AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380016372.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380016372.01.T03 MTR_3g088520 92.754 69 5 0 6 74 451 519 2.32e-38 134
MsG0380016372.01.T03 MTR_3g088520 92.754 69 5 0 6 74 506 574 3.37e-38 134
MsG0380016372.01.T03 MTR_3g096910 46.667 75 35 1 5 74 358 432 1.79e-14 66.6
MsG0380016372.01.T03 MTR_3g096910 46.667 75 35 1 5 74 508 582 2.00e-14 66.6
MsG0380016372.01.T03 MTR_4g073290 38.667 75 41 1 5 74 515 589 2.20e-11 57.8
MsG0380016372.01.T02 MTR_3g088520 76.230 122 15 1 2 109 518 639 3.39e-55 181
MsG0380016372.01.T02 MTR_3g088520 76.230 122 15 1 2 109 573 694 5.71e-55 181
MsG0380016372.01.T02 MTR_3g096910 44.715 123 51 3 2 107 431 553 1.36e-26 102
MsG0380016372.01.T02 MTR_3g096910 44.000 125 53 3 2 109 581 705 2.36e-26 102
MsG0380016372.01.T02 MTR_2g039120 42.336 137 43 3 2 102 586 722 3.04e-26 101
MsG0380016372.01.T02 MTR_1g018200 42.336 137 43 3 2 102 590 726 6.68e-26 100
MsG0380016372.01.T02 MTR_8g016230 40.876 137 45 3 2 102 584 720 5.89e-23 92.4
MsG0380016372.01.T02 MTR_3g117840 40.000 115 55 2 2 102 592 706 1.45e-22 91.3
MsG0380016372.01.T02 MTR_4g073290 40.678 118 56 2 2 105 588 705 1.98e-21 88.2
MsG0380016372.01.T02 MTR_8g085210 39.416 137 46 4 2 102 639 774 1.15e-20 85.9
MsG0380016372.01.T02 MTR_3g096900 36.429 140 50 3 2 102 591 730 1.29e-19 82.8
MsG0380016372.01.T02 MTR_2g039120 53.247 77 31 2 2 76 586 659 2.35e-19 82.0
MsG0380016372.01.T02 MTR_4g126330 51.948 77 32 2 2 76 338 411 3.58e-18 78.6
MsG0380016372.01.T02 MTR_2g100110 41.606 137 44 3 2 102 587 723 4.40e-18 78.6
MsG0380016372.01.T02 MTR_5g025830 33.813 139 55 3 1 102 587 725 3.19e-17 75.9
MsG0380016372.01.T02 MTR_3g112370 35.036 137 53 3 2 102 586 722 9.48e-17 74.7
MsG0380016372.01.T02 MTR_2g094020 36.620 142 47 6 2 104 585 722 2.28e-16 73.6
MsG0380016372.01.T02 MTR_5g021190 33.813 139 52 4 2 102 584 720 2.66e-16 73.6
MsG0380016372.01.T02 MTR_2g094060 34.234 111 37 2 30 104 608 718 3.39e-15 70.1
MsG0380016372.01.T02 MTR_2g094060 34.234 111 37 2 30 104 608 718 3.99e-15 70.1
MsG0380016372.01.T02 MTR_3g096900 46.154 78 37 2 2 77 591 665 4.57e-14 67.0
MsG0380016372.01.T02 MTR_3g005610 33.621 116 65 4 2 105 178 293 1.95e-11 59.3
MsG0380016372.01.T01 MTR_3g088520 82.240 366 25 5 10 335 87 452 0.0 595
MsG0380016372.01.T01 MTR_3g088520 82.240 366 25 5 10 335 32 397 0.0 595
MsG0380016372.01.T01 MTR_3g096910 55.858 367 118 5 10 333 88 453 4.65e-139 411
MsG0380016372.01.T01 MTR_3g096910 51.645 304 103 5 73 333 1 303 3.35e-100 306
MsG0380016372.01.T01 MTR_4g073290 43.243 370 166 6 10 336 89 457 8.37e-97 305
MsG0380016372.01.T01 MTR_3g117840 48.845 303 137 2 10 294 96 398 3.25e-96 303
MsG0380016372.01.T01 MTR_2g100110 45.553 371 156 11 10 337 89 456 3.42e-93 289
MsG0380016372.01.T01 MTR_1g023120 47.011 368 145 12 11 334 33 394 4.35e-93 291
MsG0380016372.01.T01 MTR_1g023120 47.011 368 145 12 11 334 91 452 1.03e-92 292
MsG0380016372.01.T01 MTR_2g094060 49.829 293 126 5 10 284 83 372 4.36e-91 286
MsG0380016372.01.T01 MTR_2g039120 44.565 368 161 9 10 337 89 453 1.00e-90 283
MsG0380016372.01.T01 MTR_8g016230 50.489 307 124 7 10 294 86 386 1.02e-90 289
MsG0380016372.01.T01 MTR_2g100110 45.553 371 156 11 10 337 89 456 1.69e-90 288
MsG0380016372.01.T01 MTR_2g039120 44.565 368 161 9 10 337 89 453 3.05e-90 283
MsG0380016372.01.T01 MTR_4g059680 50.000 300 129 5 10 291 87 383 5.40e-90 287
MsG0380016372.01.T01 MTR_2g094060 49.829 293 126 5 10 284 83 372 5.59e-90 286
MsG0380016372.01.T01 MTR_2g039120 44.565 368 161 9 10 337 89 453 7.10e-90 283
MsG0380016372.01.T01 MTR_2g094060 49.829 293 126 5 10 284 83 372 9.49e-90 286
MsG0380016372.01.T01 MTR_2g094020 49.488 293 127 4 10 284 83 372 1.25e-89 286
MsG0380016372.01.T01 MTR_2g039120 44.565 368 161 9 10 337 89 453 1.32e-89 283
MsG0380016372.01.T01 MTR_3g112370 53.584 293 114 7 11 284 90 379 1.93e-89 283
MsG0380016372.01.T01 MTR_5g021190 51.701 294 118 6 11 284 88 377 6.55e-87 279
MsG0380016372.01.T01 MTR_1g018200 48.845 303 134 7 11 294 93 393 6.13e-86 274
MsG0380016372.01.T01 MTR_3g096900 49.488 293 128 4 10 284 88 378 4.91e-83 264
MsG0380016372.01.T01 MTR_3g096900 49.658 292 127 4 11 284 89 378 3.57e-82 263
MsG0380016372.01.T01 MTR_2g042610 47.586 290 133 6 10 282 88 375 3.96e-82 266
MsG0380016372.01.T01 MTR_3g096900 49.488 293 128 4 10 284 88 378 1.71e-81 263
MsG0380016372.01.T01 MTR_3g005570 46.326 313 142 7 10 298 87 397 2.79e-76 250
MsG0380016372.01.T01 MTR_8g085210 44.164 317 143 7 10 294 111 425 5.89e-76 251
MsG0380016372.01.T01 MTR_5g025830 46.006 313 143 8 10 298 89 399 5.68e-72 239
MsG0380016372.01.T01 MTR_5g024080 49.804 255 109 4 10 247 71 323 2.31e-71 237
MsG0380016372.01.T01 MTR_5g022590 39.510 286 134 8 4 269 26 292 2.39e-62 204
MsG0380016372.01.T01 MTR_4g126330 61.628 86 33 0 10 95 31 116 1.54e-26 109
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380016372.01.T03 AT5G63800 50.000 74 32 1 6 74 513 586 2.48e-16 72.0
MsG0380016372.01.T03 AT1G77410 51.351 74 32 2 5 74 504 577 3.64e-16 71.6
MsG0380016372.01.T03 AT1G77410 51.351 74 32 2 5 74 398 471 3.77e-16 71.6
MsG0380016372.01.T03 AT1G77410 51.351 74 32 2 5 74 398 471 3.77e-16 71.6
MsG0380016372.01.T03 AT1G77410 51.351 74 32 2 5 74 509 582 3.94e-16 71.6
MsG0380016372.01.T03 AT3G13750 46.667 75 34 2 6 74 520 594 4.66e-11 57.0
MsG0380016372.01.T02 AT1G77410 54.918 122 39 3 2 107 470 591 1.31e-36 131
MsG0380016372.01.T02 AT1G77410 54.918 122 39 3 2 107 470 591 1.31e-36 131
MsG0380016372.01.T02 AT1G77410 54.918 122 39 3 2 107 581 702 1.99e-36 130
MsG0380016372.01.T02 AT1G77410 54.918 122 39 3 2 107 576 697 2.02e-36 130
MsG0380016372.01.T02 AT5G63800 44.262 122 51 3 3 107 586 707 1.17e-26 102
MsG0380016372.01.T02 AT4G26140 37.226 137 50 3 2 102 611 747 1.11e-23 94.4
MsG0380016372.01.T02 AT4G26140 37.226 137 50 3 2 102 586 722 1.11e-23 94.4
MsG0380016372.01.T02 AT3G52840 37.956 137 49 3 2 102 639 775 1.56e-23 94.0
MsG0380016372.01.T02 AT3G52840 37.956 137 49 3 2 102 585 721 1.60e-23 94.0
MsG0380016372.01.T02 AT2G32810 37.589 141 51 3 2 105 618 758 2.74e-23 93.2
MsG0380016372.01.T02 AT2G32810 37.589 141 51 3 2 105 618 758 2.98e-23 93.2
MsG0380016372.01.T02 AT3G13750 42.336 137 43 3 2 102 593 729 1.68e-21 88.2
MsG0380016372.01.T02 AT4G35010 44.340 106 45 1 2 93 601 706 1.90e-21 88.2
MsG0380016372.01.T02 AT5G56870 36.496 137 50 4 2 102 585 720 3.06e-20 84.7
MsG0380016372.01.T02 AT4G38590 43.519 108 44 4 4 95 597 703 3.52e-20 84.3
MsG0380016372.01.T02 AT2G16730 41.509 106 48 1 2 93 604 709 5.76e-20 84.0
MsG0380016372.01.T02 AT4G38590 43.119 109 45 4 3 95 532 639 1.35e-19 82.8
MsG0380016372.01.T02 AT5G63810 34.507 142 52 3 2 102 592 733 3.80e-18 78.6
MsG0380016372.01.T02 AT1G45130 36.641 131 47 3 2 96 511 641 7.13e-18 77.8
MsG0380016372.01.T02 AT1G45130 36.641 131 47 3 2 96 590 720 8.02e-18 77.8
MsG0380016372.01.T02 AT2G28470 34.532 139 54 3 2 104 597 734 1.16e-17 77.4
MsG0380016372.01.T02 AT2G28470 34.532 139 54 3 2 104 597 734 1.16e-17 77.4
MsG0380016372.01.T02 AT2G28470 34.532 139 54 3 2 104 591 728 1.21e-17 77.4
MsG0380016372.01.T02 AT2G28470 34.532 139 54 3 2 104 591 728 1.21e-17 77.4
MsG0380016372.01.T02 AT4G26140 44.156 77 38 2 2 76 611 684 7.63e-17 75.1
MsG0380016372.01.T02 AT1G31740 41.304 92 35 4 28 105 599 685 3.80e-11 58.9
MsG0380016372.01.T02 AT2G28470 39.759 83 46 2 2 84 597 675 7.30e-11 57.8
MsG0380016372.01.T01 AT5G63800 54.496 367 126 5 8 333 91 457 3.45e-133 396
MsG0380016372.01.T01 AT1G77410 53.659 369 122 8 10 333 86 450 1.53e-128 387
MsG0380016372.01.T01 AT1G77410 52.941 374 122 9 10 333 86 455 3.01e-126 381
MsG0380016372.01.T01 AT1G77410 53.030 330 106 8 49 333 19 344 2.79e-110 337
MsG0380016372.01.T01 AT1G77410 53.030 330 106 8 49 333 19 344 2.79e-110 337
MsG0380016372.01.T01 AT4G35010 46.409 362 151 6 10 328 102 463 8.51e-101 315
MsG0380016372.01.T01 AT4G26140 48.066 362 146 9 10 331 90 449 9.25e-100 305
MsG0380016372.01.T01 AT4G26140 48.066 362 146 9 10 331 90 449 1.93e-99 305
MsG0380016372.01.T01 AT4G26140 48.066 362 146 9 10 331 90 449 1.93e-99 305
MsG0380016372.01.T01 AT4G26140 48.066 362 146 9 10 331 90 449 3.33e-99 306
MsG0380016372.01.T01 AT4G26140 54.639 291 114 5 10 284 90 378 2.04e-98 304
MsG0380016372.01.T01 AT4G26140 54.639 291 114 5 10 284 90 378 2.04e-98 304
MsG0380016372.01.T01 AT4G26140 48.066 362 146 9 10 331 90 449 4.39e-98 305
MsG0380016372.01.T01 AT4G26140 48.066 362 146 9 10 331 90 449 5.88e-98 305
MsG0380016372.01.T01 AT4G38590 49.669 302 134 3 10 293 32 333 7.79e-98 307
MsG0380016372.01.T01 AT4G26140 48.066 362 146 9 10 331 90 449 1.00e-97 305
MsG0380016372.01.T01 AT2G16730 51.361 294 125 3 10 285 105 398 6.09e-97 305
MsG0380016372.01.T01 AT4G38590 49.669 302 134 3 10 293 100 401 3.53e-96 307
MsG0380016372.01.T01 AT3G13750 52.303 304 123 7 10 294 95 395 1.90e-93 296
MsG0380016372.01.T01 AT3G52840 51.890 291 122 3 10 284 90 378 2.63e-93 293
MsG0380016372.01.T01 AT3G52840 51.890 291 122 3 10 284 144 432 4.68e-93 294
MsG0380016372.01.T01 AT5G56870 46.499 357 151 8 10 328 90 444 1.97e-92 291
MsG0380016372.01.T01 AT2G28470 50.680 294 123 5 10 284 93 383 2.80e-92 290
MsG0380016372.01.T01 AT2G28470 50.680 294 123 5 10 284 93 383 5.17e-91 290
MsG0380016372.01.T01 AT2G28470 50.680 294 123 5 10 284 93 383 5.17e-91 290
MsG0380016372.01.T01 AT2G28470 50.680 294 123 5 10 284 87 377 5.61e-91 290
MsG0380016372.01.T01 AT2G28470 50.680 294 123 5 10 284 87 377 5.61e-91 290
MsG0380016372.01.T01 AT5G63810 48.805 293 130 4 10 284 93 383 3.36e-88 280
MsG0380016372.01.T01 AT4G36360 49.660 294 126 5 10 284 94 384 8.75e-87 279
MsG0380016372.01.T01 AT4G36360 49.660 294 126 5 10 284 94 384 9.88e-87 279
MsG0380016372.01.T01 AT1G45130 50.333 300 128 8 3 284 7 303 5.51e-85 270
MsG0380016372.01.T01 AT2G32810 48.322 298 129 7 10 284 99 394 1.37e-82 268
MsG0380016372.01.T01 AT2G32810 48.322 298 129 7 10 284 99 394 2.22e-82 268
MsG0380016372.01.T01 AT1G45130 50.000 292 126 7 11 284 93 382 4.05e-82 264
MsG0380016372.01.T01 AT1G31740 46.918 292 136 6 10 284 83 372 2.47e-81 263
MsG0380016372.01.T01 AT5G20710 45.890 292 139 5 10 284 89 378 2.32e-78 256
MsG0380016372.01.T01 AT5G20710 42.353 170 92 5 117 284 8 173 1.20e-34 134
MsG0380016372.01.T01 AT1G72990 25.519 337 177 10 13 294 65 382 1.58e-15 78.2
MsG0380016372.01.T01 AT1G72990 25.519 337 177 10 13 294 72 389 1.87e-15 77.8
MsG0380016372.01.T01 AT1G72990 25.519 337 177 10 13 294 127 444 1.92e-15 77.8
MsG0380016372.01.T01 AT1G72990 25.519 337 177 10 13 294 127 444 1.92e-15 77.8
MsG0380016372.01.T01 AT2G04060 30.822 146 89 4 200 339 23 162 8.85e-14 72.4
MsG0380016372.01.T01 AT2G04062 30.631 111 56 2 10 120 68 157 7.45e-11 60.5

Find 130 sgRNAs with CRISPR-Local

Find 297 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CACAGAATGTGCTGCCTTCT+TGG 0.153848 3:+82616793 MsG0380016372.01.T01:CDS
TTTCATCATGTTGACTATTT+TGG 0.164006 3:-82615404 None:intergenic
TTCGAAGTATCGGCAAAATT+AGG 0.190151 3:-82617190 None:intergenic
GCAATGTGGGAGAAACTTTA+AGG 0.207416 3:+82615902 MsG0380016372.01.T01:CDS
ACTATATGTGGTACACTTTC+AGG 0.210126 3:+82617262 MsG0380016372.01.T01:three_prime_UTR
AGTTCAATTCAGCTGAAAAT+TGG 0.226601 3:+82617146 MsG0380016372.01.T01:CDS
TCCTTAAGATGTCCCCATTT+TGG 0.231023 3:-82616488 None:intergenic
AGTGCTTAACCTTGGTTCTA+TGG 0.238870 3:+82618869 MsG0380016372.01.T01:three_prime_UTR
GCCAAGGTATTGGACGATAT+TGG 0.257316 3:+82618915 MsG0380016372.01.T01:three_prime_UTR
GTTTGGTTAGACAACCAAAA+TGG 0.279707 3:+82616474 MsG0380016372.01.T01:CDS
AAAGGGACTTGCTTGGTTAA+TGG 0.283385 3:+82618893 MsG0380016372.01.T01:three_prime_UTR
ATTGAGAGTGAATGCACTTA+TGG 0.293759 3:+82615065 MsG0380016372.01.T01:CDS
TAAATGAAGGTTGGGTTGTT+AGG 0.307229 3:+82618426 MsG0380016372.01.T01:intron
TATGAACAAGGCAACATTAT+AGG 0.308128 3:-82616155 None:intergenic
ATTAATAGTTTACAAGCTTT+TGG 0.309185 3:+82616097 MsG0380016372.01.T01:intron
CAAAGTAAGTTTCAAGAGAA+TGG 0.309642 3:+82615590 MsG0380016372.01.T01:CDS
GTCCATAGTGAAGGCTTGTT+AGG 0.322224 3:-82615936 None:intergenic
TCCCACTGTTGCACTAAGTA+TGG 0.332189 3:-82617754 None:intergenic
TCGAAGTATCGGCAAAATTA+GGG 0.335158 3:-82617189 None:intergenic
CTAAGAACAGATTGTGCATT+AGG 0.335456 3:-82617421 None:intergenic
ACCAAAATGGGGACATCTTA+AGG 0.354053 3:+82616487 MsG0380016372.01.T01:CDS
TAATTACTCATGGGGATATC+AGG 0.358295 3:+82618156 MsG0380016372.01.T01:three_prime_UTR
GAAGGCTTGTTAGGGAGGTT+TGG 0.364373 3:-82615927 None:intergenic
TCACTTCTAAATACAATTCC+AGG 0.376793 3:-82615246 None:intergenic
TAATTGTGGTTTCATTGCTC+TGG 0.381958 3:-82617122 None:intergenic
GCTGTAGGGGTCTACCATTA+TGG 0.382065 3:+82615211 MsG0380016372.01.T01:intron
TAAACCACTCACATGGTATC+AGG 0.384274 3:+82618518 MsG0380016372.01.T01:three_prime_UTR
CCAAGGTATTGGACGATATT+GGG 0.385483 3:+82618916 MsG0380016372.01.T01:three_prime_UTR
ATGTAGATTGAGAATGAATA+TGG 0.390011 3:+82615560 MsG0380016372.01.T01:intron
TAGTGGAAGGTTTGATTTAG+TGG 0.394049 3:+82614983 MsG0380016372.01.T01:CDS
TTGGTTAATGGCCAAGGTAT+TGG 0.395950 3:+82618905 MsG0380016372.01.T01:three_prime_UTR
TGTTCACAACCTCTACTTGA+TGG 0.396063 3:+82616533 MsG0380016372.01.T01:CDS
TGGGCTGCCACCAATGGCCG+TGG 0.402324 3:+82615627 MsG0380016372.01.T01:CDS
TTATATGTGACCCTTCGAAT+TGG 0.404622 3:+82615035 MsG0380016372.01.T01:CDS
AATTACTGAAATCTCTTCCT+TGG 0.408801 3:-82618138 None:intergenic
TTGGTGGCAGCCCAACGAAT+AGG 0.414079 3:-82615618 None:intergenic
AAAGTAAGTTTCAAGAGAAT+GGG 0.416042 3:+82615591 MsG0380016372.01.T01:CDS
TTTGGTTAGACAACCAAAAT+GGG 0.416446 3:+82616475 MsG0380016372.01.T01:CDS
CTTCACTATGGACAGAGAAT+TGG 0.420589 3:+82615946 MsG0380016372.01.T01:CDS
TTTACTCAAACCAGCAACTT+TGG 0.427160 3:-82618107 None:intergenic
TTATGGTTACATGATGTTCC+TGG 0.429910 3:+82615228 MsG0380016372.01.T01:CDS
AAAATGTCAATCTGATAAAC+GGG 0.436199 3:+82617718 MsG0380016372.01.T01:three_prime_UTR
TCCCTAACAAGCCTTCACTA+TGG 0.436342 3:+82615934 MsG0380016372.01.T01:CDS
TTTCTAGAGACCAAAGTTGC+TGG 0.437416 3:+82618097 MsG0380016372.01.T01:three_prime_UTR
TAGTGCAACAGTGGGATTGC+CGG 0.437529 3:+82617761 MsG0380016372.01.T01:three_prime_UTR
TTGAGAGTGAATGCACTTAT+GGG 0.439807 3:+82615066 MsG0380016372.01.T01:CDS
GAGGCTCCACTGGATGAATA+TGG 0.446906 3:+82616370 MsG0380016372.01.T01:CDS
TAAACCTGGGATAGTATGAT+AGG 0.451854 3:-82615457 None:intergenic
TGGTGGCAGCCCAACGAATA+GGG 0.452366 3:-82615617 None:intergenic
TGTTGTGAAGGAGTTCCATC+TGG 0.453218 3:-82618953 None:intergenic
GAAATTGGTGTTACATCCCT+AGG 0.454150 3:-82616827 None:intergenic
GGAACATCATGTAACCATAA+TGG 0.461861 3:-82615225 None:intergenic
TCTGAAGCTGATCTCAAGTA+TGG 0.472062 3:-82616127 None:intergenic
GTGCTTAACCTTGGTTCTAT+GGG 0.476524 3:+82618870 MsG0380016372.01.T01:three_prime_UTR
CCCAATATCGTCCAATACCT+TGG 0.486272 3:-82618916 None:intergenic
ATGGCCGTGGGACTTCAAAC+CGG 0.487215 3:+82615640 MsG0380016372.01.T01:CDS
AAGGAGTTCCATCTGGTTTG+TGG 0.487600 3:-82618946 None:intergenic
TCCATAGTGAAGGCTTGTTA+GGG 0.488947 3:-82615935 None:intergenic
GTGCATTCACTCTCAATGTA+AGG 0.489049 3:-82615059 None:intergenic
CAATGTGGGAGAAACTTTAA+GGG 0.489483 3:+82615903 MsG0380016372.01.T01:CDS
AACCTTGGTTCTATGGGAAA+GGG 0.490035 3:+82618876 MsG0380016372.01.T01:three_prime_UTR
ATTCGTTGGGCTGCCACCAA+TGG 0.490749 3:+82615621 MsG0380016372.01.T01:CDS
GAGATTTCAGTAATTACTCA+TGG 0.494226 3:+82618146 MsG0380016372.01.T01:three_prime_UTR
TAACCTTGGTTCTATGGGAA+AGG 0.497639 3:+82618875 MsG0380016372.01.T01:three_prime_UTR
AGTGGAAGGTTTGATTTAGT+GGG 0.498332 3:+82614984 MsG0380016372.01.T01:CDS
AATGGGTTACCCTATTCGTT+GGG 0.503041 3:+82615608 MsG0380016372.01.T01:CDS
AAGTGATAATGATCAATTCA+AGG 0.504392 3:+82615263 MsG0380016372.01.T01:CDS
GTTTGAAGTCCCACGGCCAT+TGG 0.504980 3:-82615637 None:intergenic
CTATGGGAAAGGGACTTGCT+TGG 0.505289 3:+82618886 MsG0380016372.01.T01:three_prime_UTR
GCTGCCTTCTTGGAAAATAG+TGG 0.505645 3:+82616803 MsG0380016372.01.T01:CDS
GAATGGGTTACCCTATTCGT+TGG 0.507200 3:+82615607 MsG0380016372.01.T01:CDS
GCCTTGTTCATAGCAAAGAA+AGG 0.509544 3:+82616166 MsG0380016372.01.T01:CDS
TTATTATGATGAGGCTCCAC+TGG 0.510643 3:+82616360 MsG0380016372.01.T01:CDS
GAACCAAGGTTAAGCACTAC+AGG 0.511347 3:-82618864 None:intergenic
AGTTGCTGGTTTGAGTAAAG+TGG 0.516443 3:+82618111 MsG0380016372.01.T01:three_prime_UTR
TGAAGTCCCACGGCCATTGG+TGG 0.524099 3:-82615634 None:intergenic
CTTGGAAAATAGTGGACCTA+GGG 0.539564 3:+82616811 MsG0380016372.01.T01:CDS
CAATGTAAGGTCCAATTCGA+AGG 0.546041 3:-82615046 None:intergenic
AAGATACATCTGACTATATG+TGG 0.549097 3:+82617250 MsG0380016372.01.T01:three_prime_UTR
TGTCTGCTCTTTCGAAGTAT+CGG 0.549534 3:-82617200 None:intergenic
ACTTGCTTGGTTAATGGCCA+AGG 0.549664 3:+82618899 MsG0380016372.01.T01:three_prime_UTR
AGATTTCAGTAATTACTCAT+GGG 0.549878 3:+82618147 MsG0380016372.01.T01:three_prime_UTR
AGGACCTATCATACTATCCC+AGG 0.553587 3:+82615453 MsG0380016372.01.T01:CDS
ACCACATTCGATGCACCAGC+TGG 0.554238 3:+82618834 MsG0380016372.01.T01:three_prime_UTR
CAAGAAGGCAGCACATTCTG+TGG 0.556669 3:-82616792 None:intergenic
AAGTTATGTCAATTATTACA+TGG 0.562787 3:+82616189 MsG0380016372.01.T01:CDS
TCCTTTCTTTGCTATGAACA+AGG 0.565995 3:-82616167 None:intergenic
GCTGAATTGAACTTTAATTG+TGG 0.567491 3:-82617136 None:intergenic
TCTTGGAAAATAGTGGACCT+AGG 0.570208 3:+82616810 MsG0380016372.01.T01:CDS
GAAACATACCATTGTTGTGA+AGG 0.573167 3:-82618965 None:intergenic
CTGTGAGCCTAAGCTGAAGG+TGG 0.573454 3:-82616564 None:intergenic
CATGCAATGGCATGCAATGT+GGG 0.574956 3:+82615889 MsG0380016372.01.T01:CDS
ACTCAAACCACCTTCAGCTT+AGG 0.578526 3:+82616557 MsG0380016372.01.T01:CDS
TATCAAAATTAGTTCCTCCA+TGG 0.578938 3:-82616309 None:intergenic
ACGAATTTGATGCAGTACCA+TGG 0.579385 3:+82616292 MsG0380016372.01.T01:intron
TTGCAAATCTATTCAGTCAG+TGG 0.580451 3:+82618456 MsG0380016372.01.T01:three_prime_UTR
ATAGTGAAGGCTTGTTAGGG+AGG 0.581068 3:-82615932 None:intergenic
GATCCTGTAGTGCTTAACCT+TGG 0.586671 3:+82618861 MsG0380016372.01.T01:three_prime_UTR
TCCATACTTAGTGCAACAGT+GGG 0.588438 3:+82617753 MsG0380016372.01.T01:three_prime_UTR
CAATTCTCTGTCCATAGTGA+AGG 0.589841 3:-82615945 None:intergenic
CAACAATACGCAAGTTACAA+TGG 0.590171 3:+82617692 MsG0380016372.01.T01:three_prime_UTR
GTATCTTTCCACAAACCAGA+TGG 0.590713 3:+82618938 MsG0380016372.01.T01:three_prime_UTR
TGCAGTATGAGTTTAGTGGA+AGG 0.591888 3:+82614970 MsG0380016372.01.T01:CDS
GTTTGAGTTCCATCAAGTAG+AGG 0.592892 3:-82616542 None:intergenic
TTGCTGTGAGCCTAAGCTGA+AGG 0.597462 3:-82616567 None:intergenic
ATGCAGATCAACGCATGCAA+TGG 0.599303 3:+82615876 MsG0380016372.01.T01:intron
GGGCTGCCACCAATGGCCGT+GGG 0.602045 3:+82615628 MsG0380016372.01.T01:CDS
CTCCATACTTAGTGCAACAG+TGG 0.602703 3:+82617752 MsG0380016372.01.T01:three_prime_UTR
ATTAAAGAAATTCAAGCACA+AGG 0.604576 3:+82615011 MsG0380016372.01.T01:CDS
GTGGATCAAGTAAAGTTCAG+TGG 0.607801 3:+82618475 MsG0380016372.01.T01:three_prime_UTR
TTAACTGTAGGTTCTGCACA+TGG 0.608812 3:+82617663 MsG0380016372.01.T01:intron
GCCAGCTGGTGCATCGAATG+TGG 0.611606 3:-82618835 None:intergenic
ACTACAGGATCATTGCCAGC+TGG 0.612769 3:-82618849 None:intergenic
AATAACAGCTTATTATGATG+AGG 0.614024 3:+82616351 MsG0380016372.01.T01:CDS
GATTTCAGTAATTACTCATG+GGG 0.616447 3:+82618148 MsG0380016372.01.T01:three_prime_UTR
ACCATACCATATTCATCCAG+TGG 0.618114 3:-82616376 None:intergenic
GTTCTTAGTATATACAGTCA+AGG 0.620590 3:+82617436 MsG0380016372.01.T01:three_prime_UTR
AGCTGTTATTATGAAAGCAG+AGG 0.636343 3:-82616338 None:intergenic
TTGAGTAAAGTGGAAGTCCA+AGG 0.642100 3:+82618121 MsG0380016372.01.T01:three_prime_UTR
AATGTAAGGTCCAATTCGAA+GGG 0.646920 3:-82615045 None:intergenic
ATGGAACTCCTTCACAACAA+TGG 0.646963 3:+82618957 MsG0380016372.01.T01:three_prime_UTR
GTCCCTTTCCCATAGAACCA+AGG 0.648226 3:-82618878 None:intergenic
CACACCGGTTTGAAGTCCCA+CGG 0.651964 3:-82615644 None:intergenic
AGTATCGGCAAAATTAGGGA+TGG 0.653409 3:-82617185 None:intergenic
GCATGCAATGGCATGCAATG+TGG 0.659047 3:+82615888 MsG0380016372.01.T01:CDS
GCTCTACTAAACCACTCACA+TGG 0.681185 3:+82618511 MsG0380016372.01.T01:three_prime_UTR
TTGGTTAGACAACCAAAATG+GGG 0.683195 3:+82616476 MsG0380016372.01.T01:CDS
AATGTGGGAGAAACTTTAAG+GGG 0.688593 3:+82615904 MsG0380016372.01.T01:CDS
ATTACCTGATACCATGTGAG+TGG 0.707159 3:-82618522 None:intergenic
AATTTGATGCAGTACCATGG+AGG 0.742597 3:+82616295 MsG0380016372.01.T01:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTTGATATGTTAATATTT+GGG + Chr3:82617626-82617645 MsG0380016372.01.T01:intron 10.0%
!! TTTCGTTAAAAAAATATTTA+CGG + Chr3:82618782-82618801 MsG0380016372.01.T01:intron 10.0%
!! AAAAAATTCATAGATAATCT+TGG + Chr3:82618584-82618603 MsG0380016372.01.T01:intron 15.0%
!! CAATTTGATATGTTAATATT+TGG + Chr3:82617625-82617644 MsG0380016372.01.T01:intron 15.0%
!!! AGATTATCTATGAATTTTTT+AGG - Chr3:82618584-82618603 None:intergenic 15.0%
!!! ATATTTGAAATTGTTTTTGT+TGG + Chr3:82615514-82615533 MsG0380016372.01.T01:intron 15.0%
!!! TAATAATATTTTTACGTGTT+GGG + Chr3:82618805-82618824 MsG0380016372.01.T01:intron 15.0%
!!! TAATTTTCTATTTTTCTTCA+CGG + Chr3:82619286-82619305 MsG0380016372.01.T01:intron 15.0%
!!! TAATTTTTGTAACTTATTTG+TGG - Chr3:82617843-82617862 None:intergenic 15.0%
!! AAAAATGTCAATCTGATAAA+CGG + Chr3:82617717-82617736 MsG0380016372.01.T01:three_prime_UTR 20.0%
!! AAGTTATGTCAATTATTACA+TGG + Chr3:82616189-82616208 MsG0380016372.01.T01:CDS 20.0%
!! ACAATTTCAAATATATGTAC+TGG - Chr3:82615508-82615527 None:intergenic 20.0%
!! ACTAGTACTACTTAAATAAA+AGG + Chr3:82616640-82616659 MsG0380016372.01.T01:intron 20.0%
!! AGAATTGATATACCATTATT+TGG + Chr3:82619587-82619606 MsG0380016372.01.T01:three_prime_UTR 20.0%
!! AGTACTAGTTAAAAAAATTG+CGG - Chr3:82616629-82616648 None:intergenic 20.0%
!! ATAGGAAAAAAAACATCTTT+GGG + Chr3:82617537-82617556 MsG0380016372.01.T01:intron 20.0%
!! TAAACATTCTACATATTTCA+TGG - Chr3:82619068-82619087 None:intergenic 20.0%
!! TATCAAATTGTACAATAGAA+AGG - Chr3:82617615-82617634 None:intergenic 20.0%
!! TTGATCAAAGAGTTATAAAA+AGG - Chr3:82619165-82619184 None:intergenic 20.0%
!!! AGTCTTTTTATTTTTCTGAA+AGG + Chr3:82619687-82619706 MsG0380016372.01.T01:three_prime_UTR 20.0%
!!! ATTAATAGTTTACAAGCTTT+TGG + Chr3:82616097-82616116 MsG0380016372.01.T01:intron 20.0%
!!! CAACTGATATTTTTTTATTC+AGG + Chr3:82619368-82619387 MsG0380016372.01.T01:intron 20.0%
!!! CATACGAAATATTTTGAAAT+TGG - Chr3:82616845-82616864 None:intergenic 20.0%
!!! GAATTTTTTAGGAAAGATAA+TGG - Chr3:82618573-82618592 None:intergenic 20.0%
!!! GTAATAATATTTTTACGTGT+TGG + Chr3:82618804-82618823 MsG0380016372.01.T01:intron 20.0%
!!! TAAAAGAAAAACTGCAATTT+TGG - Chr3:82616012-82616031 None:intergenic 20.0%
!!! TAGAATTTTAAATGAAGGTT+GGG + Chr3:82618418-82618437 MsG0380016372.01.T01:intron 20.0%
!!! TGATGTAGAATTTTAAATGA+AGG + Chr3:82618413-82618432 MsG0380016372.01.T01:intron 20.0%
!!! TGTAATCCATAATCTTATTT+TGG - Chr3:82618037-82618056 None:intergenic 20.0%
!!! TTTTTTGACAAAATGTGAAT+TGG + Chr3:82619752-82619771 MsG0380016372.01.T01:three_prime_UTR 20.0%
! AAAATGTCAATCTGATAAAC+GGG + Chr3:82617718-82617737 MsG0380016372.01.T01:three_prime_UTR 25.0%
! AAAGTAAGTTTCAAGAGAAT+GGG + Chr3:82615591-82615610 MsG0380016372.01.T01:CDS 25.0%
! AAATTCATAGATAATCTTGG+AGG + Chr3:82618587-82618606 MsG0380016372.01.T01:intron 25.0%
! AAATTTAGTTAGTGAACTGA+AGG + Chr3:82617053-82617072 MsG0380016372.01.T01:intron 25.0%
! AATAACAGCTTATTATGATG+AGG + Chr3:82616351-82616370 MsG0380016372.01.T01:CDS 25.0%
! AATGTAGCAATGGAAATATT+TGG - Chr3:82615165-82615184 None:intergenic 25.0%
! AATTCATAGATAATCTTGGA+GGG + Chr3:82618588-82618607 MsG0380016372.01.T01:intron 25.0%
! AGATTTCAGTAATTACTCAT+GGG + Chr3:82618147-82618166 MsG0380016372.01.T01:three_prime_UTR 25.0%
! ATATTCATTCTCAATCTACA+TGG - Chr3:82615561-82615580 None:intergenic 25.0%
! ATGTAGATTGAGAATGAATA+TGG + Chr3:82615560-82615579 MsG0380016372.01.T01:intron 25.0%
! ATGTTTATAAACCATGGAAA+AGG + Chr3:82619081-82619100 MsG0380016372.01.T01:intron 25.0%
! ATTAAAGAAATTCAAGCACA+AGG + Chr3:82615011-82615030 MsG0380016372.01.T01:CDS 25.0%
! ATTGACAAATACTATGAAGA+TGG - Chr3:82617875-82617894 None:intergenic 25.0%
! ATTTCTTCTAAATGTAGCAA+TGG - Chr3:82615175-82615194 None:intergenic 25.0%
! CAAGTATTATTTATCATGGA+TGG + Chr3:82615719-82615738 MsG0380016372.01.T01:intron 25.0%
! CTATGTTATTAGTTGTGAAT+TGG + Chr3:82619723-82619742 MsG0380016372.01.T01:three_prime_UTR 25.0%
! CTCTCAAGTATTATTTATCA+TGG + Chr3:82615715-82615734 MsG0380016372.01.T01:intron 25.0%
! GATAGGAAAAAAAACATCTT+TGG + Chr3:82617536-82617555 MsG0380016372.01.T01:intron 25.0%
! GTGCTGAAAATTAAATTTGT+TGG - Chr3:82615100-82615119 None:intergenic 25.0%
! GTTGTAAGTAAATAAATGCT+TGG - Chr3:82619352-82619371 None:intergenic 25.0%
! TAAAACTCATGAAACTACTT+AGG - Chr3:82615799-82615818 None:intergenic 25.0%
! TAATTAAGAATGAATCTTCC+TGG + Chr3:82616594-82616613 MsG0380016372.01.T01:intron 25.0%
! TATATTTCCTTTAGCTATAC+CGG - Chr3:82619658-82619677 None:intergenic 25.0%
! TGATAGCCAAAATAAGATTA+TGG + Chr3:82618028-82618047 MsG0380016372.01.T01:intron 25.0%
! TGTAGAATGTTTATAAACCA+TGG + Chr3:82619075-82619094 MsG0380016372.01.T01:intron 25.0%
! TTAACAATTGAGACAATTAC+CGG - Chr3:82617783-82617802 None:intergenic 25.0%
!! AACAAAAGTTATTGGTAGTT+TGG - Chr3:82615291-82615310 None:intergenic 25.0%
!! AAGTGATAATGATCAATTCA+AGG + Chr3:82615263-82615282 MsG0380016372.01.T01:CDS 25.0%
!! ATGATGTGTGATCTTTTAAA+TGG - Chr3:82619516-82619535 None:intergenic 25.0%
!! CAACATTTTCATTTCCATTT+AGG + Chr3:82619182-82619201 MsG0380016372.01.T01:intron 25.0%
!! CTTTCCTTTTTATTCATCAT+CGG + Chr3:82617804-82617823 MsG0380016372.01.T01:intron 25.0%
!! GTAGAATTTTAAATGAAGGT+TGG + Chr3:82618417-82618436 MsG0380016372.01.T01:intron 25.0%
!! TTCTTATACATTTTAAGCAG+TGG - Chr3:82618327-82618346 None:intergenic 25.0%
!! TTCTTTTTACATGAAGAACT+CGG + Chr3:82618069-82618088 MsG0380016372.01.T01:intron 25.0%
!!! AGGAACTAATTTTGATAGAT+TGG + Chr3:82616315-82616334 MsG0380016372.01.T01:CDS 25.0%
!!! CATATTTTTTATGTTCGTGT+AGG + Chr3:82617081-82617100 MsG0380016372.01.T01:intron 25.0%
!!! CTATACATGTTTTTAACTGT+AGG + Chr3:82617651-82617670 MsG0380016372.01.T01:intron 25.0%
!!! CTCATCGATTTTAAAAGTAA+TGG - Chr3:82617022-82617041 None:intergenic 25.0%
!!! CTGAAAATTAAATTTGTTGG+AGG - Chr3:82615097-82615116 None:intergenic 25.0%
!!! GAATTTCTGCTTATTTTTCT+TGG + Chr3:82616258-82616277 MsG0380016372.01.T01:intron 25.0%
!!! TATCTCAATCTTTCTAAGAT+TGG + Chr3:82618673-82618692 MsG0380016372.01.T01:intron 25.0%
!!! TTTCATCATGTTGACTATTT+TGG - Chr3:82615407-82615426 None:intergenic 25.0%
AACCGACGATATAAAATAGA+CGG - Chr3:82615757-82615776 None:intergenic 30.0%
AACTGTCATTAAGAAAAGGT+TGG - Chr3:82615364-82615383 None:intergenic 30.0%
AAGATACATCTGACTATATG+TGG + Chr3:82617250-82617269 MsG0380016372.01.T01:three_prime_UTR 30.0%
AATATTTCGTATGAATTGCC+TGG + Chr3:82616852-82616871 MsG0380016372.01.T01:intron 30.0%
AATTACTGAAATCTCTTCCT+TGG - Chr3:82618141-82618160 None:intergenic 30.0%
AGCAAATTATCTTATCTCAC+TGG + Chr3:82616048-82616067 MsG0380016372.01.T01:intron 30.0%
AGTACCAAAAATTGAATGCA+TGG - Chr3:82615320-82615339 None:intergenic 30.0%
AGTGGATAATGATAGTTTCA+AGG - Chr3:82618309-82618328 None:intergenic 30.0%
AGTTCAATTCAGCTGAAAAT+TGG + Chr3:82617146-82617165 MsG0380016372.01.T01:CDS 30.0%
ATATTTCGTATGAATTGCCT+GGG + Chr3:82616853-82616872 MsG0380016372.01.T01:intron 30.0%
CAAAGTAAGTTTCAAGAGAA+TGG + Chr3:82615590-82615609 MsG0380016372.01.T01:CDS 30.0%
CATAGTTAGTCACATAACAA+TGG - Chr3:82616441-82616460 None:intergenic 30.0%
CTTCTAAACGATTCAACATT+AGG - Chr3:82615822-82615841 None:intergenic 30.0%
CTTCTTCAAGTATAACAAGT+AGG - Chr3:82619432-82619451 None:intergenic 30.0%
GAGATTTCAGTAATTACTCA+TGG + Chr3:82618146-82618165 MsG0380016372.01.T01:three_prime_UTR 30.0%
GATTTCAGTAATTACTCATG+GGG + Chr3:82618148-82618167 MsG0380016372.01.T01:three_prime_UTR 30.0%
GCTGAATTGAACTTTAATTG+TGG - Chr3:82617139-82617158 None:intergenic 30.0%
GGAAGGAAAACAAAAGTTAT+TGG - Chr3:82615299-82615318 None:intergenic 30.0%
GTCTTAAATACTTTACTCTG+TGG - Chr3:82618995-82619014 None:intergenic 30.0%
GTGAAACTGTCATTAAGAAA+AGG - Chr3:82615368-82615387 None:intergenic 30.0%
GTGGATAATGATAGTTTCAA+GGG - Chr3:82618308-82618327 None:intergenic 30.0%
GTTATACTTGAAGAAGAAAC+CGG + Chr3:82619436-82619455 MsG0380016372.01.T01:three_prime_UTR 30.0%
GTTCTTAGTATATACAGTCA+AGG + Chr3:82617436-82617455 MsG0380016372.01.T01:three_prime_UTR 30.0%
TATCAAAATTAGTTCCTCCA+TGG - Chr3:82616312-82616331 None:intergenic 30.0%
TATGAACAAGGCAACATTAT+AGG - Chr3:82616158-82616177 None:intergenic 30.0%
TCACTTCTAAATACAATTCC+AGG - Chr3:82615249-82615268 None:intergenic 30.0%
TGGATAATGATAGTTTCAAG+GGG - Chr3:82618307-82618326 None:intergenic 30.0%
TGTCAACAATCATCTTAGTA+AGG - Chr3:82617363-82617382 None:intergenic 30.0%
TTATACTTGAAGAAGAAACC+GGG + Chr3:82619437-82619456 MsG0380016372.01.T01:three_prime_UTR 30.0%
TTATGTGACTAACTATGCTA+AGG + Chr3:82616444-82616463 MsG0380016372.01.T01:intron 30.0%
TTGACATGTTGAATTGTTGA+TGG + Chr3:82617377-82617396 MsG0380016372.01.T01:intron 30.0%
TTGCATTGAAGTTTAAACCT+GGG - Chr3:82615473-82615492 None:intergenic 30.0%
TTTGGTTAGACAACCAAAAT+GGG + Chr3:82616475-82616494 MsG0380016372.01.T01:CDS 30.0%
! AATAGTTTACAAGCTTTTGG+TGG + Chr3:82616100-82616119 MsG0380016372.01.T01:intron 30.0%
! ATATACCATTATTTGGCTTC+AGG + Chr3:82619594-82619613 MsG0380016372.01.T01:three_prime_UTR 30.0%
! GACTGATGTCATTTACTTAA+CGG + Chr3:82616070-82616089 MsG0380016372.01.T01:intron 30.0%
! TATAACAGTTACCTTTTCCA+TGG - Chr3:82619095-82619114 None:intergenic 30.0%
! TCTTTTTACATGAAGAACTC+GGG + Chr3:82618070-82618089 MsG0380016372.01.T01:intron 30.0%
!! AATCTTTCTAAGATTGGACA+AGG + Chr3:82618679-82618698 MsG0380016372.01.T01:intron 30.0%
!! ATCTTTCTAAGATTGGACAA+GGG + Chr3:82618680-82618699 MsG0380016372.01.T01:intron 30.0%
!!! AACTCTCAATTTTTTGCTGT+AGG + Chr3:82615196-82615215 MsG0380016372.01.T01:intron 30.0%
!!! ACTCTCAATTTTTTGCTGTA+GGG + Chr3:82615197-82615216 MsG0380016372.01.T01:intron 30.0%
AAATCAATCAGTATCCTACC+AGG + Chr3:82616876-82616895 MsG0380016372.01.T01:intron 35.0%
AAATTGCGGAAAATATGTCC+AGG - Chr3:82616615-82616634 None:intergenic 35.0%
AACATAAGCCTGAAGGAAAA+AGG - Chr3:82616762-82616781 None:intergenic 35.0%
AAGAATGTAGTCTTCAACAC+CGG + Chr3:82616903-82616922 MsG0380016372.01.T01:intron 35.0%
AAGCACTAATCTCATTTCTG+AGG + Chr3:82617499-82617518 MsG0380016372.01.T01:intron 35.0%
AATGTAAGGTCCAATTCGAA+GGG - Chr3:82615048-82615067 None:intergenic 35.0%
AATGTGGGAGAAACTTTAAG+GGG + Chr3:82615904-82615923 MsG0380016372.01.T01:CDS 35.0%
ACTATATGTGGTACACTTTC+AGG + Chr3:82617262-82617281 MsG0380016372.01.T01:three_prime_UTR 35.0%
AGAATCTAGCACAAAGTAGT+AGG - Chr3:82618654-82618673 None:intergenic 35.0%
AGCTGTTATTATGAAAGCAG+AGG - Chr3:82616341-82616360 None:intergenic 35.0%
AGGATCATGTTTCTTAGGAT+AGG + Chr3:82617519-82617538 MsG0380016372.01.T01:intron 35.0%
AGTAGGAGAAACAAAAACCA+AGG - Chr3:82618637-82618656 None:intergenic 35.0%
ATGGTCAAATCAAGTAAAGC+AGG - Chr3:82617003-82617022 None:intergenic 35.0%
ATTATCGTATGACTGAACAC+AGG - Chr3:82619561-82619580 None:intergenic 35.0%
ATTGAGAGTGAATGCACTTA+TGG + Chr3:82615065-82615084 MsG0380016372.01.T01:CDS 35.0%
CAACAATACGCAAGTTACAA+TGG + Chr3:82617692-82617711 MsG0380016372.01.T01:three_prime_UTR 35.0%
CAATGTGGGAGAAACTTTAA+GGG + Chr3:82615903-82615922 MsG0380016372.01.T01:CDS 35.0%
CCAAAAATTGAATGCATGGA+AGG - Chr3:82615316-82615335 None:intergenic 35.0%
CTAAGAACAGATTGTGCATT+AGG - Chr3:82617424-82617443 None:intergenic 35.0%
CTAGGTAGAAGAAACTTCAA+TGG - Chr3:82617922-82617941 None:intergenic 35.0%
CTTGCCGATGATGAATAAAA+AGG - Chr3:82617811-82617830 None:intergenic 35.0%
GAAACATACCATTGTTGTGA+AGG - Chr3:82618968-82618987 None:intergenic 35.0%
GACTGTTTAGAAGACCTAAA+TGG - Chr3:82619199-82619218 None:intergenic 35.0%
GGAACATCATGTAACCATAA+TGG - Chr3:82615228-82615247 None:intergenic 35.0%
GTTCTTTCCTAAAATCGACT+GGG + Chr3:82619404-82619423 MsG0380016372.01.T01:three_prime_UTR 35.0%
GTTGCATTGAAGTTTAAACC+TGG - Chr3:82615474-82615493 None:intergenic 35.0%
GTTTGGTTAGACAACCAAAA+TGG + Chr3:82616474-82616493 MsG0380016372.01.T01:CDS 35.0%
TAAACCTGGGATAGTATGAT+AGG - Chr3:82615460-82615479 None:intergenic 35.0%
TAAATGCTTAGCAGTTATGC+TGG - Chr3:82618729-82618748 None:intergenic 35.0%
TAATTACTCATGGGGATATC+AGG + Chr3:82618156-82618175 MsG0380016372.01.T01:three_prime_UTR 35.0%
TAATTGTGGTTTCATTGCTC+TGG - Chr3:82617125-82617144 None:intergenic 35.0%
TCCTTGTGAAGCAAAAAGAT+TGG - Chr3:82615434-82615453 None:intergenic 35.0%
TTATATGTGACCCTTCGAAT+TGG + Chr3:82615035-82615054 MsG0380016372.01.T01:CDS 35.0%
TTATCGTATGACTGAACACA+GGG - Chr3:82619560-82619579 None:intergenic 35.0%
TTATGGTTACATGATGTTCC+TGG + Chr3:82615228-82615247 MsG0380016372.01.T01:CDS 35.0%
TTGAGAGTGAATGCACTTAT+GGG + Chr3:82615066-82615085 MsG0380016372.01.T01:CDS 35.0%
TTGCAAATCTATTCAGTCAG+TGG + Chr3:82618456-82618475 MsG0380016372.01.T01:three_prime_UTR 35.0%
TTGGTTAGACAACCAAAATG+GGG + Chr3:82616476-82616495 MsG0380016372.01.T01:CDS 35.0%
TTTACTCAAACCAGCAACTT+TGG - Chr3:82618110-82618129 None:intergenic 35.0%
! AACATTCGATTTTACCTTGC+CGG - Chr3:82616925-82616944 None:intergenic 35.0%
! AACCAAGGTCTTTAAGAGAT+TGG - Chr3:82618622-82618641 None:intergenic 35.0%
! AATCTTTTTGCTTCACAAGG+AGG + Chr3:82615433-82615452 MsG0380016372.01.T01:CDS 35.0%
! ACCAAGGTCTTTAAGAGATT+GGG - Chr3:82618621-82618640 None:intergenic 35.0%
! AGTCTTGTGATCTCAAATCT+AGG - Chr3:82617940-82617959 None:intergenic 35.0%
! AGTGGAAGGTTTGATTTAGT+GGG + Chr3:82614984-82615003 MsG0380016372.01.T01:CDS 35.0%
! CCTTCCATGCATTCAATTTT+TGG + Chr3:82615313-82615332 MsG0380016372.01.T01:intron 35.0%
! CTCCGTCTATTTTATATCGT+CGG + Chr3:82615752-82615771 MsG0380016372.01.T01:intron 35.0%
! CTTTTGCAGTATGAGTTTAG+TGG + Chr3:82614966-82614985 MsG0380016372.01.T01:CDS 35.0%
! GATGTCATTTACTTAACGGT+TGG + Chr3:82616074-82616093 MsG0380016372.01.T01:intron 35.0%
! GATTTGAGATCACAAGACTA+TGG + Chr3:82617941-82617960 MsG0380016372.01.T01:intron 35.0%
! GTGTGATCTTTTAAATGGAG+AGG - Chr3:82619511-82619530 None:intergenic 35.0%
! GTTTTGCATTCTTTCGTCAA+TGG + Chr3:82617463-82617482 MsG0380016372.01.T01:three_prime_UTR 35.0%
! TAAATGAAGGTTGGGTTGTT+AGG + Chr3:82618426-82618445 MsG0380016372.01.T01:intron 35.0%
! TAGTGGAAGGTTTGATTTAG+TGG + Chr3:82614983-82615002 MsG0380016372.01.T01:CDS 35.0%
! TCCTTTCTTTGCTATGAACA+AGG - Chr3:82616170-82616189 None:intergenic 35.0%
! TCTTGTTTACACATCATCCA+AGG - Chr3:82615670-82615689 None:intergenic 35.0%
! TTCAGCTAAGTTGAAAGAGA+AGG - Chr3:82616241-82616260 None:intergenic 35.0%
! TTCTGAAAACATAAGCCTGA+AGG - Chr3:82616769-82616788 None:intergenic 35.0%
! TTCTGAGGATCATGTTTCTT+AGG + Chr3:82617514-82617533 MsG0380016372.01.T01:intron 35.0%
! TTTTCTCACCTTTTTCCTTC+AGG + Chr3:82616751-82616770 MsG0380016372.01.T01:intron 35.0%
!! TCGAAGTATCGGCAAAATTA+GGG - Chr3:82617192-82617211 None:intergenic 35.0%
!! TTCGAAGTATCGGCAAAATT+AGG - Chr3:82617193-82617212 None:intergenic 35.0%
!! TTCGTCAATGGAGTTTTAAC+AGG + Chr3:82617475-82617494 MsG0380016372.01.T01:three_prime_UTR 35.0%
!!! CTCTCAATTTTTTGCTGTAG+GGG + Chr3:82615198-82615217 MsG0380016372.01.T01:intron 35.0%
AATTCTACATCAGCATGCAG+TGG - Chr3:82618405-82618424 None:intergenic 40.0%
AATTTGATGCAGTACCATGG+AGG + Chr3:82616295-82616314 MsG0380016372.01.T01:intron 40.0%
ACATCTTTGGGCAAAAGACT+TGG + Chr3:82617549-82617568 MsG0380016372.01.T01:intron 40.0%
ACCAAAATGGGGACATCTTA+AGG + Chr3:82616487-82616506 MsG0380016372.01.T01:CDS 40.0%
ACCATACCATATTCATCCAG+TGG - Chr3:82616379-82616398 None:intergenic 40.0%
ACCCAATCTCTTAAAGACCT+TGG + Chr3:82618617-82618636 MsG0380016372.01.T01:intron 40.0%
ACGAATTTGATGCAGTACCA+TGG + Chr3:82616292-82616311 MsG0380016372.01.T01:intron 40.0%
AGAGAAGGAGGAGCAATTAT+AGG - Chr3:82616226-82616245 None:intergenic 40.0%
ATGGAACTCCTTCACAACAA+TGG + Chr3:82618957-82618976 MsG0380016372.01.T01:three_prime_UTR 40.0%
ATTACCTGATACCATGTGAG+TGG - Chr3:82618525-82618544 None:intergenic 40.0%
ATTTCCTTTAGCTATACCGG+TGG - Chr3:82619655-82619674 None:intergenic 40.0%
CAAACATTCTTTAGTGCAGC+TGG - Chr3:82617312-82617331 None:intergenic 40.0%
CAATGTAAGGTCCAATTCGA+AGG - Chr3:82615049-82615068 None:intergenic 40.0%
CAATTCTCTGTCCATAGTGA+AGG - Chr3:82615948-82615967 None:intergenic 40.0%
CGTTCTTTCCTAAAATCGAC+TGG + Chr3:82619403-82619422 MsG0380016372.01.T01:three_prime_UTR 40.0%
CTAACTATGCTAAGGTAACC+AGG + Chr3:82616452-82616471 MsG0380016372.01.T01:intron 40.0%
CTTCACTATGGACAGAGAAT+TGG + Chr3:82615946-82615965 MsG0380016372.01.T01:CDS 40.0%
GCAATGTGGGAGAAACTTTA+AGG + Chr3:82615902-82615921 MsG0380016372.01.T01:CDS 40.0%
GTGAACCTGAAGCCAAATAA+TGG - Chr3:82619602-82619621 None:intergenic 40.0%
GTGCATTCACTCTCAATGTA+AGG - Chr3:82615062-82615081 None:intergenic 40.0%
GTGGATCAAGTAAAGTTCAG+TGG + Chr3:82618475-82618494 MsG0380016372.01.T01:three_prime_UTR 40.0%
TAAACCACTCACATGGTATC+AGG + Chr3:82618518-82618537 MsG0380016372.01.T01:three_prime_UTR 40.0%
TAAGATTGGACAAGGGATGA+AGG + Chr3:82618687-82618706 MsG0380016372.01.T01:intron 40.0%
TATGCTAAGGTAACCAGGTT+TGG + Chr3:82616457-82616476 MsG0380016372.01.T01:intron 40.0%
TCCACTGGATGAATATGGTA+TGG + Chr3:82616375-82616394 MsG0380016372.01.T01:intron 40.0%
TCCATACTTAGTGCAACAGT+GGG + Chr3:82617753-82617772 MsG0380016372.01.T01:three_prime_UTR 40.0%
TGCAGTATGAGTTTAGTGGA+AGG + Chr3:82614970-82614989 MsG0380016372.01.T01:CDS 40.0%
TGTCTGCTCTTTCGAAGTAT+CGG - Chr3:82617203-82617222 None:intergenic 40.0%
TGTTCACAACCTCTACTTGA+TGG + Chr3:82616533-82616552 MsG0380016372.01.T01:CDS 40.0%
TTAACTGTAGGTTCTGCACA+TGG + Chr3:82617663-82617682 MsG0380016372.01.T01:intron 40.0%
TTATTATGATGAGGCTCCAC+TGG + Chr3:82616360-82616379 MsG0380016372.01.T01:CDS 40.0%
TTGAGTAAAGTGGAAGTCCA+AGG + Chr3:82618121-82618140 MsG0380016372.01.T01:three_prime_UTR 40.0%
TTGGTTAATGGCCAAGGTAT+TGG + Chr3:82618905-82618924 MsG0380016372.01.T01:three_prime_UTR 40.0%
TTTGGTTGTCTAACCAAACC+TGG - Chr3:82616473-82616492 None:intergenic 40.0%
! AAAGGGACTTGCTTGGTTAA+TGG + Chr3:82618893-82618912 MsG0380016372.01.T01:three_prime_UTR 40.0%
! AGCTAAGTTGAAAGAGAAGG+AGG - Chr3:82616238-82616257 None:intergenic 40.0%
! AGGATACTGATTGATTTCCC+AGG - Chr3:82616873-82616892 None:intergenic 40.0%
! AGGTCCACTATTTTCCAAGA+AGG - Chr3:82616810-82616829 None:intergenic 40.0%
! AGGTCTTTAAGAGATTGGGT+TGG - Chr3:82618617-82618636 None:intergenic 40.0%
! GCCAATCTTTTTGCTTCACA+AGG + Chr3:82615430-82615449 MsG0380016372.01.T01:CDS 40.0%
! GCCTTGTTCATAGCAAAGAA+AGG + Chr3:82616166-82616185 MsG0380016372.01.T01:CDS 40.0%
! GCTTCAGGTTCACTCTAAAA+GGG + Chr3:82619609-82619628 MsG0380016372.01.T01:three_prime_UTR 40.0%
! GTGTCTAGAGTGATTCCTAA+GGG - Chr3:82619466-82619485 None:intergenic 40.0%
! GTTTGAGTTCCATCAAGTAG+AGG - Chr3:82616545-82616564 None:intergenic 40.0%
! TCCTTAAGATGTCCCCATTT+TGG - Chr3:82616491-82616510 None:intergenic 40.0%
! TCTGAAGCTGATCTCAAGTA+TGG - Chr3:82616130-82616149 None:intergenic 40.0%
! TGTCTAGAGTGATTCCTAAG+GGG - Chr3:82619465-82619484 None:intergenic 40.0%
! TGTGTCTAGAGTGATTCCTA+AGG - Chr3:82619467-82619486 None:intergenic 40.0%
! TTTCTAGAGACCAAAGTTGC+TGG + Chr3:82618097-82618116 MsG0380016372.01.T01:three_prime_UTR 40.0%
!! AACCTTGGTTCTATGGGAAA+GGG + Chr3:82618876-82618895 MsG0380016372.01.T01:three_prime_UTR 40.0%
!! AATGGGTTACCCTATTCGTT+GGG + Chr3:82615608-82615627 MsG0380016372.01.T01:CDS 40.0%
!! AGTATCGGCAAAATTAGGGA+TGG - Chr3:82617188-82617207 None:intergenic 40.0%
!! AGTGCTTAACCTTGGTTCTA+TGG + Chr3:82618869-82618888 MsG0380016372.01.T01:three_prime_UTR 40.0%
!! AGTTGCTGGTTTGAGTAAAG+TGG + Chr3:82618111-82618130 MsG0380016372.01.T01:three_prime_UTR 40.0%
!! CCAAGGTATTGGACGATATT+GGG + Chr3:82618916-82618935 MsG0380016372.01.T01:three_prime_UTR 40.0%
!! CTTGGAAAATAGTGGACCTA+GGG + Chr3:82616811-82616830 MsG0380016372.01.T01:CDS 40.0%
!! GAAATTGGTGTTACATCCCT+AGG - Chr3:82616830-82616849 None:intergenic 40.0%
!! GTCGATTTTAGGAAAGAACG+TGG - Chr3:82619403-82619422 None:intergenic 40.0%
!! GTGCTTAACCTTGGTTCTAT+GGG + Chr3:82618870-82618889 MsG0380016372.01.T01:three_prime_UTR 40.0%
!! TAACCTTGGTTCTATGGGAA+AGG + Chr3:82618875-82618894 MsG0380016372.01.T01:three_prime_UTR 40.0%
!! TCCATAGTGAAGGCTTGTTA+GGG - Chr3:82615938-82615957 None:intergenic 40.0%
!! TCTTGGAAAATAGTGGACCT+AGG + Chr3:82616810-82616829 MsG0380016372.01.T01:CDS 40.0%
!! TGTTGAATTGTTGATGGTGC+AGG + Chr3:82617383-82617402 MsG0380016372.01.T01:intron 40.0%
AAGACTACATTCTTGCAGCC+TGG - Chr3:82616897-82616916 None:intergenic 45.0%
ACTCAAACCACCTTCAGCTT+AGG + Chr3:82616557-82616576 MsG0380016372.01.T01:CDS 45.0%
ACTTGCTTGGTTAATGGCCA+AGG + Chr3:82618899-82618918 MsG0380016372.01.T01:three_prime_UTR 45.0%
AGGACCTATCATACTATCCC+AGG + Chr3:82615453-82615472 MsG0380016372.01.T01:CDS 45.0%
ATACTTGAGAGACTGACCAC+TGG - Chr3:82615706-82615725 None:intergenic 45.0%
ATGCAGATCAACGCATGCAA+TGG + Chr3:82615876-82615895 MsG0380016372.01.T01:intron 45.0%
CATGCAATGGCATGCAATGT+GGG + Chr3:82615889-82615908 MsG0380016372.01.T01:CDS 45.0%
CCCAATATCGTCCAATACCT+TGG - Chr3:82618919-82618938 None:intergenic 45.0%
CTCCATACTTAGTGCAACAG+TGG + Chr3:82617752-82617771 MsG0380016372.01.T01:three_prime_UTR 45.0%
GAACCAAGGTTAAGCACTAC+AGG - Chr3:82618867-82618886 None:intergenic 45.0%
GATCCTGTAGTGCTTAACCT+TGG + Chr3:82618861-82618880 MsG0380016372.01.T01:three_prime_UTR 45.0%
GCTCTACTAAACCACTCACA+TGG + Chr3:82618511-82618530 MsG0380016372.01.T01:three_prime_UTR 45.0%
GCTGCCTTCTTGGAAAATAG+TGG + Chr3:82616803-82616822 MsG0380016372.01.T01:CDS 45.0%
TCCCACTGTTGCACTAAGTA+TGG - Chr3:82617757-82617776 None:intergenic 45.0%
TCCCTAACAAGCCTTCACTA+TGG + Chr3:82615934-82615953 MsG0380016372.01.T01:CDS 45.0%
TCTTACAAGCAAAGAGCCAC+CGG + Chr3:82619636-82619655 MsG0380016372.01.T01:three_prime_UTR 45.0%
TGTTGTGAAGGAGTTCCATC+TGG - Chr3:82618956-82618975 None:intergenic 45.0%
! AAGGAGTTCCATCTGGTTTG+TGG - Chr3:82618949-82618968 None:intergenic 45.0%
! GGCTTCAGGTTCACTCTAAA+AGG + Chr3:82619608-82619627 MsG0380016372.01.T01:three_prime_UTR 45.0%
! GTCCATAGTGAAGGCTTGTT+AGG - Chr3:82615939-82615958 None:intergenic 45.0%
!! ATAGTGAAGGCTTGTTAGGG+AGG - Chr3:82615935-82615954 None:intergenic 45.0%
!! GAATGGGTTACCCTATTCGT+TGG + Chr3:82615607-82615626 MsG0380016372.01.T01:CDS 45.0%
!! GCCAAGGTATTGGACGATAT+TGG + Chr3:82618915-82618934 MsG0380016372.01.T01:three_prime_UTR 45.0%
!! GTAGGTTCCCAGTCGATTTT+AGG - Chr3:82619414-82619433 None:intergenic 45.0%
ACACATCATCCAAGGCACAC+CGG - Chr3:82615662-82615681 None:intergenic 50.0%
ACTACAGGATCATTGCCAGC+TGG - Chr3:82618852-82618871 None:intergenic 50.0%
AGAGCCACCGGTATAGCTAA+AGG + Chr3:82619648-82619667 MsG0380016372.01.T01:three_prime_UTR 50.0%
AGATGATGCTCCTGATCCAG+TGG + Chr3:82615687-82615706 MsG0380016372.01.T01:intron 50.0%
AGTGATTCCTAAGGGGTTCC+CGG - Chr3:82619458-82619477 None:intergenic 50.0%
CAAGAAGGCAGCACATTCTG+TGG - Chr3:82616795-82616814 None:intergenic 50.0%
CACAGAATGTGCTGCCTTCT+TGG + Chr3:82616793-82616812 MsG0380016372.01.T01:CDS 50.0%
CTACATTCTTGCAGCCTGGT+AGG - Chr3:82616893-82616912 None:intergenic 50.0%
GAGGCTCCACTGGATGAATA+TGG + Chr3:82616370-82616389 MsG0380016372.01.T01:CDS 50.0%
GCATGCAATGGCATGCAATG+TGG + Chr3:82615888-82615907 MsG0380016372.01.T01:CDS 50.0%
GCTGTAGGGGTCTACCATTA+TGG + Chr3:82615211-82615230 MsG0380016372.01.T01:intron 50.0%
GTCCCTTTCCCATAGAACCA+AGG - Chr3:82618881-82618900 None:intergenic 50.0%
TAGTGCAACAGTGGGATTGC+CGG + Chr3:82617761-82617780 MsG0380016372.01.T01:three_prime_UTR 50.0%
TGTAGTCTTCAACACCGGCA+AGG + Chr3:82616908-82616927 MsG0380016372.01.T01:intron 50.0%
TTGCTGTGAGCCTAAGCTGA+AGG - Chr3:82616570-82616589 None:intergenic 50.0%
! CTATGGGAAAGGGACTTGCT+TGG + Chr3:82618886-82618905 MsG0380016372.01.T01:three_prime_UTR 50.0%
!! GAAGGCTTGTTAGGGAGGTT+TGG - Chr3:82615930-82615949 None:intergenic 50.0%
ACCACATTCGATGCACCAGC+TGG + Chr3:82618834-82618853 MsG0380016372.01.T01:three_prime_UTR 55.0%
ATGGCCGTGGGACTTCAAAC+CGG + Chr3:82615640-82615659 MsG0380016372.01.T01:CDS 55.0%
ATTCGTTGGGCTGCCACCAA+TGG + Chr3:82615621-82615640 MsG0380016372.01.T01:CDS 55.0%
CTGTGAGCCTAAGCTGAAGG+TGG - Chr3:82616567-82616586 None:intergenic 55.0%
GAAGAAACCGGGAACCCCTT+AGG + Chr3:82619448-82619467 MsG0380016372.01.T01:three_prime_UTR 55.0%
GACTTCAAACCGGTGTGCCT+TGG + Chr3:82615650-82615669 MsG0380016372.01.T01:intron 55.0%
GAGAGACTGACCACTGGATC+AGG - Chr3:82615700-82615719 None:intergenic 55.0%
TGGTGGCAGCCCAACGAATA+GGG - Chr3:82615620-82615639 None:intergenic 55.0%
! GTTTGAAGTCCCACGGCCAT+TGG - Chr3:82615640-82615659 None:intergenic 55.0%
! TTGGTGGCAGCCCAACGAAT+AGG - Chr3:82615621-82615640 None:intergenic 55.0%
!! CACACCGGTTTGAAGTCCCA+CGG - Chr3:82615647-82615666 None:intergenic 55.0%
GCCAGCTGGTGCATCGAATG+TGG - Chr3:82618838-82618857 None:intergenic 60.0%
TGAAGTCCCACGGCCATTGG+TGG - Chr3:82615637-82615656 None:intergenic 60.0%
GGGCTGCCACCAATGGCCGT+GGG + Chr3:82615628-82615647 MsG0380016372.01.T01:CDS 70.0%
TGGGCTGCCACCAATGGCCG+TGG + Chr3:82615627-82615646 MsG0380016372.01.T01:CDS 70.0%
Chromosome Type Strat End Strand Name
Chr3 gene 82614945 82619785 82614945 ID=MsG0380016372.01;Name=MsG0380016372.01
Chr3 mRNA 82614945 82619785 82614945 ID=MsG0380016372.01.T01;Parent=MsG0380016372.01;Name=MsG0380016372.01.T01;_AED=0.34;_eAED=0.34;_QI=0|0.86|0.81|1|0.66|0.75|16|993|339
Chr3 exon 82614945 82615087 82614945 ID=MsG0380016372.01.T01:exon:33107;Parent=MsG0380016372.01.T01
Chr3 exon 82615218 82615284 82615218 ID=MsG0380016372.01.T01:exon:33108;Parent=MsG0380016372.01.T01
Chr3 exon 82615382 82615474 82615382 ID=MsG0380016372.01.T01:exon:33109;Parent=MsG0380016372.01.T01
Chr3 exon 82615566 82615661 82615566 ID=MsG0380016372.01.T01:exon:33110;Parent=MsG0380016372.01.T01
Chr3 exon 82615882 82615976 82615882 ID=MsG0380016372.01.T01:exon:33111;Parent=MsG0380016372.01.T01
Chr3 exon 82616105 82616210 82616105 ID=MsG0380016372.01.T01:exon:33112;Parent=MsG0380016372.01.T01
Chr3 exon 82616307 82616391 82616307 ID=MsG0380016372.01.T01:exon:33113;Parent=MsG0380016372.01.T01
Chr3 exon 82616474 82616592 82616474 ID=MsG0380016372.01.T01:exon:33114;Parent=MsG0380016372.01.T01
Chr3 exon 82616773 82616859 82616773 ID=MsG0380016372.01.T01:exon:33115;Parent=MsG0380016372.01.T01
Chr3 exon 82617103 82617283 82617103 ID=MsG0380016372.01.T01:exon:33116;Parent=MsG0380016372.01.T01
Chr3 exon 82617405 82617496 82617405 ID=MsG0380016372.01.T01:exon:33117;Parent=MsG0380016372.01.T01
Chr3 exon 82617673 82617782 82617673 ID=MsG0380016372.01.T01:exon:33118;Parent=MsG0380016372.01.T01
Chr3 exon 82618085 82618177 82618085 ID=MsG0380016372.01.T01:exon:33119;Parent=MsG0380016372.01.T01
Chr3 exon 82618435 82618539 82618435 ID=MsG0380016372.01.T01:exon:33120;Parent=MsG0380016372.01.T01
Chr3 exon 82618834 82618978 82618834 ID=MsG0380016372.01.T01:exon:33121;Parent=MsG0380016372.01.T01
Chr3 CDS 82614945 82615087 82614945 ID=MsG0380016372.01.T01:cds;Parent=MsG0380016372.01.T01
Chr3 CDS 82615218 82615284 82615218 ID=MsG0380016372.01.T01:cds;Parent=MsG0380016372.01.T01
Chr3 CDS 82615382 82615474 82615382 ID=MsG0380016372.01.T01:cds;Parent=MsG0380016372.01.T01
Chr3 CDS 82615566 82615661 82615566 ID=MsG0380016372.01.T01:cds;Parent=MsG0380016372.01.T01
Chr3 CDS 82615882 82615976 82615882 ID=MsG0380016372.01.T01:cds;Parent=MsG0380016372.01.T01
Chr3 CDS 82616105 82616210 82616105 ID=MsG0380016372.01.T01:cds;Parent=MsG0380016372.01.T01
Chr3 CDS 82616307 82616391 82616307 ID=MsG0380016372.01.T01:cds;Parent=MsG0380016372.01.T01
Chr3 CDS 82616474 82616592 82616474 ID=MsG0380016372.01.T01:cds;Parent=MsG0380016372.01.T01
Chr3 CDS 82616773 82616859 82616773 ID=MsG0380016372.01.T01:cds;Parent=MsG0380016372.01.T01
Chr3 CDS 82617103 82617231 82617103 ID=MsG0380016372.01.T01:cds;Parent=MsG0380016372.01.T01
Chr3 three_prime_UTR 82617232 82617283 82617232 ID=MsG0380016372.01.T01:three_prime_utr;Parent=MsG0380016372.01.T01
Chr3 three_prime_UTR 82617405 82617496 82617405 ID=MsG0380016372.01.T01:three_prime_utr;Parent=MsG0380016372.01.T01
Chr3 three_prime_UTR 82617673 82617782 82617673 ID=MsG0380016372.01.T01:three_prime_utr;Parent=MsG0380016372.01.T01
Chr3 three_prime_UTR 82618085 82618177 82618085 ID=MsG0380016372.01.T01:three_prime_utr;Parent=MsG0380016372.01.T01
Chr3 three_prime_UTR 82618435 82618539 82618435 ID=MsG0380016372.01.T01:three_prime_utr;Parent=MsG0380016372.01.T01
Chr3 three_prime_UTR 82618834 82618978 82618834 ID=MsG0380016372.01.T01:three_prime_utr;Parent=MsG0380016372.01.T01
Chr3 three_prime_UTR 82619390 82619785 82619390 ID=MsG0380016372.01.T01:three_prime_utr;Parent=MsG0380016372.01.T01
Chr3 mRNA 82618429 82619785 82618429 ID=MsG0380016372.01.T02;Parent=MsG0380016372.01;Name=MsG0380016372.01.T02;_AED=0.45;_eAED=0.45;_QI=0|0.5|0.33|1|0.5|0.66|3|281|109
Chr3 exon 82618429 82618539 82618429 ID=MsG0380016372.01.T02:exon:33123;Parent=MsG0380016372.01.T02
Chr3 exon 82618834 82618937 82618834 ID=MsG0380016372.01.T02:exon:33124;Parent=MsG0380016372.01.T02
Chr3 CDS 82618429 82618539 82618429 ID=MsG0380016372.01.T02:cds;Parent=MsG0380016372.01.T02
Chr3 CDS 82618834 82618937 82618834 ID=MsG0380016372.01.T02:cds;Parent=MsG0380016372.01.T02
Chr3 CDS 82619390 82619504 82619390 ID=MsG0380016372.01.T02:cds;Parent=MsG0380016372.01.T02
Chr3 three_prime_UTR 82619505 82619785 82619505 ID=MsG0380016372.01.T02:three_prime_utr;Parent=MsG0380016372.01.T02
Chr3 mRNA 82617657 82618195 82617657 ID=MsG0380016372.01.T03;Parent=MsG0380016372.01;Name=MsG0380016372.01.T03;_AED=0.48;_eAED=0.54;_QI=0|1|0|1|1|1|2|0|78
Chr3 exon 82617657 82617782 82617657 ID=MsG0380016372.01.T03:exon:33125;Parent=MsG0380016372.01.T03
Chr3 exon 82618085 82618195 82618085 ID=MsG0380016372.01.T03:exon:33126;Parent=MsG0380016372.01.T03
Chr3 CDS 82617657 82617782 82617657 ID=MsG0380016372.01.T03:cds;Parent=MsG0380016372.01.T03
Chr3 CDS 82618085 82618195 82618085 ID=MsG0380016372.01.T03:cds;Parent=MsG0380016372.01.T03
Gene Sequence

>MsG0380016372.01.T03

ATGTTTTTAACTGTAGGTTCTGCACATGGAAGTCGCAACAATACGCAAGTTACAATGGAGAAAAATGTCAATCTGATAAACGGGATGAACAACATCTCCATACTTAGTGCAACAGTGGGATTGCCGAACTCGGGAGCATTTCTAGAGACCAAAGTTGCTGGTTTGAGTAAAGTGGAAGTCCAAGGAAGAGATTTCAGTAATTACTCATGGGGATATCAGGTGATTATCTCTGCATAA

>MsG0380016372.01.T02

ATGAAGGTTGGGTTGTTAGGAGAAAAATTGCAAATCTATTCAGTCAGTGGATCAAGTAAAGTTCAGTGGAAAAGTTTTCAAAGCTCTACTAAACCACTCACATGGTATCAGACCACATTCGATGCACCAGCTGGCAATGATCCTGTAGTGCTTAACCTTGGTTCTATGGGAAAGGGACTTGCTTGGTTAATGGCCAAGGTATTGGACGATATTGGGTATCACATACCACGTTCTTTCCTAAAATCGACTGGGAACCTACTTGTTATACTTGAAGAAGAAACCGGGAACCCCTTAGGAATCACTCTAGACACAGTATACATCAAGAATTGA

>MsG0380016372.01.T01

ATGGTTGTGATTTTTGACTTGCTTTTGCAGTATGAGTTTAGTGGAAGGTTTGATTTAGTGGGATTCATTAAAGAAATTCAAGCACAAGGTTTATATGTGACCCTTCGAATTGGACCTTACATTGAGAGTGAATGCACTTATGGGGGTCTACCATTATGGTTACATGATGTTCCTGGAATTGTATTTAGAAGTGATAATGATCAATTCAAGTTTCACATGCAAAGATTCACTACCAAAATAGTCAACATGATGAAATCAGCCAATCTTTTTGCTTCACAAGGAGGACCTATCATACTATCCCAGATTGAGAATGAATATGGCAGCATTCAAAGTAAGTTTCAAGAGAATGGGTTACCCTATTCGTTGGGCTGCCACCAATGGCCGTGGGACTTCAAACCGATCAACGCATGCAATGGCATGCAATGTGGGAGAAACTTTAAGGGGCCAAACCTCCCTAACAAGCCTTCACTATGGACAGAGAATTGGACTAGCTTTTTACAAGCTTTTGGTGGAGCACCATACTTGAGATCAGCTTCAGACATTGCCTATAATGTTGCCTTGTTCATAGCAAAGAAAGGAAGTTATGTCAATTATTACATGTACCATGGAGGAACTAATTTTGATAGATTGGCCTCTGCTTTCATAATAACAGCTTATTATGATGAGGCTCCACTGGATGAATATGGTTTGGTTAGACAACCAAAATGGGGACATCTTAAGGAGCTACATGCTGCAATCAAGTCATGTTCACAACCTCTACTTGATGGAACTCAAACCACCTTCAGCTTAGGCTCACAGCAACAAGCTTATGTTTTCAGAAGTTCCACAGAATGTGCTGCCTTCTTGGAAAATAGTGGACCTAGGGATGTAACACCAATTTCAAAATATTTCGTGAGTATACAGAATAATGCCAGAGCAATGAAACCACAATTAAAGTTCAATTCAGCTGAAAATTGGAAAGTGTATACAGAAGCCATCCCTAATTTTGCCGATACTTCGAAAGAGCAGACACATTATTAG

Protein sequence

>MsG0380016372.01.T03

MFLTVGSAHGSRNNTQVTMEKNVNLINGMNNISILSATVGLPNSGAFLETKVAGLSKVEVQGRDFSNYSWGYQVIISA*

>MsG0380016372.01.T02

MKVGLLGEKLQIYSVSGSSKVQWKSFQSSTKPLTWYQTTFDAPAGNDPVVLNLGSMGKGLAWLMAKVLDDIGYHIPRSFLKSTGNLLVILEEETGNPLGITLDTVYIKN*

>MsG0380016372.01.T01

MVVIFDLLLQYEFSGRFDLVGFIKEIQAQGLYVTLRIGPYIESECTYGGLPLWLHDVPGIVFRSDNDQFKFHMQRFTTKIVNMMKSANLFASQGGPIILSQIENEYGSIQSKFQENGLPYSLGCHQWPWDFKPINACNGMQCGRNFKGPNLPNKPSLWTENWTSFLQAFGGAPYLRSASDIAYNVALFIAKKGSYVNYYMYHGGTNFDRLASAFIITAYYDEAPLDEYGLVRQPKWGHLKELHAAIKSCSQPLLDGTQTTFSLGSQQQAYVFRSSTECAAFLENSGPRDVTPISKYFVSIQNNARAMKPQLKFNSAENWKVYTEAIPNFADTSKEQTHY*