Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480019167.01.T01 | XP_003605138.1 | 99.773 | 440 | 1 | 0 | 1 | 440 | 1 | 440 | 0 | 907 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480019167.01.T01 | O81312 | 86.667 | 435 | 51 | 4 | 4 | 438 | 1 | 428 | 0 | 770 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480019167.01.T01 | G7JEN3 | 99.773 | 440 | 1 | 0 | 1 | 440 | 1 | 440 | 0.0 | 907 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0180000400.01 | MsG0480019167.01 | -0.835530 | 1.590448e-56 | 1.950149e-53 |
| MsG0180001315.01 | MsG0480019167.01 | 0.803379 | 3.585750e-49 | 1.799131e-46 |
| MsG0180001799.01 | MsG0480019167.01 | 0.802200 | 6.281516e-49 | 3.058217e-46 |
| MsG0180003725.01 | MsG0480019167.01 | 0.803608 | 3.214475e-49 | 1.622433e-46 |
| MsG0180006243.01 | MsG0480019167.01 | 0.828385 | 9.258066e-55 | 9.188412e-52 |
| MsG0280010976.01 | MsG0480019167.01 | 0.819184 | 1.327251e-52 | 1.014136e-49 |
| MsG0480018479.01 | MsG0480019167.01 | 0.824814 | 6.584001e-54 | 5.895792e-51 |
| MsG0480019167.01 | MsG0580025903.01 | 0.811240 | 7.728595e-51 | 4.759055e-48 |
| MsG0480019167.01 | MsG0580026460.01 | 0.849476 | 3.155673e-60 | 5.989149e-57 |
| MsG0480019167.01 | MsG0680034235.01 | 0.827000 | 1.992132e-54 | 1.898710e-51 |
| MsG0480019167.01 | MsG0780036845.01 | 0.818592 | 1.809104e-52 | 1.359875e-49 |
| MsG0480019167.01 | MsG0780039579.01 | 0.807804 | 4.225674e-50 | 2.376173e-47 |
| MsG0480019167.01 | MsG0780041482.01 | 0.825886 | 3.669667e-54 | 3.388033e-51 |
| MsG0480019167.01 | MsG0880042206.01 | 0.818915 | 1.527461e-52 | 1.158640e-49 |
| MsG0480019167.01 | MsG0880046684.01 | 0.833165 | 6.238153e-56 | 7.125617e-53 |
| MsG0480019167.01 | MsG0880046901.01 | 0.804015 | 2.646073e-49 | 1.349602e-46 |
| MsG0380016187.01 | MsG0480019167.01 | 0.801303 | 9.595635e-49 | 4.566985e-46 |
| MsG0380016802.01 | MsG0480019167.01 | 0.801414 | 9.107663e-49 | 4.346743e-46 |
| MsG0380017401.01 | MsG0480019167.01 | 0.840851 | 6.777259e-58 | 9.778442e-55 |
| MsG0280008738.01 | MsG0480019167.01 | 0.819434 | 1.163730e-52 | 8.954312e-50 |
PPI
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480019167.01.T01 | MTR_4g024600 | 99.773 | 440 | 1 | 0 | 1 | 440 | 1 | 440 | 0.0 | 907 |
| MsG0480019167.01.T01 | MTR_0354s0040 | 82.629 | 426 | 66 | 3 | 15 | 440 | 4 | 421 | 0.0 | 728 |
| MsG0480019167.01.T01 | MTR_4g102270 | 69.431 | 422 | 125 | 3 | 11 | 432 | 7 | 424 | 0.0 | 603 |
| MsG0480019167.01.T01 | MTR_4g129820 | 67.431 | 436 | 132 | 4 | 8 | 440 | 6 | 434 | 0.0 | 593 |
| MsG0480019167.01.T01 | MTR_3g084090 | 66.047 | 430 | 134 | 3 | 13 | 432 | 3 | 430 | 0.0 | 585 |
| MsG0480019167.01.T01 | MTR_5g011940 | 76.294 | 367 | 85 | 1 | 69 | 433 | 56 | 422 | 0.0 | 581 |
| MsG0480019167.01.T01 | MTR_0034s0060 | 27.545 | 334 | 213 | 8 | 102 | 428 | 138 | 449 | 9.22e-22 | 98.6 |
| MsG0480019167.01.T01 | MTR_8g096880 | 28.614 | 332 | 199 | 12 | 103 | 412 | 8 | 323 | 1.47e-21 | 95.9 |
| MsG0480019167.01.T01 | MTR_8g096880 | 29.042 | 334 | 195 | 13 | 103 | 412 | 8 | 323 | 2.10e-21 | 94.7 |
| MsG0480019167.01.T01 | MTR_2g073240 | 26.822 | 343 | 208 | 8 | 102 | 430 | 20 | 333 | 2.65e-20 | 94.0 |
| MsG0480019167.01.T01 | MTR_2g032100 | 26.087 | 345 | 219 | 12 | 103 | 427 | 73 | 401 | 2.67e-20 | 92.8 |
| MsG0480019167.01.T01 | MTR_5g009170 | 26.039 | 361 | 230 | 12 | 91 | 433 | 38 | 379 | 3.41e-20 | 92.4 |
| MsG0480019167.01.T01 | MTR_8g099535 | 27.576 | 330 | 205 | 12 | 102 | 412 | 5 | 319 | 7.98e-20 | 90.9 |
| MsG0480019167.01.T01 | MTR_1g009600 | 25.519 | 337 | 220 | 10 | 102 | 430 | 6 | 319 | 3.20e-19 | 90.9 |
| MsG0480019167.01.T01 | MTR_4g120030 | 25.397 | 441 | 251 | 17 | 8 | 425 | 20 | 405 | 6.59e-19 | 89.0 |
| MsG0480019167.01.T01 | MTR_5g009160 | 26.923 | 338 | 203 | 11 | 99 | 412 | 2 | 319 | 1.08e-18 | 87.4 |
| MsG0480019167.01.T01 | MTR_1g088480 | 25.816 | 337 | 202 | 12 | 98 | 425 | 115 | 412 | 1.21e-18 | 88.2 |
| MsG0480019167.01.T01 | MTR_8g089180 | 25.143 | 350 | 226 | 11 | 103 | 432 | 73 | 406 | 1.38e-17 | 84.7 |
| MsG0480019167.01.T01 | MTR_8g089180 | 25.143 | 350 | 226 | 11 | 103 | 432 | 73 | 406 | 1.38e-17 | 84.7 |
| MsG0480019167.01.T01 | MTR_4g063600 | 24.471 | 331 | 212 | 11 | 98 | 421 | 29 | 328 | 2.93e-17 | 83.2 |
| MsG0480019167.01.T01 | MTR_8g096880 | 28.041 | 296 | 176 | 11 | 103 | 376 | 8 | 288 | 8.44e-17 | 81.3 |
| MsG0480019167.01.T01 | MTR_4g063600 | 24.773 | 331 | 208 | 12 | 98 | 421 | 29 | 325 | 2.92e-16 | 80.1 |
| MsG0480019167.01.T01 | MTR_7g115080 | 25.000 | 336 | 210 | 13 | 103 | 427 | 31 | 335 | 2.50e-15 | 77.8 |
| MsG0480019167.01.T01 | MTR_7g115080 | 25.000 | 336 | 210 | 13 | 103 | 427 | 65 | 369 | 2.66e-15 | 77.8 |
| MsG0480019167.01.T01 | MTR_7g115080 | 25.000 | 336 | 210 | 13 | 103 | 427 | 44 | 348 | 2.71e-15 | 77.8 |
| MsG0480019167.01.T01 | MTR_1g080950 | 23.810 | 399 | 247 | 16 | 41 | 427 | 18 | 371 | 4.48e-15 | 77.0 |
| MsG0480019167.01.T01 | MTR_2g032100 | 29.630 | 189 | 127 | 5 | 103 | 288 | 73 | 258 | 6.28e-15 | 75.5 |
| MsG0480019167.01.T01 | MTR_1g080950 | 24.189 | 339 | 214 | 12 | 101 | 427 | 28 | 335 | 8.12e-15 | 76.3 |
| MsG0480019167.01.T01 | MTR_2g096660 | 24.324 | 333 | 210 | 12 | 98 | 421 | 35 | 334 | 1.68e-14 | 75.1 |
| MsG0480019167.01.T01 | MTR_4g101940 | 86.667 | 30 | 4 | 0 | 173 | 202 | 42 | 71 | 2.72e-12 | 62.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480019167.01.T01 | AT4G00110 | 86.667 | 435 | 51 | 4 | 4 | 438 | 1 | 428 | 0.0 | 770 |
| MsG0480019167.01.T01 | AT1G02000 | 84.828 | 435 | 59 | 5 | 7 | 439 | 1 | 430 | 0.0 | 751 |
| MsG0480019167.01.T01 | AT2G45310 | 78.851 | 435 | 88 | 3 | 7 | 438 | 1 | 434 | 0.0 | 693 |
| MsG0480019167.01.T01 | AT4G12250 | 73.059 | 438 | 105 | 4 | 7 | 437 | 1 | 432 | 0.0 | 621 |
| MsG0480019167.01.T01 | AT3G23820 | 77.557 | 352 | 79 | 0 | 81 | 432 | 92 | 443 | 0.0 | 582 |
| MsG0480019167.01.T01 | AT4G30440 | 67.907 | 430 | 126 | 4 | 11 | 438 | 6 | 425 | 0.0 | 564 |
| MsG0480019167.01.T01 | AT4G23920 | 27.350 | 351 | 215 | 12 | 102 | 430 | 4 | 336 | 4.23e-23 | 100 |
| MsG0480019167.01.T01 | AT1G12780 | 28.657 | 335 | 197 | 13 | 102 | 412 | 8 | 324 | 1.11e-22 | 99.0 |
| MsG0480019167.01.T01 | AT1G63180 | 28.443 | 334 | 199 | 12 | 102 | 412 | 8 | 324 | 5.12e-21 | 94.4 |
| MsG0480019167.01.T01 | AT1G78570 | 26.647 | 334 | 216 | 8 | 102 | 428 | 8 | 319 | 8.90e-21 | 95.5 |
| MsG0480019167.01.T01 | AT3G14790 | 26.647 | 334 | 216 | 8 | 102 | 428 | 11 | 322 | 2.29e-20 | 94.4 |
| MsG0480019167.01.T01 | AT3G14790 | 26.647 | 334 | 216 | 8 | 102 | 428 | 8 | 319 | 2.57e-20 | 94.4 |
| MsG0480019167.01.T01 | AT4G10960 | 26.891 | 357 | 209 | 13 | 102 | 430 | 5 | 337 | 7.81e-20 | 90.9 |
| MsG0480019167.01.T01 | AT1G30620 | 25.507 | 345 | 221 | 11 | 103 | 427 | 72 | 400 | 4.13e-19 | 89.4 |
| MsG0480019167.01.T01 | AT1G30620 | 25.507 | 345 | 221 | 11 | 103 | 427 | 73 | 401 | 4.52e-19 | 89.4 |
| MsG0480019167.01.T01 | AT1G30620 | 25.507 | 345 | 221 | 11 | 103 | 427 | 73 | 401 | 4.52e-19 | 89.4 |
| MsG0480019167.01.T01 | AT1G30620 | 25.507 | 345 | 221 | 11 | 103 | 427 | 73 | 401 | 4.52e-19 | 89.4 |
| MsG0480019167.01.T01 | AT1G30620 | 25.507 | 345 | 221 | 11 | 103 | 427 | 73 | 401 | 4.52e-19 | 89.4 |
| MsG0480019167.01.T01 | AT1G53500 | 26.393 | 341 | 208 | 8 | 102 | 428 | 10 | 321 | 9.17e-19 | 89.4 |
| MsG0480019167.01.T01 | AT5G44480 | 24.709 | 344 | 225 | 10 | 103 | 427 | 73 | 401 | 1.81e-18 | 87.4 |
| MsG0480019167.01.T01 | AT5G44480 | 24.709 | 344 | 225 | 10 | 103 | 427 | 73 | 401 | 1.81e-18 | 87.4 |
| MsG0480019167.01.T01 | AT5G44480 | 24.709 | 344 | 225 | 10 | 103 | 427 | 73 | 401 | 1.81e-18 | 87.4 |
| MsG0480019167.01.T01 | AT5G44480 | 24.709 | 344 | 225 | 10 | 103 | 427 | 97 | 425 | 2.19e-18 | 87.4 |
| MsG0480019167.01.T01 | AT3G62830 | 25.507 | 345 | 200 | 12 | 98 | 426 | 116 | 419 | 8.28e-18 | 85.9 |
| MsG0480019167.01.T01 | AT3G62830 | 25.507 | 345 | 200 | 12 | 98 | 426 | 116 | 419 | 8.28e-18 | 85.9 |
| MsG0480019167.01.T01 | AT3G53520 | 25.294 | 340 | 215 | 10 | 98 | 430 | 117 | 424 | 1.41e-17 | 85.1 |
| MsG0480019167.01.T01 | AT1G64440 | 25.281 | 356 | 220 | 12 | 102 | 434 | 4 | 336 | 1.43e-17 | 84.0 |
| MsG0480019167.01.T01 | AT2G47650 | 24.122 | 427 | 252 | 16 | 32 | 426 | 35 | 421 | 4.00e-17 | 83.6 |
| MsG0480019167.01.T01 | AT4G20460 | 25.212 | 353 | 227 | 12 | 96 | 427 | 64 | 400 | 4.56e-17 | 83.2 |
| MsG0480019167.01.T01 | AT2G28760 | 25.225 | 333 | 207 | 13 | 98 | 421 | 28 | 327 | 6.41e-17 | 82.0 |
| MsG0480019167.01.T01 | AT2G28760 | 25.225 | 333 | 207 | 13 | 98 | 421 | 28 | 327 | 6.41e-17 | 82.0 |
| MsG0480019167.01.T01 | AT2G28760 | 25.225 | 333 | 207 | 13 | 98 | 421 | 28 | 327 | 6.41e-17 | 82.0 |
| MsG0480019167.01.T01 | AT2G28760 | 25.225 | 333 | 207 | 13 | 98 | 421 | 59 | 358 | 8.40e-17 | 82.0 |
| MsG0480019167.01.T01 | AT1G63180 | 28.188 | 298 | 175 | 11 | 102 | 376 | 8 | 289 | 9.34e-17 | 81.3 |
| MsG0480019167.01.T01 | AT3G53520 | 25.000 | 340 | 214 | 11 | 98 | 430 | 117 | 422 | 1.73e-15 | 78.6 |
| MsG0480019167.01.T01 | AT2G47650 | 24.249 | 433 | 250 | 18 | 32 | 426 | 35 | 427 | 4.00e-15 | 77.4 |
| MsG0480019167.01.T01 | AT5G59290 | 24.085 | 328 | 207 | 12 | 103 | 421 | 47 | 341 | 7.61e-15 | 76.3 |
| MsG0480019167.01.T01 | AT5G59290 | 24.085 | 328 | 207 | 12 | 103 | 421 | 32 | 326 | 8.43e-15 | 75.9 |
| MsG0480019167.01.T01 | AT5G59290 | 24.085 | 328 | 207 | 12 | 103 | 421 | 3 | 297 | 9.26e-15 | 75.5 |
| MsG0480019167.01.T01 | AT5G59290 | 24.085 | 328 | 207 | 12 | 103 | 421 | 25 | 319 | 1.04e-14 | 75.5 |
| MsG0480019167.01.T01 | AT3G46440 | 23.353 | 334 | 214 | 12 | 97 | 421 | 25 | 325 | 1.25e-14 | 75.1 |
| MsG0480019167.01.T01 | AT3G46440 | 23.353 | 334 | 214 | 12 | 97 | 421 | 25 | 325 | 1.25e-14 | 75.1 |
| MsG0480019167.01.T01 | AT3G53520 | 27.083 | 240 | 153 | 6 | 98 | 331 | 117 | 340 | 2.61e-14 | 74.3 |
| MsG0480019167.01.T01 | AT3G53520 | 24.011 | 354 | 225 | 12 | 98 | 430 | 117 | 447 | 3.57e-14 | 74.7 |
| MsG0480019167.01.T01 | AT1G30620 | 27.128 | 188 | 133 | 3 | 103 | 288 | 73 | 258 | 1.38e-13 | 71.6 |
Find 116 sgRNAs with CRISPR-Local
Find 145 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTAGTTCTAGTTCTGTTTA+TGG | 0.169613 | 4:-15327244 | MsG0480019167.01.T01:CDS |
| GTTCTATCCCTTTCAGAAAA+AGG | 0.194999 | 4:+15327205 | None:intergenic |
| ATCTATGGTCTTTCTTTAAC+TGG | 0.228130 | 4:-15327112 | MsG0480019167.01.T01:CDS |
| ATCCTCAACCTTCAATTGTT+TGG | 0.242672 | 4:-15327267 | MsG0480019167.01.T01:CDS |
| CTCCGGCGAAGCTTTGTCTT+TGG | 0.247408 | 4:-15327807 | MsG0480019167.01.T01:CDS |
| TATCTGAATTACTATTCTTC+TGG | 0.256882 | 4:-15326635 | MsG0480019167.01.T01:CDS |
| TAGTGATCTTGTGGGTATTT+TGG | 0.296077 | 4:-15326816 | MsG0480019167.01.T01:CDS |
| TTCTCCATCTTGAACTTTCC+CGG | 0.301644 | 4:+15327865 | None:intergenic |
| TCCTCAACCTTCAATTGTTT+GGG | 0.302294 | 4:-15327266 | MsG0480019167.01.T01:CDS |
| TTTCACTGTTTATGGTCCTT+GGG | 0.318056 | 4:-15327080 | MsG0480019167.01.T01:CDS |
| AAATGCATGACATGAGTAAA+AGG | 0.326266 | 4:+15327394 | None:intergenic |
| TCCTTGGGGTAGGCCTGATA+TGG | 0.329537 | 4:-15327065 | MsG0480019167.01.T01:CDS |
| CAAACTGGGGTGGTCCCGTT+TGG | 0.334864 | 4:-15327684 | MsG0480019167.01.T01:CDS |
| GCGTGCAAGACAAGCACTTT+TGG | 0.348677 | 4:-15327491 | MsG0480019167.01.T01:CDS |
| GTCTTTCTTTAACTGGTTTG+AGG | 0.353381 | 4:-15327105 | MsG0480019167.01.T01:CDS |
| TATGTTCATAGTAACATTGC+TGG | 0.365279 | 4:-15327325 | MsG0480019167.01.T01:CDS |
| CATTGAGGAGTCCTTCAAAC+TGG | 0.372195 | 4:-15327699 | MsG0480019167.01.T01:CDS |
| CATACTTATAATCATATCTA+TGG | 0.374841 | 4:-15327127 | MsG0480019167.01.T01:CDS |
| CTCTTCCGGCGGACCCTTCA+CGG | 0.384471 | 4:-15327726 | MsG0480019167.01.T01:CDS |
| AAACTGGGGTGGTCCCGTTT+GGG | 0.395396 | 4:-15327683 | MsG0480019167.01.T01:CDS |
| TTATGAAGTTGCCGAGGAAT+GGG | 0.400306 | 4:-15326760 | MsG0480019167.01.T01:CDS |
| ATCTGAATTACTATTCTTCT+GGG | 0.411188 | 4:-15326634 | MsG0480019167.01.T01:CDS |
| CTGTTTATGGTCCTTGGGGT+AGG | 0.421551 | 4:-15327075 | MsG0480019167.01.T01:CDS |
| CTGGAAGTGGTGGGAAGAAG+AGG | 0.431142 | 4:-15326892 | MsG0480019167.01.T01:CDS |
| TCAATGATGCTGCTTTGTTA+AGG | 0.431669 | 4:-15327435 | MsG0480019167.01.T01:CDS |
| GTTCTTGTGACCGGAGCTGC+TGG | 0.437389 | 4:-15327610 | MsG0480019167.01.T01:CDS |
| TCCGGCGACTTCTCCTCTTC+CGG | 0.441112 | 4:-15327740 | MsG0480019167.01.T01:CDS |
| GGAGAGGCTGTTGAAGACTA+AGG | 0.452325 | 4:-15326795 | MsG0480019167.01.T01:CDS |
| TGTACGGTGGCACGCTTCTC+CGG | 0.452864 | 4:-15327824 | MsG0480019167.01.T01:CDS |
| GAACTAGCCCAAACAATTGA+AGG | 0.455646 | 4:+15327259 | None:intergenic |
| TGTCTTGCACGCTTCAAAGA+AGG | 0.457699 | 4:+15327502 | None:intergenic |
| GCGCTTAAACGCCGCGGAGA+TGG | 0.458617 | 4:-15327562 | MsG0480019167.01.T01:CDS |
| ATACCCACAAGATCACTAAC+AGG | 0.465851 | 4:+15326821 | None:intergenic |
| AACAGTGCTCCGTCGACGCC+GGG | 0.468408 | 4:-15327883 | MsG0480019167.01.T01:CDS |
| ATTATGAAGTTGCCGAGGAA+TGG | 0.468878 | 4:-15326761 | MsG0480019167.01.T01:CDS |
| ATGCATTTGGCTGCTCAAGC+TGG | 0.474694 | 4:-15327379 | MsG0480019167.01.T01:CDS |
| ACAAGATCACTAACAGGAAC+AGG | 0.475033 | 4:+15326827 | None:intergenic |
| CGTGAAGGGTCCGCCGGAAG+AGG | 0.475778 | 4:+15327727 | None:intergenic |
| TCCGACGAAACCAGCAGCTC+CGG | 0.477531 | 4:+15327600 | None:intergenic |
| GTTCCTGTTAGTGATCTTGT+GGG | 0.482574 | 4:-15326824 | MsG0480019167.01.T01:CDS |
| TGTTTATGGACTGAATACTA+AGG | 0.487187 | 4:-15327230 | MsG0480019167.01.T01:CDS |
| CGGAGAATCCGTTCCGTGAC+CGG | 0.489325 | 4:+15327632 | None:intergenic |
| TCCGTTCCTCCGCTAGAGTC+CGG | 0.497044 | 4:-15327651 | MsG0480019167.01.T01:CDS |
| CTCCAAAGACAAAGCTTCGC+CGG | 0.498173 | 4:+15327805 | None:intergenic |
| AGTTATGCGCAGAGAGAGCT+TGG | 0.500038 | 4:-15326710 | MsG0480019167.01.T01:CDS |
| CGGACACGTTTCTCCCAAAC+GGG | 0.500537 | 4:+15327670 | None:intergenic |
| GATACTGCTGAGAAGAGTAC+TGG | 0.501421 | 4:-15326911 | MsG0480019167.01.T01:CDS |
| CTTCTTACTTCAACCGTGTA+CGG | 0.502910 | 4:-15327840 | MsG0480019167.01.T01:CDS |
| ACGGGACCACCCCAGTTTGA+AGG | 0.504384 | 4:+15327688 | None:intergenic |
| GAGAGAGCTTGGTTATAAAC+CGG | 0.506070 | 4:-15326699 | MsG0480019167.01.T01:CDS |
| GGATTCTCCGTTCTTGTGAC+CGG | 0.510300 | 4:-15327619 | MsG0480019167.01.T01:CDS |
| TAAACCGGTGACGGATCTGC+AGG | 0.513367 | 4:-15326684 | MsG0480019167.01.T01:CDS |
| GACCGCCGTGAAGGGTCCGC+CGG | 0.515234 | 4:+15327721 | None:intergenic |
| TGTTCCTGTTAGTGATCTTG+TGG | 0.519953 | 4:-15326825 | MsG0480019167.01.T01:CDS |
| ACGGACACGTTTCTCCCAAA+CGG | 0.521018 | 4:+15327669 | None:intergenic |
| AGTATGCGCGATTTCTTCAC+CGG | 0.527758 | 4:+15327144 | None:intergenic |
| CTCCTCAATGACCGCCGTGA+AGG | 0.532413 | 4:+15327712 | None:intergenic |
| GCCCAAACAATTGAAGGTTG+AGG | 0.535698 | 4:+15327265 | None:intergenic |
| ACCGGAGCTGCTGGTTTCGT+CGG | 0.536422 | 4:-15327601 | MsG0480019167.01.T01:CDS |
| TGGAAGTGGTGGGAAGAAGA+GGG | 0.543352 | 4:-15326891 | MsG0480019167.01.T01:CDS |
| TTCACTGTTTATGGTCCTTG+GGG | 0.546844 | 4:-15327079 | MsG0480019167.01.T01:CDS |
| ACCCTTCACGGCGGTCATTG+AGG | 0.548511 | 4:-15327714 | MsG0480019167.01.T01:CDS |
| ATTGAGGAGTCCTTCAAACT+GGG | 0.549385 | 4:-15327698 | MsG0480019167.01.T01:CDS |
| TTATATTGATGATATTGTGA+GGG | 0.550359 | 4:-15326951 | MsG0480019167.01.T01:CDS |
| GAGGAGAAGTCGCCGGAGAA+CGG | 0.554120 | 4:+15327746 | None:intergenic |
| AACTGCACATCCCCATTCCT+CGG | 0.554769 | 4:+15326749 | None:intergenic |
| TCCTCAATGACCGCCGTGAA+GGG | 0.559853 | 4:+15327713 | None:intergenic |
| TAACAGTGCTCCGTCGACGC+CGG | 0.562127 | 4:-15327884 | MsG0480019167.01.T01:CDS |
| GTAGCGGCATACAAACTAGC+AGG | 0.564565 | 4:+15327175 | None:intergenic |
| TTGAACTTTCCCGGCGTCGA+CGG | 0.565515 | 4:+15327874 | None:intergenic |
| TTCACCGGCTTTCTTAGTAG+CGG | 0.567698 | 4:+15327159 | None:intergenic |
| GAGAAGCGTGCCACCGTACA+CGG | 0.567964 | 4:+15327827 | None:intergenic |
| AGCAGCTCCGGTCACAAGAA+CGG | 0.569637 | 4:+15327612 | None:intergenic |
| TTGAAAACCCTCAACTGCGC+CGG | 0.571733 | 4:+15326866 | None:intergenic |
| CCGGTGACGGATCTGCAGGC+TGG | 0.573224 | 4:-15326680 | MsG0480019167.01.T01:CDS |
| ACCGGACTCTAGCGGAGGAA+CGG | 0.574251 | 4:+15327650 | None:intergenic |
| CTTATATTGATGATATTGTG+AGG | 0.578974 | 4:-15326952 | MsG0480019167.01.T01:CDS |
| GAAGTGGTGGGAAGAAGAGG+GGG | 0.582983 | 4:-15326889 | MsG0480019167.01.T01:CDS |
| CGAATCATGGTACCGTTGCG+AGG | 0.585042 | 4:-15326982 | MsG0480019167.01.T01:CDS |
| AGCTGGTGTGAGGTATGCTA+TGG | 0.586552 | 4:-15327362 | MsG0480019167.01.T01:CDS |
| AGGTATGCTATGGAGAATCC+TGG | 0.586560 | 4:-15327352 | MsG0480019167.01.T01:CDS |
| CCAGCCTGCAGATCCGTCAC+CGG | 0.597830 | 4:+15326680 | None:intergenic |
| GGCGACTTCTCCTCTTCCGG+CGG | 0.605382 | 4:-15327737 | MsG0480019167.01.T01:CDS |
| GGAAGTGGTGGGAAGAAGAG+GGG | 0.607007 | 4:-15326890 | MsG0480019167.01.T01:CDS |
| CCTCCGCTAGAGTCCGGTCA+CGG | 0.608900 | 4:-15327645 | MsG0480019167.01.T01:CDS |
| TATGAAGTTGCCGAGGAATG+GGG | 0.609964 | 4:-15326759 | MsG0480019167.01.T01:CDS |
| GCTAGAGTCCGGTCACGGAA+CGG | 0.610673 | 4:-15327640 | MsG0480019167.01.T01:CDS |
| GAATCATGGTACCGTTGCGA+GGG | 0.611200 | 4:-15326981 | MsG0480019167.01.T01:CDS |
| GCCGGAAGAGGAGAAGTCGC+CGG | 0.613076 | 4:+15327739 | None:intergenic |
| TATGCCGCTACTAAGAAAGC+CGG | 0.617216 | 4:-15327163 | MsG0480019167.01.T01:CDS |
| GCTTGGTTATAAACCGGTGA+CGG | 0.619019 | 4:-15326693 | MsG0480019167.01.T01:CDS |
| GAGAAGAGTACTGGAAGTGG+TGG | 0.623154 | 4:-15326902 | MsG0480019167.01.T01:CDS |
| GTTTGAAGAAATTTGTGAGG+TGG | 0.624134 | 4:-15326658 | MsG0480019167.01.T01:CDS |
| TGGCTGCTCAAGCTGGTGTG+AGG | 0.625330 | 4:-15327372 | MsG0480019167.01.T01:CDS |
| GCCATATCAGGCCTACCCCA+AGG | 0.630669 | 4:+15327064 | None:intergenic |
| GCTGAGAAGAGTACTGGAAG+TGG | 0.633054 | 4:-15326905 | MsG0480019167.01.T01:CDS |
| GACGCCGGGAAAGTTCAAGA+TGG | 0.634115 | 4:-15327869 | MsG0480019167.01.T01:CDS |
| TCCGCGGCGCTTAAACGCCG+CGG | 0.635349 | 4:-15327568 | MsG0480019167.01.T01:CDS |
| TCCGCGGCGTTTAAGCGCCG+CGG | 0.637292 | 4:+15327567 | None:intergenic |
| CTGGTTTGAAGAAATTTGTG+AGG | 0.647230 | 4:-15326661 | MsG0480019167.01.T01:CDS |
| AGGAGTCCTTCAAACTGGGG+TGG | 0.647390 | 4:-15327694 | MsG0480019167.01.T01:CDS |
| ATAAGTAAAATCCCTCGCAA+CGG | 0.649166 | 4:+15326970 | None:intergenic |
| AGAAGAGTACTGGAAGTGGT+GGG | 0.649979 | 4:-15326901 | MsG0480019167.01.T01:CDS |
| GTTCCGTGACCGGACTCTAG+CGG | 0.650330 | 4:+15327642 | None:intergenic |
| GGAATATTATGAAGTTGCCG+AGG | 0.656687 | 4:-15326766 | MsG0480019167.01.T01:CDS |
| CTTACTTCAACCGTGTACGG+TGG | 0.659507 | 4:-15327837 | MsG0480019167.01.T01:CDS |
| CCGTGACCGGACTCTAGCGG+AGG | 0.659987 | 4:+15327645 | None:intergenic |
| TATATTGATGATATTGTGAG+GGG | 0.666488 | 4:-15326950 | MsG0480019167.01.T01:CDS |
| ATCACTAACAGGAACAGGCG+AGG | 0.666779 | 4:+15326832 | None:intergenic |
| TGTTGAAGACTAAGGCGAAG+AGG | 0.671437 | 4:-15326787 | MsG0480019167.01.T01:CDS |
| TTACTATGAACATAAGAACC+AGG | 0.683714 | 4:+15327334 | None:intergenic |
| TTGAGGAGTCCTTCAAACTG+GGG | 0.690015 | 4:-15327697 | MsG0480019167.01.T01:CDS |
| CGTCGGAACACATGTCTCCG+CGG | 0.690793 | 4:-15327584 | MsG0480019167.01.T01:CDS |
| TCCCTAAAACACCATCTCCG+CGG | 0.706963 | 4:+15327551 | None:intergenic |
| TTCCGGCGGACCCTTCACGG+CGG | 0.735183 | 4:-15327723 | MsG0480019167.01.T01:CDS |
| ATATTGATGATATTGTGAGG+GGG | 0.741076 | 4:-15326949 | MsG0480019167.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CATACTTATAATCATATCTA+TGG | - | Chr4:15327405-15327424 | MsG0480019167.01.T01:CDS | 20.0% |
| !!! | TTATATTGATGATATTGTGA+GGG | - | Chr4:15327581-15327600 | MsG0480019167.01.T01:CDS | 20.0% |
| ! | AAAAAGAAATAAGCCATATC+AGG | + | Chr4:15327483-15327502 | None:intergenic | 25.0% |
| ! | ATCTGAATTACTATTCTTCT+GGG | - | Chr4:15327898-15327917 | MsG0480019167.01.T01:CDS | 25.0% |
| ! | TATCTGAATTACTATTCTTC+TGG | - | Chr4:15327897-15327916 | MsG0480019167.01.T01:CDS | 25.0% |
| !! | CTTATATTGATGATATTGTG+AGG | - | Chr4:15327580-15327599 | MsG0480019167.01.T01:CDS | 25.0% |
| !! | TATATTGATGATATTGTGAG+GGG | - | Chr4:15327582-15327601 | MsG0480019167.01.T01:CDS | 25.0% |
| !!! | TTCACTAGAGATATTTTGAA+GGG | - | Chr4:15327501-15327520 | MsG0480019167.01.T01:CDS | 25.0% |
| !!! | TTTCACTAGAGATATTTTGA+AGG | - | Chr4:15327500-15327519 | MsG0480019167.01.T01:CDS | 25.0% |
| AAATGCATGACATGAGTAAA+AGG | + | Chr4:15327141-15327160 | None:intergenic | 30.0% | |
| ATCTATGGTCTTTCTTTAAC+TGG | - | Chr4:15327420-15327439 | MsG0480019167.01.T01:CDS | 30.0% | |
| TATGTTCATAGTAACATTGC+TGG | - | Chr4:15327207-15327226 | MsG0480019167.01.T01:CDS | 30.0% | |
| TTACTATGAACATAAGAACC+AGG | + | Chr4:15327201-15327220 | None:intergenic | 30.0% | |
| ! | ATATTGATGATATTGTGAGG+GGG | - | Chr4:15327583-15327602 | MsG0480019167.01.T01:CDS | 30.0% |
| ! | TGTTTATGGACTGAATACTA+AGG | - | Chr4:15327302-15327321 | MsG0480019167.01.T01:CDS | 30.0% |
| ! | TTGAGGTTTTTCACTGTTTA+TGG | - | Chr4:15327444-15327463 | MsG0480019167.01.T01:CDS | 30.0% |
| ! | TTTGTTAAGGAAGCTTTTTG+AGG | - | Chr4:15327110-15327129 | MsG0480019167.01.T01:CDS | 30.0% |
| ! | TTTTACTCATGTCATGCATT+TGG | - | Chr4:15327140-15327159 | MsG0480019167.01.T01:CDS | 30.0% |
| !! | TAAGGTTCCTTTTTCTGAAA+GGG | - | Chr4:15327320-15327339 | MsG0480019167.01.T01:CDS | 30.0% |
| !! | TCACTAGAGATATTTTGAAG+GGG | - | Chr4:15327502-15327521 | MsG0480019167.01.T01:CDS | 30.0% |
| !!! | GAAGACTATTCCTATTTTTG+AGG | - | Chr4:15327524-15327543 | MsG0480019167.01.T01:CDS | 30.0% |
| !!! | TGGTTTTGTTAATTTGCTTG+AGG | - | Chr4:15327227-15327246 | MsG0480019167.01.T01:CDS | 30.0% |
| ATAAGTAAAATCCCTCGCAA+CGG | + | Chr4:15327565-15327584 | None:intergenic | 35.0% | |
| ATCCTCAACCTTCAATTGTT+TGG | - | Chr4:15327265-15327284 | MsG0480019167.01.T01:CDS | 35.0% | |
| GTTCTATCCCTTTCAGAAAA+AGG | + | Chr4:15327330-15327349 | None:intergenic | 35.0% | |
| GTTTGAAGAAATTTGTGAGG+TGG | - | Chr4:15327874-15327893 | MsG0480019167.01.T01:CDS | 35.0% | |
| TCCTCAACCTTCAATTGTTT+GGG | - | Chr4:15327266-15327285 | MsG0480019167.01.T01:CDS | 35.0% | |
| TTTCACTGTTTATGGTCCTT+GGG | - | Chr4:15327452-15327471 | MsG0480019167.01.T01:CDS | 35.0% | |
| ! | ACTGGTGTTTTCATTGTTGA+AGG | - | Chr4:15327069-15327088 | MsG0480019167.01.T01:CDS | 35.0% |
| ! | AGTTGAGGGTTTTCAATTTG+GGG | - | Chr4:15327673-15327692 | MsG0480019167.01.T01:CDS | 35.0% |
| ! | CAGTTGAGGGTTTTCAATTT+GGG | - | Chr4:15327672-15327691 | MsG0480019167.01.T01:CDS | 35.0% |
| ! | CTAAGGTTCCTTTTTCTGAA+AGG | - | Chr4:15327319-15327338 | MsG0480019167.01.T01:CDS | 35.0% |
| ! | CTGGTTTGAAGAAATTTGTG+AGG | - | Chr4:15327871-15327890 | MsG0480019167.01.T01:CDS | 35.0% |
| ! | TAGTGATCTTGTGGGTATTT+TGG | - | Chr4:15327716-15327735 | MsG0480019167.01.T01:CDS | 35.0% |
| ! | TTTTCACTGTTTATGGTCCT+TGG | - | Chr4:15327451-15327470 | MsG0480019167.01.T01:CDS | 35.0% |
| !! | GCTAGTTCTAGTTCTGTTTA+TGG | - | Chr4:15327288-15327307 | MsG0480019167.01.T01:CDS | 35.0% |
| !! | GTCTTTCTTTAACTGGTTTG+AGG | - | Chr4:15327427-15327446 | MsG0480019167.01.T01:CDS | 35.0% |
| !! | TCAATGATGCTGCTTTGTTA+AGG | - | Chr4:15327097-15327116 | MsG0480019167.01.T01:CDS | 35.0% |
| !!! | GACTATTCCTATTTTTGAGG+CGG | - | Chr4:15327527-15327546 | MsG0480019167.01.T01:CDS | 35.0% |
| ACAAGATCACTAACAGGAAC+AGG | + | Chr4:15327708-15327727 | None:intergenic | 40.0% | |
| ATACCCACAAGATCACTAAC+AGG | + | Chr4:15327714-15327733 | None:intergenic | 40.0% | |
| ATTATGAAGTTGCCGAGGAA+TGG | - | Chr4:15327771-15327790 | MsG0480019167.01.T01:CDS | 40.0% | |
| ATTGAGGAGTCCTTCAAACT+GGG | - | Chr4:15326834-15326853 | MsG0480019167.01.T01:CDS | 40.0% | |
| CTTCTTACTTCAACCGTGTA+CGG | - | Chr4:15326692-15326711 | MsG0480019167.01.T01:CDS | 40.0% | |
| GAACTAGCCCAAACAATTGA+AGG | + | Chr4:15327276-15327295 | None:intergenic | 40.0% | |
| GAGAGAGCTTGGTTATAAAC+CGG | - | Chr4:15327833-15327852 | MsG0480019167.01.T01:CDS | 40.0% | |
| GGAATATTATGAAGTTGCCG+AGG | - | Chr4:15327766-15327785 | MsG0480019167.01.T01:CDS | 40.0% | |
| GTTCCTGTTAGTGATCTTGT+GGG | - | Chr4:15327708-15327727 | MsG0480019167.01.T01:CDS | 40.0% | |
| TGTTCCTGTTAGTGATCTTG+TGG | - | Chr4:15327707-15327726 | MsG0480019167.01.T01:CDS | 40.0% | |
| TTATGAAGTTGCCGAGGAAT+GGG | - | Chr4:15327772-15327791 | MsG0480019167.01.T01:CDS | 40.0% | |
| TTCACTGTTTATGGTCCTTG+GGG | - | Chr4:15327453-15327472 | MsG0480019167.01.T01:CDS | 40.0% | |
| TTCTCCATCTTGAACTTTCC+CGG | + | Chr4:15326670-15326689 | None:intergenic | 40.0% | |
| ! | GATCTTCTTTTTCCGTTCTC+CGG | - | Chr4:15326774-15326793 | MsG0480019167.01.T01:CDS | 40.0% |
| ! | GCAGTTGAGGGTTTTCAATT+TGG | - | Chr4:15327671-15327690 | MsG0480019167.01.T01:CDS | 40.0% |
| !! | ATCTTGTGGGTATTTTGGAG+AGG | - | Chr4:15327721-15327740 | MsG0480019167.01.T01:CDS | 40.0% |
| AGGTATGCTATGGAGAATCC+TGG | - | Chr4:15327180-15327199 | MsG0480019167.01.T01:CDS | 45.0% | |
| AGTATGCGCGATTTCTTCAC+CGG | + | Chr4:15327391-15327410 | None:intergenic | 45.0% | |
| CATTGAGGAGTCCTTCAAAC+TGG | - | Chr4:15326833-15326852 | MsG0480019167.01.T01:CDS | 45.0% | |
| GCCCAAACAATTGAAGGTTG+AGG | + | Chr4:15327270-15327289 | None:intergenic | 45.0% | |
| GCTTGGTTATAAACCGGTGA+CGG | - | Chr4:15327839-15327858 | MsG0480019167.01.T01:CDS | 45.0% | |
| TATGAAGTTGCCGAGGAATG+GGG | - | Chr4:15327773-15327792 | MsG0480019167.01.T01:CDS | 45.0% | |
| TATGCCGCTACTAAGAAAGC+CGG | - | Chr4:15327369-15327388 | MsG0480019167.01.T01:CDS | 45.0% | |
| TGATTCGCCGCCTCAAAAAT+AGG | + | Chr4:15327537-15327556 | None:intergenic | 45.0% | |
| TGTCTTGCACGCTTCAAAGA+AGG | + | Chr4:15327033-15327052 | None:intergenic | 45.0% | |
| TGTTGAAGACTAAGGCGAAG+AGG | - | Chr4:15327745-15327764 | MsG0480019167.01.T01:CDS | 45.0% | |
| TTGAGGAGTCCTTCAAACTG+GGG | - | Chr4:15326835-15326854 | MsG0480019167.01.T01:CDS | 45.0% | |
| ! | GATACTGCTGAGAAGAGTAC+TGG | - | Chr4:15327621-15327640 | MsG0480019167.01.T01:CDS | 45.0% |
| !! | AGAAGAGTACTGGAAGTGGT+GGG | - | Chr4:15327631-15327650 | MsG0480019167.01.T01:CDS | 45.0% |
| !! | GATATTGTGAGGGGGTGTTT+AGG | - | Chr4:15327591-15327610 | MsG0480019167.01.T01:CDS | 45.0% |
| !! | TTCACCGGCTTTCTTAGTAG+CGG | + | Chr4:15327376-15327395 | None:intergenic | 45.0% |
| !!! | ATTTTTGAGGCGGCGAATCA+TGG | - | Chr4:15327537-15327556 | MsG0480019167.01.T01:CDS | 45.0% |
| !!! | CAAGCACTTTTGGAACGTAC+TGG | - | Chr4:15327051-15327070 | MsG0480019167.01.T01:CDS | 45.0% |
| AACTGCACATCCCCATTCCT+CGG | + | Chr4:15327786-15327805 | None:intergenic | 50.0% | |
| ACGGACACGTTTCTCCCAAA+CGG | + | Chr4:15326866-15326885 | None:intergenic | 50.0% | |
| AGCTGGTGTGAGGTATGCTA+TGG | - | Chr4:15327170-15327189 | MsG0480019167.01.T01:CDS | 50.0% | |
| AGTTATGCGCAGAGAGAGCT+TGG | - | Chr4:15327822-15327841 | MsG0480019167.01.T01:CDS | 50.0% | |
| ATCACTAACAGGAACAGGCG+AGG | + | Chr4:15327703-15327722 | None:intergenic | 50.0% | |
| ATGCATTTGGCTGCTCAAGC+TGG | - | Chr4:15327153-15327172 | MsG0480019167.01.T01:CDS | 50.0% | |
| CTCCAAAGACAAAGCTTCGC+CGG | + | Chr4:15326730-15326749 | None:intergenic | 50.0% | |
| CTGTTTATGGTCCTTGGGGT+AGG | - | Chr4:15327457-15327476 | MsG0480019167.01.T01:CDS | 50.0% | |
| CTTACTTCAACCGTGTACGG+TGG | - | Chr4:15326695-15326714 | MsG0480019167.01.T01:CDS | 50.0% | |
| GAATCATGGTACCGTTGCGA+GGG | - | Chr4:15327551-15327570 | MsG0480019167.01.T01:CDS | 50.0% | |
| GGAGAGGCTGTTGAAGACTA+AGG | - | Chr4:15327737-15327756 | MsG0480019167.01.T01:CDS | 50.0% | |
| GGATTCTCCGTTCTTGTGAC+CGG | - | Chr4:15326913-15326932 | MsG0480019167.01.T01:CDS | 50.0% | |
| GTAGCGGCATACAAACTAGC+AGG | + | Chr4:15327360-15327379 | None:intergenic | 50.0% | |
| TCCCTAAAACACCATCTCCG+CGG | + | Chr4:15326984-15327003 | None:intergenic | 50.0% | |
| TTGAAAACCCTCAACTGCGC+CGG | + | Chr4:15327669-15327688 | None:intergenic | 50.0% | |
| ! | GCGTGCAAGACAAGCACTTT+TGG | - | Chr4:15327041-15327060 | MsG0480019167.01.T01:CDS | 50.0% |
| ! | TGGAAGTGGTGGGAAGAAGA+GGG | - | Chr4:15327641-15327660 | MsG0480019167.01.T01:CDS | 50.0% |
| !! | GAGAAGAGTACTGGAAGTGG+TGG | - | Chr4:15327630-15327649 | MsG0480019167.01.T01:CDS | 50.0% |
| !! | GCTGAGAAGAGTACTGGAAG+TGG | - | Chr4:15327627-15327646 | MsG0480019167.01.T01:CDS | 50.0% |
| AAACTGGGGTGGTCCCGTTT+GGG | - | Chr4:15326849-15326868 | MsG0480019167.01.T01:CDS | 55.0% | |
| AGCAGCTCCGGTCACAAGAA+CGG | + | Chr4:15326923-15326942 | None:intergenic | 55.0% | |
| AGGAGTCCTTCAAACTGGGG+TGG | - | Chr4:15326838-15326857 | MsG0480019167.01.T01:CDS | 55.0% | |
| CGAATCATGGTACCGTTGCG+AGG | - | Chr4:15327550-15327569 | MsG0480019167.01.T01:CDS | 55.0% | |
| CGGACACGTTTCTCCCAAAC+GGG | + | Chr4:15326865-15326884 | None:intergenic | 55.0% | |
| GACGCCGGGAAAGTTCAAGA+TGG | - | Chr4:15326663-15326682 | MsG0480019167.01.T01:CDS | 55.0% | |
| TCCTCAATGACCGCCGTGAA+GGG | + | Chr4:15326822-15326841 | None:intergenic | 55.0% | |
| TCCTTGGGGTAGGCCTGATA+TGG | - | Chr4:15327467-15327486 | MsG0480019167.01.T01:CDS | 55.0% | |
| ! | CTCCGGCGAAGCTTTGTCTT+TGG | - | Chr4:15326725-15326744 | MsG0480019167.01.T01:CDS | 55.0% |
| ! | CTGGAAGTGGTGGGAAGAAG+AGG | - | Chr4:15327640-15327659 | MsG0480019167.01.T01:CDS | 55.0% |
| ! | GAAGTGGTGGGAAGAAGAGG+GGG | - | Chr4:15327643-15327662 | MsG0480019167.01.T01:CDS | 55.0% |
| ! | GCCGCGGAGATGGTGTTTTA+GGG | - | Chr4:15326980-15326999 | MsG0480019167.01.T01:CDS | 55.0% |
| ! | GGAAGTGGTGGGAAGAAGAG+GGG | - | Chr4:15327642-15327661 | MsG0480019167.01.T01:CDS | 55.0% |
| ! | TTGAACTTTCCCGGCGTCGA+CGG | + | Chr4:15326661-15326680 | None:intergenic | 55.0% |
| !! | GAGGGGGTGTTTAGGTGCTT+TGG | - | Chr4:15327599-15327618 | MsG0480019167.01.T01:CDS | 55.0% |
| !! | TAAACCGGTGACGGATCTGC+AGG | - | Chr4:15327848-15327867 | MsG0480019167.01.T01:CDS | 55.0% |
| ACCCTTCACGGCGGTCATTG+AGG | - | Chr4:15326818-15326837 | MsG0480019167.01.T01:CDS | 60.0% | |
| ACCGGACTCTAGCGGAGGAA+CGG | + | Chr4:15326885-15326904 | None:intergenic | 60.0% | |
| ACGGGACCACCCCAGTTTGA+AGG | + | Chr4:15326847-15326866 | None:intergenic | 60.0% | |
| CAAACTGGGGTGGTCCCGTT+TGG | - | Chr4:15326848-15326867 | MsG0480019167.01.T01:CDS | 60.0% | |
| CGGAGAATCCGTTCCGTGAC+CGG | + | Chr4:15326903-15326922 | None:intergenic | 60.0% | |
| CGTCGGAACACATGTCTCCG+CGG | - | Chr4:15326948-15326967 | MsG0480019167.01.T01:CDS | 60.0% | |
| CTCCTCAATGACCGCCGTGA+AGG | + | Chr4:15326823-15326842 | None:intergenic | 60.0% | |
| GAGGAGAAGTCGCCGGAGAA+CGG | + | Chr4:15326789-15326808 | None:intergenic | 60.0% | |
| GCCATATCAGGCCTACCCCA+AGG | + | Chr4:15327471-15327490 | None:intergenic | 60.0% | |
| GCTAGAGTCCGGTCACGGAA+CGG | - | Chr4:15326892-15326911 | MsG0480019167.01.T01:CDS | 60.0% | |
| GTTCCGTGACCGGACTCTAG+CGG | + | Chr4:15326893-15326912 | None:intergenic | 60.0% | |
| GTTCTTGTGACCGGAGCTGC+TGG | - | Chr4:15326922-15326941 | MsG0480019167.01.T01:CDS | 60.0% | |
| TAACAGTGCTCCGTCGACGC+CGG | - | Chr4:15326648-15326667 | MsG0480019167.01.T01:CDS | 60.0% | |
| TCCGACGAAACCAGCAGCTC+CGG | + | Chr4:15326935-15326954 | None:intergenic | 60.0% | |
| TCCGGCGACTTCTCCTCTTC+CGG | - | Chr4:15326792-15326811 | MsG0480019167.01.T01:CDS | 60.0% | |
| TCCGTTCCTCCGCTAGAGTC+CGG | - | Chr4:15326881-15326900 | MsG0480019167.01.T01:CDS | 60.0% | |
| TGGCTGCTCAAGCTGGTGTG+AGG | - | Chr4:15327160-15327179 | MsG0480019167.01.T01:CDS | 60.0% | |
| TGTACGGTGGCACGCTTCTC+CGG | - | Chr4:15326708-15326727 | MsG0480019167.01.T01:CDS | 60.0% | |
| ! | CGCCGCGGAGATGGTGTTTT+AGG | - | Chr4:15326979-15326998 | MsG0480019167.01.T01:CDS | 60.0% |
| ! | GAGAAGCGTGCCACCGTACA+CGG | + | Chr4:15326708-15326727 | None:intergenic | 60.0% |
| !! | ACCGGAGCTGCTGGTTTCGT+CGG | - | Chr4:15326931-15326950 | MsG0480019167.01.T01:CDS | 60.0% |
| AACAGTGCTCCGTCGACGCC+GGG | - | Chr4:15326649-15326668 | MsG0480019167.01.T01:CDS | 65.0% | |
| CCAGCCTGCAGATCCGTCAC+CGG | + | Chr4:15327855-15327874 | None:intergenic | 65.0% | |
| CCTCCGCTAGAGTCCGGTCA+CGG | - | Chr4:15326887-15326906 | MsG0480019167.01.T01:CDS | 65.0% | |
| CTCTTCCGGCGGACCCTTCA+CGG | - | Chr4:15326806-15326825 | MsG0480019167.01.T01:CDS | 65.0% | |
| GCCGGAAGAGGAGAAGTCGC+CGG | + | Chr4:15326796-15326815 | None:intergenic | 65.0% | |
| GCGCTTAAACGCCGCGGAGA+TGG | - | Chr4:15326970-15326989 | MsG0480019167.01.T01:CDS | 65.0% | |
| GGCGACTTCTCCTCTTCCGG+CGG | - | Chr4:15326795-15326814 | MsG0480019167.01.T01:CDS | 65.0% | |
| TGGTGGGAAGAAGAGGGGGC+CGG | - | Chr4:15327647-15327666 | MsG0480019167.01.T01:CDS | 65.0% | |
| CCGTGACCGGACTCTAGCGG+AGG | + | Chr4:15326890-15326909 | None:intergenic | 70.0% | |
| CGTGAAGGGTCCGCCGGAAG+AGG | + | Chr4:15326808-15326827 | None:intergenic | 70.0% | |
| TCCGCGGCGCTTAAACGCCG+CGG | - | Chr4:15326964-15326983 | MsG0480019167.01.T01:CDS | 70.0% | |
| TTCCGGCGGACCCTTCACGG+CGG | - | Chr4:15326809-15326828 | MsG0480019167.01.T01:CDS | 70.0% | |
| ! | TCCGCGGCGTTTAAGCGCCG+CGG | + | Chr4:15326968-15326987 | None:intergenic | 70.0% |
| !! | CCGGTGACGGATCTGCAGGC+TGG | - | Chr4:15327852-15327871 | MsG0480019167.01.T01:CDS | 70.0% |
| AGAGGGGGCCGGCGCAGTTG+AGG | - | Chr4:15327658-15327677 | MsG0480019167.01.T01:CDS | 75.0% | |
| GACCGCCGTGAAGGGTCCGC+CGG | + | Chr4:15326814-15326833 | None:intergenic | 75.0% | |
| GAGGGGGCCGGCGCAGTTGA+GGG | - | Chr4:15327659-15327678 | MsG0480019167.01.T01:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr4 | gene | 15326616 | 15327938 | 15326616 | ID=MsG0480019167.01;Name=MsG0480019167.01 |
| Chr4 | mRNA | 15326616 | 15327938 | 15326616 | ID=MsG0480019167.01.T01;Parent=MsG0480019167.01;Name=MsG0480019167.01.T01;_AED=0.32;_eAED=0.32;_QI=0|-1|0|1|-1|1|1|0|440 |
| Chr4 | exon | 15326616 | 15327938 | 15326616 | ID=MsG0480019167.01.T01:exon:4116;Parent=MsG0480019167.01.T01 |
| Chr4 | CDS | 15326616 | 15327938 | 15326616 | ID=MsG0480019167.01.T01:cds;Parent=MsG0480019167.01.T01 |
| Gene Sequence |
| Protein sequence |
