Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880041897.01.T01 | XP_003626693.1 | 89.752 | 322 | 13 | 6 | 1 | 313 | 1 | 311 | 0 | 548 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880041897.01.T01 | Q8GXL3 | 43.137 | 357 | 114 | 13 | 1 | 313 | 1 | 312 | 8.23E-71 | 226 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880041897.01.T01 | G7LBJ7 | 89.752 | 322 | 13 | 6 | 1 | 313 | 1 | 311 | 0.0 | 548 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0880041897.01 | MsG0880045735.01 | 0.822180 | 2.718842e-53 | 2.258857e-50 |
| MsG0880041897.01 | MsG0880046421.01 | 0.847404 | 1.181667e-59 | 2.098047e-56 |
| MsG0380014221.01 | MsG0880041897.01 | 0.800446 | 1.435693e-48 | 6.686331e-46 |
| MsG0680031263.01 | MsG0880041897.01 | 0.806259 | 8.970865e-50 | 4.847266e-47 |
| MsG0680031264.01 | MsG0880041897.01 | 0.822254 | 2.614348e-53 | 2.176705e-50 |
| MsG0680031621.01 | MsG0880041897.01 | 0.853174 | 2.845501e-61 | 6.093427e-58 |
| MsG0680031702.01 | MsG0880041897.01 | 0.807046 | 6.119123e-50 | 3.373689e-47 |
| MsG0480023138.01 | MsG0880041897.01 | 0.820273 | 7.483749e-53 | 5.894490e-50 |
| MsG0580024952.01 | MsG0880041897.01 | 0.850616 | 1.513253e-60 | 2.981463e-57 |
| MsG0580025053.01 | MsG0880041897.01 | 0.830159 | 3.435703e-55 | 3.590766e-52 |
| MsG0380017087.01 | MsG0880041897.01 | 0.801209 | 1.003002e-48 | 4.762438e-46 |
| MsG0380017893.01 | MsG0880041897.01 | 0.862809 | 3.896090e-64 | 1.156094e-60 |
| MsG0580028407.01 | MsG0880041897.01 | 0.810505 | 1.114801e-50 | 6.731853e-48 |
| MsG0780039940.01 | MsG0880041897.01 | 0.812841 | 3.460921e-51 | 2.223809e-48 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880041897.01.T01 | MTR_8g005960 | 89.752 | 322 | 13 | 6 | 1 | 313 | 1 | 311 | 0.0 | 548 |
| MsG0880041897.01.T01 | MTR_2g078770 | 59.091 | 88 | 29 | 1 | 183 | 263 | 45 | 132 | 2.20e-27 | 105 |
| MsG0880041897.01.T01 | MTR_8g463140 | 62.222 | 90 | 26 | 2 | 194 | 276 | 63 | 151 | 6.82e-27 | 104 |
| MsG0880041897.01.T01 | MTR_1g086250 | 43.919 | 148 | 63 | 4 | 123 | 263 | 87 | 221 | 9.17e-27 | 111 |
| MsG0880041897.01.T01 | MTR_2g046550 | 46.774 | 124 | 53 | 3 | 156 | 272 | 104 | 221 | 1.58e-26 | 110 |
| MsG0880041897.01.T01 | MTR_4g088555 | 64.286 | 84 | 22 | 2 | 188 | 263 | 54 | 137 | 1.76e-26 | 102 |
| MsG0880041897.01.T01 | MTR_7g444860 | 59.524 | 84 | 27 | 1 | 189 | 265 | 142 | 225 | 7.99e-26 | 105 |
| MsG0880041897.01.T01 | MTR_1g053715 | 45.312 | 128 | 50 | 2 | 157 | 264 | 22 | 149 | 1.35e-25 | 105 |
| MsG0880041897.01.T01 | MTR_3g085180 | 48.780 | 123 | 49 | 3 | 156 | 264 | 118 | 240 | 3.17e-25 | 105 |
| MsG0880041897.01.T01 | MTR_7g110320 | 50.000 | 118 | 44 | 3 | 153 | 263 | 110 | 219 | 5.21e-25 | 106 |
| MsG0880041897.01.T01 | MTR_7g092930 | 59.524 | 84 | 27 | 1 | 186 | 262 | 58 | 141 | 6.54e-25 | 103 |
| MsG0880041897.01.T01 | MTR_4g109770 | 61.728 | 81 | 24 | 1 | 191 | 264 | 118 | 198 | 6.61e-25 | 105 |
| MsG0880041897.01.T01 | MTR_2g461920 | 63.158 | 76 | 21 | 1 | 196 | 264 | 171 | 246 | 6.86e-25 | 105 |
| MsG0880041897.01.T01 | MTR_7g110320 | 50.000 | 118 | 44 | 3 | 153 | 263 | 110 | 219 | 7.71e-25 | 105 |
| MsG0880041897.01.T01 | MTR_1g035010 | 49.167 | 120 | 43 | 2 | 152 | 264 | 71 | 179 | 1.27e-24 | 105 |
| MsG0880041897.01.T01 | MTR_5g046670 | 54.167 | 96 | 33 | 2 | 176 | 264 | 228 | 319 | 1.47e-24 | 104 |
| MsG0880041897.01.T01 | MTR_2g014200 | 59.036 | 83 | 27 | 1 | 188 | 263 | 56 | 138 | 2.06e-24 | 97.1 |
| MsG0880041897.01.T01 | MTR_8g096780 | 49.558 | 113 | 46 | 2 | 159 | 264 | 66 | 174 | 3.11e-23 | 99.4 |
| MsG0880041897.01.T01 | MTR_3g099080 | 59.211 | 76 | 24 | 1 | 196 | 264 | 98 | 173 | 9.13e-22 | 95.1 |
| MsG0880041897.01.T01 | MTR_7g028740 | 54.217 | 83 | 31 | 1 | 191 | 266 | 72 | 154 | 3.21e-21 | 93.2 |
| MsG0880041897.01.T01 | MTR_8g080690 | 56.410 | 78 | 27 | 1 | 194 | 264 | 149 | 226 | 1.36e-20 | 91.7 |
| MsG0880041897.01.T01 | MTR_8g080670 | 44.248 | 113 | 51 | 3 | 156 | 261 | 127 | 234 | 2.66e-19 | 88.2 |
| MsG0880041897.01.T01 | MTR_8g080680 | 40.164 | 122 | 53 | 3 | 160 | 262 | 85 | 205 | 2.50e-17 | 82.4 |
| MsG0880041897.01.T01 | MTR_2g020620 | 53.125 | 64 | 23 | 1 | 206 | 262 | 100 | 163 | 1.15e-12 | 69.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880041897.01.T01 | AT1G02065 | 43.137 | 357 | 114 | 13 | 1 | 313 | 1 | 312 | 8.39e-72 | 226 |
| MsG0880041897.01.T01 | AT1G02065 | 42.642 | 265 | 86 | 8 | 1 | 236 | 1 | 228 | 7.28e-53 | 174 |
| MsG0880041897.01.T01 | AT1G20980 | 51.695 | 118 | 49 | 2 | 156 | 266 | 81 | 197 | 6.85e-26 | 108 |
| MsG0880041897.01.T01 | AT1G69170 | 48.031 | 127 | 52 | 4 | 143 | 262 | 78 | 197 | 7.99e-26 | 107 |
| MsG0880041897.01.T01 | AT1G27370 | 42.763 | 152 | 59 | 4 | 136 | 264 | 105 | 251 | 1.32e-25 | 105 |
| MsG0880041897.01.T01 | AT1G27370 | 42.763 | 152 | 59 | 4 | 136 | 264 | 105 | 251 | 1.85e-25 | 105 |
| MsG0880041897.01.T01 | AT1G27370 | 42.763 | 152 | 59 | 4 | 136 | 264 | 105 | 251 | 1.85e-25 | 105 |
| MsG0880041897.01.T01 | AT1G27370 | 42.763 | 152 | 59 | 4 | 136 | 264 | 105 | 251 | 1.85e-25 | 105 |
| MsG0880041897.01.T01 | AT1G27370 | 42.763 | 152 | 59 | 4 | 136 | 264 | 105 | 251 | 1.85e-25 | 105 |
| MsG0880041897.01.T01 | AT1G27370 | 42.763 | 152 | 59 | 4 | 136 | 264 | 105 | 251 | 1.85e-25 | 105 |
| MsG0880041897.01.T01 | AT1G27370 | 42.763 | 152 | 59 | 4 | 136 | 264 | 105 | 251 | 1.85e-25 | 105 |
| MsG0880041897.01.T01 | AT2G47070 | 64.000 | 75 | 20 | 1 | 196 | 263 | 106 | 180 | 4.24e-25 | 106 |
| MsG0880041897.01.T01 | AT3G60030 | 48.760 | 121 | 44 | 4 | 155 | 268 | 96 | 205 | 5.02e-25 | 106 |
| MsG0880041897.01.T01 | AT1G76580 | 62.500 | 80 | 23 | 1 | 192 | 264 | 110 | 189 | 5.82e-25 | 105 |
| MsG0880041897.01.T01 | AT1G76580 | 62.500 | 80 | 23 | 1 | 192 | 264 | 110 | 189 | 6.42e-25 | 105 |
| MsG0880041897.01.T01 | AT1G76580 | 62.500 | 80 | 23 | 1 | 192 | 264 | 110 | 189 | 7.33e-25 | 105 |
| MsG0880041897.01.T01 | AT2G33810 | 58.537 | 82 | 27 | 1 | 189 | 263 | 47 | 128 | 3.22e-24 | 96.3 |
| MsG0880041897.01.T01 | AT5G43270 | 47.656 | 128 | 43 | 4 | 156 | 262 | 118 | 242 | 4.22e-24 | 102 |
| MsG0880041897.01.T01 | AT5G43270 | 47.656 | 128 | 43 | 4 | 156 | 262 | 118 | 242 | 4.22e-24 | 102 |
| MsG0880041897.01.T01 | AT5G43270 | 47.656 | 128 | 43 | 4 | 156 | 262 | 118 | 242 | 4.22e-24 | 102 |
| MsG0880041897.01.T01 | AT1G53160 | 53.535 | 99 | 35 | 3 | 181 | 268 | 35 | 133 | 1.80e-23 | 95.5 |
| MsG0880041897.01.T01 | AT3G57920 | 50.000 | 114 | 44 | 3 | 158 | 264 | 27 | 134 | 2.08e-23 | 99.4 |
| MsG0880041897.01.T01 | AT1G53160 | 55.319 | 94 | 31 | 3 | 186 | 268 | 40 | 133 | 2.67e-23 | 95.1 |
| MsG0880041897.01.T01 | AT1G53160 | 55.319 | 94 | 31 | 3 | 186 | 268 | 40 | 133 | 2.67e-23 | 95.1 |
| MsG0880041897.01.T01 | AT1G27360 | 41.096 | 146 | 69 | 3 | 136 | 264 | 105 | 250 | 9.05e-23 | 98.2 |
| MsG0880041897.01.T01 | AT1G27360 | 41.096 | 146 | 69 | 3 | 136 | 264 | 105 | 250 | 9.05e-23 | 98.2 |
| MsG0880041897.01.T01 | AT1G27360 | 41.096 | 146 | 69 | 3 | 136 | 264 | 105 | 250 | 9.05e-23 | 98.2 |
| MsG0880041897.01.T01 | AT1G27360 | 41.096 | 146 | 69 | 3 | 136 | 264 | 105 | 250 | 9.05e-23 | 98.2 |
| MsG0880041897.01.T01 | AT5G50670 | 52.381 | 84 | 33 | 1 | 188 | 264 | 93 | 176 | 1.84e-21 | 94.0 |
| MsG0880041897.01.T01 | AT5G50670 | 52.381 | 84 | 33 | 1 | 188 | 264 | 93 | 176 | 1.84e-21 | 94.0 |
| MsG0880041897.01.T01 | AT5G50570 | 52.381 | 84 | 33 | 1 | 188 | 264 | 93 | 176 | 1.84e-21 | 94.0 |
| MsG0880041897.01.T01 | AT5G50570 | 52.381 | 84 | 33 | 1 | 188 | 264 | 93 | 176 | 1.84e-21 | 94.0 |
| MsG0880041897.01.T01 | AT2G42200 | 57.692 | 78 | 26 | 1 | 194 | 264 | 72 | 149 | 3.15e-21 | 93.6 |
| MsG0880041897.01.T01 | AT3G15270 | 53.333 | 75 | 28 | 1 | 196 | 263 | 63 | 137 | 2.87e-20 | 87.0 |
| MsG0880041897.01.T01 | AT5G18830 | 42.105 | 95 | 48 | 1 | 175 | 262 | 117 | 211 | 6.89e-16 | 79.0 |
| MsG0880041897.01.T01 | AT5G18830 | 42.105 | 95 | 48 | 1 | 175 | 262 | 117 | 211 | 8.02e-16 | 79.0 |
| MsG0880041897.01.T01 | AT5G18830 | 42.105 | 95 | 48 | 1 | 175 | 262 | 117 | 211 | 8.23e-16 | 79.0 |
| MsG0880041897.01.T01 | AT2G47070 | 58.824 | 51 | 14 | 1 | 220 | 263 | 1 | 51 | 8.75e-11 | 63.5 |
Find 135 sgRNAs with CRISPR-Local
Find 191 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGTGAATATCTTGAGTATT+TGG | 0.246735 | 8:-864811 | None:intergenic |
| CTGTTAACATCCTCGGATTT+TGG | 0.256271 | 8:-863702 | None:intergenic |
| CTTGAAGTTGTTGAAGGGCT+TGG | 0.266098 | 8:-865116 | None:intergenic |
| GGAGTTGTTGTCTTCATTTC+CGG | 0.269715 | 8:-863328 | None:intergenic |
| CTCTCCCTTGACCCTCTTCC+TGG | 0.270502 | 8:+863642 | MsG0880041897.01.T01:CDS |
| TACCTTAACGGACCTGGTTC+TGG | 0.277856 | 8:+863429 | MsG0880041897.01.T01:CDS |
| CTTCTATCTGAGTTTGATAA+TGG | 0.278524 | 8:+864727 | MsG0880041897.01.T01:CDS |
| TCTAGAGCCCACGAAGTCTA+TGG | 0.307240 | 8:-863727 | None:intergenic |
| GCTGGGCCTGTTGGCTAAAC+TGG | 0.307370 | 8:-863518 | None:intergenic |
| CCGGTAAGCATGATGTTTGT+TGG | 0.322804 | 8:-863309 | None:intergenic |
| GCAGCCACCGTCGTTGCAGC+TGG | 0.327647 | 8:+863954 | MsG0880041897.01.T01:CDS |
| TTCGAACTCGCCTCGGTGTC+AGG | 0.329019 | 8:+863854 | MsG0880041897.01.T01:CDS |
| TTGAAGTTGTTGAAGGGCTT+GGG | 0.330690 | 8:-865115 | None:intergenic |
| TTCCATGGTGGGTCATCAAC+TGG | 0.347461 | 8:+863579 | MsG0880041897.01.T01:CDS |
| CCAACAAACATCATGCTTAC+CGG | 0.358315 | 8:+863309 | MsG0880041897.01.T01:CDS |
| TGTGAATATCTTGAGTATTT+GGG | 0.361532 | 8:-864810 | None:intergenic |
| TTGTTGAAGGGCTTGGGCTT+TGG | 0.370317 | 8:-865109 | None:intergenic |
| ATCTTGAGTATTTGGGTGCT+GGG | 0.372377 | 8:-864803 | None:intergenic |
| GAAGGATCCCCGCCAGAGTC+TGG | 0.374246 | 8:+865020 | MsG0880041897.01.T01:intron |
| TATCTTGAGTATTTGGGTGC+TGG | 0.377786 | 8:-864804 | None:intergenic |
| GGCTAAACTGGTTGTGGTGG+TGG | 0.378995 | 8:-863506 | None:intergenic |
| TCGGTCTAGACCACCTGAAC+CGG | 0.380874 | 8:+863818 | MsG0880041897.01.T01:CDS |
| GGAGGTTGTGGTTGAGGTGG+AGG | 0.381025 | 8:-863612 | None:intergenic |
| GAACCTGTCGAACCCGGTTC+AGG | 0.386932 | 8:-863831 | None:intergenic |
| ATGGAAGGAGGTTGTGGTTG+AGG | 0.388721 | 8:-863618 | None:intergenic |
| TTATCCGACAACTACCTTAA+CGG | 0.399307 | 8:+863417 | MsG0880041897.01.T01:CDS |
| AATTTGACGGTGGGCTTGAT+CGG | 0.400326 | 8:-863367 | None:intergenic |
| ACTGGTTGTGGTGGTGGTGG+TGG | 0.404162 | 8:-863500 | None:intergenic |
| CGGTAAGCATGATGTTTGTT+GGG | 0.413507 | 8:-863308 | None:intergenic |
| TGCAACGACGGTGGCTGCCT+TGG | 0.421484 | 8:-863949 | None:intergenic |
| CGAAGAAGGACTGATGGATA+TGG | 0.430604 | 8:-863545 | None:intergenic |
| GAGAGCATGGAAGGAGGTTG+TGG | 0.432257 | 8:-863624 | None:intergenic |
| TCACAAATCTCACAATACTT+TGG | 0.434049 | 8:+864828 | MsG0880041897.01.T01:CDS |
| TAAACTGGTTGTGGTGGTGG+TGG | 0.440642 | 8:-863503 | None:intergenic |
| CAAAATCCGAGGATGTTAAC+AGG | 0.446882 | 8:+863703 | MsG0880041897.01.T01:CDS |
| ACTGATGGATATGGTGCTGC+TGG | 0.447816 | 8:-863536 | None:intergenic |
| TTCGACCCACGGGCTTTCCA+TGG | 0.449008 | 8:+863564 | MsG0880041897.01.T01:CDS |
| ATTGAGCTTGAAGTTGTTGA+AGG | 0.454327 | 8:-865122 | None:intergenic |
| GACAGTGGCGGTTTCTCCAC+CGG | 0.454790 | 8:+865064 | MsG0880041897.01.T01:CDS |
| CTTGACCCTCTTCCTGGTCA+TGG | 0.462725 | 8:+863648 | MsG0880041897.01.T01:CDS |
| GTCCAGAACCAGGTCCGTTA+AGG | 0.463925 | 8:-863431 | None:intergenic |
| GAGACATGTTGGACTATGAA+TGG | 0.466941 | 8:+863280 | None:intergenic |
| CCACAACCAGTTTAGCCAAC+AGG | 0.466999 | 8:+863512 | MsG0880041897.01.T01:CDS |
| TATGGTGCTGCTGGGCCTGT+TGG | 0.478607 | 8:-863527 | None:intergenic |
| CATGGACATGGACATGGCCC+TGG | 0.481738 | 8:+863666 | MsG0880041897.01.T01:CDS |
| TTTGGTACGAGGAGGAATCC+AGG | 0.482460 | 8:-863684 | None:intergenic |
| GACTTCGTGGGCTCTAGACT+TGG | 0.484947 | 8:+863732 | MsG0880041897.01.T01:CDS |
| CCACCTGAACCGGGTTCGAC+AGG | 0.485330 | 8:+863828 | MsG0880041897.01.T01:CDS |
| ATCGGAGGCTGCTGCTGCGG+CGG | 0.485623 | 8:-863349 | None:intergenic |
| TTGCAATGCTGATCTATCTC+AGG | 0.487614 | 8:+863884 | MsG0880041897.01.T01:CDS |
| AGACATGTTGGACTATGAAT+GGG | 0.488109 | 8:+863281 | None:intergenic |
| TATCAAACTCAGATAGAAGA+TGG | 0.491198 | 8:-864723 | None:intergenic |
| GGGTCAAGGGAGAGCATGGA+AGG | 0.493307 | 8:-863633 | None:intergenic |
| ATTGAGTTCCAGACTCTGGC+GGG | 0.495092 | 8:-865028 | None:intergenic |
| TAGATCAGCATTGCAACCTT+CGG | 0.495851 | 8:-863877 | None:intergenic |
| CCTCTTCCTGGTCATGGACA+TGG | 0.496987 | 8:+863654 | MsG0880041897.01.T01:CDS |
| ACCCACGGGCTTTCCATGGT+GGG | 0.498666 | 8:+863568 | MsG0880041897.01.T01:CDS |
| GCGGCTCACGAAGTCGTCTT+CGG | 0.499397 | 8:-863787 | None:intergenic |
| ATCAGTCCTTCTTCGACCCA+CGG | 0.500041 | 8:+863553 | MsG0880041897.01.T01:CDS |
| CCTGGTCATGGACATGGACA+TGG | 0.500096 | 8:+863660 | MsG0880041897.01.T01:CDS |
| CACAAACTTTGTGGCGGCGG+TGG | 0.502474 | 8:-863917 | None:intergenic |
| CCTGTTGGCTAAACTGGTTG+TGG | 0.506457 | 8:-863512 | None:intergenic |
| AAGAGGGTCAAGGGAGAGCA+TGG | 0.508675 | 8:-863637 | None:intergenic |
| GAAAGCCCGTGGGTCGAAGA+AGG | 0.515436 | 8:-863559 | None:intergenic |
| GAAGGAGGTTGTGGTTGAGG+TGG | 0.517345 | 8:-863615 | None:intergenic |
| TCAGTCCTTCTTCGACCCAC+GGG | 0.517839 | 8:+863554 | MsG0880041897.01.T01:CDS |
| GACCCACGGGCTTTCCATGG+TGG | 0.520528 | 8:+863567 | MsG0880041897.01.T01:CDS |
| GTGGTCTAGACCGACGGTAA+AGG | 0.522892 | 8:-863809 | None:intergenic |
| AGTGAAACTCACAAACTTTG+TGG | 0.531020 | 8:-863926 | None:intergenic |
| TCTAGACTTGGACTCAACCT+TGG | 0.532282 | 8:+863744 | MsG0880041897.01.T01:CDS |
| ACGTAGCTGCAGGAAGAGAT+TGG | 0.533276 | 8:+864753 | MsG0880041897.01.T01:CDS |
| CAGGTTCTTCGAACTCGCCT+CGG | 0.534022 | 8:+863847 | MsG0880041897.01.T01:CDS |
| TCGATGGTGGGTCCAGAACC+AGG | 0.538732 | 8:-863441 | None:intergenic |
| AGGTCCGTTAAGGTAGTTGT+CGG | 0.538800 | 8:-863421 | None:intergenic |
| ATCACCACTGTTTATGTCGA+TGG | 0.538976 | 8:-863457 | None:intergenic |
| ATCTACATCGTCGGTGACAG+TGG | 0.539420 | 8:+865049 | MsG0880041897.01.T01:CDS |
| GACCTTTGTCGAAAATAATC+CGG | 0.539450 | 8:-865083 | None:intergenic |
| TTGATCGGAGGCTGCTGCTG+CGG | 0.542405 | 8:-863352 | None:intergenic |
| TAACAGGCCCATAGACTTCG+TGG | 0.543723 | 8:+863719 | MsG0880041897.01.T01:CDS |
| CTAGAGCCCACGAAGTCTAT+GGG | 0.544298 | 8:-863726 | None:intergenic |
| TATGGGCCTGTTAACATCCT+CGG | 0.547316 | 8:-863709 | None:intergenic |
| CCATGTCCATGTCCATGACC+AGG | 0.547483 | 8:-863660 | None:intergenic |
| AGTCAACCCAGCTGCAACGA+CGG | 0.547853 | 8:-863961 | None:intergenic |
| CAGCCACCGTCGTTGCAGCT+GGG | 0.549496 | 8:+863955 | MsG0880041897.01.T01:CDS |
| CCATGTCCATGACCAGGAAG+AGG | 0.550701 | 8:-863654 | None:intergenic |
| ATAATGGAAAACGTAGCTGC+AGG | 0.553645 | 8:+864743 | MsG0880041897.01.T01:CDS |
| CTGATGGATATGGTGCTGCT+GGG | 0.553703 | 8:-863535 | None:intergenic |
| TTGAGCTTGAAGTTGTTGAA+GGG | 0.561199 | 8:-865121 | None:intergenic |
| ACTCACAAACTTTGTGGCGG+CGG | 0.568304 | 8:-863920 | None:intergenic |
| GTGGTCGAAAATTTGACGGT+GGG | 0.570524 | 8:-863376 | None:intergenic |
| CGTAGTGGTCGAAAATTTGA+CGG | 0.570580 | 8:-863380 | None:intergenic |
| CATGACCAGGAAGAGGGTCA+AGG | 0.572330 | 8:-863647 | None:intergenic |
| TCGCCTCGGTGTCAGGCCGA+AGG | 0.572523 | 8:+863861 | MsG0880041897.01.T01:CDS |
| TCGTGAGCCGCCTTTACCGT+CGG | 0.573246 | 8:+863799 | MsG0880041897.01.T01:CDS |
| GTAGATTGAGTTCCAGACTC+TGG | 0.579544 | 8:-865032 | None:intergenic |
| GAGGTTGTGGTTGAGGTGGA+GGG | 0.580574 | 8:-863611 | None:intergenic |
| ATGACCAGGAAGAGGGTCAA+GGG | 0.581128 | 8:-863646 | None:intergenic |
| TTCGAAGAACCTGTCGAACC+CGG | 0.581830 | 8:-863837 | None:intergenic |
| ACCACTGTTTATGTCGATGG+TGG | 0.584036 | 8:-863454 | None:intergenic |
| GTGGGTCGAAGAAGGACTGA+TGG | 0.584810 | 8:-863551 | None:intergenic |
| GACAACTACCTTAACGGACC+TGG | 0.585890 | 8:+863423 | MsG0880041897.01.T01:CDS |
| GTTGGCTAAACTGGTTGTGG+TGG | 0.586100 | 8:-863509 | None:intergenic |
| CCTGTCGAACCCGGTTCAGG+TGG | 0.588152 | 8:-863828 | None:intergenic |
| TGGCTGATCATAATCGTCGC+AGG | 0.588393 | 8:+864773 | MsG0880041897.01.T01:CDS |
| CGGTCTAGACCACCTGAACC+GGG | 0.589283 | 8:+863819 | MsG0880041897.01.T01:CDS |
| AGAAGTATGTGCGGCCACCA+AGG | 0.589908 | 8:-863761 | None:intergenic |
| GACCCACCATGGAAAGCCCG+TGG | 0.597023 | 8:-863570 | None:intergenic |
| CCACTGTTTATGTCGATGGT+GGG | 0.597970 | 8:-863453 | None:intergenic |
| AGACTTGGACTCAACCTTGG+TGG | 0.599617 | 8:+863747 | MsG0880041897.01.T01:CDS |
| TTGACGGTGGGCTTGATCGG+AGG | 0.603910 | 8:-863364 | None:intergenic |
| TTGCAGCTGGGTTGACTCAG+CGG | 0.610713 | 8:+863967 | MsG0880041897.01.T01:CDS |
| TCAAGGGAGAGCATGGAAGG+AGG | 0.612363 | 8:-863630 | None:intergenic |
| TTGGTACGAGGAGGAATCCA+GGG | 0.615728 | 8:-863683 | None:intergenic |
| GTCTAGACCGACGGTAAAGG+CGG | 0.615862 | 8:-863806 | None:intergenic |
| AGTTTGTGAGTTTCACTCCA+AGG | 0.619014 | 8:+863932 | MsG0880041897.01.T01:CDS |
| TACATCGTCGGTGACAGTGG+CGG | 0.620396 | 8:+865052 | MsG0880041897.01.T01:CDS |
| CATGTCCATGACCAGGAAGA+GGG | 0.620462 | 8:-863653 | None:intergenic |
| GATTGAGTTCCAGACTCTGG+CGG | 0.626944 | 8:-865029 | None:intergenic |
| TGGAACTCAATCTACATCGT+CGG | 0.632089 | 8:+865040 | MsG0880041897.01.T01:CDS |
| AACCAGTTGATGACCCACCA+TGG | 0.633020 | 8:-863581 | None:intergenic |
| CAACCCAGCTGCAACGACGG+TGG | 0.640932 | 8:-863958 | None:intergenic |
| GTTCAGGTGGTCTAGACCGA+CGG | 0.647783 | 8:-863815 | None:intergenic |
| AACAGGCCCATAGACTTCGT+GGG | 0.651739 | 8:+863720 | MsG0880041897.01.T01:CDS |
| GCGTACGTAGGTTCACTACC+CGG | 0.662915 | 8:-865156 | None:intergenic |
| CCTCCTCGTACCAAAATCCG+AGG | 0.665794 | 8:+863692 | MsG0880041897.01.T01:CDS |
| ACCCACCATGGAAAGCCCGT+GGG | 0.668555 | 8:-863569 | None:intergenic |
| AGTGGTCGAAAATTTGACGG+TGG | 0.671593 | 8:-863377 | None:intergenic |
| ACATAGCTTGAGAAGCGTAG+TGG | 0.674169 | 8:-863395 | None:intergenic |
| GACATGTTGGACTATGAATG+GGG | 0.677368 | 8:+863282 | None:intergenic |
| GAAACTCACAAACTTTGTGG+CGG | 0.681714 | 8:-863923 | None:intergenic |
| CTTTGTCGAAAATAATCCGG+TGG | 0.682961 | 8:-865080 | None:intergenic |
| CAACCTTCGGCCTGACACCG+AGG | 0.715496 | 8:-863864 | None:intergenic |
| TTGAGTTCCAGACTCTGGCG+GGG | 0.723001 | 8:-865027 | None:intergenic |
| CTTCGGAAGAGAAGTATGTG+CGG | 0.729099 | 8:-863770 | None:intergenic |
| CCCACCATCGACATAAACAG+TGG | 0.734841 | 8:+863453 | MsG0880041897.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACATAAATAAATATATATGC+AGG | + | Chr8:864698-864717 | MsG0880041897.01.T01:intron | 15.0% |
| !! | ATTCTATTTAACCAAAAATA+AGG | + | Chr8:864944-864963 | MsG0880041897.01.T01:intron | 15.0% |
| !! | TTCTATTTAACCAAAAATAA+GGG | + | Chr8:864945-864964 | MsG0880041897.01.T01:intron | 15.0% |
| !!! | TGATTTGTTTTTTATTTTGA+AGG | + | Chr8:865002-865021 | MsG0880041897.01.T01:intron | 15.0% |
| !! | AAAATACACATCTTAATCAA+AGG | - | Chr8:864249-864268 | None:intergenic | 20.0% |
| !! | TTGATTAAGAAAATTACTTG+TGG | - | Chr8:864863-864882 | None:intergenic | 20.0% |
| !!! | TGAGTTAGGTTTTAATTAAA+CGG | + | Chr8:864188-864207 | MsG0880041897.01.T01:intron | 20.0% |
| !!! | TTGATTAAGATGTGTATTTT+GGG | + | Chr8:864249-864268 | MsG0880041897.01.T01:intron | 20.0% |
| !!! | TTTGATTAAGATGTGTATTT+TGG | + | Chr8:864248-864267 | MsG0880041897.01.T01:intron | 20.0% |
| ! | ACTTATCATAAGCATGATTA+TGG | + | Chr8:864972-864991 | MsG0880041897.01.T01:intron | 25.0% |
| ! | TGTGAATATCTTGAGTATTT+GGG | - | Chr8:864813-864832 | None:intergenic | 25.0% |
| ! | TTGTGAATATCTTGAGTATT+TGG | - | Chr8:864814-864833 | None:intergenic | 25.0% |
| !! | AACTTGTGTTAATTTGAGTT+AGG | + | Chr8:864174-864193 | MsG0880041897.01.T01:intron | 25.0% |
| !! | AGTGAGTAGTATATGTTTTA+AGG | - | Chr8:864451-864470 | None:intergenic | 25.0% |
| !! | TCAATGATTGAGTTGTTAAA+GGG | - | Chr8:864040-864059 | None:intergenic | 25.0% |
| !!! | ATAAGTAACTCCCTTATTTT+TGG | - | Chr8:864958-864977 | None:intergenic | 25.0% |
| !!! | GTGAGTAGTATATGTTTTAA+GGG | - | Chr8:864450-864469 | None:intergenic | 25.0% |
| !!! | TGTTGTTTAATTTGCACTTA+TGG | - | Chr8:864143-864162 | None:intergenic | 25.0% |
| !!! | TTTAATTTGCACTTATGGTA+TGG | - | Chr8:864138-864157 | None:intergenic | 25.0% |
| AAGGTTGGATTCAAAAAAGA+CGG | + | Chr8:864352-864371 | MsG0880041897.01.T01:intron | 30.0% | |
| CTTCTATCTGAGTTTGATAA+TGG | + | Chr8:864727-864746 | MsG0880041897.01.T01:CDS | 30.0% | |
| TATCAAACTCAGATAGAAGA+TGG | - | Chr8:864726-864745 | None:intergenic | 30.0% | |
| TCACAAATCTCACAATACTT+TGG | + | Chr8:864828-864847 | MsG0880041897.01.T01:CDS | 30.0% | |
| ! | CAATGATTGAGTTGTTAAAG+GGG | - | Chr8:864039-864058 | None:intergenic | 30.0% |
| ! | CTCAATGATTGAGTTGTTAA+AGG | - | Chr8:864041-864060 | None:intergenic | 30.0% |
| !! | TACTACTCACTTAGTTTGTT+TGG | + | Chr8:864460-864479 | MsG0880041897.01.T01:intron | 30.0% |
| !!! | GGTTTTAAAAACGTGTATGA+GGG | + | Chr8:864270-864289 | MsG0880041897.01.T01:intron | 30.0% |
| AGTGAAACTCACAAACTTTG+TGG | - | Chr8:863929-863948 | None:intergenic | 35.0% | |
| ATTGAGCTTGAAGTTGTTGA+AGG | - | Chr8:865125-865144 | None:intergenic | 35.0% | |
| ATTTCTGTTCCTCACTTCAA+GGG | + | Chr8:864073-864092 | MsG0880041897.01.T01:intron | 35.0% | |
| GACCTTTGTCGAAAATAATC+CGG | - | Chr8:865086-865105 | None:intergenic | 35.0% | |
| TTATCCGACAACTACCTTAA+CGG | + | Chr8:863417-863436 | MsG0880041897.01.T01:CDS | 35.0% | |
| TTGAGCTTGAAGTTGTTGAA+GGG | - | Chr8:865124-865143 | None:intergenic | 35.0% | |
| ! | TATTTCTGTTCCTCACTTCA+AGG | + | Chr8:864072-864091 | MsG0880041897.01.T01:intron | 35.0% |
| !!! | GCTGTGTTGTTTTGTTTGAA+TGG | - | Chr8:864545-864564 | None:intergenic | 35.0% |
| !!! | GGGTTTTAAAAACGTGTATG+AGG | + | Chr8:864269-864288 | MsG0880041897.01.T01:intron | 35.0% |
| AAAAGACGGAAATACCCTTG+AGG | + | Chr8:864366-864385 | MsG0880041897.01.T01:intron | 40.0% | |
| AAAGACGGAAATACCCTTGA+GGG | + | Chr8:864367-864386 | MsG0880041897.01.T01:intron | 40.0% | |
| AGTAAGCAAGCACAAAACAG+CGG | + | Chr8:864311-864330 | MsG0880041897.01.T01:intron | 40.0% | |
| AGTTTGTGAGTTTCACTCCA+AGG | + | Chr8:863932-863951 | MsG0880041897.01.T01:CDS | 40.0% | |
| ATCACCACTGTTTATGTCGA+TGG | - | Chr8:863460-863479 | None:intergenic | 40.0% | |
| ATCTTGAGTATTTGGGTGCT+GGG | - | Chr8:864806-864825 | None:intergenic | 40.0% | |
| CAAAATCCGAGGATGTTAAC+AGG | + | Chr8:863703-863722 | MsG0880041897.01.T01:CDS | 40.0% | |
| CCAACAAACATCATGCTTAC+CGG | + | Chr8:863309-863328 | MsG0880041897.01.T01:CDS | 40.0% | |
| CGGTAAGCATGATGTTTGTT+GGG | - | Chr8:863311-863330 | None:intergenic | 40.0% | |
| CGTAGTGGTCGAAAATTTGA+CGG | - | Chr8:863383-863402 | None:intergenic | 40.0% | |
| CTTTGTCGAAAATAATCCGG+TGG | - | Chr8:865083-865102 | None:intergenic | 40.0% | |
| GAAACTCACAAACTTTGTGG+CGG | - | Chr8:863926-863945 | None:intergenic | 40.0% | |
| GGAGTTGTTGTCTTCATTTC+CGG | - | Chr8:863331-863350 | None:intergenic | 40.0% | |
| TAGATCAGCATTGCAACCTT+CGG | - | Chr8:863880-863899 | None:intergenic | 40.0% | |
| TATCTTGAGTATTTGGGTGC+TGG | - | Chr8:864807-864826 | None:intergenic | 40.0% | |
| TGGAACTCAATCTACATCGT+CGG | + | Chr8:865040-865059 | MsG0880041897.01.T01:CDS | 40.0% | |
| TTGAAGTTGTTGAAGGGCTT+GGG | - | Chr8:865118-865137 | None:intergenic | 40.0% | |
| TTGCAATGCTGATCTATCTC+AGG | + | Chr8:863884-863903 | MsG0880041897.01.T01:CDS | 40.0% | |
| ! | AGCTCAATGTTTTTCTCCAC+CGG | + | Chr8:865137-865156 | MsG0880041897.01.T01:CDS | 40.0% |
| ! | ATAATGGAAAACGTAGCTGC+AGG | + | Chr8:864743-864762 | MsG0880041897.01.T01:CDS | 40.0% |
| ! | CACCGGATTATTTTCGACAA+AGG | + | Chr8:865081-865100 | MsG0880041897.01.T01:CDS | 40.0% |
| ! | CTGTTAACATCCTCGGATTT+TGG | - | Chr8:863705-863724 | None:intergenic | 40.0% |
| !! | ATGATTGAGTTGACCGTACA+TGG | + | Chr8:864401-864420 | MsG0880041897.01.T01:intron | 40.0% |
| !! | TGATTGAGTTGACCGTACAT+GGG | + | Chr8:864402-864421 | MsG0880041897.01.T01:intron | 40.0% |
| AAGACGGAAATACCCTTGAG+GGG | + | Chr8:864368-864387 | MsG0880041897.01.T01:intron | 45.0% | |
| AAGCACAAAACAGCGGTGTT+GGG | + | Chr8:864318-864337 | MsG0880041897.01.T01:intron | 45.0% | |
| ACCACTGTTTATGTCGATGG+TGG | - | Chr8:863457-863476 | None:intergenic | 45.0% | |
| ACGAAAATGCCCTTGAAGTG+AGG | - | Chr8:864085-864104 | None:intergenic | 45.0% | |
| AGGTCCGTTAAGGTAGTTGT+CGG | - | Chr8:863424-863443 | None:intergenic | 45.0% | |
| AGTGGTCGAAAATTTGACGG+TGG | - | Chr8:863380-863399 | None:intergenic | 45.0% | |
| ATTGTCAACTCTCCCCTCAA+GGG | - | Chr8:864383-864402 | None:intergenic | 45.0% | |
| CCACTGTTTATGTCGATGGT+GGG | - | Chr8:863456-863475 | None:intergenic | 45.0% | |
| CCGGTAAGCATGATGTTTGT+TGG | - | Chr8:863312-863331 | None:intergenic | 45.0% | |
| CTTGAAGTTGTTGAAGGGCT+TGG | - | Chr8:865119-865138 | None:intergenic | 45.0% | |
| GTAGATTGAGTTCCAGACTC+TGG | - | Chr8:865035-865054 | None:intergenic | 45.0% | |
| GTGGTCGAAAATTTGACGGT+GGG | - | Chr8:863379-863398 | None:intergenic | 45.0% | |
| TATGGGCCTGTTAACATCCT+CGG | - | Chr8:863712-863731 | None:intergenic | 45.0% | |
| TCTAGACTTGGACTCAACCT+TGG | + | Chr8:863744-863763 | MsG0880041897.01.T01:CDS | 45.0% | |
| TTAAGGGACACAAATGCCCT+CGG | - | Chr8:864434-864453 | None:intergenic | 45.0% | |
| ! | AATTTGACGGTGGGCTTGAT+CGG | - | Chr8:863370-863389 | None:intergenic | 45.0% |
| ! | ACATAGCTTGAGAAGCGTAG+TGG | - | Chr8:863398-863417 | None:intergenic | 45.0% |
| ! | CGAAGAAGGACTGATGGATA+TGG | - | Chr8:863548-863567 | None:intergenic | 45.0% |
| ! | CTTCGGAAGAGAAGTATGTG+CGG | - | Chr8:863773-863792 | None:intergenic | 45.0% |
| ! | GCTCAATGTTTTTCTCCACC+GGG | + | Chr8:865138-865157 | MsG0880041897.01.T01:CDS | 45.0% |
| !! | GATTGAGTTGACCGTACATG+GGG | + | Chr8:864403-864422 | MsG0880041897.01.T01:intron | 45.0% |
| !! | TAATAATAATAATAATATAG+TGG | - | Chr8:864617-864636 | None:intergenic | 5.0% |
| !!! | TTTTTTTTTTTTTATCAAAA+AGG | + | Chr8:864222-864241 | MsG0880041897.01.T01:intron | 5.0% |
| AACAGGCCCATAGACTTCGT+GGG | + | Chr8:863720-863739 | MsG0880041897.01.T01:CDS | 50.0% | |
| ACGTAGCTGCAGGAAGAGAT+TGG | + | Chr8:864753-864772 | MsG0880041897.01.T01:CDS | 50.0% | |
| ACTCACAAACTTTGTGGCGG+CGG | - | Chr8:863923-863942 | None:intergenic | 50.0% | |
| AGACTTGGACTCAACCTTGG+TGG | + | Chr8:863747-863766 | MsG0880041897.01.T01:CDS | 50.0% | |
| ATCACAACCTGCTGCATTGC+TGG | - | Chr8:863998-864017 | None:intergenic | 50.0% | |
| ATCAGTCCTTCTTCGACCCA+CGG | + | Chr8:863553-863572 | MsG0880041897.01.T01:CDS | 50.0% | |
| ATCTACATCGTCGGTGACAG+TGG | + | Chr8:865049-865068 | MsG0880041897.01.T01:CDS | 50.0% | |
| ATGACCAGGAAGAGGGTCAA+GGG | - | Chr8:863649-863668 | None:intergenic | 50.0% | |
| ATGGAAGGAGGTTGTGGTTG+AGG | - | Chr8:863621-863640 | None:intergenic | 50.0% | |
| ATTGAGTTCCAGACTCTGGC+GGG | - | Chr8:865031-865050 | None:intergenic | 50.0% | |
| CAAGCACAAAACAGCGGTGT+TGG | + | Chr8:864317-864336 | MsG0880041897.01.T01:intron | 50.0% | |
| CATGTCCATGACCAGGAAGA+GGG | - | Chr8:863656-863675 | None:intergenic | 50.0% | |
| CATTGTCAACTCTCCCCTCA+AGG | - | Chr8:864384-864403 | None:intergenic | 50.0% | |
| CCACAACCAGTTTAGCCAAC+AGG | + | Chr8:863512-863531 | MsG0880041897.01.T01:CDS | 50.0% | |
| CCCACCATCGACATAAACAG+TGG | + | Chr8:863453-863472 | MsG0880041897.01.T01:CDS | 50.0% | |
| CTAGAGCCCACGAAGTCTAT+GGG | - | Chr8:863729-863748 | None:intergenic | 50.0% | |
| GATTGAGTTCCAGACTCTGG+CGG | - | Chr8:865032-865051 | None:intergenic | 50.0% | |
| GTTGGCTAAACTGGTTGTGG+TGG | - | Chr8:863512-863531 | None:intergenic | 50.0% | |
| TAACAGGCCCATAGACTTCG+TGG | + | Chr8:863719-863738 | MsG0880041897.01.T01:CDS | 50.0% | |
| TAAGGGACACAAATGCCCTC+GGG | - | Chr8:864433-864452 | None:intergenic | 50.0% | |
| TGGCTGATCATAATCGTCGC+AGG | + | Chr8:864773-864792 | MsG0880041897.01.T01:CDS | 50.0% | |
| TTCGAAGAACCTGTCGAACC+CGG | - | Chr8:863840-863859 | None:intergenic | 50.0% | |
| TTGGTACGAGGAGGAATCCA+GGG | - | Chr8:863686-863705 | None:intergenic | 50.0% | |
| TTGTTGAAGGGCTTGGGCTT+TGG | - | Chr8:865112-865131 | None:intergenic | 50.0% | |
| TTTGGTACGAGGAGGAATCC+AGG | - | Chr8:863687-863706 | None:intergenic | 50.0% | |
| ! | AGCACAAAACAGCGGTGTTG+GGG | + | Chr8:864319-864338 | MsG0880041897.01.T01:intron | 50.0% |
| ! | CCTGTTGGCTAAACTGGTTG+TGG | - | Chr8:863515-863534 | None:intergenic | 50.0% |
| ! | GACAACTACCTTAACGGACC+TGG | + | Chr8:863423-863442 | MsG0880041897.01.T01:CDS | 50.0% |
| ! | TACCTTAACGGACCTGGTTC+TGG | + | Chr8:863429-863448 | MsG0880041897.01.T01:CDS | 50.0% |
| ! | TCTAGAGCCCACGAAGTCTA+TGG | - | Chr8:863730-863749 | None:intergenic | 50.0% |
| !! | AACCAGTTGATGACCCACCA+TGG | - | Chr8:863584-863603 | None:intergenic | 50.0% |
| !! | ACTGATGGATATGGTGCTGC+TGG | - | Chr8:863539-863558 | None:intergenic | 50.0% |
| !! | CATCCTCGGATTTTGGTACG+AGG | - | Chr8:863698-863717 | None:intergenic | 50.0% |
| !! | CTGATGGATATGGTGCTGCT+GGG | - | Chr8:863538-863557 | None:intergenic | 50.0% |
| !! | TAAACTGGTTGTGGTGGTGG+TGG | - | Chr8:863506-863525 | None:intergenic | 50.0% |
| !! | TTCCATGGTGGGTCATCAAC+TGG | + | Chr8:863579-863598 | MsG0880041897.01.T01:CDS | 50.0% |
| AAGAGGGTCAAGGGAGAGCA+TGG | - | Chr8:863640-863659 | None:intergenic | 55.0% | |
| AGTCAACCCAGCTGCAACGA+CGG | - | Chr8:863964-863983 | None:intergenic | 55.0% | |
| CAGGTTCTTCGAACTCGCCT+CGG | + | Chr8:863847-863866 | MsG0880041897.01.T01:CDS | 55.0% | |
| CATGACCAGGAAGAGGGTCA+AGG | - | Chr8:863650-863669 | None:intergenic | 55.0% | |
| CCATGTCCATGACCAGGAAG+AGG | - | Chr8:863657-863676 | None:intergenic | 55.0% | |
| CCATGTCCATGTCCATGACC+AGG | - | Chr8:863663-863682 | None:intergenic | 55.0% | |
| CCTCCTCGTACCAAAATCCG+AGG | + | Chr8:863692-863711 | MsG0880041897.01.T01:CDS | 55.0% | |
| CCTCGGGATTTCCCCATGTA+CGG | - | Chr8:864417-864436 | None:intergenic | 55.0% | |
| CCTCTTCCTGGTCATGGACA+TGG | + | Chr8:863654-863673 | MsG0880041897.01.T01:CDS | 55.0% | |
| CCTGGTCATGGACATGGACA+TGG | + | Chr8:863660-863679 | MsG0880041897.01.T01:CDS | 55.0% | |
| CGTACATGGGGAAATCCCGA+GGG | + | Chr8:864415-864434 | MsG0880041897.01.T01:intron | 55.0% | |
| CTTGACCCTCTTCCTGGTCA+TGG | + | Chr8:863648-863667 | MsG0880041897.01.T01:CDS | 55.0% | |
| GAAGGAGGTTGTGGTTGAGG+TGG | - | Chr8:863618-863637 | None:intergenic | 55.0% | |
| GAGGTTGTGGTTGAGGTGGA+GGG | - | Chr8:863614-863633 | None:intergenic | 55.0% | |
| GGCTAAACTGGTTGTGGTGG+TGG | - | Chr8:863509-863528 | None:intergenic | 55.0% | |
| GTCCAGAACCAGGTCCGTTA+AGG | - | Chr8:863434-863453 | None:intergenic | 55.0% | |
| GTCTAGACCGACGGTAAAGG+CGG | - | Chr8:863809-863828 | None:intergenic | 55.0% | |
| GTGGGTCGAAGAAGGACTGA+TGG | - | Chr8:863554-863573 | None:intergenic | 55.0% | |
| GTGGTCTAGACCGACGGTAA+AGG | - | Chr8:863812-863831 | None:intergenic | 55.0% | |
| GTTCAGGTGGTCTAGACCGA+CGG | - | Chr8:863818-863837 | None:intergenic | 55.0% | |
| TACATCGTCGGTGACAGTGG+CGG | + | Chr8:865052-865071 | MsG0880041897.01.T01:CDS | 55.0% | |
| TCAGTCCTTCTTCGACCCAC+GGG | + | Chr8:863554-863573 | MsG0880041897.01.T01:CDS | 55.0% | |
| TCGGTCTAGACCACCTGAAC+CGG | + | Chr8:863818-863837 | MsG0880041897.01.T01:CDS | 55.0% | |
| TTGAGTTCCAGACTCTGGCG+GGG | - | Chr8:865030-865049 | None:intergenic | 55.0% | |
| ! | AAACAGCGGTGTTGGGGGAT+AGG | + | Chr8:864325-864344 | MsG0880041897.01.T01:intron | 55.0% |
| ! | AACAGCGGTGTTGGGGGATA+GGG | + | Chr8:864326-864345 | MsG0880041897.01.T01:intron | 55.0% |
| ! | AGAAGTATGTGCGGCCACCA+AGG | - | Chr8:863764-863783 | None:intergenic | 55.0% |
| ! | GAGAGCATGGAAGGAGGTTG+TGG | - | Chr8:863627-863646 | None:intergenic | 55.0% |
| ! | GCACAAAACAGCGGTGTTGG+GGG | + | Chr8:864320-864339 | MsG0880041897.01.T01:intron | 55.0% |
| ! | TCAAGGGAGAGCATGGAAGG+AGG | - | Chr8:863633-863652 | None:intergenic | 55.0% |
| ! | TTGCAGCTGGGTTGACTCAG+CGG | + | Chr8:863967-863986 | MsG0880041897.01.T01:CDS | 55.0% |
| !! | CCTCGGATTTTGGTACGAGG+AGG | - | Chr8:863695-863714 | None:intergenic | 55.0% |
| !! | GACTTCGTGGGCTCTAGACT+TGG | + | Chr8:863732-863751 | MsG0880041897.01.T01:CDS | 55.0% |
| ACCCACCATGGAAAGCCCGT+GGG | - | Chr8:863572-863591 | None:intergenic | 60.0% | |
| ACCCACGGGCTTTCCATGGT+GGG | + | Chr8:863568-863587 | MsG0880041897.01.T01:CDS | 60.0% | |
| CACAAACTTTGTGGCGGCGG+TGG | - | Chr8:863920-863939 | None:intergenic | 60.0% | |
| CATGGACATGGACATGGCCC+TGG | + | Chr8:863666-863685 | MsG0880041897.01.T01:CDS | 60.0% | |
| CCGTACATGGGGAAATCCCG+AGG | + | Chr8:864414-864433 | MsG0880041897.01.T01:intron | 60.0% | |
| CGGTCTAGACCACCTGAACC+GGG | + | Chr8:863819-863838 | MsG0880041897.01.T01:CDS | 60.0% | |
| CTCTCCCTTGACCCTCTTCC+TGG | + | Chr8:863642-863661 | MsG0880041897.01.T01:CDS | 60.0% | |
| GAAAGCCCGTGGGTCGAAGA+AGG | - | Chr8:863562-863581 | None:intergenic | 60.0% | |
| GAACCTGTCGAACCCGGTTC+AGG | - | Chr8:863834-863853 | None:intergenic | 60.0% | |
| GACAGTGGCGGTTTCTCCAC+CGG | + | Chr8:865064-865083 | MsG0880041897.01.T01:CDS | 60.0% | |
| GCGGCTCACGAAGTCGTCTT+CGG | - | Chr8:863790-863809 | None:intergenic | 60.0% | |
| GGAGGTTGTGGTTGAGGTGG+AGG | - | Chr8:863615-863634 | None:intergenic | 60.0% | |
| GGTTCTGCCAGCAATGCAGC+AGG | + | Chr8:863988-864007 | MsG0880041897.01.T01:intron | 60.0% | |
| GTGTTGGGGGATAGGGGAGA+AGG | + | Chr8:864333-864352 | MsG0880041897.01.T01:intron | 60.0% | |
| TCGTGAGCCGCCTTTACCGT+CGG | + | Chr8:863799-863818 | MsG0880041897.01.T01:CDS | 60.0% | |
| TGGGGGATAGGGGAGAAGGT+TGG | + | Chr8:864337-864356 | MsG0880041897.01.T01:intron | 60.0% | |
| TTCGACCCACGGGCTTTCCA+TGG | + | Chr8:863564-863583 | MsG0880041897.01.T01:CDS | 60.0% | |
| TTGATCGGAGGCTGCTGCTG+CGG | - | Chr8:863355-863374 | None:intergenic | 60.0% | |
| ! | ACAGCGGTGTTGGGGGATAG+GGG | + | Chr8:864327-864346 | MsG0880041897.01.T01:intron | 60.0% |
| ! | GCTGGGCCTGTTGGCTAAAC+TGG | - | Chr8:863521-863540 | None:intergenic | 60.0% |
| ! | GGGTCAAGGGAGAGCATGGA+AGG | - | Chr8:863636-863655 | None:intergenic | 60.0% |
| ! | TTGACGGTGGGCTTGATCGG+AGG | - | Chr8:863367-863386 | None:intergenic | 60.0% |
| !! | ACTGGTTGTGGTGGTGGTGG+TGG | - | Chr8:863503-863522 | None:intergenic | 60.0% |
| !! | TATGGTGCTGCTGGGCCTGT+TGG | - | Chr8:863530-863549 | None:intergenic | 60.0% |
| !! | TCGATGGTGGGTCCAGAACC+AGG | - | Chr8:863444-863463 | None:intergenic | 60.0% |
| !! | TTCGAACTCGCCTCGGTGTC+AGG | + | Chr8:863854-863873 | MsG0880041897.01.T01:CDS | 60.0% |
| CAACCCAGCTGCAACGACGG+TGG | - | Chr8:863961-863980 | None:intergenic | 65.0% | |
| CAACCTTCGGCCTGACACCG+AGG | - | Chr8:863867-863886 | None:intergenic | 65.0% | |
| CAGCCACCGTCGTTGCAGCT+GGG | + | Chr8:863955-863974 | MsG0880041897.01.T01:CDS | 65.0% | |
| CCACCTGAACCGGGTTCGAC+AGG | + | Chr8:863828-863847 | MsG0880041897.01.T01:CDS | 65.0% | |
| CCTGTCGAACCCGGTTCAGG+TGG | - | Chr8:863831-863850 | None:intergenic | 65.0% | |
| GAAGGATCCCCGCCAGAGTC+TGG | + | Chr8:865020-865039 | MsG0880041897.01.T01:intron | 65.0% | |
| GACCCACCATGGAAAGCCCG+TGG | - | Chr8:863573-863592 | None:intergenic | 65.0% | |
| GACCCACGGGCTTTCCATGG+TGG | + | Chr8:863567-863586 | MsG0880041897.01.T01:CDS | 65.0% | |
| TGCAACGACGGTGGCTGCCT+TGG | - | Chr8:863952-863971 | None:intergenic | 65.0% | |
| !! | GGTTGTGGTGGTGGTGGTGG+TGG | - | Chr8:863500-863519 | None:intergenic | 65.0% |
| ATCGGAGGCTGCTGCTGCGG+CGG | - | Chr8:863352-863371 | None:intergenic | 70.0% | |
| GCAGCCACCGTCGTTGCAGC+TGG | + | Chr8:863954-863973 | MsG0880041897.01.T01:CDS | 70.0% | |
| !! | TCGCCTCGGTGTCAGGCCGA+AGG | + | Chr8:863861-863880 | MsG0880041897.01.T01:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr8 | gene | 863285 | 865163 | 863285 | ID=MsG0880041897.01;Name=MsG0880041897.01 |
| Chr8 | mRNA | 863285 | 865163 | 863285 | ID=MsG0880041897.01.T01;Parent=MsG0880041897.01;Name=MsG0880041897.01.T01;_AED=0.32;_eAED=0.32;_QI=0|0|0|1|0|0|3|0|329 |
| Chr8 | exon | 863285 | 863988 | 863285 | ID=MsG0880041897.01.T01:exon:119;Parent=MsG0880041897.01.T01 |
| Chr8 | exon | 864720 | 864865 | 864720 | ID=MsG0880041897.01.T01:exon:118;Parent=MsG0880041897.01.T01 |
| Chr8 | exon | 865024 | 865163 | 865024 | ID=MsG0880041897.01.T01:exon:117;Parent=MsG0880041897.01.T01 |
| Chr8 | CDS | 863285 | 863988 | 863285 | ID=MsG0880041897.01.T01:cds;Parent=MsG0880041897.01.T01 |
| Chr8 | CDS | 864720 | 864865 | 864720 | ID=MsG0880041897.01.T01:cds;Parent=MsG0880041897.01.T01 |
| Chr8 | CDS | 865024 | 865163 | 865024 | ID=MsG0880041897.01.T01:cds;Parent=MsG0880041897.01.T01 |
| Gene Sequence |
| Protein sequence |
