Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880045185.01.T01 | XP_003628820.2 | 95.625 | 160 | 5 | 1 | 1 | 160 | 491 | 648 | 1.76E-97 | 304 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880045185.01.T01 | A0A060KY90 | 60.759 | 158 | 49 | 3 | 1 | 158 | 486 | 630 | 2.04E-54 | 184 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880045185.01.T01 | G7LHR2 | 95.625 | 160 | 5 | 1 | 1 | 160 | 491 | 648 | 8.40e-98 | 304 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0180000197.01 | MsG0880045185.01 | 0.887524 | 1.322496e-72 | 9.869099e-69 |
| MsG0180000555.01 | MsG0880045185.01 | 0.804719 | 1.887654e-49 | 9.804144e-47 |
| MsG0180000821.01 | MsG0880045185.01 | 0.829495 | 4.986299e-55 | 5.111766e-52 |
| MsG0180000822.01 | MsG0880045185.01 | 0.817723 | 2.843609e-52 | 2.087197e-49 |
| MsG0180002075.01 | MsG0880045185.01 | 0.807687 | 4.475736e-50 | 2.509055e-47 |
| MsG0880045185.01 | MsG0880045897.01 | -0.823050 | 1.706744e-53 | 1.453617e-50 |
| MsG0880045185.01 | MsG0880045914.01 | 0.861885 | 7.490985e-64 | 2.151608e-60 |
| MsG0880045185.01 | MsG0880046027.01 | 0.812719 | 3.679572e-51 | 2.356973e-48 |
| MsG0880045185.01 | MsG0880046560.01 | 0.836654 | 8.242823e-57 | 1.045402e-53 |
| MsG0880045185.01 | MsG0880046561.01 | 0.819167 | 1.338967e-52 | 1.022596e-49 |
| MsG0880045185.01 | MsG0880047183.01 | 0.803629 | 3.182878e-49 | 1.607312e-46 |
| MsG0880045185.01 | MsG0880047337.01 | 0.803095 | 4.104617e-49 | 2.044486e-46 |
| MsG0880045185.01 | MsG0880047437.01 | 0.841564 | 4.402724e-58 | 6.494949e-55 |
| MsG0180003031.01 | MsG0880045185.01 | 0.806152 | 9.452129e-50 | 5.093084e-47 |
| MsG0180004008.01 | MsG0880045185.01 | 0.805856 | 1.090923e-49 | 5.834115e-47 |
| MsG0180004091.01 | MsG0880045185.01 | 0.807881 | 4.069396e-50 | 2.292805e-47 |
| MsG0180004689.01 | MsG0880045185.01 | 0.839526 | 1.503295e-57 | 2.081500e-54 |
| MsG0180005443.01 | MsG0880045185.01 | 0.818601 | 1.800593e-52 | 1.353830e-49 |
| MsG0180005445.01 | MsG0880045185.01 | 0.803649 | 3.151524e-49 | 1.592294e-46 |
| MsG0180005451.01 | MsG0880045185.01 | 0.801400 | 9.165821e-49 | 4.372971e-46 |
| MsG0180005493.01 | MsG0880045185.01 | 0.849340 | 3.444523e-60 | 6.509933e-57 |
| MsG0180005507.01 | MsG0880045185.01 | 0.821962 | 3.054016e-53 | 2.521648e-50 |
| MsG0780040389.01 | MsG0880045185.01 | 0.804051 | 2.600373e-49 | 1.327529e-46 |
| MsG0780040488.01 | MsG0880045185.01 | 0.801308 | 9.574834e-49 | 4.557605e-46 |
| MsG0780040516.01 | MsG0880045185.01 | 0.828394 | 9.214526e-55 | 9.147350e-52 |
| MsG0780041376.01 | MsG0880045185.01 | 0.809849 | 1.543873e-50 | 9.163840e-48 |
| MsG0780041469.01 | MsG0880045185.01 | 0.802519 | 5.399099e-49 | 2.650099e-46 |
| MsG0780041787.01 | MsG0880045185.01 | 0.806128 | 9.559501e-50 | 5.147883e-47 |
| MsG0880042547.01 | MsG0880045185.01 | 0.811607 | 6.431779e-51 | 3.998994e-48 |
| MsG0880042829.01 | MsG0880045185.01 | 0.805473 | 1.312349e-49 | 6.949274e-47 |
| MsG0880042836.01 | MsG0880045185.01 | 0.806364 | 8.527439e-50 | 4.619608e-47 |
| MsG0880042918.01 | MsG0880045185.01 | 0.812216 | 4.739446e-51 | 2.995604e-48 |
| MsG0880042939.01 | MsG0880045185.01 | 0.840891 | 6.617164e-58 | 9.559503e-55 |
| MsG0880042940.01 | MsG0880045185.01 | 0.814795 | 1.284295e-51 | 8.700880e-49 |
| MsG0880043252.01 | MsG0880045185.01 | 0.801953 | 7.061007e-49 | 3.416205e-46 |
| MsG0880043489.01 | MsG0880045185.01 | 0.836302 | 1.013199e-56 | 1.271859e-53 |
| MsG0880043547.01 | MsG0880045185.01 | 0.816040 | 6.788491e-52 | 4.758294e-49 |
| MsG0280011105.01 | MsG0880045185.01 | 0.867593 | 1.220789e-65 | 4.285812e-62 |
| MsG0280011258.01 | MsG0880045185.01 | 0.812003 | 5.274584e-51 | 3.314444e-48 |
| MsG0380012101.01 | MsG0880045185.01 | 0.810641 | 1.041950e-50 | 6.314928e-48 |
| MsG0380012872.01 | MsG0880045185.01 | 0.809046 | 2.296583e-50 | 1.334332e-47 |
| MsG0380014913.01 | MsG0880045185.01 | 0.809932 | 1.481491e-50 | 8.812858e-48 |
| MsG0680030740.01 | MsG0880045185.01 | 0.808817 | 2.570464e-50 | 1.484347e-47 |
| MsG0680031877.01 | MsG0880045185.01 | 0.800763 | 1.237323e-48 | 5.808895e-46 |
| MsG0680032896.01 | MsG0880045185.01 | 0.808261 | 3.378409e-50 | 1.922821e-47 |
| MsG0680032899.01 | MsG0880045185.01 | 0.813220 | 2.857500e-51 | 1.854912e-48 |
| MsG0680034753.01 | MsG0880045185.01 | 0.801062 | 1.074807e-48 | 5.084707e-46 |
| MsG0680034757.01 | MsG0880045185.01 | 0.809180 | 2.149539e-50 | 1.253420e-47 |
| MsG0680034843.01 | MsG0880045185.01 | 0.807028 | 6.173127e-50 | 3.401913e-47 |
| MsG0680035656.01 | MsG0880045185.01 | 0.801219 | 9.984056e-49 | 4.741737e-46 |
| MsG0480018787.01 | MsG0880045185.01 | 0.809882 | 1.519276e-50 | 9.025478e-48 |
| MsG0480018846.01 | MsG0880045185.01 | 0.844709 | 6.390775e-59 | 1.040571e-55 |
| MsG0480020242.01 | MsG0880045185.01 | 0.863170 | 3.013153e-64 | 9.049370e-61 |
| MsG0480021778.01 | MsG0880045185.01 | 0.804837 | 1.783172e-49 | 9.289923e-47 |
| MsG0480021900.01 | MsG0880045185.01 | 0.806837 | 6.776122e-50 | 3.715801e-47 |
| MsG0480022094.01 | MsG0880045185.01 | 0.819520 | 1.112701e-52 | 8.582145e-50 |
| MsG0480022115.01 | MsG0880045185.01 | 0.817938 | 2.543524e-52 | 1.877857e-49 |
| MsG0480022228.01 | MsG0880045185.01 | 0.840315 | 9.360801e-58 | 1.328209e-54 |
| MsG0480022597.01 | MsG0880045185.01 | 0.825446 | 4.666905e-54 | 4.254487e-51 |
| MsG0480022598.01 | MsG0880045185.01 | 0.821499 | 3.908705e-53 | 3.185278e-50 |
| MsG0480023099.01 | MsG0880045185.01 | 0.809150 | 2.181096e-50 | 1.270815e-47 |
| MsG0480023421.01 | MsG0880045185.01 | 0.820266 | 7.511704e-53 | 5.915303e-50 |
| MsG0480023451.01 | MsG0880045185.01 | 0.803414 | 3.526548e-49 | 1.771061e-46 |
| MsG0480023500.01 | MsG0880045185.01 | 0.803697 | 3.080169e-49 | 1.558191e-46 |
| MsG0480023718.01 | MsG0880045185.01 | 0.818353 | 2.048950e-52 | 1.530229e-49 |
| MsG0580024157.01 | MsG0880045185.01 | 0.849069 | 4.095523e-60 | 7.672749e-57 |
| MsG0580024374.01 | MsG0880045185.01 | 0.800251 | 1.572940e-48 | 7.289446e-46 |
| MsG0580024418.01 | MsG0880045185.01 | 0.812444 | 4.225701e-51 | 2.687431e-48 |
| MsG0580024819.01 | MsG0880045185.01 | 0.851413 | 9.021321e-61 | 1.824618e-57 |
| MsG0580024960.01 | MsG0880045185.01 | 0.817312 | 3.520231e-52 | 2.554693e-49 |
| MsG0580025025.01 | MsG0880045185.01 | 0.801826 | 7.495131e-49 | 3.614784e-46 |
| MsG0580025072.01 | MsG0880045185.01 | 0.825948 | 3.547841e-54 | 3.281363e-51 |
| MsG0580025236.01 | MsG0880045185.01 | 0.816716 | 4.790810e-52 | 3.420607e-49 |
| MsG0580025532.01 | MsG0880045185.01 | 0.804678 | 1.924584e-49 | 9.985067e-47 |
| MsG0580025555.01 | MsG0880045185.01 | 0.830040 | 3.673409e-55 | 3.825890e-52 |
| MsG0380015289.01 | MsG0880045185.01 | 0.847010 | 1.515494e-59 | 2.656716e-56 |
| MsG0380015347.01 | MsG0880045185.01 | 0.830681 | 2.561030e-55 | 2.717618e-52 |
| MsG0380015702.01 | MsG0880045185.01 | 0.848814 | 4.823069e-60 | 8.960114e-57 |
| MsG0380016227.01 | MsG0880045185.01 | 0.829849 | 4.090146e-55 | 4.237341e-52 |
| MsG0380016510.01 | MsG0880045185.01 | 0.846197 | 2.527040e-59 | 4.315398e-56 |
| MsG0380016802.01 | MsG0880045185.01 | 0.805333 | 1.404057e-49 | 7.408132e-47 |
| MsG0380017055.01 | MsG0880045185.01 | 0.830121 | 3.510764e-55 | 3.664999e-52 |
| MsG0380017195.01 | MsG0880045185.01 | 0.835541 | 1.579926e-56 | 1.937896e-53 |
| MsG0380017604.01 | MsG0880045185.01 | 0.802576 | 5.254172e-49 | 2.582756e-46 |
| MsG0380017631.01 | MsG0880045185.01 | 0.802827 | 4.664182e-49 | 2.307691e-46 |
| MsG0580027261.01 | MsG0880045185.01 | 0.844934 | 5.558070e-59 | 9.114794e-56 |
| MsG0580027659.01 | MsG0880045185.01 | 0.820466 | 6.756579e-53 | 5.350475e-50 |
| MsG0580027807.01 | MsG0880045185.01 | 0.829987 | 3.785106e-55 | 3.936344e-52 |
| MsG0680030321.01 | MsG0880045185.01 | 0.806290 | 8.840573e-50 | 4.780364e-47 |
| MsG0680030685.01 | MsG0880045185.01 | 0.802294 | 6.006794e-49 | 2.931734e-46 |
| MsG0280006935.01 | MsG0880045185.01 | 0.800837 | 1.195129e-48 | 5.621491e-46 |
| MsG0280007484.01 | MsG0880045185.01 | 0.808053 | 3.741133e-50 | 2.117474e-47 |
| MsG0280007764.01 | MsG0880045185.01 | 0.839090 | 1.950835e-57 | 2.665432e-54 |
| MsG0280007984.01 | MsG0880045185.01 | 0.821786 | 3.355753e-53 | 2.757032e-50 |
| MsG0280009509.01 | MsG0880045185.01 | 0.837727 | 4.383106e-57 | 5.744994e-54 |
| MsG0680035663.01 | MsG0880045185.01 | 0.830877 | 2.292248e-55 | 2.446494e-52 |
| MsG0780036630.01 | MsG0880045185.01 | 0.850608 | 1.521616e-60 | 2.996959e-57 |
| MsG0780036635.01 | MsG0880045185.01 | 0.831574 | 1.545231e-55 | 1.683791e-52 |
| MsG0780036773.01 | MsG0880045185.01 | 0.836777 | 7.672273e-57 | 9.767842e-54 |
| MsG0780037975.01 | MsG0880045185.01 | 0.806653 | 7.410240e-50 | 4.043936e-47 |
| MsG0780038386.01 | MsG0880045185.01 | 0.804850 | 1.771862e-49 | 9.234100e-47 |
| MsG0780039712.01 | MsG0880045185.01 | 0.818647 | 1.757917e-52 | 1.323407e-49 |
| MsG0780040047.01 | MsG0880045185.01 | 0.815849 | 7.486552e-52 | 5.219798e-49 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880045185.01.T01 | MTR_8g067280 | 95.625 | 160 | 5 | 1 | 1 | 160 | 491 | 648 | 2.13e-101 | 304 |
| MsG0880045185.01.T01 | MTR_5g030430 | 66.038 | 159 | 50 | 2 | 1 | 158 | 522 | 677 | 3.48e-60 | 197 |
| MsG0880045185.01.T01 | MTR_8g024790 | 39.073 | 151 | 72 | 2 | 1 | 147 | 320 | 454 | 6.61e-26 | 102 |
| MsG0880045185.01.T01 | MTR_8g024770 | 40.541 | 148 | 78 | 4 | 1 | 147 | 308 | 446 | 1.21e-23 | 95.9 |
| MsG0880045185.01.T01 | MTR_8g027495 | 30.921 | 152 | 83 | 4 | 1 | 151 | 487 | 617 | 9.23e-16 | 73.9 |
| MsG0880045185.01.T01 | MTR_7g117670 | 25.658 | 152 | 91 | 3 | 1 | 151 | 431 | 561 | 1.16e-12 | 65.1 |
| MsG0880045185.01.T01 | MTR_0194s0050 | 31.429 | 175 | 88 | 9 | 2 | 152 | 217 | 383 | 1.89e-11 | 61.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880045185.01.T01 | AT4G17880 | 56.790 | 162 | 47 | 2 | 1 | 157 | 445 | 588 | 9.35e-51 | 171 |
| MsG0880045185.01.T01 | AT1G32640 | 59.355 | 155 | 51 | 2 | 1 | 155 | 481 | 623 | 3.98e-49 | 167 |
| MsG0880045185.01.T01 | AT5G46760 | 55.128 | 156 | 61 | 2 | 1 | 156 | 444 | 590 | 1.09e-48 | 165 |
| MsG0880045185.01.T01 | AT5G46830 | 49.359 | 156 | 60 | 5 | 1 | 154 | 372 | 510 | 4.61e-33 | 122 |
| MsG0880045185.01.T01 | AT4G00870 | 36.719 | 128 | 59 | 3 | 1 | 122 | 278 | 389 | 6.82e-15 | 71.2 |
| MsG0880045185.01.T01 | AT1G01260 | 30.464 | 151 | 68 | 2 | 1 | 151 | 462 | 575 | 6.94e-14 | 68.6 |
| MsG0880045185.01.T01 | AT1G01260 | 30.464 | 151 | 68 | 2 | 1 | 151 | 462 | 575 | 6.94e-14 | 68.6 |
| MsG0880045185.01.T01 | AT1G01260 | 30.464 | 151 | 68 | 2 | 1 | 151 | 462 | 575 | 6.94e-14 | 68.6 |
Find 27 sgRNAs with CRISPR-Local
Find 29 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCTTGTGCATCACCAATTT+TGG | 0.145524 | 8:-55507206 | None:intergenic |
| TCTCTTCTTTCTTCCAAAAT+TGG | 0.173669 | 8:+55507193 | MsG0880045185.01.T01:CDS |
| GGATATTGAAGTGAAGATTA+TGG | 0.243770 | 8:+55506985 | MsG0880045185.01.T01:CDS |
| CTCTTCTAAGTTAATTGACT+TGG | 0.357805 | 8:+55506964 | MsG0880045185.01.T01:CDS |
| AGGTGAATTGGAGAAACAAT+TGG | 0.405166 | 8:+55506835 | MsG0880045185.01.T01:CDS |
| TGGGTTGGGATGCTATGATT+AGG | 0.406285 | 8:+55507005 | MsG0880045185.01.T01:CDS |
| GATATTGAAGTGAAGATTAT+GGG | 0.406522 | 8:+55506986 | MsG0880045185.01.T01:CDS |
| GGAATCGTCAAAAGGTGAAT+TGG | 0.427183 | 8:+55506823 | MsG0880045185.01.T01:CDS |
| TCATCCTGCGGCGAAGTTGA+TGG | 0.465184 | 8:+55507048 | MsG0880045185.01.T01:CDS |
| GGGTGCAACAAAGAAGGAAC+TGG | 0.478542 | 8:+55506856 | MsG0880045185.01.T01:CDS |
| TGAAGTGAAGATTATGGGTT+GGG | 0.485063 | 8:+55506991 | MsG0880045185.01.T01:CDS |
| GCCGCCATCAACTTCGCCGC+AGG | 0.505374 | 8:-55507052 | None:intergenic |
| GAAATCGAAGCTACAAGGGC+TGG | 0.510964 | 8:+55506802 | MsG0880045185.01.T01:CDS |
| TCAACAAGCTTCTGTTAACA+TGG | 0.511118 | 8:+55507138 | MsG0880045185.01.T01:CDS |
| TTGAAGTGAAGATTATGGGT+TGG | 0.525361 | 8:+55506990 | MsG0880045185.01.T01:CDS |
| GGTGAATTGGAGAAACAATT+GGG | 0.530956 | 8:+55506836 | MsG0880045185.01.T01:CDS |
| TCCAAAATTGGTGATGCACA+AGG | 0.537190 | 8:+55507205 | MsG0880045185.01.T01:CDS |
| CAAGGGCTGGAATCGTCAAA+AGG | 0.538390 | 8:+55506815 | MsG0880045185.01.T01:CDS |
| AATTCCATTAGATAAAGAAA+AGG | 0.545738 | 8:+55506919 | MsG0880045185.01.T01:CDS |
| GAATTGAAATCGAAGCTACA+AGG | 0.554225 | 8:+55506797 | MsG0880045185.01.T01:CDS |
| ACAATTGGGTGCAACAAAGA+AGG | 0.555028 | 8:+55506850 | MsG0880045185.01.T01:CDS |
| ATGGACAAAGCATCGCTGCT+AGG | 0.569855 | 8:+55506752 | MsG0880045185.01.T01:CDS |
| GGCGTTGAAAGACTTAGACT+TGG | 0.610935 | 8:+55507072 | MsG0880045185.01.T01:CDS |
| CAACAAGCTTCTGTTAACAT+GGG | 0.613453 | 8:+55507139 | MsG0880045185.01.T01:CDS |
| TCCTGCGGCGAAGTTGATGG+CGG | 0.639474 | 8:+55507051 | MsG0880045185.01.T01:CDS |
| AATTGAAATCGAAGCTACAA+GGG | 0.684780 | 8:+55506798 | MsG0880045185.01.T01:CDS |
| CAGCAAGAAGAATCATCCTG+CGG | 0.713584 | 8:+55507036 | MsG0880045185.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTCCATTAGATAAAGAAA+AGG | + | Chr8:55506919-55506938 | MsG0880045185.01.T01:CDS | 20.0% |
| !!! | TTTTCTTTATCTAATGGAAT+TGG | - | Chr8:55506920-55506939 | None:intergenic | 20.0% |
| ! | GATATTGAAGTGAAGATTAT+GGG | + | Chr8:55506986-55507005 | MsG0880045185.01.T01:CDS | 25.0% |
| !! | TTCTCCTTTTCTTTATCTAA+TGG | - | Chr8:55506926-55506945 | None:intergenic | 25.0% |
| AATTGAAATCGAAGCTACAA+GGG | + | Chr8:55506798-55506817 | MsG0880045185.01.T01:CDS | 30.0% | |
| CTCTTCTAAGTTAATTGACT+TGG | + | Chr8:55506964-55506983 | MsG0880045185.01.T01:CDS | 30.0% | |
| GGATATTGAAGTGAAGATTA+TGG | + | Chr8:55506985-55507004 | MsG0880045185.01.T01:CDS | 30.0% | |
| TCTCTTCTTTCTTCCAAAAT+TGG | + | Chr8:55507193-55507212 | MsG0880045185.01.T01:CDS | 30.0% | |
| AGGTGAATTGGAGAAACAAT+TGG | + | Chr8:55506835-55506854 | MsG0880045185.01.T01:CDS | 35.0% | |
| CAACAAGCTTCTGTTAACAT+GGG | + | Chr8:55507139-55507158 | MsG0880045185.01.T01:CDS | 35.0% | |
| GAATTGAAATCGAAGCTACA+AGG | + | Chr8:55506797-55506816 | MsG0880045185.01.T01:CDS | 35.0% | |
| GGTGAATTGGAGAAACAATT+GGG | + | Chr8:55506836-55506855 | MsG0880045185.01.T01:CDS | 35.0% | |
| TCAACAAGCTTCTGTTAACA+TGG | + | Chr8:55507138-55507157 | MsG0880045185.01.T01:CDS | 35.0% | |
| TGAAGTGAAGATTATGGGTT+GGG | + | Chr8:55506991-55507010 | MsG0880045185.01.T01:CDS | 35.0% | |
| TTGAAGTGAAGATTATGGGT+TGG | + | Chr8:55506990-55507009 | MsG0880045185.01.T01:CDS | 35.0% | |
| ACAATTGGGTGCAACAAAGA+AGG | + | Chr8:55506850-55506869 | MsG0880045185.01.T01:CDS | 40.0% | |
| GGAATCGTCAAAAGGTGAAT+TGG | + | Chr8:55506823-55506842 | MsG0880045185.01.T01:CDS | 40.0% | |
| ! | TCCTTGTGCATCACCAATTT+TGG | - | Chr8:55507209-55507228 | None:intergenic | 40.0% |
| !! | TCCAAAATTGGTGATGCACA+AGG | + | Chr8:55507205-55507224 | MsG0880045185.01.T01:CDS | 40.0% |
| CAGCAAGAAGAATCATCCTG+CGG | + | Chr8:55507036-55507055 | MsG0880045185.01.T01:CDS | 45.0% | |
| ! | GGCGTTGAAAGACTTAGACT+TGG | + | Chr8:55507072-55507091 | MsG0880045185.01.T01:CDS | 45.0% |
| ! | TGGGTTGGGATGCTATGATT+AGG | + | Chr8:55507005-55507024 | MsG0880045185.01.T01:CDS | 45.0% |
| CAAGGGCTGGAATCGTCAAA+AGG | + | Chr8:55506815-55506834 | MsG0880045185.01.T01:CDS | 50.0% | |
| GAAATCGAAGCTACAAGGGC+TGG | + | Chr8:55506802-55506821 | MsG0880045185.01.T01:CDS | 50.0% | |
| GGGTGCAACAAAGAAGGAAC+TGG | + | Chr8:55506856-55506875 | MsG0880045185.01.T01:CDS | 50.0% | |
| !! | ATGGACAAAGCATCGCTGCT+AGG | + | Chr8:55506752-55506771 | MsG0880045185.01.T01:CDS | 50.0% |
| TCATCCTGCGGCGAAGTTGA+TGG | + | Chr8:55507048-55507067 | MsG0880045185.01.T01:CDS | 55.0% | |
| !! | TCCTGCGGCGAAGTTGATGG+CGG | + | Chr8:55507051-55507070 | MsG0880045185.01.T01:CDS | 60.0% |
| GCCGCCATCAACTTCGCCGC+AGG | - | Chr8:55507055-55507074 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr8 | gene | 55506752 | 55507234 | 55506752 | ID=MsG0880045185.01;Name=MsG0880045185.01 |
| Chr8 | mRNA | 55506752 | 55507234 | 55506752 | ID=MsG0880045185.01.T01;Parent=MsG0880045185.01;Name=MsG0880045185.01.T01;_AED=0.42;_eAED=0.42;_QI=0|-1|0|1|-1|1|1|0|160 |
| Chr8 | exon | 55506752 | 55507234 | 55506752 | ID=MsG0880045185.01.T01:exon:23924;Parent=MsG0880045185.01.T01 |
| Chr8 | CDS | 55506752 | 55507234 | 55506752 | ID=MsG0880045185.01.T01:cds;Parent=MsG0880045185.01.T01 |
| Gene Sequence |
| Protein sequence |
