AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0011700

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0011700 MtrunA17_Chr1g0160181 94.344 389 22 0 1 389 1 389 0.0 771
Msa0011700 MtrunA17_Chr3g0114701 68.785 362 108 1 10 366 1 362 7.01e-179 512
Msa0011700 MtrunA17_Chr1g0177221 79.775 267 51 1 1 267 1 264 5.62e-166 474
Msa0011700 MtrunA17_Chr3g0114731 52.073 386 174 5 14 395 14 392 1.38e-137 407
Msa0011700 MtrunA17_Chr3g0114711 49.479 384 154 5 17 363 13 393 4.32e-126 378
Msa0011700 MtrunA17_Chr1g0160171 51.497 334 159 3 7 340 5 335 3.51e-120 362
Msa0011700 MtrunA17_Chr3g0114691 49.394 330 166 1 12 341 14 342 1.15e-118 358
Msa0011700 MtrunA17_Chr7g0255561 47.788 339 168 3 8 341 4 338 4.52e-113 344
Msa0011700 MtrunA17_Chr7g0255581 47.788 339 168 3 8 341 4 338 4.52e-113 344
Msa0011700 MtrunA17_Chr7g0263101 46.313 339 172 3 4 339 1 332 9.76e-110 335
Msa0011700 MtrunA17_Chr1g0182291 46.364 330 171 2 13 341 10 334 6.79e-105 322
Msa0011700 MtrunA17_Chr8g0354121 41.039 385 205 6 14 391 9 378 2.42e-100 311
Msa0011700 MtrunA17_Chr3g0081511 41.299 385 213 6 11 393 10 383 2.39e-98 306
Msa0011700 MtrunA17_Chr3g0081421 43.769 329 177 4 16 339 15 340 3.25e-94 295
Msa0011700 MtrunA17_Chr1g0186601 41.846 325 181 4 14 336 12 330 4.84e-82 262
Msa0011700 MtrunA17_Chr1g0186641 41.846 325 179 4 15 336 10 327 9.10e-82 261
Msa0011700 MtrunA17_Chr1g0186611 40.240 333 175 3 14 336 12 330 1.98e-79 256
Msa0011700 MtrunA17_Chr1g0171301 40.683 322 174 3 24 336 19 332 2.14e-79 255
Msa0011700 MtrunA17_Chr1g0186571 42.462 325 177 5 15 336 10 327 4.60e-79 254
Msa0011700 MtrunA17_Chr1g0186561 40.854 328 173 4 18 336 16 331 9.59e-77 248
Msa0011700 MtrunA17_Chr1g0155761 37.467 379 206 5 23 375 26 399 4.97e-76 248
Msa0011700 MtrunA17_Chr3g0142131 40.176 341 170 6 23 341 25 353 2.43e-75 246
Msa0011700 MtrunA17_Chr1g0172881 78.102 137 20 1 131 267 23 149 7.29e-75 236
Msa0011700 MtrunA17_Chr1g0184221 41.562 320 160 7 34 336 32 341 3.25e-71 234
Msa0011700 MtrunA17_Chr6g0483401 39.130 322 185 3 27 342 19 335 2.82e-64 216
Msa0011700 MtrunA17_Chr6g0463971 36.103 349 195 6 1 339 6 336 7.68e-64 214
Msa0011700 MtrunA17_Chr3g0129601 37.117 326 201 3 18 341 29 352 8.11e-63 212
Msa0011700 MtrunA17_Chr3g0126101 38.387 310 185 4 33 342 21 324 8.12e-60 203
Msa0011700 MtrunA17_Chr2g0278561 34.021 388 239 6 21 403 18 393 1.99e-59 204
Msa0011700 MtrunA17_Chr8g0334761 37.846 325 178 6 26 339 18 329 7.52e-59 201
Msa0011700 MtrunA17_Chr4g0059311 37.874 301 178 4 42 339 36 330 1.20e-57 198
Msa0011700 MtrunA17_Chr7g0271561 35.714 336 186 5 21 339 10 332 1.42e-56 196
Msa0011700 MtrunA17_Chr8g0383731 38.095 336 190 7 15 340 3 330 5.73e-56 193
Msa0011700 MtrunA17_Chr2g0278551 32.041 387 253 6 21 405 15 393 7.05e-55 192
Msa0011700 MtrunA17_Chr2g0284261 36.364 330 193 6 18 341 8 326 3.26e-54 189
Msa0011700 MtrunA17_Chr1g0164831 36.304 303 183 5 41 340 26 321 4.33e-54 188
Msa0011700 MtrunA17_Chr2g0310441 36.503 326 191 5 21 339 13 329 8.08e-54 188
Msa0011700 MtrunA17_Chr5g0408001 34.091 352 209 6 12 348 8 351 9.10e-54 188
Msa0011700 MtrunA17_Chr3g0129571 33.046 348 213 6 20 362 9 341 4.94e-53 186
Msa0011700 MtrunA17_Chr5g0413961 36.452 310 176 8 40 342 36 331 1.37e-51 181
Msa0011700 MtrunA17_Chr5g0408031 34.473 351 203 6 18 348 10 353 2.52e-51 182
Msa0011700 MtrunA17_Chr2g0278541 32.727 385 243 6 18 391 12 391 3.38e-51 182
Msa0011700 MtrunA17_Chr1g0172891 73.636 110 23 1 273 382 12 115 4.87e-50 169
Msa0011700 MtrunA17_Chr5g0408041 34.582 347 200 6 18 344 11 350 2.04e-49 177
Msa0011700 MtrunA17_Chr4g0050881 37.700 313 170 9 40 340 31 330 2.53e-49 175
Msa0011700 MtrunA17_Chr1g0177231 76.923 104 18 1 268 371 29 126 7.06e-49 166
Msa0011700 MtrunA17_Chr2g0332001 33.663 303 192 3 42 341 62 358 1.16e-48 175
Msa0011700 MtrunA17_Chr2g0290611 34.441 331 196 5 21 341 15 334 9.97e-48 171
Msa0011700 MtrunA17_Chr3g0129591 35.976 328 197 6 20 339 7 329 1.01e-47 171
Msa0011700 MtrunA17_Chr8g0334771 38.608 316 188 4 26 339 18 329 1.34e-47 171
Msa0011700 MtrunA17_Chr7g0227921 33.893 298 191 5 43 339 36 328 1.62e-45 165
Msa0011700 MtrunA17_Chr8g0369841 30.481 374 231 7 26 379 17 381 2.13e-45 165
Msa0011700 MtrunA17_Chr8g0334751 38.988 336 182 8 16 339 6 330 4.58e-45 164
Msa0011700 MtrunA17_Chr5g0407971 32.267 344 206 6 18 342 11 346 4.74e-45 164
Msa0011700 MtrunA17_Chr5g0413941 33.660 306 184 6 44 341 33 327 7.12e-45 163
Msa0011700 MtrunA17_Chr5g0407991 32.132 333 199 6 31 344 22 346 2.43e-44 162
Msa0011700 MtrunA17_Chr1g0160111 32.558 301 196 4 44 339 33 331 4.22e-44 162
Msa0011700 MtrunA17_Chr4g0050941 36.937 333 197 7 18 341 12 340 1.50e-42 157
Msa0011700 MtrunA17_Chr4g0073241 29.491 373 242 8 21 387 11 368 4.36e-42 156
Msa0011700 MtrunA17_Chr5g0413951 33.224 304 184 6 44 339 33 325 1.50e-41 154
Msa0011700 MtrunA17_Chr5g0413921 32.308 325 197 8 40 354 29 340 1.71e-41 154
Msa0011700 MtrunA17_Chr6g0451201 34.062 320 179 11 33 339 25 325 3.64e-40 150
Msa0011700 MtrunA17_Chr5g0428881 30.746 335 216 5 13 339 13 339 3.54e-39 148
Msa0011700 MtrunA17_Chr4g0050891 35.314 303 182 7 40 334 35 331 3.73e-39 147
Msa0011700 MtrunA17_Chr6g0451261 30.068 296 192 7 31 320 24 310 7.07e-39 153
Msa0011700 MtrunA17_Chr4g0051021 30.982 326 200 6 40 351 36 350 1.24e-38 146
Msa0011700 MtrunA17_Chr3g0129581 33.434 332 200 5 20 339 7 329 1.62e-38 145
Msa0011700 MtrunA17_Chr6g0451171 32.219 329 209 7 28 351 22 341 1.44e-37 143
Msa0011700 MtrunA17_Chr1g0150151 32.075 318 204 6 30 341 23 334 1.75e-37 143
Msa0011700 MtrunA17_Chr5g0413931 32.468 308 181 11 44 339 32 324 4.46e-36 139
Msa0011700 MtrunA17_Chr5g0404811 33.796 216 134 3 131 342 6 216 1.81e-33 128
Msa0011700 MtrunA17_Chr4g0050931 30.909 330 181 5 18 341 12 300 3.06e-33 130
Msa0011700 MtrunA17_Chr6g0451251 32.131 305 186 6 43 339 37 328 4.38e-33 130
Msa0011700 MtrunA17_Chr6g0451211 29.393 313 208 6 33 339 25 330 7.89e-33 130
Msa0011700 MtrunA17_Chr2g0278021 31.390 223 145 4 193 415 67 281 1.12e-32 127
Msa0011700 MtrunA17_Chr5g0429001 25.212 353 211 7 76 411 9 325 9.92e-31 122
Msa0011700 MtrunA17_Chr3g0126091 28.213 319 209 8 30 338 23 331 4.69e-30 121
Msa0011700 MtrunA17_Chr6g0451191 34.123 211 131 4 143 351 12 216 6.83e-30 118
Msa0011700 MtrunA17_Chr1g0182261 42.336 137 77 2 207 341 76 212 3.62e-29 115
Msa0011700 MtrunA17_Chr5g0441761 29.642 307 188 9 48 343 42 331 7.11e-29 118
Msa0011700 MtrunA17_Chr3g0084091 31.128 257 158 6 101 351 13 256 5.34e-27 111
Msa0011700 MtrunA17_Chr1g0211801 31.797 217 138 4 40 253 33 242 4.74e-25 105
Msa0011700 MtrunA17_Chr8g0334711 39.500 200 107 5 21 214 13 204 2.96e-23 98.2
Msa0011700 MtrunA17_Chr8g0334721 43.636 110 61 1 230 339 1 109 7.05e-23 95.9
Msa0011700 MtrunA17_Chr5g0404801 46.226 106 57 0 26 131 15 120 5.95e-22 91.7
Msa0011700 MtrunA17_Chr4g0051001 29.433 282 187 6 42 317 55 330 8.59e-22 97.1
Msa0011700 MtrunA17_Chr4g0056081 28.529 340 199 11 23 339 19 337 1.41e-20 94.0
Msa0011700 MtrunA17_Chr5g0399281 28.972 321 203 11 40 348 30 337 1.73e-18 87.4
Msa0011700 MtrunA17_Chr6g0451241 43.284 67 36 1 287 351 27 93 3.00e-12 63.9
Msa0011700 MtrunA17_Chr1g0211811 37.079 89 54 1 269 355 1 89 1.33e-11 61.2
Msa0011700 MtrunA17_Chr8g0334731 34.752 141 76 3 82 214 56 188 1.47e-11 64.3
Msa0011700 MtrunA17_Chr4g0050911 39.759 83 49 1 103 185 16 97 3.74e-11 62.0
Msa0011700 MtrunA17_Chr2g0278031 42.553 94 44 2 40 128 36 124 4.02e-11 60.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0011700 AT4G08290.1 47.753 356 181 2 8 363 2 352 2.69e-124 373
Msa0011700 AT2G37460.1 42.092 392 191 4 17 397 13 379 4.50e-112 341
Msa0011700 AT1G44800.1 46.821 346 176 5 18 363 10 347 4.03e-110 336
Msa0011700 AT1G21890.1 44.501 391 198 6 16 396 7 388 3.37e-109 334
Msa0011700 AT2G39510.1 43.008 379 202 6 18 394 7 373 1.00e-108 332
Msa0011700 AT4G08300.1 46.064 343 174 6 23 363 15 348 1.34e-104 322
Msa0011700 AT5G07050.1 43.662 355 172 7 3 342 5 346 8.24e-99 308
Msa0011700 AT2G40900.1 42.588 371 201 5 16 383 8 369 8.85e-96 300
Msa0011700 AT1G21890.2 48.710 310 150 3 16 317 7 315 3.02e-93 291
Msa0011700 AT3G56620.1 44.548 321 171 2 16 336 8 321 5.48e-88 279
Msa0011700 AT4G08290.2 46.718 259 137 1 8 266 2 259 2.91e-86 271
Msa0011700 AT2G37450.2 43.119 327 147 4 20 339 10 304 1.63e-83 266
Msa0011700 AT1G75500.1 39.939 328 183 4 23 341 24 346 3.56e-75 246
Msa0011700 AT1G75500.2 39.939 328 183 4 23 341 24 346 3.56e-75 246
Msa0011700 AT5G13670.1 38.701 354 198 4 14 355 3 349 4.66e-74 243
Msa0011700 AT3G18200.2 38.806 335 194 6 23 353 39 366 1.21e-71 236
Msa0011700 AT2G37450.3 45.267 243 115 2 104 339 1 232 4.16e-65 215
Msa0011700 AT3G53210.1 37.349 332 196 3 17 343 8 332 2.30e-62 211
Msa0011700 AT4G30420.2 36.615 325 198 4 26 347 16 335 5.01e-57 197
Msa0011700 AT4G30420.1 36.615 325 198 4 26 347 6 325 2.28e-56 195
Msa0011700 AT5G64700.1 36.170 329 204 3 18 341 7 334 6.99e-55 191
Msa0011700 AT1G09380.1 34.675 323 200 5 20 336 9 326 1.85e-51 182
Msa0011700 AT2G37450.1 43.386 189 89 2 158 339 88 265 8.69e-51 178
Msa0011700 AT2G37450.1 51.923 52 25 0 20 71 10 61 1.51e-11 66.2
Msa0011700 AT1G01070.1 36.066 305 186 6 40 340 37 336 1.75e-50 179
Msa0011700 AT5G45370.2 34.663 326 196 6 30 341 31 353 1.00e-49 177
Msa0011700 AT5G45370.4 34.663 326 196 6 30 341 31 353 1.00e-49 177
Msa0011700 AT3G30340.1 33.231 325 207 6 41 361 33 351 2.51e-49 176
Msa0011700 AT5G45370.1 34.295 312 192 3 30 341 31 329 5.83e-49 175
Msa0011700 AT4G28040.1 33.742 326 200 4 18 341 7 318 4.20e-47 170
Msa0011700 AT4G28040.5 33.742 326 200 4 18 341 7 318 4.20e-47 170
Msa0011700 AT4G28040.3 33.742 326 200 4 18 341 7 318 4.20e-47 170
Msa0011700 AT4G28040.4 33.742 326 200 4 18 341 7 318 4.20e-47 170
Msa0011700 AT4G28040.2 33.742 326 200 4 18 341 7 318 4.20e-47 170
Msa0011700 AT3G53210.2 35.664 286 162 5 66 343 4 275 1.64e-45 164
Msa0011700 AT3G18200.1 39.004 241 136 6 117 353 3 236 7.07e-45 160
Msa0011700 AT3G28050.1 31.608 367 207 11 43 401 36 366 2.45e-44 162
Msa0011700 AT4G01430.1 32.827 329 183 8 40 351 30 337 3.03e-44 162
Msa0011700 AT1G11450.3 35.065 308 187 6 40 342 37 336 5.15e-44 161
Msa0011700 AT4G01440.1 33.546 313 183 6 40 341 31 329 1.52e-43 160
Msa0011700 AT3G45870.1 32.635 334 206 5 12 334 9 334 2.43e-43 160
Msa0011700 AT1G01070.2 35.357 280 172 6 65 340 15 289 7.23e-43 157
Msa0011700 AT1G11460.1 35.256 312 182 9 40 342 37 337 9.86e-42 154
Msa0011700 AT1G68170.2 31.790 324 217 4 26 347 20 341 2.36e-41 154
Msa0011700 AT1G68170.1 31.790 324 217 4 26 347 10 331 2.22e-40 151
Msa0011700 AT1G11450.5 34.915 295 179 6 53 342 6 292 2.69e-40 149
Msa0011700 AT4G19185.1 33.136 338 203 5 26 346 28 359 2.88e-40 152
Msa0011700 AT5G40240.2 31.915 329 193 10 43 354 58 372 3.43e-40 151
Msa0011700 AT5G40230.1 33.861 316 175 11 43 341 45 343 4.58e-40 150
Msa0011700 AT5G40240.1 31.915 329 193 10 43 354 44 358 6.65e-40 150
Msa0011700 AT5G40240.3 31.915 329 193 10 43 354 44 358 6.65e-40 150
Msa0011700 AT1G70260.1 30.159 315 197 4 40 340 33 338 9.78e-40 150
Msa0011700 AT1G11450.2 34.708 291 177 6 57 342 3 285 6.01e-39 145
Msa0011700 AT1G25270.1 34.795 342 188 8 18 342 2 325 1.55e-38 146
Msa0011700 AT1G43650.1 34.395 314 190 5 31 339 19 321 6.19e-38 144
Msa0011700 AT3G53210.3 35.686 255 152 3 17 266 8 255 1.68e-37 140
Msa0011700 AT3G28080.5 33.058 242 157 3 102 341 8 246 6.44e-37 139
Msa0011700 AT3G28080.7 33.058 242 157 3 102 341 8 246 6.44e-37 139
Msa0011700 AT3G28080.8 33.058 242 157 3 102 341 8 246 6.44e-37 139
Msa0011700 AT3G28080.6 33.058 242 157 3 102 341 8 246 6.44e-37 139
Msa0011700 AT3G28080.1 31.541 279 182 4 67 341 62 335 1.57e-36 140
Msa0011700 AT3G28070.2 32.510 243 159 3 101 341 7 246 2.12e-36 137
Msa0011700 AT3G28130.5 33.074 257 158 4 101 349 9 259 3.61e-36 137
Msa0011700 AT3G28130.1 33.074 257 158 4 101 349 9 259 3.61e-36 137
Msa0011700 AT4G01440.3 32.526 289 170 6 40 317 31 305 7.99e-36 137
Msa0011700 AT3G28080.2 33.058 242 157 3 102 341 89 327 1.20e-35 138
Msa0011700 AT3G28100.1 31.776 321 202 6 29 341 24 335 1.38e-35 137
Msa0011700 AT3G28130.2 29.683 347 194 7 29 349 23 345 2.15e-35 137
Msa0011700 AT3G28070.1 32.510 243 159 3 101 341 99 338 8.10e-35 135
Msa0011700 AT5G40210.1 31.595 326 182 11 28 342 22 317 3.26e-34 133
Msa0011700 AT3G45870.8 31.546 317 198 5 12 317 9 317 8.97e-34 132
Msa0011700 AT1G11450.4 33.922 283 174 6 40 317 37 311 1.56e-33 131
Msa0011700 AT5G45370.6 33.071 254 153 6 102 341 1 251 1.81e-32 127
Msa0011700 AT5G45370.5 33.071 254 153 6 102 341 1 251 1.81e-32 127
Msa0011700 AT4G01430.2 31.525 295 169 7 40 317 30 308 3.95e-32 127
Msa0011700 AT5G47470.2 31.325 332 186 8 26 339 65 372 5.81e-32 128
Msa0011700 AT5G64700.2 34.118 255 162 3 18 267 7 260 1.05e-31 124
Msa0011700 AT5G47470.3 31.325 332 186 8 26 339 65 372 1.59e-31 127
Msa0011700 AT4G01440.4 33.778 225 128 4 40 255 31 243 1.87e-31 124
Msa0011700 AT4G15540.1 32.416 327 188 9 43 359 41 344 2.51e-31 125
Msa0011700 AT4G15540.2 32.416 327 188 9 43 359 41 344 2.51e-31 125
Msa0011700 AT1G11450.1 33.865 251 153 6 97 342 2 244 6.87e-31 122
Msa0011700 AT4G19185.2 32.463 268 158 5 96 346 20 281 8.26e-31 123
Msa0011700 AT5G47470.1 31.548 336 178 9 27 339 38 344 1.37e-30 124
Msa0011700 AT3G30340.2 35.545 211 129 3 41 248 33 239 2.13e-30 121
Msa0011700 AT4G01450.4 36.199 221 124 6 40 255 31 239 6.04e-30 119
Msa0011700 AT4G01450.1 35.169 236 136 6 40 270 31 254 9.36e-30 120
Msa0011700 AT4G01450.2 36.199 221 124 6 40 255 31 239 4.02e-29 119
Msa0011700 AT3G45870.9 31.835 267 163 5 12 267 9 267 6.96e-28 114
Msa0011700 AT4G01450.3 38.220 191 102 5 40 225 31 210 3.37e-27 111
Msa0011700 AT3G28080.9 30.476 210 145 1 132 341 1 209 1.08e-26 109
Msa0011700 AT3G28130.3 31.100 209 140 2 144 349 13 220 1.38e-25 105
Msa0011700 AT3G28070.5 30.189 212 143 3 132 341 1 209 1.55e-25 105
Msa0011700 AT5G45370.3 34.272 213 123 6 143 341 84 293 3.07e-25 107
Msa0011700 AT3G45870.5 33.953 215 127 4 131 334 49 259 4.40e-25 106
Msa0011700 AT1G60050.1 29.582 311 194 8 40 334 34 335 1.15e-24 106
Msa0011700 AT4G01440.5 30.303 231 140 4 120 341 3 221 1.16e-24 103
Msa0011700 AT4G01440.2 30.303 231 140 4 120 341 3 221 1.16e-24 103
Msa0011700 AT3G28070.3 31.507 219 145 3 101 317 99 314 7.39e-24 103
Msa0011700 AT3G28080.4 29.583 240 114 3 102 341 8 192 8.97e-23 97.4
Msa0011700 AT3G28080.3 29.032 279 135 6 67 341 62 281 1.31e-22 99.4
Msa0011700 AT4G01430.3 30.144 209 114 6 147 339 1 193 1.79e-21 94.0
Msa0011700 AT3G28100.3 32.780 241 146 5 29 261 24 256 7.56e-20 90.5
Msa0011700 AT3G45870.2 36.364 143 89 2 192 334 43 183 1.21e-19 89.0
Msa0011700 AT4G24980.1 34.783 184 88 4 33 213 1 155 2.45e-19 89.0
Msa0011700 AT3G28130.4 28.906 256 136 5 29 261 23 255 4.73e-19 87.8
Msa0011700 AT1G43650.2 33.036 224 142 3 31 253 19 235 1.10e-18 87.0
Msa0011700 AT4G16620.1 26.647 334 167 6 44 339 37 330 2.65e-18 87.4
Msa0011700 AT3G28100.2 33.333 210 132 3 9 214 4 209 1.71e-16 80.1
Msa0011700 AT3G45870.6 32.323 198 119 4 131 317 49 242 3.18e-16 79.3
Msa0011700 AT3G45870.7 32.323 198 119 4 131 317 49 242 3.18e-16 79.3
Msa0011700 AT4G16620.4 27.372 274 122 5 104 340 1 234 5.44e-15 75.9
Msa0011700 AT4G16620.2 27.372 274 122 5 104 340 1 234 5.44e-15 75.9
Msa0011700 AT3G28130.6 30.366 191 97 3 29 201 23 195 1.87e-13 70.5

Find 98 sgRNAs with CRISPR-Local

Find 310 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCATCACTGACATCAATTT+TGG 0.080824 1_1:+17612280 None:intergenic
GCCACGTGGGTTTGCTTTAT+TGG 0.134936 1_1:-17613342 Msa0011700:CDS
AGGCTCTGTGATTAAAACTA+TGG 0.269345 1_1:-17612909 Msa0011700:CDS
GGAGGAGTGGTGGTGGTTAC+AGG 0.272404 1_1:-17612413 Msa0011700:CDS
CATCTTTCTTCAGGAAAATT+AGG 0.275519 1_1:-17614897 Msa0011700:intron
CACCCTGAAGCCTGGTCTTT+GGG 0.283408 1_1:-17613276 Msa0011700:CDS
ACACCCTGAAGCCTGGTCTT+TGG 0.306088 1_1:-17613277 Msa0011700:CDS
GCAGGAGAAGGAGGAGGAGG+AGG 0.315191 1_1:-17610131 Msa0011700:CDS
TTCCTTCTCATTGGTTGTGC+TGG 0.319294 1_1:-17613808 Msa0011700:CDS
GGTCCTGTTCTTCAAATTGC+TGG 0.331541 1_1:-17613910 Msa0011700:CDS
ATTGGAACGCATGAAAATTA+AGG 0.348093 1_1:-17614007 Msa0011700:CDS
GGTGCATTGTTCCTTCTCAT+TGG 0.354685 1_1:-17613817 Msa0011700:CDS
AGGCCCAAAGACCAGGCTTC+AGG 0.363730 1_1:+17613273 None:intergenic
GAAGCAGGAGAAGGAGGAGG+AGG 0.364066 1_1:-17610134 Msa0011700:CDS
CGCATGAAAATTAAGGAAAT+AGG 0.366459 1_1:-17614000 Msa0011700:CDS
CAGGACTGTACCTAGTTGTA+TGG 0.371213 1_1:-17612394 Msa0011700:CDS
TGAAGCCTGGTCTTTGGGCC+TGG 0.375975 1_1:-17613271 Msa0011700:CDS
CTTATCCTAAGTTTACAGTT+TGG 0.384578 1_1:-17615362 Msa0011700:CDS
ACTGGTTCACACTGGCTCCT+TGG 0.384619 1_1:-17613838 Msa0011700:CDS
GAAGGAGAAGCAGGAGAAGG+AGG 0.391837 1_1:-17610140 Msa0011700:CDS
AGTTTACAGTTTGGTTCAGC+TGG 0.393812 1_1:-17615353 Msa0011700:CDS
AGTGACTCATACCCTTGTTA+AGG 0.399888 1_1:+17615306 None:intergenic
GAAGGAGCAGCAGAAGGAGC+AGG 0.411952 1_1:-17610200 Msa0011700:CDS
GTAGTTGTTGGTGTCCTTGT+TGG 0.418519 1_1:+17612315 None:intergenic
TTTATGTACATCAGCATTGT+TGG 0.425034 1_1:-17612434 Msa0011700:intron
GCAGAAGGAGCAGGAGGAGA+AGG 0.429853 1_1:-17610191 Msa0011700:CDS
GCAGAAGGAGCAGGAGGAGA+AGG 0.429853 1_1:-17610236 Msa0011700:CDS
GGCCCAAAGACCAGGCTTCA+GGG 0.430969 1_1:+17613274 None:intergenic
GGAGGAGCAGCAGAAGGAGC+AGG 0.431095 1_1:-17610245 Msa0011700:CDS
GACCCAGCAATTTGAAGAAC+AGG 0.435401 1_1:+17613907 None:intergenic
TGGAATGTATGTTCTGACTA+TGG 0.441328 1_1:-17615333 Msa0011700:CDS
GTGACTCATACCCTTGTTAA+GGG 0.442207 1_1:+17615307 None:intergenic
GGATGCCAAGCCAAAGTGAT+TGG 0.443164 1_1:-17613979 Msa0011700:CDS
GGACAGTAATTGGTAGTTGT+TGG 0.445972 1_1:+17612303 None:intergenic
TCTTGGAGGTGCATTTCTAA+TGG 0.445996 1_1:-17613944 Msa0011700:CDS
AAATATCCGAACTGTCATCT+TGG 0.447695 1_1:+17614873 None:intergenic
GAATGGAATAATACCTTTCA+AGG 0.448107 1_1:+17615222 None:intergenic
GGAGCAGGAGAAGGAGAAGC+AGG 0.449437 1_1:-17610170 Msa0011700:CDS
GGAGAAGGAGAAGGAGAAGC+AGG 0.454625 1_1:-17610149 Msa0011700:CDS
GGAGAAGGAGAAGCAGGAGA+AGG 0.456668 1_1:-17610143 Msa0011700:CDS
GGAGAAGCAGGAGAAGGAGG+AGG 0.458646 1_1:-17610137 Msa0011700:CDS
TAGTTGTTGGTGTCCTTGTT+GGG 0.461873 1_1:+17612316 None:intergenic
GGAGAAGCAGGAGAAGGAGA+AGG 0.482742 1_1:-17610158 Msa0011700:CDS
AATATCCGAACTGTCATCTT+GGG 0.484399 1_1:+17614874 None:intergenic
CACCACTGTGCCAATCACTT+TGG 0.489666 1_1:+17613969 None:intergenic
GGCACAGTGGTGAGTCTTGG+AGG 0.489779 1_1:-17613958 Msa0011700:CDS
GTCCTGTTCTTCAAATTGCT+GGG 0.495700 1_1:-17613909 Msa0011700:CDS
GGAGCAGGAGGAGAAGGAGC+AGG 0.497753 1_1:-17610185 Msa0011700:CDS
GGAGGAGAAGGAGCAGGAGA+AGG 0.511114 1_1:-17610179 Msa0011700:CDS
TTGATTTGCCCCATACAACT+AGG 0.512014 1_1:+17612384 None:intergenic
AGCGCAAACACCCTGAAGCC+TGG 0.514435 1_1:-17613284 Msa0011700:CDS
CTGAACCAAACTGTAAACTT+AGG 0.516654 1_1:+17615357 None:intergenic
GAAGGAGGAGGAGCAGCAGA+AGG 0.519455 1_1:-17610251 Msa0011700:CDS
GGCTCTGTGATTAAAACTAT+GGG 0.522764 1_1:-17612908 Msa0011700:CDS
GGAGAAGGAGAAGCAGGAGA+AGG 0.525689 1_1:-17610164 Msa0011700:CDS
AGGACTGTACCTAGTTGTAT+GGG 0.528440 1_1:-17612393 Msa0011700:CDS
GAAGGAGCAGAAGAAGAAGA+AGG 0.528956 1_1:-17610218 Msa0011700:CDS
GTGGCTAGTGACATCTCTGC+TGG 0.530399 1_1:+17613360 None:intergenic
GAAGAAGAAGGAGCAGCAGA+AGG 0.532086 1_1:-17610206 Msa0011700:CDS
AAGCAAAGAGTCTAGAGTCC+AGG 0.532461 1_1:+17613253 None:intergenic
CTGTGCCAATCACTTTGGCT+TGG 0.533643 1_1:+17613974 None:intergenic
TATTGCAAGTACAAAGGTGA+TGG 0.540410 1_1:+17614602 None:intergenic
CATTGTTGGAGGAGTGGTGG+TGG 0.540667 1_1:-17612420 Msa0011700:CDS
ATGTACATCAGCATTGTTGG+AGG 0.542794 1_1:-17612431 Msa0011700:intron
GACTATGGATGCCCTTAACA+AGG 0.543038 1_1:-17615318 Msa0011700:CDS
ATTGGCACAGTGGTGAGTCT+TGG 0.544984 1_1:-17613961 Msa0011700:CDS
AGAGTCCAGGCCCAAAGACC+AGG 0.549201 1_1:+17613266 None:intergenic
TTAGGCCCAAGATGACAGTT+CGG 0.551486 1_1:-17614879 Msa0011700:CDS
TATGATTATAGTCACAGCCT+TGG 0.555490 1_1:-17612852 Msa0011700:CDS
TACAAAGGTGATGGAAGGTA+CGG 0.559640 1_1:+17614611 None:intergenic
CAGAGAAACTCCACCTCGGA+AGG 0.565135 1_1:-17612814 Msa0011700:intron
GTGACTATAATCATACGTAA+AGG 0.570581 1_1:+17612860 None:intergenic
GTATTATATTATACCTTCCG+AGG 0.573225 1_1:+17612801 None:intergenic
TTTGTGAGAAAGTTAGTGCA+TGG 0.575847 1_1:-17615409 Msa0011700:CDS
GGAGCAGCAGAAGGAGCAGG+AGG 0.575875 1_1:-17610197 Msa0011700:CDS
GGAGCAGCAGAAGGAGCAGG+AGG 0.587578 1_1:-17610242 Msa0011700:CDS
ACTCTTTGCTTCATTATATG+CGG 0.592629 1_1:-17613241 Msa0011700:intron
AGCCAGCACAACCAATGAGA+AGG 0.593965 1_1:+17613806 None:intergenic
TGAGAGGACAATACAAGCCA+AGG 0.601320 1_1:+17612835 None:intergenic
CATCAGCATTGTTGGAGGAG+TGG 0.613229 1_1:-17612426 Msa0011700:intron
AGCAAAGGGAGCAAGAGCAA+TGG 0.614349 1_1:+17615250 None:intergenic
CGAGGTGGAGTTTCTCTGAG+AGG 0.620845 1_1:+17612819 None:intergenic
GCAAGTACAAAGGTGATGGA+AGG 0.620947 1_1:+17614606 None:intergenic
AAGGAGCCAGTGTGAACCAG+TGG 0.625463 1_1:+17613840 None:intergenic
TTATATTATACCTTCCGAGG+TGG 0.635528 1_1:+17612804 None:intergenic
ATGATCCCACTGGTTCACAC+TGG 0.636386 1_1:-17613846 Msa0011700:CDS
TTTCTAATGGCACTATACAA+AGG 0.641074 1_1:-17613931 Msa0011700:CDS
CAGAGATGTCACTAGCCACG+TGG 0.644091 1_1:-17613356 Msa0011700:CDS
CAGCATTGTTGGAGGAGTGG+TGG 0.646899 1_1:-17612423 Msa0011700:CDS
AGCCAAAGTGATTGGCACAG+TGG 0.654154 1_1:-17613971 Msa0011700:CDS
CTCTCAGAGAAACTCCACCT+CGG 0.657780 1_1:-17612818 Msa0011700:CDS
ACTATGGATGCCCTTAACAA+GGG 0.663685 1_1:-17615317 Msa0011700:CDS
ACCAATAAAGCAAACCCACG+TGG 0.674234 1_1:+17613341 None:intergenic
AGGAGCCAGTGTGAACCAGT+GGG 0.676390 1_1:+17613841 None:intergenic
GAAAATGTGAATGATCCCAC+TGG 0.686110 1_1:-17613856 Msa0011700:CDS
GGACTGTACCTAGTTGTATG+GGG 0.701323 1_1:-17612392 Msa0011700:CDS
AGAGATGTCACTAGCCACGT+GGG 0.711420 1_1:-17613355 Msa0011700:CDS
TGAGAAGGAACAATGCACCA+AGG 0.724203 1_1:+17613821 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTTGACATTAAAAAAAAAAA+TGG - chr1_1:17610431-17610450 Msa0011700:CDS 10.0%
!! TATATATATATATATAGCTA+GGG + chr1_1:17611067-17611086 None:intergenic 10.0%
!! ATATATATATATATATAGCT+AGG + chr1_1:17611068-17611087 None:intergenic 10.0%
!! TGTAAAATTAGAAAAATATA+GGG + chr1_1:17611381-17611400 None:intergenic 10.0%
!! TTGTAAAATTAGAAAAATAT+AGG + chr1_1:17611382-17611401 None:intergenic 10.0%
!!! ATTTTTCTAATTTTACAAAT+TGG - chr1_1:17611384-17611403 Msa0011700:intron 10.0%
!!! CATAAATTTTAAAAAATACA+AGG + chr1_1:17611411-17611430 None:intergenic 10.0%
!! AAATATTGTAATTTATCTAA+CGG + chr1_1:17611830-17611849 None:intergenic 10.0%
!!! TTTCAAATGTTTTTTAAATA+CGG - chr1_1:17612077-17612096 Msa0011700:intron 10.0%
!! AAAAAATAAAAAATTGAGTT+GGG + chr1_1:17612472-17612491 None:intergenic 10.0%
!! TAAAAAATAAAAAATTGAGT+TGG + chr1_1:17612473-17612492 None:intergenic 10.0%
!!! AATTTTCTTTATACAATTTA+AGG + chr1_1:17613630-17613649 None:intergenic 10.0%
!! TGTATATTAAACTATTAATT+AGG - chr1_1:17613850-17613869 Msa0011700:CDS 10.0%
!! AACATTAATTTACTTAACAT+AGG + chr1_1:17610721-17610740 None:intergenic 15.0%
!!! CAAATTTTGAAAAAACTATA+AGG + chr1_1:17611349-17611368 None:intergenic 15.0%
!! ATCTTATATTAATCAACATA+GGG + chr1_1:17611470-17611489 None:intergenic 15.0%
!! TATCTTATATTAATCAACAT+AGG + chr1_1:17611471-17611490 None:intergenic 15.0%
!!! TTCAAATGTTTTTTAAATAC+GGG - chr1_1:17612078-17612097 Msa0011700:intron 15.0%
!!! TTTTTATTTTTTAAGAAGCT+AGG - chr1_1:17612480-17612499 Msa0011700:intron 15.0%
!!! TCATTAAAATCAAACATTTT+TGG - chr1_1:17613023-17613042 Msa0011700:intron 15.0%
!! AAAAAATTAACCAAGATAAA+AGG - chr1_1:17613663-17613682 Msa0011700:intron 15.0%
!! AAAAGGTTTGAAAAAAAAAT+CGG - chr1_1:17613680-17613699 Msa0011700:intron 15.0%
!! AATATTATGAGATAACATCA+TGG + chr1_1:17610495-17610514 None:intergenic 20.0%
!! AAAAATTATTGCAAGTACAA+AGG + chr1_1:17610925-17610944 None:intergenic 20.0%
!!! TTGTACTTGCAATAATTTTT+AGG - chr1_1:17610925-17610944 Msa0011700:intron 20.0%
!! CAACACTTAATTAATATCAT+TGG - chr1_1:17611144-17611163 Msa0011700:intron 20.0%
!! AAATGAACATCAAATACTAT+AGG - chr1_1:17611240-17611259 Msa0011700:intron 20.0%
!! AATGAACATCAAATACTATA+GGG - chr1_1:17611241-17611260 Msa0011700:intron 20.0%
!! TTACTTTCAAACTATCAAAT+TGG - chr1_1:17611322-17611341 Msa0011700:intron 20.0%
!!! TTTATTTTGTTTGAGTAGAT+TGG - chr1_1:17611493-17611512 Msa0011700:intron 20.0%
!!! TTGTTAAAAGTATAAGTTTG+TGG + chr1_1:17612035-17612054 None:intergenic 20.0%
!!! TTTCTTCTAATGTTTTATAC+AGG - chr1_1:17612552-17612571 Msa0011700:intron 20.0%
!!! TTCTTCTAATGTTTTATACA+GGG - chr1_1:17612553-17612572 Msa0011700:intron 20.0%
!!! ACAAATCCATTTTTCAAATT+TGG - chr1_1:17613430-17613449 Msa0011700:intron 20.0%
!! AATCATCCAAATTTGAAAAA+TGG + chr1_1:17613439-17613458 None:intergenic 20.0%
!!! TGGTTAATTTTTTCTTTTTC+TGG + chr1_1:17613656-17613675 None:intergenic 20.0%
!!! TTTTTTCAAACCTTTTATCT+TGG + chr1_1:17613676-17613695 None:intergenic 20.0%
!! AATTAATCAATCAAATTGCA+TGG - chr1_1:17613712-17613731 Msa0011700:intron 20.0%
!! TGGAGAAATTTAAATAGTAT+AGG - chr1_1:17613732-17613751 Msa0011700:intron 20.0%
!! AACTTAAAGATTACACAAAA+TGG - chr1_1:17614143-17614162 Msa0011700:intron 20.0%
!! ACTTAAAGATTACACAAAAT+GGG - chr1_1:17614144-17614163 Msa0011700:intron 20.0%
!!! AATAAGTTTTTACATCAAGA+GGG + chr1_1:17614467-17614486 None:intergenic 20.0%
!!! AAATAAGTTTTTACATCAAG+AGG + chr1_1:17614468-17614487 None:intergenic 20.0%
!!! TATGAGTCACTATATTTTTG+TGG - chr1_1:17610224-17610243 Msa0011700:CDS 25.0%
! GAGTGCTAAAAAAATCAATT+AGG - chr1_1:17610555-17610574 Msa0011700:CDS 25.0%
! AAAATCAATTAGGTTACTTG+TGG - chr1_1:17610565-17610584 Msa0011700:CDS 25.0%
! GATGAAGAAATACACAAATA+TGG + chr1_1:17610605-17610624 None:intergenic 25.0%
! GTAAGTTCACAAATACATAT+TGG - chr1_1:17611758-17611777 Msa0011700:intron 25.0%
!! TTTATCTAACGGTTTAAAAC+CGG + chr1_1:17611819-17611838 None:intergenic 25.0%
! ACATAAACTTCTATTGTTGA+AGG + chr1_1:17611899-17611918 None:intergenic 25.0%
!!! ATAATATGTGTTGACTTTTG+AGG - chr1_1:17611940-17611959 Msa0011700:intron 25.0%
! AACAATTTCTAATCAATTGC+AGG - chr1_1:17612115-17612134 Msa0011700:intron 25.0%
! CAATAATGAAATTGCTCTTT+AGG - chr1_1:17612314-17612333 Msa0011700:CDS 25.0%
!!! TTGATAGGTTATTGCTTTTT+AGG + chr1_1:17612416-17612435 None:intergenic 25.0%
! AAGCAATAACCTATCAATAA+TGG - chr1_1:17612419-17612438 Msa0011700:CDS 25.0%
! ACTTGTTTAATGTTGTAACT+TGG + chr1_1:17612507-17612526 None:intergenic 25.0%
!! GCAATTCAATTTTATGTTCA+AGG - chr1_1:17612589-17612608 Msa0011700:intron 25.0%
!! AAATAGTCAAATTAGTCTCA+TGG - chr1_1:17612785-17612804 Msa0011700:intron 25.0%
! GTACATAAAACAAATCAAAG+TGG + chr1_1:17613073-17613092 None:intergenic 25.0%
! TGATGATAATAAACCTCAAT+TGG - chr1_1:17613254-17613273 Msa0011700:CDS 25.0%
!! ATCTTTAAGTTTGCTTACTA+GGG + chr1_1:17614134-17614153 None:intergenic 25.0%
!! AATCTTTAAGTTTGCTTACT+AGG + chr1_1:17614135-17614154 None:intergenic 25.0%
!! GCAAATTTCTTTTGCTTAAT+AGG + chr1_1:17614258-17614277 None:intergenic 25.0%
! TATTTGTCATATACCAAAGA+GGG + chr1_1:17614495-17614514 None:intergenic 25.0%
CTTATCCTAAGTTTACAGTT+TGG - chr1_1:17610156-17610175 Msa0011700:CDS 30.0%
CTTTCAAGGAAAAAAGCAAA+GGG + chr1_1:17610285-17610304 None:intergenic 30.0%
GAATGGAATAATACCTTTCA+AGG + chr1_1:17610299-17610318 None:intergenic 30.0%
AGATTTCATGAAGAAGAGAA+TGG + chr1_1:17610316-17610335 None:intergenic 30.0%
GCATGCAAAAATATGTATGT+AGG + chr1_1:17610375-17610394 None:intergenic 30.0%
GTATTTCTTCATCTTTCTTC+AGG - chr1_1:17610612-17610631 Msa0011700:CDS 30.0%
CATCTTTCTTCAGGAAAATT+AGG - chr1_1:17610621-17610640 Msa0011700:CDS 30.0%
TATATATGTTGTGTCCTTCA+CGG - chr1_1:17611081-17611100 Msa0011700:intron 30.0%
ATTGGAACGCATGAAAATTA+AGG - chr1_1:17611511-17611530 Msa0011700:intron 30.0%
CGCATGAAAATTAAGGAAAT+AGG - chr1_1:17611518-17611537 Msa0011700:intron 30.0%
TTTCTAATGGCACTATACAA+AGG - chr1_1:17611587-17611606 Msa0011700:intron 30.0%
AAAGTCGATAATAGAGGATT+CGG + chr1_1:17611787-17611806 None:intergenic 30.0%
!! ATCCTCTATTATCGACTTTA+TGG - chr1_1:17611788-17611807 Msa0011700:intron 30.0%
! CAGTGTTGTAACTATTTTCA+TGG - chr1_1:17612211-17612230 Msa0011700:intron 30.0%
ACTCTTTGCTTCATTATATG+CGG - chr1_1:17612277-17612296 Msa0011700:intron 30.0%
TTAAATGCAGTCACAAAAAC+TGG + chr1_1:17612637-17612656 None:intergenic 30.0%
GTGACTATAATCATACGTAA+AGG + chr1_1:17612661-17612680 None:intergenic 30.0%
GTATTATATTATACCTTCCG+AGG + chr1_1:17612720-17612739 None:intergenic 30.0%
AAGTTGTATGAATGAGAAGT+GGG + chr1_1:17612977-17612996 None:intergenic 30.0%
TTTATGTACATCAGCATTGT+TGG - chr1_1:17613084-17613103 Msa0011700:intron 30.0%
! TCATCACTGACATCAATTTT+GGG + chr1_1:17613240-17613259 None:intergenic 30.0%
! ATCATCACTGACATCAATTT+TGG + chr1_1:17613241-17613260 None:intergenic 30.0%
GTGAGCATTATCAAATTAAG+TGG - chr1_1:17613311-17613330 Msa0011700:CDS 30.0%
AAATTAAGTGGTCACCTTAT+TGG - chr1_1:17613323-17613342 Msa0011700:CDS 30.0%
AATTAAGTGGTCACCTTATT+GGG - chr1_1:17613324-17613343 Msa0011700:CDS 30.0%
GTCATAGATATATCCCAATA+AGG + chr1_1:17613340-17613359 None:intergenic 30.0%
ATGTCAAGTCACACTATATA+TGG + chr1_1:17613362-17613381 None:intergenic 30.0%
TAAATAAAAGAGAGTCGTAG+CGG - chr1_1:17613548-17613567 Msa0011700:intron 30.0%
!! AGAAACCAAAGTTGATAGAA+AGG - chr1_1:17613794-17613813 Msa0011700:CDS 30.0%
!! GAAACCAAAGTTGATAGAAA+GGG - chr1_1:17613795-17613814 Msa0011700:CDS 30.0%
!! AGATAGAATTGAAGTGCTTT+TGG + chr1_1:17613994-17614013 None:intergenic 30.0%
AACTTATTTGATACCCTCTT+TGG - chr1_1:17614479-17614498 Msa0011700:intron 30.0%
CTATTTGTCATATACCAAAG+AGG + chr1_1:17614496-17614515 None:intergenic 30.0%
GTATATGACAAATAGCTCAT+GGG - chr1_1:17614501-17614520 Msa0011700:intron 30.0%
TATATGACAAATAGCTCATG+GGG - chr1_1:17614502-17614521 Msa0011700:intron 30.0%
CTTCTTCTTCTTAGTTTCTA+GGG + chr1_1:17614640-17614659 None:intergenic 30.0%
TCTTCTTCTTCTTAGTTTCT+AGG + chr1_1:17614641-17614660 None:intergenic 30.0%
TTTGTGAGAAAGTTAGTGCA+TGG - chr1_1:17610109-17610128 Msa0011700:CDS 35.0%
CTGAACCAAACTGTAAACTT+AGG + chr1_1:17610164-17610183 None:intergenic 35.0%
TGGAATGTATGTTCTGACTA+TGG - chr1_1:17610185-17610204 Msa0011700:CDS 35.0%
CCTTTCAAGGAAAAAAGCAA+AGG + chr1_1:17610286-17610305 None:intergenic 35.0%
!!! CCTTTGCTTTTTTCCTTGAA+AGG - chr1_1:17610283-17610302 Msa0011700:CDS 35.0%
AGGTCACATGAGTATATGAA+TGG + chr1_1:17610355-17610374 None:intergenic 35.0%
! ATTTTTGCATGCTCTGATGA+AGG - chr1_1:17610383-17610402 Msa0011700:CDS 35.0%
! TTTTTGCATGCTCTGATGAA+GGG - chr1_1:17610384-17610403 Msa0011700:CDS 35.0%
!! TTTTTAGCACTCAATGTAGC+TGG + chr1_1:17610547-17610566 None:intergenic 35.0%
AATATCCGAACTGTCATCTT+GGG + chr1_1:17610647-17610666 None:intergenic 35.0%
AAATATCCGAACTGTCATCT+TGG + chr1_1:17610648-17610667 None:intergenic 35.0%
TATTGCAAGTACAAAGGTGA+TGG + chr1_1:17610919-17610938 None:intergenic 35.0%
ATATTGCTGACGAACTTAGT+AGG - chr1_1:17611006-17611025 Msa0011700:intron 35.0%
!!! GATCATTCACATTTTCAGGT+TGG + chr1_1:17611658-17611677 None:intergenic 35.0%
CACCATAAAGTCGATAATAG+AGG + chr1_1:17611793-17611812 None:intergenic 35.0%
!! CTCTATTATCGACTTTATGG+TGG - chr1_1:17611791-17611810 Msa0011700:intron 35.0%
CACTACTTAATCTGAAGATG+AGG - chr1_1:17612005-17612024 Msa0011700:intron 35.0%
AACGGTAGCTAACTACAATT+CGG + chr1_1:17612353-17612372 None:intergenic 35.0%
AGGCTCTGTGATTAAAACTA+TGG - chr1_1:17612609-17612628 Msa0011700:intron 35.0%
GGCTCTGTGATTAAAACTAT+GGG - chr1_1:17612610-17612629 Msa0011700:intron 35.0%
TATGATTATAGTCACAGCCT+TGG - chr1_1:17612666-17612685 Msa0011700:intron 35.0%
TTATATTATACCTTCCGAGG+TGG + chr1_1:17612717-17612736 None:intergenic 35.0%
! GAGTGTTAGAAACACGTTTT+TGG + chr1_1:17612742-17612761 None:intergenic 35.0%
CAAGTTGTATGAATGAGAAG+TGG + chr1_1:17612978-17612997 None:intergenic 35.0%
!!! TTGTTGGGAGATTTTTTGTG+GGG + chr1_1:17613190-17613209 None:intergenic 35.0%
!!! CTTGTTGGGAGATTTTTTGT+GGG + chr1_1:17613191-17613210 None:intergenic 35.0%
!! TCAATTTTGGGGACAGTAAT+TGG + chr1_1:17613228-17613247 None:intergenic 35.0%
! CATCACTGACATCAATTTTG+GGG + chr1_1:17613239-17613258 None:intergenic 35.0%
TCTTCAACTATGACCAATTG+AGG + chr1_1:17613270-17613289 None:intergenic 35.0%
! TGTGACTTGACATTAGTCTA+AGG - chr1_1:17613369-17613388 Msa0011700:CDS 35.0%
TTGTTCTGCAACAAGTAAAG+TGG + chr1_1:17613414-17613433 None:intergenic 35.0%
AGTCAGCAATGCAATACAAA+AGG + chr1_1:17613518-17613537 None:intergenic 35.0%
! GTTCAAAGAATGTGTCATTG+TGG - chr1_1:17613578-17613597 Msa0011700:intron 35.0%
! TTTCTTTTGCTTAATAGGCC+AGG + chr1_1:17614253-17614272 None:intergenic 35.0%
! AACTAACGCAAGTGCATTTT+TGG + chr1_1:17614320-17614339 None:intergenic 35.0%
GGTATATGACAAATAGCTCA+TGG - chr1_1:17614500-17614519 Msa0011700:intron 35.0%
AAAATAGTGATCAGTCCTGT+TGG - chr1_1:17614525-17614544 Msa0011700:intron 35.0%
AAATAGTGATCAGTCCTGTT+GGG - chr1_1:17614526-17614545 Msa0011700:intron 35.0%
GAAGAAGAAGAAGAAGAAGA+AGG - chr1_1:17614650-17614669 Msa0011700:CDS 35.0%
! AGTTTACAGTTTGGTTCAGC+TGG - chr1_1:17610165-17610184 Msa0011700:CDS 40.0%
ACTATGGATGCCCTTAACAA+GGG - chr1_1:17610201-17610220 Msa0011700:CDS 40.0%
GTGACTCATACCCTTGTTAA+GGG + chr1_1:17610214-17610233 None:intergenic 40.0%
AGTGACTCATACCCTTGTTA+AGG + chr1_1:17610215-17610234 None:intergenic 40.0%
! TGATCAGTGCTTCACGTTTT+TGG - chr1_1:17610839-17610858 Msa0011700:CDS 40.0%
! GATCAGTGCTTCACGTTTTT+GGG - chr1_1:17610840-17610859 Msa0011700:CDS 40.0%
! ATCAGTGCTTCACGTTTTTG+GGG - chr1_1:17610841-17610860 Msa0011700:CDS 40.0%
!! TACAAAGGTGATGGAAGGTA+CGG + chr1_1:17610910-17610929 None:intergenic 40.0%
TTAATTAGCATGCGTGTGAG+TGG + chr1_1:17611184-17611203 None:intergenic 40.0%
! TCTTGGAGGTGCATTTCTAA+TGG - chr1_1:17611574-17611593 Msa0011700:intron 40.0%
GTCCTGTTCTTCAAATTGCT+GGG - chr1_1:17611609-17611628 Msa0011700:intron 40.0%
!!! ATTTTCAGGTTGGTGCATCT+GGG + chr1_1:17611648-17611667 None:intergenic 40.0%
! GTGGGATCATTCACATTTTC+AGG + chr1_1:17611662-17611681 None:intergenic 40.0%
GAAAATGTGAATGATCCCAC+TGG - chr1_1:17611662-17611681 Msa0011700:intron 40.0%
ACTACAATTCGGCACTTGAT+AGG + chr1_1:17612342-17612361 None:intergenic 40.0%
ACCTCAAACTCGTTGTCAAA+CGG + chr1_1:17612371-17612390 None:intergenic 40.0%
CTCATTGGGCCATTATTGAT+AGG + chr1_1:17612431-17612450 None:intergenic 40.0%
! TGAGTTTAGATGGGCTCATT+GGG + chr1_1:17612445-17612464 None:intergenic 40.0%
TTGGGTCTGTGAGTTTAGAT+GGG + chr1_1:17612454-17612473 None:intergenic 40.0%
ATGTACATCAGCATTGTTGG+AGG - chr1_1:17613087-17613106 Msa0011700:intron 40.0%
AGGACTGTACCTAGTTGTAT+GGG - chr1_1:17613125-17613144 Msa0011700:intron 40.0%
!! TTGATTTGCCCCATACAACT+AGG + chr1_1:17613137-17613156 None:intergenic 40.0%
!!! CCTTGTTGGGAGATTTTTTG+TGG + chr1_1:17613192-17613211 None:intergenic 40.0%
CCACAAAAAATCTCCCAACA+AGG - chr1_1:17613189-17613208 Msa0011700:intron 40.0%
! TAGTTGTTGGTGTCCTTGTT+GGG + chr1_1:17613205-17613224 None:intergenic 40.0%
! GGACAGTAATTGGTAGTTGT+TGG + chr1_1:17613218-17613237 None:intergenic 40.0%
ACTGCTTCTCTGTCTTTGTT+TGG + chr1_1:17613293-17613312 None:intergenic 40.0%
GCTTCCCTTTCTATCAACTT+TGG + chr1_1:17613802-17613821 None:intergenic 40.0%
!! AGAACAATGGACTAGCTAGT+AGG - chr1_1:17614100-17614119 Msa0011700:intron 40.0%
AAATGGGATAAGCCCAACTA+AGG - chr1_1:17614160-17614179 Msa0011700:intron 40.0%
ACCTATTCCCAACCTTAGTT+GGG + chr1_1:17614175-17614194 None:intergenic 40.0%
!!! GCATTTTTGGTAAGCTTGCA+GGG + chr1_1:17614307-17614326 None:intergenic 40.0%
!!! TGCATTTTTGGTAAGCTTGC+AGG + chr1_1:17614308-17614327 None:intergenic 40.0%
AATAGTGATCAGTCCTGTTG+GGG - chr1_1:17614527-17614546 Msa0011700:intron 40.0%
TATATACCAGTGGCTTATGG+GGG + chr1_1:17614599-17614618 None:intergenic 40.0%
GTATATACCAGTGGCTTATG+GGG + chr1_1:17614600-17614619 None:intergenic 40.0%
GGTATATACCAGTGGCTTAT+GGG + chr1_1:17614601-17614620 None:intergenic 40.0%
AGGTATATACCAGTGGCTTA+TGG + chr1_1:17614602-17614621 None:intergenic 40.0%
CCACTGGTATATACCTAAAG+CGG - chr1_1:17614606-17614625 Msa0011700:CDS 40.0%
! CTTCTTCTTAGTTTCTAGGG+TGG + chr1_1:17614637-17614656 None:intergenic 40.0%
GAAGAAGAAGAAGAAGAAGG+AGG - chr1_1:17615252-17615271 Msa0011700:CDS 40.0%
GACTATGGATGCCCTTAACA+AGG - chr1_1:17610200-17610219 Msa0011700:CDS 45.0%
TTAGGCCCAAGATGACAGTT+CGG - chr1_1:17610639-17610658 Msa0011700:CDS 45.0%
!! GCAAGTACAAAGGTGATGGA+AGG + chr1_1:17610915-17610934 None:intergenic 45.0%
GGTCCTGTTCTTCAAATTGC+TGG - chr1_1:17611608-17611627 Msa0011700:intron 45.0%
GACCCAGCAATTTGAAGAAC+AGG + chr1_1:17611614-17611633 None:intergenic 45.0%
!!! CATTTTCAGGTTGGTGCATC+TGG + chr1_1:17611649-17611668 None:intergenic 45.0%
TGAGAAGGAACAATGCACCA+AGG + chr1_1:17611700-17611719 None:intergenic 45.0%
GGTGCATTGTTCCTTCTCAT+TGG - chr1_1:17611701-17611720 Msa0011700:intron 45.0%
! TTCCTTCTCATTGGTTGTGC+TGG - chr1_1:17611710-17611729 Msa0011700:intron 45.0%
!! TATCGACTTTATGGTGGAGC+CGG - chr1_1:17611797-17611816 Msa0011700:intron 45.0%
ACCAATAAAGCAAACCCACG+TGG + chr1_1:17612180-17612199 None:intergenic 45.0%
! AAGCAAAGAGTCTAGAGTCC+AGG + chr1_1:17612268-17612287 None:intergenic 45.0%
ACCGTTTGACAACGAGTTTG+AGG - chr1_1:17612367-17612386 Msa0011700:CDS 45.0%
! GTGAGTTTAGATGGGCTCAT+TGG + chr1_1:17612446-17612465 None:intergenic 45.0%
GTTGGGTCTGTGAGTTTAGA+TGG + chr1_1:17612455-17612474 None:intergenic 45.0%
TGAGAGGACAATACAAGCCA+AGG + chr1_1:17612686-17612705 None:intergenic 45.0%
CAGGACTGTACCTAGTTGTA+TGG - chr1_1:17613124-17613143 Msa0011700:intron 45.0%
GGACTGTACCTAGTTGTATG+GGG - chr1_1:17613126-17613145 Msa0011700:intron 45.0%
! GTAGTTGTTGGTGTCCTTGT+TGG + chr1_1:17613206-17613225 None:intergenic 45.0%
GGATAAGCCCAACTAAGGTT+GGG - chr1_1:17614165-17614184 Msa0011700:intron 45.0%
GACCTATTCCCAACCTTAGT+TGG + chr1_1:17614176-17614195 None:intergenic 45.0%
ACTAAGGTTGGGAATAGGTC+AGG - chr1_1:17614176-17614195 Msa0011700:intron 45.0%
!!! TTGATGTCGTTTTCCCCAAC+AGG + chr1_1:17614543-17614562 None:intergenic 45.0%
! CCGCTTTAGGTATATACCAG+TGG + chr1_1:17614609-17614628 None:intergenic 45.0%
TAGGGTGGTTATACCGCTTT+AGG + chr1_1:17614622-17614641 None:intergenic 45.0%
GAAGAAGAAGAAGAAGGAGG+AGG - chr1_1:17615255-17615274 Msa0011700:CDS 45.0%
GAAGGAGCAGAAGAAGAAGA+AGG - chr1_1:17615300-17615319 Msa0011700:CDS 45.0%
!! TTTGTAATTTATTTATTTAT+AGG - chr1_1:17610808-17610827 Msa0011700:CDS 5.0%
!!! ATTTTTTAAAATTTATGAAT+TGG - chr1_1:17611414-17611433 Msa0011700:intron 5.0%
!!! TAATTTTAAATTTATCAATT+TGG - chr1_1:17611443-17611462 Msa0011700:intron 5.0%
AGCAAAGGGAGCAAGAGCAA+TGG + chr1_1:17610271-17610290 None:intergenic 50.0%
CTTAGAACTACCCATGCTCC+TGG + chr1_1:17611116-17611135 None:intergenic 50.0%
GGATGCCAAGCCAAAGTGAT+TGG - chr1_1:17611539-17611558 Msa0011700:intron 50.0%
CTGTGCCAATCACTTTGGCT+TGG + chr1_1:17611547-17611566 None:intergenic 50.0%
AGCCAAAGTGATTGGCACAG+TGG - chr1_1:17611547-17611566 Msa0011700:intron 50.0%
CACCACTGTGCCAATCACTT+TGG + chr1_1:17611552-17611571 None:intergenic 50.0%
ATTGGCACAGTGGTGAGTCT+TGG - chr1_1:17611557-17611576 Msa0011700:intron 50.0%
!! ATGATCCCACTGGTTCACAC+TGG - chr1_1:17611672-17611691 Msa0011700:intron 50.0%
AGCCAGCACAACCAATGAGA+AGG + chr1_1:17611715-17611734 None:intergenic 50.0%
AGAGATGTCACTAGCCACGT+GGG - chr1_1:17612163-17612182 Msa0011700:intron 50.0%
! GCCACGTGGGTTTGCTTTAT+TGG - chr1_1:17612176-17612195 Msa0011700:intron 50.0%
CTCTCAGAGAAACTCCACCT+CGG - chr1_1:17612700-17612719 Msa0011700:intron 50.0%
CATCAGCATTGTTGGAGGAG+TGG - chr1_1:17613092-17613111 Msa0011700:intron 50.0%
GGGATAAGCCCAACTAAGGT+TGG - chr1_1:17614164-17614183 Msa0011700:intron 50.0%
GCCCAACTAAGGTTGGGAAT+AGG - chr1_1:17614171-17614190 Msa0011700:intron 50.0%
GCTTAAAAAGGCTAGGCCGT+AGG + chr1_1:17614216-17614235 None:intergenic 50.0%
AGGCCAGGCTTAAAAAGGCT+AGG + chr1_1:17614223-17614242 None:intergenic 50.0%
!! TAGCCTTTTTAAGCCTGGCC+TGG - chr1_1:17614222-17614241 Msa0011700:intron 50.0%
TTTGCTTAATAGGCCAGGCC+TGG + chr1_1:17614248-17614267 None:intergenic 50.0%
AAGTAGTGGTCGGTCTGATG+GGG + chr1_1:17614576-17614595 None:intergenic 50.0%
GAAGTAGTGGTCGGTCTGAT+GGG + chr1_1:17614577-17614596 None:intergenic 50.0%
CTTATGGGGGAAGTAGTGGT+CGG + chr1_1:17614586-17614605 None:intergenic 50.0%
GAAGAAGAAGGAGCAGCAGA+AGG - chr1_1:17615312-17615331 Msa0011700:CDS 50.0%
! GATCCCACTTCCAGGAGCAT+GGG - chr1_1:17611103-17611122 Msa0011700:intron 55.0%
CTACCCATGCTCCTGGAAGT+GGG + chr1_1:17611109-17611128 None:intergenic 55.0%
ACTACCCATGCTCCTGGAAG+TGG + chr1_1:17611110-17611129 None:intergenic 55.0%
AGGAGCCAGTGTGAACCAGT+GGG + chr1_1:17611680-17611699 None:intergenic 55.0%
AAGGAGCCAGTGTGAACCAG+TGG + chr1_1:17611681-17611700 None:intergenic 55.0%
!! ACTGGTTCACACTGGCTCCT+TGG - chr1_1:17611680-17611699 Msa0011700:intron 55.0%
GTGGCTAGTGACATCTCTGC+TGG + chr1_1:17612161-17612180 None:intergenic 55.0%
CAGAGATGTCACTAGCCACG+TGG - chr1_1:17612162-17612181 Msa0011700:intron 55.0%
! ACACCCTGAAGCCTGGTCTT+TGG - chr1_1:17612241-17612260 Msa0011700:intron 55.0%
! CACCCTGAAGCCTGGTCTTT+GGG - chr1_1:17612242-17612261 Msa0011700:intron 55.0%
CGAGGTGGAGTTTCTCTGAG+AGG + chr1_1:17612702-17612721 None:intergenic 55.0%
CAGAGAAACTCCACCTCGGA+AGG - chr1_1:17612704-17612723 Msa0011700:intron 55.0%
CAGCATTGTTGGAGGAGTGG+TGG - chr1_1:17613095-17613114 Msa0011700:intron 55.0%
CATTGTTGGAGGAGTGGTGG+TGG - chr1_1:17613098-17613117 Msa0011700:intron 55.0%
AGGTTGGGAATAGGTCAGGC+CGG - chr1_1:17614180-17614199 Msa0011700:intron 55.0%
!! CGGCCTAGCCTTTTTAAGCC+TGG - chr1_1:17614217-17614236 Msa0011700:intron 55.0%
TGGCCAGGCCAGGCTTAAAA+AGG + chr1_1:17614228-17614247 None:intergenic 55.0%
!! TTTTTAAGCCTGGCCTGGCC+AGG - chr1_1:17614227-17614246 Msa0011700:intron 55.0%
TGGTCGGTCTGATGGGGAAA+AGG + chr1_1:17614570-17614589 None:intergenic 55.0%
GGAAGTAGTGGTCGGTCTGA+TGG + chr1_1:17614578-17614597 None:intergenic 55.0%
GTGGCTTATGGGGGAAGTAG+TGG + chr1_1:17614590-17614609 None:intergenic 55.0%
CTACTTCCCCCATAAGCCAC+TGG - chr1_1:17614590-17614609 Msa0011700:intron 55.0%
GGAGAAGGAGAAGCAGGAGA+AGG - chr1_1:17615354-17615373 Msa0011700:CDS 55.0%
GGAGAAGCAGGAGAAGGAGA+AGG - chr1_1:17615360-17615379 Msa0011700:CDS 55.0%
GGAGAAGGAGAAGGAGAAGC+AGG - chr1_1:17615369-17615388 Msa0011700:CDS 55.0%
GGAGAAGGAGAAGCAGGAGA+AGG - chr1_1:17615354-17615373 Msa0011700:CDS 55.0%
GAAGGAGAAGCAGGAGAAGG+AGG - chr1_1:17615357-17615376 Msa0011700:CDS 55.0%
CCTGGAAGTGGGATCCGTGA+AGG + chr1_1:17611098-17611117 None:intergenic 60.0%
CCTTCACGGATCCCACTTCC+AGG - chr1_1:17611095-17611114 Msa0011700:intron 60.0%
GGATCCCACTTCCAGGAGCA+TGG - chr1_1:17611102-17611121 Msa0011700:intron 60.0%
GGCACAGTGGTGAGTCTTGG+AGG - chr1_1:17611560-17611579 Msa0011700:intron 60.0%
AGCGCAAACACCCTGAAGCC+TGG - chr1_1:17612234-17612253 Msa0011700:intron 60.0%
GGCCCAAAGACCAGGCTTCA+GGG + chr1_1:17612247-17612266 None:intergenic 60.0%
AGGCCCAAAGACCAGGCTTC+AGG + chr1_1:17612248-17612267 None:intergenic 60.0%
! TGAAGCCTGGTCTTTGGGCC+TGG - chr1_1:17612247-17612266 Msa0011700:intron 60.0%
AGAGTCCAGGCCCAAAGACC+AGG + chr1_1:17612255-17612274 None:intergenic 60.0%
!! GGAGGAGTGGTGGTGGTTAC+AGG - chr1_1:17613105-17613124 Msa0011700:intron 60.0%
AATAGGTCAGGCCGGCCTAC+AGG - chr1_1:17614188-17614207 Msa0011700:intron 60.0%
ATAGGTCAGGCCGGCCTACA+GGG - chr1_1:17614189-17614208 Msa0011700:intron 60.0%
TTAATAGGCCAGGCCTGGCC+AGG + chr1_1:17614243-17614262 None:intergenic 60.0%
CGCGAGCAAAATGTGCTGGG+TGG + chr1_1:17614284-17614303 None:intergenic 60.0%
GGGCGCGAGCAAAATGTGCT+GGG + chr1_1:17614287-17614306 None:intergenic 60.0%
AGGGCGCGAGCAAAATGTGC+TGG + chr1_1:17614288-17614307 None:intergenic 60.0%
GAAGGAGGAGGAGCAGCAGA+AGG - chr1_1:17615267-17615286 Msa0011700:CDS 60.0%
GCAGAAGGAGCAGGAGGAGA+AGG - chr1_1:17615282-17615301 Msa0011700:CDS 60.0%
GAAGGAGCAGCAGAAGGAGC+AGG - chr1_1:17615318-17615337 Msa0011700:CDS 60.0%
GCAGAAGGAGCAGGAGGAGA+AGG - chr1_1:17615282-17615301 Msa0011700:CDS 60.0%
GGAGGAGAAGGAGCAGGAGA+AGG - chr1_1:17615339-17615358 Msa0011700:CDS 60.0%
GGAGCAGGAGAAGGAGAAGC+AGG - chr1_1:17615348-17615367 Msa0011700:CDS 60.0%
GGAGAAGCAGGAGAAGGAGG+AGG - chr1_1:17615381-17615400 Msa0011700:CDS 60.0%
GAAGCAGGAGAAGGAGGAGG+AGG - chr1_1:17615384-17615403 Msa0011700:CDS 60.0%
TAGGTCAGGCCGGCCTACAG+GGG - chr1_1:17614190-17614209 Msa0011700:intron 65.0%
GGAGGAGCAGCAGAAGGAGC+AGG - chr1_1:17615273-17615292 Msa0011700:CDS 65.0%
GGAGCAGCAGAAGGAGCAGG+AGG - chr1_1:17615276-17615295 Msa0011700:CDS 65.0%
GGAGCAGCAGAAGGAGCAGG+AGG - chr1_1:17615276-17615295 Msa0011700:CDS 65.0%
GGAGCAGGAGGAGAAGGAGC+AGG - chr1_1:17615288-17615307 Msa0011700:CDS 65.0%
GCAGGAGAAGGAGGAGGAGG+AGG - chr1_1:17615387-17615406 Msa0011700:CDS 65.0%
GGAGAAGGAGGAGGAGGAGG+AGG - chr1_1:17615390-17615409 Msa0011700:CDS 65.0%
GAAGGAGGAGGAGGAGGAGG+AGG - chr1_1:17615393-17615412 Msa0011700:CDS 65.0%
GAGGAGGAGGAGGAGGAGGA+GGG - chr1_1:17615397-17615416 Msa0011700:CDS 65.0%
AGGAGGAGGAGGAGGAGGGA+GGG - chr1_1:17615410-17615429 Msa0011700:CDS 65.0%
GCTAGGCCGTAGGCCCCTGT+AGG + chr1_1:17614206-17614225 None:intergenic 70.0%
GGAGGAGGAGGAGGAGGAGG+AGG - chr1_1:17615396-17615415 Msa0011700:CDS 70.0%
GGAGGAGGAGGAGGAGGAGG+AGG - chr1_1:17615396-17615415 Msa0011700:CDS 70.0%
GGAGGAGGAGGAGGAGGAGG+AGG - chr1_1:17615396-17615415 Msa0011700:CDS 70.0%
GGAGGAGGAGGAGGAGGAGG+AGG - chr1_1:17615396-17615415 Msa0011700:CDS 70.0%
GAGGAGGAGGAGGAGGAGGG+AGG - chr1_1:17615409-17615428 Msa0011700:CDS 70.0%
GGAGGAGGAGGAGGAGGGAG+GGG - chr1_1:17615411-17615430 Msa0011700:CDS 70.0%
GAGGAGGAGGAGGAGGGAGG+GGG - chr1_1:17615412-17615431 Msa0011700:CDS 70.0%
AGGAGGAGGAGGAGGGAGGG+GGG - chr1_1:17615413-17615432 Msa0011700:CDS 70.0%
GAGGAGGGAGGGGGGAGAGT+GGG - chr1_1:17615421-17615440 Msa0011700:CDS 70.0%
GGCCGGCCTACAGGGGCCTA+CGG - chr1_1:17614197-17614216 Msa0011700:intron 75.0%
GGCCGTAGGCCCCTGTAGGC+CGG + chr1_1:17614202-17614221 None:intergenic 75.0%
AAGCCTGGCCTGGCCAGGCC+TGG - chr1_1:17614232-17614251 Msa0011700:intron 75.0%
GGAGGAGGGAGGGGGGAGAG+TGG - chr1_1:17615420-17615439 Msa0011700:CDS 75.0%
! AGGCCAGGCCTGGCCAGGCC+AGG + chr1_1:17614238-17614257 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 17610093 17615447 17610093 ID=Msa0011700;Name=Msa0011700
chr1_1 mRNA 17610093 17615447 17610093 ID=Msa0011700-mRNA-1;Parent=Msa0011700;Name=Msa0011700-mRNA-1;_AED=0.24;_eAED=0.24;_QI=0|0|0|0.87|1|1|8|0|634
chr1_1 exon 17615236 17615447 17615236 ID=Msa0011700-mRNA-1:exon:6438;Parent=Msa0011700-mRNA-1
chr1_1 exon 17614844 17614906 17614844 ID=Msa0011700-mRNA-1:exon:6437;Parent=Msa0011700-mRNA-1
chr1_1 exon 17614594 17614710 17614594 ID=Msa0011700-mRNA-1:exon:6436;Parent=Msa0011700-mRNA-1
chr1_1 exon 17613783 17614029 17613783 ID=Msa0011700-mRNA-1:exon:6435;Parent=Msa0011700-mRNA-1
chr1_1 exon 17613242 17613403 17613242 ID=Msa0011700-mRNA-1:exon:6434;Parent=Msa0011700-mRNA-1
chr1_1 exon 17612815 17612966 17612815 ID=Msa0011700-mRNA-1:exon:6433;Parent=Msa0011700-mRNA-1
chr1_1 exon 17612288 17612442 17612288 ID=Msa0011700-mRNA-1:exon:6432;Parent=Msa0011700-mRNA-1
chr1_1 exon 17610093 17610889 17610093 ID=Msa0011700-mRNA-1:exon:6431;Parent=Msa0011700-mRNA-1
chr1_1 CDS 17615236 17615447 17615236 ID=Msa0011700-mRNA-1:cds;Parent=Msa0011700-mRNA-1
chr1_1 CDS 17614844 17614906 17614844 ID=Msa0011700-mRNA-1:cds;Parent=Msa0011700-mRNA-1
chr1_1 CDS 17614594 17614710 17614594 ID=Msa0011700-mRNA-1:cds;Parent=Msa0011700-mRNA-1
chr1_1 CDS 17613783 17614029 17613783 ID=Msa0011700-mRNA-1:cds;Parent=Msa0011700-mRNA-1
chr1_1 CDS 17613242 17613403 17613242 ID=Msa0011700-mRNA-1:cds;Parent=Msa0011700-mRNA-1
chr1_1 CDS 17612815 17612966 17612815 ID=Msa0011700-mRNA-1:cds;Parent=Msa0011700-mRNA-1
chr1_1 CDS 17612288 17612442 17612288 ID=Msa0011700-mRNA-1:cds;Parent=Msa0011700-mRNA-1
chr1_1 CDS 17610093 17610889 17610093 ID=Msa0011700-mRNA-1:cds;Parent=Msa0011700-mRNA-1
Gene Sequence

>Msa0011700

ATGGGTGAGTTAACATTTTGTGAGAAAGTTAGTGCATGGTTTAGAAATTCTAAATCATACTTGCTTATCCTAAGTTTACAGTTTGGTTCAGCTGGAATGTATGTTCTGACTATGGATGCCCTTAACAAGGGTATGAGTCACTATATTTTTGTGGTGTATCGTAATGTCATTGCAACCATTGCTCTTGCTCCCTTTGCTTTTTTCCTTGAAAGGAAAATTAGGCCCAAGATGACAGTTCGGATATTTTCAGAAATTTTTGCACTAGCTTTTGTCGAGATAATACTTGATCAGTGCTTCACGTTTTTGGGGATGAAGCTAACATCAGCATCTTTTGCATCTGCTGTGATGAATTCCGTACCTTCCATCACCTTTGTACTTGCAATAATTTTTAGATTGGAACGCATGAAAATTAAGGAAATAGGATGCCAAGCCAAAGTGATTGGCACAGTGGTGAGTCTTGGAGGTGCATTTCTAATGGCACTATACAAAGGTCCTGTTCTTCAAATTGCTGGGTCATCAGCAGCTACCCAGATGCACCAACCTGAAAATGTGAATGATCCCACTGGTTCACACTGGCTCCTTGGTGCATTGTTCCTTCTCATTGGTTGTGCTGGCTTCTCTGCATTCTACATTTTACAAGCTATAACATTGAGAAAGTATCCAGCAGAGATGTCACTAGCCACGTGGGTTTGCTTTATTGGTGCACTTCAAAGCAGTGTTGTAACTATTTTCATGGAGCGCAAACACCCTGAAGCCTGGTCTTTGGGCCTGGACTCTAGACTCTTTGCTTCATTATATGCGGGAATTGTAACTTCAGCAATTCAATTTTATGTTCAAGGCTCTGTGATTAAAACTATGGGACCAGTTTTTGTGACTGCATTTAATCCTTTACGTATGATTATAGTCACAGCCTTGGCTTGTATTGTCCTCTCAGAGAAACTCCACCTCGGAAGCATTGTTGGAGGAGTGGTGGTGGTTACAGGACTGTACCTAGTTGTATGGGGCAAATCAAAAGAACAAAAAGCAATGATGTCAGATGAGTCCCCACAAAAAATCTCCCAACAAGGACACCAACAACTACCAATTACTGTCCCCAAAATTGATGTCAAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGGAGGAGGAGCAGCAGAAGGAGCAGGAGGAGAAGGAGCAGAAGAAGAAGAAGGAGCAGCAGAAGGAGCAGGAGGAGAAGGAGCAGGAGAAGGAGAAGCAGGAGAAGGAGAAGGAGAAGCAGGAGAAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGGAGGGGGGAGAGTGGGATGA
Protein sequence

>Msa0011700

MGELTFCEKVSAWFRNSKSYLLILSLQFGSAGMYVLTMDALNKGMSHYIFVVYRNVIATIALAPFAFFLERKIRPKMTVRIFSEIFALAFVEIILDQCFTFLGMKLTSASFASAVMNSVPSITFVLAIIFRLERMKIKEIGCQAKVIGTVVSLGGAFLMALYKGPVLQIAGSSAATQMHQPENVNDPTGSHWLLGALFLLIGCAGFSAFYILQAITLRKYPAEMSLATWVCFIGALQSSVVTIFMERKHPEAWSLGLDSRLFASLYAGIVTSAIQFYVQGSVIKTMGPVFVTAFNPLRMIIVTALACIVLSEKLHLGSIVGGVVVVTGLYLVVWGKSKEQKAMMSDESPQKISQQGHQQLPITVPKIDVKEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKEEEQQKEQEEKEQKKKKEQQKEQEEKEQEKEKQEKEKEKQEKEEEEEEEEEEGGGRVG*