Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180004610.01.T01 | XP_003604118.1 | 97.516 | 322 | 8 | 0 | 1 | 322 | 1 | 322 | 0 | 653 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180004610.01.T01 | I6YGS0 | 35.562 | 329 | 189 | 7 | 1 | 319 | 1 | 316 | 4.53E-67 | 216 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180004610.01.T01 | G7JUF4 | 97.516 | 322 | 8 | 0 | 1 | 322 | 1 | 322 | 0.0 | 653 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0180000148.01 | MsG0180004610.01 | 0.805592 | 1.239332e-49 | 6.582659e-47 |
| MsG0180000459.01 | MsG0180004610.01 | -0.810970 | 8.844477e-51 | 5.408133e-48 |
| MsG0180000583.01 | MsG0180004610.01 | 0.810592 | 1.067760e-50 | 6.462769e-48 |
| MsG0180001029.01 | MsG0180004610.01 | 0.820264 | 7.517217e-53 | 5.919424e-50 |
| MsG0180001054.01 | MsG0180004610.01 | -0.805455 | 1.324065e-49 | 7.008162e-47 |
| MsG0180001827.01 | MsG0180004610.01 | -0.803040 | 4.214584e-49 | 2.096339e-46 |
| MsG0180002238.01 | MsG0180004610.01 | 0.804098 | 2.542459e-49 | 1.299521e-46 |
| MsG0180003235.01 | MsG0180004610.01 | 0.828979 | 6.652791e-55 | 6.716800e-52 |
| MsG0180003320.01 | MsG0180004610.01 | 0.802974 | 4.348854e-49 | 2.159442e-46 |
| MsG0180003604.01 | MsG0180004610.01 | 0.801095 | 1.058310e-48 | 5.010933e-46 |
| MsG0180004580.01 | MsG0180004610.01 | -0.806136 | 9.521524e-50 | 5.128477e-47 |
| MsG0180004581.01 | MsG0180004610.01 | -0.811808 | 5.816534e-51 | 3.635777e-48 |
| MsG0180004610.01 | MsG0180004626.01 | 0.897261 | 1.669397e-76 | 1.870492e-72 |
| MsG0180004610.01 | MsG0180004773.01 | -0.815011 | 1.150015e-51 | 7.837009e-49 |
| MsG0180004610.01 | MsG0180005267.01 | 0.802279 | 6.050478e-49 | 2.951858e-46 |
| MsG0180004610.01 | MsG0180005648.01 | 0.810684 | 1.019915e-50 | 6.188513e-48 |
| MsG0180004610.01 | MsG0180005984.01 | 0.808828 | 2.555911e-50 | 1.476382e-47 |
| MsG0180004610.01 | MsG0280006381.01 | -0.813249 | 2.816538e-51 | 1.829750e-48 |
| MsG0180004610.01 | MsG0280007016.01 | -0.803869 | 2.837115e-49 | 1.441679e-46 |
| MsG0180004610.01 | MsG0280007017.01 | -0.818718 | 1.693430e-52 | 1.277415e-49 |
| MsG0180004610.01 | MsG0280009079.01 | -0.808826 | 2.558390e-50 | 1.477725e-47 |
| MsG0180004610.01 | MsG0280009094.01 | -0.809463 | 1.868865e-50 | 1.097988e-47 |
| MsG0180004610.01 | MsG0280009526.01 | 0.825477 | 4.589624e-54 | 4.187782e-51 |
| MsG0180004610.01 | MsG0280009657.01 | 0.803839 | 2.877582e-49 | 1.461090e-46 |
| MsG0180004610.01 | MsG0280010019.01 | 0.821174 | 4.644594e-53 | 3.751127e-50 |
| MsG0180004610.01 | MsG0280010461.01 | -0.800841 | 1.192951e-48 | 5.611852e-46 |
| MsG0180004610.01 | MsG0280011281.01 | -0.832957 | 7.026911e-56 | 7.976662e-53 |
| MsG0180004610.01 | MsG0380013843.01 | 0.810902 | 9.149181e-51 | 5.584074e-48 |
| MsG0180004610.01 | MsG0380014639.01 | -0.826898 | 2.106918e-54 | 2.002252e-51 |
| MsG0180004610.01 | MsG0380014642.01 | -0.802760 | 4.813927e-49 | 2.377612e-46 |
| MsG0180004610.01 | MsG0380015110.01 | 0.802017 | 6.849149e-49 | 3.319223e-46 |
| MsG0180004610.01 | MsG0380015369.01 | 0.807712 | 4.421014e-50 | 2.480049e-47 |
| MsG0180004610.01 | MsG0380016377.01 | 0.818317 | 2.087726e-52 | 1.557527e-49 |
| MsG0180004610.01 | MsG0380017168.01 | 0.839047 | 2.001426e-57 | 2.730791e-54 |
| MsG0180004610.01 | MsG0380017610.01 | 0.803072 | 4.150769e-49 | 2.066226e-46 |
| MsG0180004610.01 | MsG0380017812.01 | -0.810453 | 1.143866e-50 | 6.897694e-48 |
| MsG0180004610.01 | MsG0480018201.01 | -0.824619 | 7.316435e-54 | 6.515441e-51 |
| MsG0180004610.01 | MsG0480018202.01 | -0.827548 | 1.472221e-54 | 1.425780e-51 |
| MsG0180004610.01 | MsG0480018203.01 | -0.827201 | 1.783371e-54 | 1.709903e-51 |
| MsG0180004610.01 | MsG0480019046.01 | -0.813347 | 2.680197e-51 | 1.745990e-48 |
| MsG0180004610.01 | MsG0480019146.01 | 0.829453 | 5.104866e-55 | 5.226840e-52 |
| MsG0180004610.01 | MsG0480019171.01 | 0.810334 | 1.213680e-50 | 7.295689e-48 |
| MsG0180004610.01 | MsG0480019217.01 | 0.809987 | 1.442112e-50 | 8.591094e-48 |
| MsG0180004610.01 | MsG0480019861.01 | -0.803769 | 2.976058e-49 | 1.508327e-46 |
| MsG0180004610.01 | MsG0480020810.01 | 0.815110 | 1.093265e-51 | 7.469724e-49 |
| MsG0180004610.01 | MsG0480021039.01 | -0.807049 | 6.110645e-50 | 3.369256e-47 |
| MsG0180004610.01 | MsG0480022721.01 | 0.816794 | 4.602052e-52 | 3.292814e-49 |
| MsG0180004610.01 | MsG0480023152.01 | -0.804260 | 2.352703e-49 | 1.207478e-46 |
| MsG0180004610.01 | MsG0480023469.01 | -0.802995 | 4.306351e-49 | 2.139462e-46 |
| MsG0180004610.01 | MsG0480023695.01 | -0.810228 | 1.279532e-50 | 7.669988e-48 |
| MsG0180004610.01 | MsG0580024087.01 | 0.806639 | 7.461807e-50 | 4.070623e-47 |
| MsG0180004610.01 | MsG0580024220.01 | 0.821594 | 3.716330e-53 | 3.036538e-50 |
| MsG0180004610.01 | MsG0580024591.01 | 0.803351 | 3.633266e-49 | 1.821644e-46 |
| MsG0180004610.01 | MsG0580025259.01 | -0.812559 | 3.988454e-51 | 2.544069e-48 |
| MsG0180004610.01 | MsG0580025633.01 | 0.801658 | 8.116458e-49 | 3.897601e-46 |
| MsG0180004610.01 | MsG0580026521.01 | 0.816303 | 5.927661e-52 | 4.185083e-49 |
| MsG0180004610.01 | MsG0580029764.01 | 0.802156 | 6.412264e-49 | 3.118594e-46 |
| MsG0180004610.01 | MsG0580029820.01 | -0.806281 | 8.875743e-50 | 4.798316e-47 |
| MsG0180004610.01 | MsG0580030133.01 | 0.802140 | 6.460512e-49 | 3.140703e-46 |
| MsG0180004610.01 | MsG0580030135.01 | 0.801761 | 7.731720e-49 | 3.722473e-46 |
| MsG0180004610.01 | MsG0680030613.01 | 0.805675 | 1.190444e-49 | 6.336633e-47 |
| MsG0180004610.01 | MsG0680030644.01 | -0.825193 | 5.355711e-54 | 4.848032e-51 |
| MsG0180004610.01 | MsG0680030878.01 | -0.807713 | 4.418792e-50 | 2.478888e-47 |
| MsG0180004610.01 | MsG0680030960.01 | 0.804522 | 2.074493e-49 | 1.071893e-46 |
| MsG0180004610.01 | MsG0680031200.01 | 0.805075 | 1.589960e-49 | 8.333766e-47 |
| MsG0180004610.01 | MsG0680035584.01 | -0.807453 | 5.018117e-50 | 2.796168e-47 |
| MsG0180004610.01 | MsG0780036471.01 | 0.806121 | 9.594483e-50 | 5.165763e-47 |
| MsG0180004610.01 | MsG0780036661.01 | 0.819840 | 9.403730e-53 | 7.318207e-50 |
| MsG0180004610.01 | MsG0780037458.01 | -0.800831 | 1.198136e-48 | 5.634826e-46 |
| MsG0180004610.01 | MsG0780038263.01 | -0.815660 | 8.249501e-52 | 5.722557e-49 |
| MsG0180004610.01 | MsG0780039287.01 | -0.807482 | 4.946978e-50 | 2.758584e-47 |
| MsG0180004610.01 | MsG0780039839.01 | -0.806334 | 8.652295e-50 | 4.683753e-47 |
| MsG0180004610.01 | MsG0780040497.01 | 0.819731 | 9.955113e-53 | 7.723795e-50 |
| MsG0180004610.01 | MsG0780040831.01 | 0.808446 | 3.085186e-50 | 1.764478e-47 |
| MsG0180004610.01 | MsG0780041620.01 | -0.806768 | 7.005565e-50 | 3.834688e-47 |
| MsG0180004610.01 | MsG0880041835.01 | -0.808272 | 3.360319e-50 | 1.913104e-47 |
| MsG0180004610.01 | MsG0880042261.01 | 0.800227 | 1.590830e-48 | 7.367780e-46 |
| MsG0180004610.01 | MsG0880042591.01 | 0.847014 | 1.511456e-59 | 2.649972e-56 |
| MsG0180004610.01 | MsG0880042740.01 | 0.802048 | 6.748876e-49 | 3.273257e-46 |
| MsG0180004610.01 | MsG0880043998.01 | 0.807851 | 4.129692e-50 | 2.324980e-47 |
| MsG0180004610.01 | MsG0880044027.01 | 0.802213 | 6.241227e-49 | 3.039725e-46 |
| MsG0180004610.01 | MsG0880045063.01 | -0.810500 | 1.117920e-50 | 6.749569e-48 |
| MsG0180004610.01 | MsG0880046010.01 | -0.812364 | 4.399246e-51 | 2.791666e-48 |
| MsG0180004610.01 | MsG0880046341.01 | -0.805809 | 1.115642e-49 | 5.959035e-47 |
| MsG0180004610.01 | MsG0880046870.01 | 0.807302 | 5.401397e-50 | 2.997975e-47 |
| MsG0180004610.01 | MsG0880046932.01 | 0.801754 | 7.757531e-49 | 3.734260e-46 |
PPI
| Gene1 | Gene2 | Type |
|---|---|---|
| MsG0180004610.01 | MsG0880047066.01 | PPI |
| MsG0780041313.01 | MsG0180004610.01 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180004610.01.T01 | MTR_4g005160 | 97.516 | 322 | 8 | 0 | 1 | 322 | 1 | 322 | 0.0 | 653 |
| MsG0180004610.01.T01 | MTR_7g113030 | 72.755 | 323 | 83 | 3 | 1 | 322 | 1 | 319 | 0.0 | 503 |
| MsG0180004610.01.T01 | MTR_7g113050 | 72.446 | 323 | 84 | 3 | 1 | 322 | 1 | 319 | 0.0 | 502 |
| MsG0180004610.01.T01 | MTR_7g113020 | 73.065 | 323 | 82 | 3 | 1 | 322 | 1 | 319 | 1.42e-180 | 501 |
| MsG0180004610.01.T01 | MTR_7g112615 | 72.136 | 323 | 85 | 3 | 1 | 322 | 1 | 319 | 6.92e-179 | 497 |
| MsG0180004610.01.T01 | MTR_7g112620 | 70.898 | 323 | 89 | 3 | 1 | 322 | 1 | 319 | 7.52e-177 | 492 |
| MsG0180004610.01.T01 | MTR_7g112960 | 68.111 | 323 | 98 | 3 | 1 | 322 | 1 | 319 | 2.21e-166 | 466 |
| MsG0180004610.01.T01 | MTR_7g112963 | 67.492 | 323 | 100 | 3 | 1 | 322 | 1 | 319 | 2.98e-163 | 457 |
| MsG0180004610.01.T01 | MTR_7g112970 | 68.111 | 323 | 95 | 5 | 1 | 322 | 1 | 316 | 2.70e-162 | 455 |
| MsG0180004610.01.T01 | MTR_7g113050 | 74.274 | 241 | 58 | 2 | 1 | 240 | 1 | 238 | 5.59e-136 | 385 |
| MsG0180004610.01.T01 | MTR_7g108825 | 57.143 | 322 | 133 | 3 | 1 | 322 | 1 | 317 | 2.03e-133 | 382 |
| MsG0180004610.01.T01 | MTR_7g112615 | 73.444 | 241 | 60 | 2 | 1 | 240 | 1 | 238 | 2.20e-133 | 379 |
| MsG0180004610.01.T01 | MTR_4g120240 | 57.099 | 324 | 132 | 4 | 1 | 322 | 37 | 355 | 7.76e-133 | 382 |
| MsG0180004610.01.T01 | MTR_7g113010 | 65.854 | 287 | 89 | 5 | 1 | 284 | 1 | 281 | 1.02e-131 | 387 |
| MsG0180004610.01.T01 | MTR_1g083480 | 98.101 | 158 | 3 | 0 | 1 | 158 | 1 | 158 | 1.31e-114 | 329 |
| MsG0180004610.01.T01 | MTR_7g108825 | 57.083 | 240 | 99 | 2 | 1 | 240 | 1 | 236 | 1.83e-96 | 285 |
| MsG0180004610.01.T01 | MTR_8g076680 | 44.410 | 322 | 172 | 5 | 1 | 322 | 3 | 317 | 9.69e-94 | 281 |
| MsG0180004610.01.T01 | MTR_7g112615 | 74.691 | 162 | 37 | 2 | 1 | 161 | 1 | 159 | 5.05e-86 | 256 |
| MsG0180004610.01.T01 | MTR_8g076680 | 46.667 | 240 | 124 | 2 | 1 | 240 | 3 | 238 | 5.59e-76 | 233 |
| MsG0180004610.01.T01 | MTR_7g112910 | 48.400 | 250 | 70 | 6 | 74 | 322 | 4 | 195 | 1.54e-70 | 218 |
| MsG0180004610.01.T01 | MTR_2g090240 | 36.923 | 325 | 186 | 8 | 1 | 321 | 1 | 310 | 1.38e-62 | 201 |
| MsG0180004610.01.T01 | MTR_2g090245 | 36.000 | 325 | 189 | 8 | 1 | 321 | 1 | 310 | 3.78e-61 | 197 |
| MsG0180004610.01.T01 | MTR_4g089040 | 35.152 | 330 | 184 | 9 | 1 | 321 | 1 | 309 | 7.66e-60 | 194 |
| MsG0180004610.01.T01 | MTR_4g089060 | 34.462 | 325 | 193 | 7 | 1 | 321 | 1 | 309 | 1.38e-59 | 193 |
| MsG0180004610.01.T01 | MTR_4g089060 | 33.721 | 344 | 197 | 9 | 1 | 321 | 1 | 336 | 1.07e-54 | 182 |
| MsG0180004610.01.T01 | MTR_4g089060 | 36.864 | 236 | 136 | 4 | 1 | 233 | 1 | 226 | 4.88e-50 | 166 |
| MsG0180004610.01.T01 | MTR_3g024250 | 67.273 | 110 | 33 | 1 | 45 | 154 | 1 | 107 | 2.93e-49 | 161 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180004610.01.T01 | AT3G05600 | 60.061 | 328 | 121 | 6 | 1 | 322 | 1 | 324 | 1.47e-145 | 413 |
| MsG0180004610.01.T01 | AT4G02340 | 54.630 | 324 | 137 | 5 | 1 | 322 | 1 | 316 | 4.77e-131 | 376 |
| MsG0180004610.01.T01 | AT4G15960 | 52.280 | 329 | 145 | 6 | 1 | 322 | 51 | 374 | 2.50e-116 | 341 |
| MsG0180004610.01.T01 | AT2G26740 | 55.692 | 325 | 134 | 6 | 4 | 322 | 1 | 321 | 5.28e-116 | 338 |
| MsG0180004610.01.T01 | AT2G26750 | 53.704 | 324 | 141 | 6 | 4 | 322 | 1 | 320 | 3.61e-110 | 323 |
| MsG0180004610.01.T01 | AT3G05600 | 61.382 | 246 | 86 | 5 | 1 | 240 | 1 | 243 | 5.73e-110 | 320 |
| MsG0180004610.01.T01 | AT4G15955 | 49.398 | 332 | 125 | 7 | 3 | 322 | 4 | 304 | 3.34e-101 | 300 |
| MsG0180004610.01.T01 | AT3G51000 | 44.411 | 331 | 158 | 8 | 3 | 322 | 4 | 319 | 2.53e-92 | 278 |
| MsG0180004610.01.T01 | AT4G15955 | 59.777 | 179 | 58 | 4 | 3 | 170 | 4 | 179 | 2.54e-69 | 214 |
| MsG0180004610.01.T01 | AT4G15955 | 60.000 | 170 | 54 | 4 | 3 | 161 | 4 | 170 | 5.53e-66 | 205 |
Find 100 sgRNAs with CRISPR-Local
Find 121 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCAGTGGCCCCTGATCTTC+GGG | 0.210716 | 1:-80304560 | MsG0180004610.01.T01:CDS |
| TGATGTCTTGTGCTGCTTCT+TGG | 0.213872 | 1:+80303562 | None:intergenic |
| CTATTATGTGTGCAGATTTC+AGG | 0.219315 | 1:-80304266 | MsG0180004610.01.T01:intron |
| ACATAGGCCTTGACTCTTTC+CGG | 0.225048 | 1:+80304376 | None:intergenic |
| CTCTTGGCGCCATCAGATTC+TGG | 0.252842 | 1:-80304605 | MsG0180004610.01.T01:CDS |
| GCATCATAGTTGTTTACTTT+GGG | 0.258817 | 1:+80304313 | None:intergenic |
| GTGCAGTGGCCCCTGATCTT+CGG | 0.304764 | 1:-80304561 | MsG0180004610.01.T01:CDS |
| GTTACTAAATTCAACAAAAC+TGG | 0.304863 | 1:-80303930 | MsG0180004610.01.T01:CDS |
| CCAGTTCCATACCCTCCTTT+TGG | 0.320325 | 1:+80304017 | None:intergenic |
| CAAGAAAGATGTTCCAGGTT+TGG | 0.350912 | 1:-80303625 | MsG0180004610.01.T01:CDS |
| GATGCATTTCATGCCAAGTA+TGG | 0.358360 | 1:-80304295 | MsG0180004610.01.T01:CDS |
| TCACCGTAGCCCCGAAGATC+AGG | 0.368042 | 1:+80304550 | None:intergenic |
| CACAGAATAGTAGAAGTAAA+TGG | 0.369517 | 1:-80304703 | MsG0180004610.01.T01:CDS |
| GTGTAGCTGGTCACTGATTC+CGG | 0.373779 | 1:+80304517 | None:intergenic |
| TTCAACAAAACTGGCTTCAC+TGG | 0.380968 | 1:-80303921 | MsG0180004610.01.T01:CDS |
| TGCATCATAGTTGTTTACTT+TGG | 0.388996 | 1:+80304312 | None:intergenic |
| TGCAGGATATCTTACCATCT+TGG | 0.393575 | 1:-80303980 | MsG0180004610.01.T01:CDS |
| TGGAAAAGCCGAAGCCGAAT+TGG | 0.398454 | 1:-80304108 | MsG0180004610.01.T01:CDS |
| CCAAAAGGAGGGTATGGAAC+TGG | 0.402502 | 1:-80304017 | MsG0180004610.01.T01:CDS |
| TCCCTGAGTTATGGTACTCT+TGG | 0.411714 | 1:-80304621 | MsG0180004610.01.T01:CDS |
| TACTCCAGCCAATTCGGCTT+CGG | 0.419392 | 1:+80304100 | None:intergenic |
| ATAATAATCAAGATCTTCTT+CGG | 0.431491 | 1:+80303953 | None:intergenic |
| TCACCTGTAATGTACTTTAC+CGG | 0.433581 | 1:+80303705 | None:intergenic |
| CATTACAGGTGATTGTGGTT+TGG | 0.434737 | 1:-80303694 | MsG0180004610.01.T01:CDS |
| TGCACGGTTTCCCTGAGTTA+TGG | 0.436444 | 1:-80304630 | MsG0180004610.01.T01:CDS |
| GTACCGGTAAAGTACATTAC+AGG | 0.438457 | 1:-80303708 | MsG0180004610.01.T01:CDS |
| GCCCCTGATCTTCGGGGCTA+CGG | 0.442117 | 1:-80304553 | MsG0180004610.01.T01:CDS |
| TGTACCTTGTCGGACATGAT+TGG | 0.443115 | 1:-80304435 | MsG0180004610.01.T01:CDS |
| ATCACCAACAAGGTGAAAAC+AGG | 0.453861 | 1:+80304495 | None:intergenic |
| GGTAAGATATCCTGCATATC+CGG | 0.455206 | 1:+80303987 | None:intergenic |
| GTTCCATTCCGACCCTTCCT+TGG | 0.455873 | 1:-80304343 | MsG0180004610.01.T01:CDS |
| TTTGGGGTTTCTTCCAAGGA+AGG | 0.460713 | 1:+80304330 | None:intergenic |
| TTACTTTGGGGTTTCTTCCA+AGG | 0.467534 | 1:+80304326 | None:intergenic |
| GGCCACTGCACGGTAACCCT+TGG | 0.471280 | 1:+80304573 | None:intergenic |
| GGTTTCAAGAAAGATGTTCC+AGG | 0.471931 | 1:-80303630 | MsG0180004610.01.T01:CDS |
| TGGATTCAATCCGGATATGC+AGG | 0.474601 | 1:-80303997 | MsG0180004610.01.T01:CDS |
| TGTTCCAGGTTTGGAGGAAG+TGG | 0.476149 | 1:-80303616 | MsG0180004610.01.T01:CDS |
| AACACCTACTCCAGCCAATT+CGG | 0.482718 | 1:+80304094 | None:intergenic |
| GTACCTTGTCGGACATGATT+GGG | 0.482847 | 1:-80304434 | MsG0180004610.01.T01:CDS |
| AAAATGCATGTTGCAGAGAA+AGG | 0.492527 | 1:-80304676 | MsG0180004610.01.T01:CDS |
| AAGGTGAAAACAGGTGTAGC+TGG | 0.497712 | 1:+80304504 | None:intergenic |
| TTTGGAGGAAGTGGTTGTGC+AGG | 0.503362 | 1:-80303607 | MsG0180004610.01.T01:CDS |
| ATAATAGTCATCTCCATACT+TGG | 0.505750 | 1:+80304282 | None:intergenic |
| CTACGGTGAAACTGAAGCTC+CGG | 0.515024 | 1:-80304536 | MsG0180004610.01.T01:CDS |
| GAGGAAGTGGTTGTGCAGGA+AGG | 0.517437 | 1:-80303603 | MsG0180004610.01.T01:CDS |
| TTGGGGTTTCTTCCAAGGAA+GGG | 0.521536 | 1:+80304331 | None:intergenic |
| AAAGCCGAAGCCGAATTGGC+TGG | 0.521985 | 1:-80304104 | MsG0180004610.01.T01:CDS |
| CGCCAAGAGTACCATAACTC+AGG | 0.523914 | 1:+80304619 | None:intergenic |
| CATGATTGGGGTGCGATCAT+CGG | 0.526291 | 1:-80304421 | MsG0180004610.01.T01:CDS |
| CATCATAGTTGTTTACTTTG+GGG | 0.527231 | 1:+80304314 | None:intergenic |
| AACAAAACTGGCTTCACTGG+AGG | 0.529011 | 1:-80303918 | MsG0180004610.01.T01:CDS |
| GTATGTTTGCATGTTCCGAC+CGG | 0.531431 | 1:-80304395 | MsG0180004610.01.T01:CDS |
| GATTCTGGATTTGAGCTCCA+AGG | 0.531726 | 1:-80304590 | MsG0180004610.01.T01:CDS |
| AGGAAGTGGTTGTGCAGGAA+GGG | 0.538638 | 1:-80303602 | MsG0180004610.01.T01:CDS |
| ACAACCACTTCCTCCAAACC+TGG | 0.541024 | 1:+80303612 | None:intergenic |
| CACCGTAGCCCCGAAGATCA+GGG | 0.541844 | 1:+80304551 | None:intergenic |
| CTTCCAAGGAAGGGTCGGAA+TGG | 0.543706 | 1:+80304340 | None:intergenic |
| AAGTACATTACAGGTGATTG+TGG | 0.546047 | 1:-80303699 | MsG0180004610.01.T01:CDS |
| CCAGTGGTGTTGATGTTGCA+CGG | 0.546061 | 1:-80304646 | MsG0180004610.01.T01:CDS |
| GAAAGATGTTCCAGGTTTGG+AGG | 0.547019 | 1:-80303622 | MsG0180004610.01.T01:CDS |
| ATTCTGGATTTGAGCTCCAA+GGG | 0.550282 | 1:-80304589 | MsG0180004610.01.T01:CDS |
| CCGTGCAACATCAACACCAC+TGG | 0.550819 | 1:+80304646 | None:intergenic |
| TGGAACACTAAGACAAACAT+AGG | 0.551680 | 1:+80304360 | None:intergenic |
| ACATCACCATGGAGTGAAGT+AGG | 0.556604 | 1:-80303741 | MsG0180004610.01.T01:CDS |
| GTGGACAAAGTGTACCTTGT+CGG | 0.558093 | 1:-80304445 | MsG0180004610.01.T01:CDS |
| GGTTTCTTCCAAGGAAGGGT+CGG | 0.558393 | 1:+80304335 | None:intergenic |
| CTCCAAGGGTTACCGTGCAG+TGG | 0.559388 | 1:-80304575 | MsG0180004610.01.T01:CDS |
| ATTGCACTCATTGACTCTCT+AGG | 0.560324 | 1:-80304469 | MsG0180004610.01.T01:CDS |
| ACAAAACTGGCTTCACTGGA+GGG | 0.561868 | 1:-80303917 | MsG0180004610.01.T01:CDS |
| TCTTCTTCGGAAAGCCAAGA+TGG | 0.563903 | 1:+80303966 | None:intergenic |
| TTTGGGAAAATTGGAGGACC+GGG | 0.570933 | 1:+80304035 | None:intergenic |
| ATGGTTACTTTCCAGGAACT+GGG | 0.571538 | 1:-80303769 | MsG0180004610.01.T01:intron |
| AGTAGGAGTGGTAAATGTAC+CGG | 0.572295 | 1:-80303724 | MsG0180004610.01.T01:CDS |
| GTATGGAACTGGATTCAATC+CGG | 0.573575 | 1:-80304006 | MsG0180004610.01.T01:CDS |
| TGATAACATTGATAGGAACC+TGG | 0.573596 | 1:-80304128 | MsG0180004610.01.T01:intron |
| ACCACTCCTACTTCACTCCA+TGG | 0.577429 | 1:+80303735 | None:intergenic |
| ATGATGACAACGAGGAAACC+CGG | 0.579962 | 1:-80304053 | MsG0180004610.01.T01:CDS |
| GAAGATCAGGGGCCACTGCA+CGG | 0.580274 | 1:+80304563 | None:intergenic |
| ATACACTACGCCGAGTATGA+AGG | 0.580910 | 1:-80303670 | MsG0180004610.01.T01:CDS |
| ATTGGGGTGCGATCATCGGT+TGG | 0.592371 | 1:-80304417 | MsG0180004610.01.T01:CDS |
| AGCTCAAATCCAGAATCTGA+TGG | 0.613338 | 1:+80304596 | None:intergenic |
| GCCAAGAGTACCATAACTCA+GGG | 0.614710 | 1:+80304620 | None:intergenic |
| CATGTTGCAGAGAAAGGAGA+AGG | 0.616899 | 1:-80304670 | MsG0180004610.01.T01:CDS |
| ACCGTAGCCCCGAAGATCAG+GGG | 0.621226 | 1:+80304552 | None:intergenic |
| AGGCCTTGACTCTTTCCGGT+CGG | 0.623489 | 1:+80304380 | None:intergenic |
| GTTCCGACCGGAAAGAGTCA+AGG | 0.623865 | 1:-80304383 | MsG0180004610.01.T01:CDS |
| GCAGTGGCCCCTGATCTTCG+GGG | 0.625803 | 1:-80304559 | MsG0180004610.01.T01:CDS |
| ATGAAGGAATATATCCTCGA+TGG | 0.629060 | 1:-80303654 | MsG0180004610.01.T01:CDS |
| CACCCCAATCATGTCCGACA+AGG | 0.629611 | 1:+80304431 | None:intergenic |
| AGGATATATTCCTTCATACT+CGG | 0.633804 | 1:+80303660 | None:intergenic |
| ACCATGGAGTGAAGTAGGAG+TGG | 0.635510 | 1:-80303736 | MsG0180004610.01.T01:CDS |
| TACCTTGTCGGACATGATTG+GGG | 0.642774 | 1:-80304433 | MsG0180004610.01.T01:CDS |
| AAGGAATATATCCTCGATGG+TGG | 0.654767 | 1:-80303651 | MsG0180004610.01.T01:CDS |
| AGAGAAAGGAGAAGGTCCAG+TGG | 0.656472 | 1:-80304662 | MsG0180004610.01.T01:CDS |
| GAAGCCGAATTGGCTGGAGT+AGG | 0.676454 | 1:-80304098 | MsG0180004610.01.T01:CDS |
| ACTCATTGACTCTCTAGGTG+TGG | 0.677971 | 1:-80304464 | MsG0180004610.01.T01:CDS |
| GTGCAATGATATCACCAACA+AGG | 0.702915 | 1:+80304485 | None:intergenic |
| CTTTCTTGAAACCACCATCG+AGG | 0.706418 | 1:+80303640 | None:intergenic |
| ACTGGGAGCTAACATCACCA+TGG | 0.711994 | 1:-80303752 | MsG0180004610.01.T01:CDS |
| TGCGTAACATGATGACAACG+AGG | 0.737897 | 1:-80304061 | MsG0180004610.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TACTAAATACAACAAAATTT+AGG | - | Chr1:80304073-80304092 | MsG0180004610.01.T01:CDS | 15.0% |
| !! | ATAATAATCAAGATCTTCTT+CGG | + | Chr1:80304295-80304314 | None:intergenic | 20.0% |
| !! | CTTTAGTATATATAAAGACA+TGG | - | Chr1:80304028-80304047 | MsG0180004610.01.T01:CDS | 20.0% |
| !!! | ACTTTATTGATAACATTGAT+AGG | - | Chr1:80304110-80304129 | MsG0180004610.01.T01:CDS | 20.0% |
| ! | GTTACTAAATTCAACAAAAC+TGG | - | Chr1:80304315-80304334 | MsG0180004610.01.T01:CDS | 25.0% |
| AGGATATATTCCTTCATACT+CGG | + | Chr1:80304588-80304607 | None:intergenic | 30.0% | |
| ATAATAGTCATCTCCATACT+TGG | + | Chr1:80303966-80303985 | None:intergenic | 30.0% | |
| CACAGAATAGTAGAAGTAAA+TGG | - | Chr1:80303542-80303561 | MsG0180004610.01.T01:CDS | 30.0% | |
| CATCATAGTTGTTTACTTTG+GGG | + | Chr1:80303934-80303953 | None:intergenic | 30.0% | |
| CATCATGTTACGCAAAAAAT+AGG | + | Chr1:80304178-80304197 | None:intergenic | 30.0% | |
| GCATCATAGTTGTTTACTTT+GGG | + | Chr1:80303935-80303954 | None:intergenic | 30.0% | |
| TGCATCATAGTTGTTTACTT+TGG | + | Chr1:80303936-80303955 | None:intergenic | 30.0% | |
| AAAATGCATGTTGCAGAGAA+AGG | - | Chr1:80303569-80303588 | MsG0180004610.01.T01:CDS | 35.0% | |
| AAGTACATTACAGGTGATTG+TGG | - | Chr1:80304546-80304565 | MsG0180004610.01.T01:CDS | 35.0% | |
| ATGAAGGAATATATCCTCGA+TGG | - | Chr1:80304591-80304610 | MsG0180004610.01.T01:CDS | 35.0% | |
| CATTATCAGCTAGTGAAAAG+AGG | + | Chr1:80304459-80304478 | None:intergenic | 35.0% | |
| CTATTATGTGTGCAGATTTC+AGG | - | Chr1:80303979-80303998 | MsG0180004610.01.T01:CDS | 35.0% | |
| TCACCTGTAATGTACTTTAC+CGG | + | Chr1:80304543-80304562 | None:intergenic | 35.0% | |
| TGATAACATTGATAGGAACC+TGG | - | Chr1:80304117-80304136 | MsG0180004610.01.T01:intron | 35.0% | |
| TGGAACACTAAGACAAACAT+AGG | + | Chr1:80303888-80303907 | None:intergenic | 35.0% | |
| ! | CTCTTTTCACTAGCTGATAA+TGG | - | Chr1:80304457-80304476 | MsG0180004610.01.T01:CDS | 35.0% |
| AAGGAATATATCCTCGATGG+TGG | - | Chr1:80304594-80304613 | MsG0180004610.01.T01:CDS | 40.0% | |
| AGCTCAAATCCAGAATCTGA+TGG | + | Chr1:80303652-80303671 | None:intergenic | 40.0% | |
| AGTAGGAGTGGTAAATGTAC+CGG | - | Chr1:80304521-80304540 | MsG0180004610.01.T01:CDS | 40.0% | |
| ATCACCAACAAGGTGAAAAC+AGG | + | Chr1:80303753-80303772 | None:intergenic | 40.0% | |
| ATTCTGGATTTGAGCTCCAA+GGG | - | Chr1:80303656-80303675 | MsG0180004610.01.T01:CDS | 40.0% | |
| CAAGAAAGATGTTCCAGGTT+TGG | - | Chr1:80304620-80304639 | MsG0180004610.01.T01:CDS | 40.0% | |
| CATTACAGGTGATTGTGGTT+TGG | - | Chr1:80304551-80304570 | MsG0180004610.01.T01:CDS | 40.0% | |
| GATGCATTTCATGCCAAGTA+TGG | - | Chr1:80303950-80303969 | MsG0180004610.01.T01:CDS | 40.0% | |
| GGTAAGATATCCTGCATATC+CGG | + | Chr1:80304261-80304280 | None:intergenic | 40.0% | |
| GGTTTCAAGAAAGATGTTCC+AGG | - | Chr1:80304615-80304634 | MsG0180004610.01.T01:CDS | 40.0% | |
| GTATGGAACTGGATTCAATC+CGG | - | Chr1:80304239-80304258 | MsG0180004610.01.T01:intron | 40.0% | |
| GTGCAATGATATCACCAACA+AGG | + | Chr1:80303763-80303782 | None:intergenic | 40.0% | |
| TGCAGGATATCTTACCATCT+TGG | - | Chr1:80304265-80304284 | MsG0180004610.01.T01:intron | 40.0% | |
| ! | AATGGTTACTTTCCAGGAAC+TGG | - | Chr1:80304475-80304494 | MsG0180004610.01.T01:CDS | 40.0% |
| ! | ATGGTTACTTTCCAGGAACT+GGG | - | Chr1:80304476-80304495 | MsG0180004610.01.T01:CDS | 40.0% |
| ! | ATTTTCCCAAAAGGAGGGTA+TGG | - | Chr1:80304222-80304241 | MsG0180004610.01.T01:intron | 40.0% |
| ! | CTCCAATTTTCCCAAAAGGA+GGG | - | Chr1:80304217-80304236 | MsG0180004610.01.T01:intron | 40.0% |
| ! | GTACCGGTAAAGTACATTAC+AGG | - | Chr1:80304537-80304556 | MsG0180004610.01.T01:CDS | 40.0% |
| ! | TACACCTGTTTTCACCTTGT+TGG | - | Chr1:80303746-80303765 | MsG0180004610.01.T01:CDS | 40.0% |
| ! | TTCAACAAAACTGGCTTCAC+TGG | - | Chr1:80304324-80304343 | MsG0180004610.01.T01:CDS | 40.0% |
| !! | ATTGCACTCATTGACTCTCT+AGG | - | Chr1:80303776-80303795 | MsG0180004610.01.T01:intron | 40.0% |
| !! | GCTGATAATGGTTACTTTCC+AGG | - | Chr1:80304469-80304488 | MsG0180004610.01.T01:CDS | 40.0% |
| !! | TACCCTCCTTTTGGGAAAAT+TGG | + | Chr1:80304222-80304241 | None:intergenic | 40.0% |
| !! | TTACTTTGGGGTTTCTTCCA+AGG | + | Chr1:80303922-80303941 | None:intergenic | 40.0% |
| !! | TTTTGGGAAAATTGGAGGAC+CGG | + | Chr1:80304214-80304233 | None:intergenic | 40.0% |
| AACACCTACTCCAGCCAATT+CGG | + | Chr1:80304154-80304173 | None:intergenic | 45.0% | |
| AAGGTGAAAACAGGTGTAGC+TGG | + | Chr1:80303744-80303763 | None:intergenic | 45.0% | |
| ACATAGGCCTTGACTCTTTC+CGG | + | Chr1:80303872-80303891 | None:intergenic | 45.0% | |
| ACATCACCATGGAGTGAAGT+AGG | - | Chr1:80304504-80304523 | MsG0180004610.01.T01:CDS | 45.0% | |
| ATACACTACGCCGAGTATGA+AGG | - | Chr1:80304575-80304594 | MsG0180004610.01.T01:CDS | 45.0% | |
| ATGATGACAACGAGGAAACC+CGG | - | Chr1:80304192-80304211 | MsG0180004610.01.T01:intron | 45.0% | |
| CATGTTGCAGAGAAAGGAGA+AGG | - | Chr1:80303575-80303594 | MsG0180004610.01.T01:CDS | 45.0% | |
| CTTTCTTGAAACCACCATCG+AGG | + | Chr1:80304608-80304627 | None:intergenic | 45.0% | |
| GAAAGATGTTCCAGGTTTGG+AGG | - | Chr1:80304623-80304642 | MsG0180004610.01.T01:CDS | 45.0% | |
| GATTCTGGATTTGAGCTCCA+AGG | - | Chr1:80303655-80303674 | MsG0180004610.01.T01:CDS | 45.0% | |
| GTACCTTGTCGGACATGATT+GGG | - | Chr1:80303811-80303830 | MsG0180004610.01.T01:intron | 45.0% | |
| GTATGTTTGCATGTTCCGAC+CGG | - | Chr1:80303850-80303869 | MsG0180004610.01.T01:intron | 45.0% | |
| GTGGACAAAGTGTACCTTGT+CGG | - | Chr1:80303800-80303819 | MsG0180004610.01.T01:intron | 45.0% | |
| TACCTTGTCGGACATGATTG+GGG | - | Chr1:80303812-80303831 | MsG0180004610.01.T01:intron | 45.0% | |
| TCCCTGAGTTATGGTACTCT+TGG | - | Chr1:80303624-80303643 | MsG0180004610.01.T01:CDS | 45.0% | |
| TCTTCTTCGGAAAGCCAAGA+TGG | + | Chr1:80304282-80304301 | None:intergenic | 45.0% | |
| TGCGTAACATGATGACAACG+AGG | - | Chr1:80304184-80304203 | MsG0180004610.01.T01:intron | 45.0% | |
| TGGATTCAATCCGGATATGC+AGG | - | Chr1:80304248-80304267 | MsG0180004610.01.T01:intron | 45.0% | |
| TGTACCTTGTCGGACATGAT+TGG | - | Chr1:80303810-80303829 | MsG0180004610.01.T01:intron | 45.0% | |
| TTGGGGTTTCTTCCAAGGAA+GGG | + | Chr1:80303917-80303936 | None:intergenic | 45.0% | |
| TTTGGGAAAATTGGAGGACC+GGG | + | Chr1:80304213-80304232 | None:intergenic | 45.0% | |
| ! | AACAAAACTGGCTTCACTGG+AGG | - | Chr1:80304327-80304346 | MsG0180004610.01.T01:CDS | 45.0% |
| ! | ACAAAACTGGCTTCACTGGA+GGG | - | Chr1:80304328-80304347 | MsG0180004610.01.T01:CDS | 45.0% |
| ! | CAGTTCCATACCCTCCTTTT+GGG | + | Chr1:80304230-80304249 | None:intergenic | 45.0% |
| ! | CCTCCAATTTTCCCAAAAGG+AGG | - | Chr1:80304216-80304235 | MsG0180004610.01.T01:intron | 45.0% |
| ! | GGTCCTCCAATTTTCCCAAA+AGG | - | Chr1:80304213-80304232 | MsG0180004610.01.T01:intron | 45.0% |
| ! | TTTGGGGTTTCTTCCAAGGA+AGG | + | Chr1:80303918-80303937 | None:intergenic | 45.0% |
| !! | ACTCATTGACTCTCTAGGTG+TGG | - | Chr1:80303781-80303800 | MsG0180004610.01.T01:intron | 45.0% |
| !! | CCTCCTTTTGGGAAAATTGG+AGG | + | Chr1:80304219-80304238 | None:intergenic | 45.0% |
| !! | GCCAAGAGTACCATAACTCA+GGG | + | Chr1:80303628-80303647 | None:intergenic | 45.0% |
| !! | TGATGTCTTGTGCTGCTTCT+TGG | + | Chr1:80304686-80304705 | None:intergenic | 45.0% |
| !! | CAAAATTTATAAAAATAAAA+AGG | - | Chr1:80304411-80304430 | MsG0180004610.01.T01:CDS | 5.0% |
| !!! | CTTTTTATTTTTATAAATTT+TGG | + | Chr1:80304413-80304432 | None:intergenic | 5.0% |
| ACAACCACTTCCTCCAAACC+TGG | + | Chr1:80304636-80304655 | None:intergenic | 50.0% | |
| ACCACTCCTACTTCACTCCA+TGG | + | Chr1:80304513-80304532 | None:intergenic | 50.0% | |
| ACCATGGAGTGAAGTAGGAG+TGG | - | Chr1:80304509-80304528 | MsG0180004610.01.T01:CDS | 50.0% | |
| ACTGGGAGCTAACATCACCA+TGG | - | Chr1:80304493-80304512 | MsG0180004610.01.T01:CDS | 50.0% | |
| AGAGAAAGGAGAAGGTCCAG+TGG | - | Chr1:80303583-80303602 | MsG0180004610.01.T01:CDS | 50.0% | |
| AGGAAGTGGTTGTGCAGGAA+GGG | - | Chr1:80304643-80304662 | MsG0180004610.01.T01:CDS | 50.0% | |
| CATGATTGGGGTGCGATCAT+CGG | - | Chr1:80303824-80303843 | MsG0180004610.01.T01:intron | 50.0% | |
| CTACGGTGAAACTGAAGCTC+CGG | - | Chr1:80303709-80303728 | MsG0180004610.01.T01:CDS | 50.0% | |
| GGTTTCTTCCAAGGAAGGGT+CGG | + | Chr1:80303913-80303932 | None:intergenic | 50.0% | |
| TACTCCAGCCAATTCGGCTT+CGG | + | Chr1:80304148-80304167 | None:intergenic | 50.0% | |
| TGATGTTAGCTCCCAGTTCC+TGG | + | Chr1:80304490-80304509 | None:intergenic | 50.0% | |
| TGCACGGTTTCCCTGAGTTA+TGG | - | Chr1:80303615-80303634 | MsG0180004610.01.T01:CDS | 50.0% | |
| TGGAAAAGCCGAAGCCGAAT+TGG | - | Chr1:80304137-80304156 | MsG0180004610.01.T01:intron | 50.0% | |
| TGTTCCAGGTTTGGAGGAAG+TGG | - | Chr1:80304629-80304648 | MsG0180004610.01.T01:CDS | 50.0% | |
| TTTGGAGGAAGTGGTTGTGC+AGG | - | Chr1:80304638-80304657 | MsG0180004610.01.T01:CDS | 50.0% | |
| ! | AATTCGGCTTCGGCTTTTCC+AGG | + | Chr1:80304138-80304157 | None:intergenic | 50.0% |
| ! | CCAAAAGGAGGGTATGGAAC+TGG | - | Chr1:80304228-80304247 | MsG0180004610.01.T01:intron | 50.0% |
| ! | CCAGTTCCATACCCTCCTTT+TGG | + | Chr1:80304231-80304250 | None:intergenic | 50.0% |
| !! | CCAGTGGTGTTGATGTTGCA+CGG | - | Chr1:80303599-80303618 | MsG0180004610.01.T01:CDS | 50.0% |
| !! | CGCCAAGAGTACCATAACTC+AGG | + | Chr1:80303629-80303648 | None:intergenic | 50.0% |
| !! | GTGTAGCTGGTCACTGATTC+CGG | + | Chr1:80303731-80303750 | None:intergenic | 50.0% |
| AAAGCCGAAGCCGAATTGGC+TGG | - | Chr1:80304141-80304160 | MsG0180004610.01.T01:intron | 55.0% | |
| AGGCCTTGACTCTTTCCGGT+CGG | + | Chr1:80303868-80303887 | None:intergenic | 55.0% | |
| ATTGGGGTGCGATCATCGGT+TGG | - | Chr1:80303828-80303847 | MsG0180004610.01.T01:intron | 55.0% | |
| CACCCCAATCATGTCCGACA+AGG | + | Chr1:80303817-80303836 | None:intergenic | 55.0% | |
| CCGTGCAACATCAACACCAC+TGG | + | Chr1:80303602-80303621 | None:intergenic | 55.0% | |
| CTCTTGGCGCCATCAGATTC+TGG | - | Chr1:80303640-80303659 | MsG0180004610.01.T01:CDS | 55.0% | |
| CTTCCAAGGAAGGGTCGGAA+TGG | + | Chr1:80303908-80303927 | None:intergenic | 55.0% | |
| GAAGCCGAATTGGCTGGAGT+AGG | - | Chr1:80304147-80304166 | MsG0180004610.01.T01:intron | 55.0% | |
| GAGGAAGTGGTTGTGCAGGA+AGG | - | Chr1:80304642-80304661 | MsG0180004610.01.T01:CDS | 55.0% | |
| GTTCCATTCCGACCCTTCCT+TGG | - | Chr1:80303902-80303921 | MsG0180004610.01.T01:CDS | 55.0% | |
| GTTCCGACCGGAAAGAGTCA+AGG | - | Chr1:80303862-80303881 | MsG0180004610.01.T01:intron | 55.0% | |
| ACCGTAGCCCCGAAGATCAG+GGG | + | Chr1:80303696-80303715 | None:intergenic | 60.0% | |
| CACCGTAGCCCCGAAGATCA+GGG | + | Chr1:80303697-80303716 | None:intergenic | 60.0% | |
| CTCCAAGGGTTACCGTGCAG+TGG | - | Chr1:80303670-80303689 | MsG0180004610.01.T01:CDS | 60.0% | |
| GAAGATCAGGGGCCACTGCA+CGG | + | Chr1:80303685-80303704 | None:intergenic | 60.0% | |
| GTGCAGTGGCCCCTGATCTT+CGG | - | Chr1:80303684-80303703 | MsG0180004610.01.T01:CDS | 60.0% | |
| TCACCGTAGCCCCGAAGATC+AGG | + | Chr1:80303698-80303717 | None:intergenic | 60.0% | |
| TGCAGTGGCCCCTGATCTTC+GGG | - | Chr1:80303685-80303704 | MsG0180004610.01.T01:CDS | 60.0% | |
| GCAGTGGCCCCTGATCTTCG+GGG | - | Chr1:80303686-80303705 | MsG0180004610.01.T01:CDS | 65.0% | |
| GCCCCTGATCTTCGGGGCTA+CGG | - | Chr1:80303692-80303711 | MsG0180004610.01.T01:CDS | 65.0% | |
| GGCCACTGCACGGTAACCCT+TGG | + | Chr1:80303675-80303694 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr1 | gene | 80303527 | 80304740 | 80303527 | ID=MsG0180004610.01;Name=MsG0180004610.01 |
| Chr1 | mRNA | 80303527 | 80304740 | 80303527 | ID=MsG0180004610.01.T01;Parent=MsG0180004610.01;Name=MsG0180004610.01.T01;_AED=0.46;_eAED=0.46;_QI=0|0|0|1|1|1|3|0|322 |
| Chr1 | exon | 80304267 | 80304740 | 80304267 | ID=MsG0180004610.01.T01:exon:13359;Parent=MsG0180004610.01.T01 |
| Chr1 | exon | 80303891 | 80304135 | 80303891 | ID=MsG0180004610.01.T01:exon:13358;Parent=MsG0180004610.01.T01 |
| Chr1 | exon | 80303527 | 80303776 | 80303527 | ID=MsG0180004610.01.T01:exon:13357;Parent=MsG0180004610.01.T01 |
| Chr1 | CDS | 80304267 | 80304740 | 80304267 | ID=MsG0180004610.01.T01:cds;Parent=MsG0180004610.01.T01 |
| Chr1 | CDS | 80303891 | 80304135 | 80303891 | ID=MsG0180004610.01.T01:cds;Parent=MsG0180004610.01.T01 |
| Chr1 | CDS | 80303527 | 80303776 | 80303527 | ID=MsG0180004610.01.T01:cds;Parent=MsG0180004610.01.T01 |
| Gene Sequence |
| Protein sequence |
