 341 | 15 | 364 | 3.80e-64 | 208 |
| MsG0780036377.01.T01 | AT1G76790 | 37.466 | 371 | 190 | 11 | 15 | 351 | 3 | 365 | 4.41e-64 | 208 |
| MsG0780036377.01.T01 | AT1G21120 | 38.592 | 355 | 184 | 12 | 16 | 341 | 63 | 412 | 1.47e-63 | 208 |
| MsG0780036377.01.T01 | AT1G62900 | 44.175 | 206 | 112 | 3 | 148 | 351 | 1 | 205 | 1.50e-55 | 181 |
| MsG0780036377.01.T01 | AT5G37170 | 37.500 | 304 | 163 | 8 | 57 | 351 | 49 | 334 | 1.04e-53 | 180 |
| MsG0780036377.01.T01 | AT3G53140 | 31.832 | 333 | 194 | 7 | 26 | 331 | 14 | 340 | 2.39e-51 | 174 |
| MsG0780036377.01.T01 | AT5G37170 | 43.939 | 198 | 107 | 4 | 157 | 351 | 38 | 234 | 4.60e-49 | 165 |
| MsG0780036377.01.T01 | AT5G37170 | 44.385 | 187 | 100 | 4 | 168 | 351 | 1 | 186 | 1.45e-46 | 157 |
| MsG0780036377.01.T01 | AT1G33030 | 37.109 | 256 | 138 | 6 | 21 | 256 | 3 | 255 | 2.75e-44 | 154 |
| MsG0780036377.01.T01 | AT1G33030 | 37.008 | 254 | 137 | 6 | 21 | 254 | 3 | 253 | 5.52e-43 | 150 |
| MsG0780036377.01.T01 | AT1G63140 | 37.838 | 259 | 135 | 7 | 21 | 254 | 46 | 303 | 7.43e-42 | 148 |
| MsG0780036377.01.T01 | AT1G21130 | 39.925 | 268 | 129 | 10 | 14 | 254 | 13 | 275 | 9.79e-39 | 140 |
| MsG0780036377.01.T01 | AT4G35150 | 30.195 | 308 | 178 | 9 | 39 | 336 | 30 | 310 | 5.48e-38 | 139 |
| MsG0780036377.01.T01 | AT4G35160 | 29.664 | 327 | 198 | 8 | 39 | 336 | 44 | 367 | 1.50e-35 | 133 |
| MsG0780036377.01.T01 | AT1G77530 | 35.865 | 237 | 126 | 5 | 25 | 236 | 30 | 265 | 7.69e-33 | 123 |
| MsG0780036377.01.T01 | AT1G63140 | 36.066 | 244 | 130 | 7 | 21 | 239 | 46 | 288 | 7.91e-32 | 121 |
Find 82 sgRNAs with CRISPR-Local
Find 181 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCCTTTATTGTTGGATATT+TGG | 0.104667 | 7:+7284471 | None:intergenic |
| TGAAAATGACCGTGGCTATT+TGG | 0.212694 | 7:-7286899 | MsG0780036377.01.T01:CDS |
| TGTTGGATATTTGGATATAA+TGG | 0.232453 | 7:+7284480 | None:intergenic |
| GAAAATGACCGTGGCTATTT+GGG | 0.233700 | 7:-7286898 | MsG0780036377.01.T01:CDS |
| TTCTTTGATCCTAAATCTTC+TGG | 0.234429 | 7:+7284027 | None:intergenic |
| AACATACGGTCAAGCCTATT+TGG | 0.244030 | 7:+7287033 | None:intergenic |
| AATTTAGGGATTGAACATTT+TGG | 0.256339 | 7:-7284316 | MsG0780036377.01.T01:intron |
| GGTAGCATGGGGAGAGTTTA+TGG | 0.259081 | 7:-7286955 | MsG0780036377.01.T01:CDS |
| CCAAAGGAATATGAGAGTTT+AGG | 0.266212 | 7:-7283937 | MsG0780036377.01.T01:CDS |
| TTCTTATCACCAGAAGATTT+AGG | 0.285124 | 7:-7284036 | MsG0780036377.01.T01:CDS |
| CTCAACTTGTTTGAAATCAT+TGG | 0.292345 | 7:-7287117 | MsG0780036377.01.T01:CDS |
| ATTCTCTTTCTCATTGGTAT+AGG | 0.302862 | 7:+7287251 | None:intergenic |
| CAAAGGAATATGAGAGTTTA+GGG | 0.309778 | 7:-7283936 | MsG0780036377.01.T01:CDS |
| CATATCCTTTGTATATTTCA+AGG | 0.318611 | 7:+7284557 | None:intergenic |
| GATTAAACGATTACCTTGAT+AGG | 0.322967 | 7:+7284408 | None:intergenic |
| GACCTATTCAAGAAAGTTCA+TGG | 0.331773 | 7:-7284676 | MsG0780036377.01.T01:CDS |
| AAATTGATTGCCTTTATTGT+TGG | 0.335648 | 7:+7284463 | None:intergenic |
| TTCCATGAACTTTCTTGAAT+AGG | 0.343440 | 7:+7284674 | None:intergenic |
| CCTAAACTCTCATATTCCTT+TGG | 0.349570 | 7:+7283937 | None:intergenic |
| TGTAGCTTGTGTGCCATAAT+TGG | 0.353110 | 7:-7284137 | MsG0780036377.01.T01:intron |
| AACACTCTGACTTGCCAAAT+AGG | 0.353637 | 7:-7287047 | MsG0780036377.01.T01:CDS |
| AACTGCTGGAAACACCAAAT+TGG | 0.362727 | 7:+7287158 | None:intergenic |
| CATGGTACTAGGTGCCAATT+TGG | 0.366934 | 7:-7287172 | MsG0780036377.01.T01:CDS |
| ATCCAAATATCCAACAATAA+AGG | 0.367463 | 7:-7284473 | MsG0780036377.01.T01:CDS |
| GTCTCATTGTCATCTATTTG+TGG | 0.378564 | 7:+7287204 | None:intergenic |
| CACATGATTCTCTTTCTCAT+TGG | 0.381581 | 7:+7287245 | None:intergenic |
| AGGAGATGCTATAATGCTTA+AGG | 0.386590 | 7:-7284266 | MsG0780036377.01.T01:intron |
| TGCCGTGCTTTCTCCATCCT+CGG | 0.392930 | 7:-7283880 | MsG0780036377.01.T01:CDS |
| TCTCATTGTCATCTATTTGT+GGG | 0.397323 | 7:+7287205 | None:intergenic |
| TGAAATATACAAAGGATATG+AGG | 0.400826 | 7:-7284554 | MsG0780036377.01.T01:CDS |
| GAATTTCAAGGATGCAGTTA+TGG | 0.405462 | 7:-7284710 | MsG0780036377.01.T01:CDS |
| GCAATATAGGTTGAATTTCA+AGG | 0.409566 | 7:-7284722 | MsG0780036377.01.T01:intron |
| ACAATAATGACCTTACCATT+TGG | 0.414692 | 7:+7284063 | None:intergenic |
| ACACTCTCTGCCATGGTACT+AGG | 0.442707 | 7:-7287183 | MsG0780036377.01.T01:CDS |
| CACAAAGCTTTGCCTCCAAA+TGG | 0.455140 | 7:-7284078 | MsG0780036377.01.T01:CDS |
| GTTGATGTAGGAGGTGGAAA+TGG | 0.464456 | 7:-7284517 | MsG0780036377.01.T01:CDS |
| TCATTGATTTGTTAAATATG+TGG | 0.472047 | 7:+7284611 | None:intergenic |
| AACATCATGTTTATCACAGC+TGG | 0.473195 | 7:-7283976 | MsG0780036377.01.T01:CDS |
| CCCCATGCTACCATCATCAT+TGG | 0.475242 | 7:+7286966 | None:intergenic |
| ATTGCAGCATTAAGAACTGC+TGG | 0.480012 | 7:+7287144 | None:intergenic |
| CTCATTGTCATCTATTTGTG+GGG | 0.481696 | 7:+7287206 | None:intergenic |
| GTTTATGGTATCACGACATC+TGG | 0.500809 | 7:-7286940 | MsG0780036377.01.T01:CDS |
| ACCAATGATGATGGTAGCAT+GGG | 0.504761 | 7:-7286967 | MsG0780036377.01.T01:CDS |
| GGCAAGTCAGAGTGTTGAGT+TGG | 0.505145 | 7:+7287054 | None:intergenic |
| ATTAAACGATTACCTTGATA+GGG | 0.514025 | 7:+7284409 | None:intergenic |
| ATTGTCATCTATTTGTGGGG+GGG | 0.516060 | 7:+7287209 | None:intergenic |
| TTGTTTGAAATCATTGGTGA+TGG | 0.517050 | 7:-7287111 | MsG0780036377.01.T01:CDS |
| ATCAAAGAATGCATCTAAGA+TGG | 0.518349 | 7:-7284013 | MsG0780036377.01.T01:CDS |
| GAAAATGCACCACCCTATCA+AGG | 0.519696 | 7:-7284421 | MsG0780036377.01.T01:intron |
| TCATTGTCATCTATTTGTGG+GGG | 0.521365 | 7:+7287207 | None:intergenic |
| GTTTATCACAGCTGGTGGTA+AGG | 0.522095 | 7:-7283968 | MsG0780036377.01.T01:CDS |
| GACCAATGATGATGGTAGCA+TGG | 0.529166 | 7:-7286968 | MsG0780036377.01.T01:CDS |
| CAAATTGGCACCTAGTACCA+TGG | 0.530083 | 7:+7287173 | None:intergenic |
| CATTGTCATCTATTTGTGGG+GGG | 0.530593 | 7:+7287208 | None:intergenic |
| ATAATGACCTTACCATTTGG+AGG | 0.535537 | 7:+7284066 | None:intergenic |
| AGCTTTGCCTCCAAATGGTA+AGG | 0.551516 | 7:-7284073 | MsG0780036377.01.T01:CDS |
| GAAATATACAAAGGATATGA+GGG | 0.554252 | 7:-7284553 | MsG0780036377.01.T01:CDS |
| ACACTAGTTGATGTAGGAGG+TGG | 0.556091 | 7:-7284523 | MsG0780036377.01.T01:CDS |
| GAGTTCCATCACTCCGAGGA+TGG | 0.560721 | 7:+7283867 | None:intergenic |
| TTTCTCCATCCTCGGAGTGA+TGG | 0.566340 | 7:-7283872 | MsG0780036377.01.T01:CDS |
| TTGCAAGCAAGCGCAACATA+CGG | 0.566577 | 7:+7287019 | None:intergenic |
| AAATGGTAAGGTCATTATTG+TGG | 0.574360 | 7:-7284061 | MsG0780036377.01.T01:CDS |
| CTCCGAGGATGGAGAAAGCA+CGG | 0.580740 | 7:+7283878 | None:intergenic |
| ATATCAACACTAGTTGATGT+AGG | 0.582857 | 7:-7284529 | MsG0780036377.01.T01:CDS |
| TCAACTAAGACCAATGATGA+TGG | 0.583207 | 7:-7286976 | MsG0780036377.01.T01:CDS |
| AGCATTATAGCATCTCCTTG+TGG | 0.587439 | 7:+7284271 | None:intergenic |
| TTCTTGAATAGGTCAATCTG+TGG | 0.593090 | 7:+7284685 | None:intergenic |
| GTTAGTAATGAAAATGACCG+TGG | 0.620038 | 7:-7286907 | MsG0780036377.01.T01:CDS |
| AGAATCCTTGAAATATACAA+AGG | 0.621043 | 7:-7284562 | MsG0780036377.01.T01:CDS |
| AAACGATTACCTTGATAGGG+TGG | 0.626057 | 7:+7284412 | None:intergenic |
| CAATGAGACACTCTCTGCCA+TGG | 0.626681 | 7:-7287190 | MsG0780036377.01.T01:CDS |
| ATCATGTTTATCACAGCTGG+TGG | 0.631832 | 7:-7283973 | MsG0780036377.01.T01:CDS |
| TGGTAAGGAAAGAACTCCAA+AGG | 0.640143 | 7:-7283953 | MsG0780036377.01.T01:CDS |
| GAGAGTTTAGGGAAACAATG+TGG | 0.640788 | 7:-7283925 | MsG0780036377.01.T01:CDS |
| TGAGAAAGAGAATCATGTGG+TGG | 0.648539 | 7:-7287241 | MsG0780036377.01.T01:CDS |
| AAAATGACCGTGGCTATTTG+GGG | 0.651797 | 7:-7286897 | MsG0780036377.01.T01:intron |
| TCAACACTAGTTGATGTAGG+AGG | 0.661904 | 7:-7284526 | MsG0780036377.01.T01:CDS |
| ATGTTTGAATGTGTTCCACA+AGG | 0.665860 | 7:-7284286 | MsG0780036377.01.T01:CDS |
| TCATTGACCCCAAATAGCCA+CGG | 0.680122 | 7:+7286890 | None:intergenic |
| TGTAGAGTTCCATCACTCCG+AGG | 0.709965 | 7:+7283863 | None:intergenic |
| CCAATGATGATGGTAGCATG+GGG | 0.712754 | 7:-7286966 | MsG0780036377.01.T01:CDS |
| CAATGAGAAAGAGAATCATG+TGG | 0.722288 | 7:-7287244 | MsG0780036377.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATTTAATATTGATGTAT+TGG | - | Chr7:7286306-7286325 | MsG0780036377.01.T01:intron | 10.0% |
| !! | AAAATTTCAAAACAAAATTT+AGG | - | Chr7:7286782-7286801 | MsG0780036377.01.T01:intron | 10.0% |
| !! | AAATTTCAAAACAAAATTTA+GGG | - | Chr7:7286783-7286802 | MsG0780036377.01.T01:intron | 10.0% |
| !! | AATAAAGAAAAAAATTATGT+AGG | + | Chr7:7285962-7285981 | None:intergenic | 10.0% |
| !! | GTATATAAAGTTATTAAATA+TGG | + | Chr7:7284509-7284528 | None:intergenic | 10.0% |
| !! | TAATATAATCAATTAATTGA+TGG | - | Chr7:7286067-7286086 | MsG0780036377.01.T01:intron | 10.0% |
| !! | TATTTCAAAATATATATACA+TGG | - | Chr7:7284345-7284364 | MsG0780036377.01.T01:intron | 10.0% |
| !! | AAAAAATTCTCTTATTGAAT+TGG | - | Chr7:7284979-7284998 | MsG0780036377.01.T01:intron | 15.0% |
| !! | AAATTTCACATCAATATTAA+AGG | + | Chr7:7285878-7285897 | None:intergenic | 15.0% |
| !! | AATTTCACATCAATATTAAA+GGG | + | Chr7:7285877-7285896 | None:intergenic | 15.0% |
| !! | TATATATAATCATGAAGATA+AGG | - | Chr7:7285646-7285665 | MsG0780036377.01.T01:intron | 15.0% |
| !!! | AAAAATTGTTTTTGCAATAT+AGG | - | Chr7:7286378-7286397 | MsG0780036377.01.T01:intron | 15.0% |
| !!! | ACAAAATAACCATTTTAATA+AGG | + | Chr7:7284299-7284318 | None:intergenic | 15.0% |
| !!! | ACTTTTTAAAAATGGTATAA+GGG | - | Chr7:7285394-7285413 | MsG0780036377.01.T01:intron | 15.0% |
| !!! | CAAAATAACCATTTTAATAA+GGG | + | Chr7:7284298-7284317 | None:intergenic | 15.0% |
| !!! | TAATATGGACTTTTTAAAAA+TGG | - | Chr7:7285386-7285405 | MsG0780036377.01.T01:intron | 15.0% |
| !!! | TCTATTTGACTTAATTAATA+TGG | - | Chr7:7284321-7284340 | MsG0780036377.01.T01:intron | 15.0% |
| !!! | TTAAATATGTGGTTTATTTT+TGG | + | Chr7:7286494-7286513 | None:intergenic | 15.0% |
| !!! | TTAACCATAGTTTTAAAAAT+CGG | - | Chr7:7284838-7284857 | MsG0780036377.01.T01:intron | 15.0% |
| !!! | TTATTTTCCAACATAAAAAA+TGG | - | Chr7:7284808-7284827 | MsG0780036377.01.T01:intron | 15.0% |
| !!! | TTTAAAATTAGGATTGAATT+AGG | + | Chr7:7285989-7286008 | None:intergenic | 15.0% |
| !!! | TTTTATGTTGGAAAATAAAA+AGG | + | Chr7:7284806-7284825 | None:intergenic | 15.0% |
| !! | AAAATAGAAAGATCTATTGT+CGG | - | Chr7:7285494-7285513 | MsG0780036377.01.T01:intron | 20.0% |
| !! | AATTCACTCATTTCAAAATT+AGG | + | Chr7:7286133-7286152 | None:intergenic | 20.0% |
| !! | ACAAATGACTAAAGTAAAAA+AGG | - | Chr7:7284705-7284724 | MsG0780036377.01.T01:CDS | 20.0% |
| !! | ATTAAATAATCTTGAGAAAG+TGG | + | Chr7:7286756-7286775 | None:intergenic | 20.0% |
| !! | GCAAGTAATGATAAATATAT+CGG | + | Chr7:7286336-7286355 | None:intergenic | 20.0% |
| !!! | AACTTTGTTTTTTTTTAAGC+TGG | - | Chr7:7285562-7285581 | MsG0780036377.01.T01:intron | 20.0% |
| !!! | AATTTTGAAATGAGTGAATT+TGG | - | Chr7:7286133-7286152 | MsG0780036377.01.T01:intron | 20.0% |
| !!! | ACAATAGATCTTTCTATTTT+AGG | + | Chr7:7285494-7285513 | None:intergenic | 20.0% |
| !!! | GACTTTTTAAAAATGGTATA+AGG | - | Chr7:7285393-7285412 | MsG0780036377.01.T01:intron | 20.0% |
| !!! | GTTAACTTTTGTATTTCATT+AGG | + | Chr7:7285111-7285130 | None:intergenic | 20.0% |
| !!! | TCATTGATTTGTTAAATATG+TGG | + | Chr7:7286505-7286524 | None:intergenic | 20.0% |
| !!! | TTTTTTATAGTTTGTAGTCT+TGG | + | Chr7:7284770-7284789 | None:intergenic | 20.0% |
| ! | AAAAAAACAAAGTTGACCAA+TGG | + | Chr7:7285556-7285575 | None:intergenic | 25.0% |
| ! | AAAATACACATGTTCAAACA+TGG | - | Chr7:7284473-7284492 | MsG0780036377.01.T01:CDS | 25.0% |
| ! | AAATTGATTGCCTTTATTGT+TGG | + | Chr7:7286653-7286672 | None:intergenic | 25.0% |
| ! | AAGACTAAATAATACACACA+TGG | - | Chr7:7286105-7286124 | MsG0780036377.01.T01:intron | 25.0% |
| ! | AGAATCCTTGAAATATACAA+AGG | - | Chr7:7286551-7286570 | MsG0780036377.01.T01:intron | 25.0% |
| ! | ATCCAAATATCCAACAATAA+AGG | - | Chr7:7286640-7286659 | MsG0780036377.01.T01:intron | 25.0% |
| ! | ATGAATAAGTGAAGATTATG+AGG | + | Chr7:7284405-7284424 | None:intergenic | 25.0% |
| ! | ATTAAACGATTACCTTGATA+GGG | + | Chr7:7286707-7286726 | None:intergenic | 25.0% |
| ! | CATATCCTTTGTATATTTCA+AGG | + | Chr7:7286559-7286578 | None:intergenic | 25.0% |
| ! | GAAATATACAAAGGATATGA+GGG | - | Chr7:7286560-7286579 | MsG0780036377.01.T01:intron | 25.0% |
| ! | TGAAATATACAAAGGATATG+AGG | - | Chr7:7286559-7286578 | MsG0780036377.01.T01:intron | 25.0% |
| ! | TGTTGGATATTTGGATATAA+TGG | + | Chr7:7286636-7286655 | None:intergenic | 25.0% |
| ! | TTATTGAACAGTTGCAAATA+AGG | + | Chr7:7285283-7285302 | None:intergenic | 25.0% |
| ! | TTGGATAAAAAATTGTCTCA+TGG | + | Chr7:7284751-7284770 | None:intergenic | 25.0% |
| !! | AATTTAGGGATTGAACATTT+TGG | - | Chr7:7286797-7286816 | MsG0780036377.01.T01:intron | 25.0% |
| !! | ATTTCTAAGCAATTTTCATC+TGG | + | Chr7:7287002-7287021 | None:intergenic | 25.0% |
| !! | GTGTTTTTCCCTTATTAAAA+TGG | - | Chr7:7284287-7284306 | MsG0780036377.01.T01:CDS | 25.0% |
| !! | TGATTCTAATTTTGTACTCA+TGG | - | Chr7:7286943-7286962 | MsG0780036377.01.T01:CDS | 25.0% |
| !!! | AATGACCAATTTTAAAGTGT+AGG | - | Chr7:7286276-7286295 | MsG0780036377.01.T01:intron | 25.0% |
| !!! | AGCAATACCATTTTTTATGT+TGG | + | Chr7:7284818-7284837 | None:intergenic | 25.0% |
| !!! | TTGTCATTTTTCATCAAACT+CGG | + | Chr7:7286202-7286221 | None:intergenic | 25.0% |
| !!! | TTTAGCCTACACTTTAAAAT+TGG | + | Chr7:7286284-7286303 | None:intergenic | 25.0% |
| AAATGGTAAGGTCATTATTG+TGG | - | Chr7:7287052-7287071 | MsG0780036377.01.T01:CDS | 30.0% | |
| ACAATAATGACCTTACCATT+TGG | + | Chr7:7287053-7287072 | None:intergenic | 30.0% | |
| AGATCAAACAACTGAGTTAT+TGG | - | Chr7:7284895-7284914 | MsG0780036377.01.T01:intron | 30.0% | |
| ATCAAAGAATGCATCTAAGA+TGG | - | Chr7:7287100-7287119 | MsG0780036377.01.T01:CDS | 30.0% | |
| ATTCTCTTTCTCATTGGTAT+AGG | + | Chr7:7283865-7283884 | None:intergenic | 30.0% | |
| CAAAGGAATATGAGAGTTTA+GGG | - | Chr7:7287177-7287196 | MsG0780036377.01.T01:CDS | 30.0% | |
| GATTAAACGATTACCTTGAT+AGG | + | Chr7:7286708-7286727 | None:intergenic | 30.0% | |
| GTGTCAATTGCATTATTCTA+GGG | - | Chr7:7284367-7284386 | MsG0780036377.01.T01:intron | 30.0% | |
| TCTCATTGTCATCTATTTGT+GGG | + | Chr7:7283911-7283930 | None:intergenic | 30.0% | |
| TGCCTTTATTGTTGGATATT+TGG | + | Chr7:7286645-7286664 | None:intergenic | 30.0% | |
| TTCCATGAACTTTCTTGAAT+AGG | + | Chr7:7286442-7286461 | None:intergenic | 30.0% | |
| TTCTTATCACCAGAAGATTT+AGG | - | Chr7:7287077-7287096 | MsG0780036377.01.T01:CDS | 30.0% | |
| TTCTTTGATCCTAAATCTTC+TGG | + | Chr7:7287089-7287108 | None:intergenic | 30.0% | |
| ! | AATTTTCATCTGGCCAATTA+TGG | + | Chr7:7286992-7287011 | None:intergenic | 30.0% |
| ! | ATATCAACACTAGTTGATGT+AGG | - | Chr7:7286584-7286603 | MsG0780036377.01.T01:intron | 30.0% |
| ! | CTCAACTTGTTTGAAATCAT+TGG | - | Chr7:7283996-7284015 | MsG0780036377.01.T01:CDS | 30.0% |
| ! | GCAATATAGGTTGAATTTCA+AGG | - | Chr7:7286391-7286410 | MsG0780036377.01.T01:intron | 30.0% |
| ! | TTGTTTGAAATCATTGGTGA+TGG | - | Chr7:7284002-7284021 | MsG0780036377.01.T01:CDS | 30.0% |
| AACATCATGTTTATCACAGC+TGG | - | Chr7:7287137-7287156 | MsG0780036377.01.T01:CDS | 35.0% | |
| AGGAGATGCTATAATGCTTA+AGG | - | Chr7:7286847-7286866 | MsG0780036377.01.T01:intron | 35.0% | |
| ATAATGACCTTACCATTTGG+AGG | + | Chr7:7287050-7287069 | None:intergenic | 35.0% | |
| ATGTTTGAATGTGTTCCACA+AGG | - | Chr7:7286827-7286846 | MsG0780036377.01.T01:intron | 35.0% | |
| ATTAATGCATATGCGTCGTT+AGG | + | Chr7:7284585-7284604 | None:intergenic | 35.0% | |
| CAATGAGAAAGAGAATCATG+TGG | - | Chr7:7283869-7283888 | MsG0780036377.01.T01:CDS | 35.0% | |
| CACATGATTCTCTTTCTCAT+TGG | + | Chr7:7283871-7283890 | None:intergenic | 35.0% | |
| CCAAAGGAATATGAGAGTTT+AGG | - | Chr7:7287176-7287195 | MsG0780036377.01.T01:CDS | 35.0% | |
| CCTAAACTCTCATATTCCTT+TGG | + | Chr7:7287179-7287198 | None:intergenic | 35.0% | |
| CTCATTGTCATCTATTTGTG+GGG | + | Chr7:7283910-7283929 | None:intergenic | 35.0% | |
| GAATTTCAAGGATGCAGTTA+TGG | - | Chr7:7286403-7286422 | MsG0780036377.01.T01:intron | 35.0% | |
| GACCTATTCAAGAAAGTTCA+TGG | - | Chr7:7286437-7286456 | MsG0780036377.01.T01:intron | 35.0% | |
| GAGTATCACATGACTTAACA+AGG | - | Chr7:7285668-7285687 | MsG0780036377.01.T01:intron | 35.0% | |
| GATTAAGGGGTTCTCTAAAT+TGG | + | Chr7:7285527-7285546 | None:intergenic | 35.0% | |
| GGTGTCAATTGCATTATTCT+AGG | - | Chr7:7284366-7284385 | MsG0780036377.01.T01:intron | 35.0% | |
| GTCTCATTGTCATCTATTTG+TGG | + | Chr7:7283912-7283931 | None:intergenic | 35.0% | |
| GTTAGTAATGAAAATGACCG+TGG | - | Chr7:7284206-7284225 | MsG0780036377.01.T01:intron | 35.0% | |
| TAACGACGCATATGCATTAA+TGG | - | Chr7:7284584-7284603 | MsG0780036377.01.T01:CDS | 35.0% | |
| TCAACTAAGACCAATGATGA+TGG | - | Chr7:7284137-7284156 | MsG0780036377.01.T01:intron | 35.0% | |
| TCACATGACTTAACAAGGAT+CGG | - | Chr7:7285673-7285692 | MsG0780036377.01.T01:intron | 35.0% | |
| TCATTGTCATCTATTTGTGG+GGG | + | Chr7:7283909-7283928 | None:intergenic | 35.0% | |
| TTCTTGAATAGGTCAATCTG+TGG | + | Chr7:7286431-7286450 | None:intergenic | 35.0% | |
| ! | ACCAATGGAATGTCGATTAA+GGG | + | Chr7:7285541-7285560 | None:intergenic | 35.0% |
| ! | GTGCATTTTCAATCACTTGT+GGG | + | Chr7:7286682-7286701 | None:intergenic | 35.0% |
| ! | TTAGGGATTGAACATTTTGG+AGG | - | Chr7:7286800-7286819 | MsG0780036377.01.T01:intron | 35.0% |
| ! | TTTTAAGCTGGTTAACAACC+AGG | - | Chr7:7285574-7285593 | MsG0780036377.01.T01:intron | 35.0% |
| !!! | AATTGTCTCATGGTTTTGTG+AGG | + | Chr7:7284741-7284760 | None:intergenic | 35.0% |
| !!! | ACTTGTTTTGTCTAGTCTCA+TGG | + | Chr7:7284684-7284703 | None:intergenic | 35.0% |
| !!! | ATTGTCTCATGGTTTTGTGA+GGG | + | Chr7:7284740-7284759 | None:intergenic | 35.0% |
| !!! | CGGTCCGATTTTTAAAACTA+TGG | + | Chr7:7284845-7284864 | None:intergenic | 35.0% |
| AAAATGACCGTGGCTATTTG+GGG | - | Chr7:7284216-7284235 | MsG0780036377.01.T01:intron | 40.0% | |
| AAACGATTACCTTGATAGGG+TGG | + | Chr7:7286704-7286723 | None:intergenic | 40.0% | |
| AACAAAGTTGACCAATGACC+TGG | + | Chr7:7285595-7285614 | None:intergenic | 40.0% | |
| AACATACGGTCAAGCCTATT+TGG | + | Chr7:7284083-7284102 | None:intergenic | 40.0% | |
| AACTGCTGGAAACACCAAAT+TGG | + | Chr7:7283958-7283977 | None:intergenic | 40.0% | |
| AGAATAAACCGATGACTGAG+AGG | + | Chr7:7285243-7285262 | None:intergenic | 40.0% | |
| AGCATTATAGCATCTCCTTG+TGG | + | Chr7:7286845-7286864 | None:intergenic | 40.0% | |
| ATCATGTTTATCACAGCTGG+TGG | - | Chr7:7287140-7287159 | MsG0780036377.01.T01:CDS | 40.0% | |
| ATTGCAGCATTAAGAACTGC+TGG | + | Chr7:7283972-7283991 | None:intergenic | 40.0% | |
| ATTGTCATCTATTTGTGGGG+GGG | + | Chr7:7283907-7283926 | None:intergenic | 40.0% | |
| CATTGTCATCTATTTGTGGG+GGG | + | Chr7:7283908-7283927 | None:intergenic | 40.0% | |
| CGAGTCAGGTCAATATTGTT+GGG | + | Chr7:7285210-7285229 | None:intergenic | 40.0% | |
| GAAAATGACCGTGGCTATTT+GGG | - | Chr7:7284215-7284234 | MsG0780036377.01.T01:intron | 40.0% | |
| GAGAGTTTAGGGAAACAATG+TGG | - | Chr7:7287188-7287207 | MsG0780036377.01.T01:CDS | 40.0% | |
| GTTTATGGTATCACGACATC+TGG | - | Chr7:7284173-7284192 | MsG0780036377.01.T01:intron | 40.0% | |
| TCGAGTCAGGTCAATATTGT+TGG | + | Chr7:7285211-7285230 | None:intergenic | 40.0% | |
| TGAAAATGACCGTGGCTATT+TGG | - | Chr7:7284214-7284233 | MsG0780036377.01.T01:intron | 40.0% | |
| TGAGAAAACCTCTCAGTCAT+CGG | - | Chr7:7285232-7285251 | MsG0780036377.01.T01:intron | 40.0% | |
| TGAGAAAGAGAATCATGTGG+TGG | - | Chr7:7283872-7283891 | MsG0780036377.01.T01:CDS | 40.0% | |
| TGGTAAGGAAAGAACTCCAA+AGG | - | Chr7:7287160-7287179 | MsG0780036377.01.T01:CDS | 40.0% | |
| ! | AACACTCTGACTTGCCAAAT+AGG | - | Chr7:7284066-7284085 | MsG0780036377.01.T01:CDS | 40.0% |
| ! | CATTTTCAATCACTTGTGGG+AGG | + | Chr7:7286679-7286698 | None:intergenic | 40.0% |
| ! | CCAATGGAATGTCGATTAAG+GGG | + | Chr7:7285540-7285559 | None:intergenic | 40.0% |
| ! | GACCAATGGAATGTCGATTA+AGG | + | Chr7:7285542-7285561 | None:intergenic | 40.0% |
| ! | GGTGCATTTTCAATCACTTG+TGG | + | Chr7:7286683-7286702 | None:intergenic | 40.0% |
| ! | TCAACACTAGTTGATGTAGG+AGG | - | Chr7:7286587-7286606 | MsG0780036377.01.T01:intron | 40.0% |
| ! | TGTAGCTTGTGTGCCATAAT+TGG | - | Chr7:7286976-7286995 | MsG0780036377.01.T01:CDS | 40.0% |
| !! | ACCAATGATGATGGTAGCAT+GGG | - | Chr7:7284146-7284165 | MsG0780036377.01.T01:intron | 40.0% |
| !! | GTTGACTTGATTGTGTCACT+TGG | - | Chr7:7284949-7284968 | MsG0780036377.01.T01:intron | 40.0% |
| !! | TCTCAGTCATCGGTTTATTC+TGG | - | Chr7:7285242-7285261 | MsG0780036377.01.T01:intron | 40.0% |
| AGCTTTGCCTCCAAATGGTA+AGG | - | Chr7:7287040-7287059 | MsG0780036377.01.T01:CDS | 45.0% | |
| CAAATTGGCACCTAGTACCA+TGG | + | Chr7:7283943-7283962 | None:intergenic | 45.0% | |
| CACAAAGCTTTGCCTCCAAA+TGG | - | Chr7:7287035-7287054 | MsG0780036377.01.T01:CDS | 45.0% | |
| CATGGTACTAGGTGCCAATT+TGG | - | Chr7:7283941-7283960 | MsG0780036377.01.T01:CDS | 45.0% | |
| CCCCTTAATCGACATTCCAT+TGG | - | Chr7:7285537-7285556 | MsG0780036377.01.T01:intron | 45.0% | |
| CTGGTTAACAACCAGGTCAT+TGG | - | Chr7:7285581-7285600 | MsG0780036377.01.T01:intron | 45.0% | |
| GAAAATGCACCACCCTATCA+AGG | - | Chr7:7286692-7286711 | MsG0780036377.01.T01:intron | 45.0% | |
| GTTGATGTAGGAGGTGGAAA+TGG | - | Chr7:7286596-7286615 | MsG0780036377.01.T01:intron | 45.0% | |
| GTTTATCACAGCTGGTGGTA+AGG | - | Chr7:7287145-7287164 | MsG0780036377.01.T01:CDS | 45.0% | |
| TCATTGACCCCAAATAGCCA+CGG | + | Chr7:7284226-7284245 | None:intergenic | 45.0% | |
| TGTGTCACCCTGCTTTCTTA+GGG | - | Chr7:7284255-7284274 | MsG0780036377.01.T01:intron | 45.0% | |
| TTGCAAGCAAGCGCAACATA+CGG | + | Chr7:7284097-7284116 | None:intergenic | 45.0% | |
| TTGTGTCACCCTGCTTTCTT+AGG | - | Chr7:7284254-7284273 | MsG0780036377.01.T01:intron | 45.0% | |
| ! | ACACTAGTTGATGTAGGAGG+TGG | - | Chr7:7286590-7286609 | MsG0780036377.01.T01:intron | 45.0% |
| ! | GAGGTTTTCTCAATCGAGTC+AGG | + | Chr7:7285224-7285243 | None:intergenic | 45.0% |
| !! | CCAATGATGATGGTAGCATG+GGG | - | Chr7:7284147-7284166 | MsG0780036377.01.T01:intron | 45.0% |
| !! | CGGTTTATTCTGGTTCTCGT+TGG | - | Chr7:7285252-7285271 | MsG0780036377.01.T01:intron | 45.0% |
| !! | GACCAATGATGATGGTAGCA+TGG | - | Chr7:7284145-7284164 | MsG0780036377.01.T01:intron | 45.0% |
| !! | TCCAGTCAGATCGATTTGAC+CGG | - | Chr7:7285341-7285360 | MsG0780036377.01.T01:intron | 45.0% |
| !!! | AAATATTTAACTTTAAAATT+AGG | + | Chr7:7286000-7286019 | None:intergenic | 5.0% |
| ACACTCTCTGCCATGGTACT+AGG | - | Chr7:7283930-7283949 | MsG0780036377.01.T01:CDS | 50.0% | |
| CAATGAGACACTCTCTGCCA+TGG | - | Chr7:7283923-7283942 | MsG0780036377.01.T01:CDS | 50.0% | |
| CACCTTACCAAGTCAGTGGT+CGG | + | Chr7:7284865-7284884 | None:intergenic | 50.0% | |
| CCCCATGCTACCATCATCAT+TGG | + | Chr7:7284150-7284169 | None:intergenic | 50.0% | |
| GGTAGCATGGGGAGAGTTTA+TGG | - | Chr7:7284158-7284177 | MsG0780036377.01.T01:intron | 50.0% | |
| GGTCAAATCGATCTGACTGG+AGG | + | Chr7:7285342-7285361 | None:intergenic | 50.0% | |
| GTGTCACCCTGCTTTCTTAG+GGG | - | Chr7:7284256-7284275 | MsG0780036377.01.T01:intron | 50.0% | |
| TACGACGGCGGTGTCTAATA+TGG | - | Chr7:7285371-7285390 | MsG0780036377.01.T01:intron | 50.0% | |
| TGTAGAGTTCCATCACTCCG+AGG | + | Chr7:7287253-7287272 | None:intergenic | 50.0% | |
| TTGACCGGGAGCTAATACGA+CGG | - | Chr7:7285356-7285375 | MsG0780036377.01.T01:intron | 50.0% | |
| TTTCTCCATCCTCGGAGTGA+TGG | - | Chr7:7287241-7287260 | MsG0780036377.01.T01:CDS | 50.0% | |
| !! | CCAGTCAGATCGATTTGACC+GGG | - | Chr7:7285342-7285361 | MsG0780036377.01.T01:intron | 50.0% |
| !! | GGCAAGTCAGAGTGTTGAGT+TGG | + | Chr7:7284062-7284081 | None:intergenic | 50.0% |
| ACCCTGCTTTCTTAGGGGTG+TGG | - | Chr7:7284261-7284280 | MsG0780036377.01.T01:intron | 55.0% | |
| CCAGCACCTTACCAAGTCAG+TGG | + | Chr7:7284869-7284888 | None:intergenic | 55.0% | |
| CCCGGTCAAATCGATCTGAC+TGG | + | Chr7:7285345-7285364 | None:intergenic | 55.0% | |
| CTCCGAGGATGGAGAAAGCA+CGG | + | Chr7:7287238-7287257 | None:intergenic | 55.0% | |
| GACTGGAGGACGAACTGACT+CGG | + | Chr7:7285328-7285347 | None:intergenic | 55.0% | |
| GAGTTCCATCACTCCGAGGA+TGG | + | Chr7:7287249-7287268 | None:intergenic | 55.0% | |
| GCCACACCCCTAAGAAAGCA+GGG | + | Chr7:7284265-7284284 | None:intergenic | 55.0% | |
| TGCCACACCCCTAAGAAAGC+AGG | + | Chr7:7284266-7284285 | None:intergenic | 55.0% | |
| TGCCGTGCTTTCTCCATCCT+CGG | - | Chr7:7287233-7287252 | MsG0780036377.01.T01:CDS | 55.0% | |
| ! | AATCGGACCGACCACTGACT+TGG | - | Chr7:7284855-7284874 | MsG0780036377.01.T01:intron | 55.0% |
| !! | CCACTGACTTGGTAAGGTGC+TGG | - | Chr7:7284866-7284885 | MsG0780036377.01.T01:intron | 55.0% |
| !! | GACCGACCACTGACTTGGTA+AGG | - | Chr7:7284860-7284879 | MsG0780036377.01.T01:intron | 55.0% |
| ACCGCCGTCGTATTAGCTCC+CGG | + | Chr7:7285363-7285382 | None:intergenic | 60.0% | |
| ACCGGGAGCTAATACGACGG+CGG | - | Chr7:7285359-7285378 | MsG0780036377.01.T01:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr7 | gene | 7283858 | 7287277 | 7283858 | ID=MsG0780036377.01;Name=MsG0780036377.01 |
| Chr7 | mRNA | 7283858 | 7287277 | 7283858 | ID=MsG0780036377.01.T01;Parent=MsG0780036377.01;Name=MsG0780036377.01.T01;_AED=0.37;_eAED=0.37;_QI=0|0|0|1|1|1|4|0|351 |
| Chr7 | exon | 7286898 | 7287277 | 7286898 | ID=MsG0780036377.01.T01:exon:3880;Parent=MsG0780036377.01.T01 |
| Chr7 | exon | 7284422 | 7284735 | 7284422 | ID=MsG0780036377.01.T01:exon:3879;Parent=MsG0780036377.01.T01 |
| Chr7 | exon | 7284267 | 7284331 | 7284267 | ID=MsG0780036377.01.T01:exon:3878;Parent=MsG0780036377.01.T01 |
| Chr7 | exon | 7283858 | 7284154 | 7283858 | ID=MsG0780036377.01.T01:exon:3877;Parent=MsG0780036377.01.T01 |
| Chr7 | CDS | 7286898 | 7287277 | 7286898 | ID=MsG0780036377.01.T01:cds;Parent=MsG0780036377.01.T01 |
| Chr7 | CDS | 7284422 | 7284735 | 7284422 | ID=MsG0780036377.01.T01:cds;Parent=MsG0780036377.01.T01 |
| Chr7 | CDS | 7284267 | 7284331 | 7284267 | ID=MsG0780036377.01.T01:cds;Parent=MsG0780036377.01.T01 |
| Chr7 | CDS | 7283858 | 7284154 | 7283858 | ID=MsG0780036377.01.T01:cds;Parent=MsG0780036377.01.T01 |
| Gene Sequence |
| Protein sequence |
