AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1268360

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1268360 MtrunA17_Chr5g0405701 97.451 1177 28 2 1 1177 25 1199 0.0 2394
Msa1268360 MtrunA17_Chr8g0371601 73.610 1205 256 14 1 1178 1 1170 0.0 1748
Msa1268360 MtrunA17_Chr1g0197591 31.429 385 236 7 385 751 280 654 1.71e-40 162
Msa1268360 MtrunA17_Chr1g0197591 38.129 139 63 5 1023 1161 921 1036 5.44e-16 83.6
Msa1268360 MtrunA17_Chr8g0377481 34.062 320 187 6 439 741 345 657 3.77e-38 155
Msa1268360 MtrunA17_Chr8g0377481 34.722 144 62 2 1025 1162 838 955 6.03e-18 90.1
Msa1268360 MtrunA17_Chr1g0194741 33.429 347 209 8 398 725 307 650 5.78e-38 152
Msa1268360 MtrunA17_Chr3g0122391 32.704 318 192 6 442 741 396 709 9.18e-38 154
Msa1268360 MtrunA17_Chr3g0122391 34.932 146 64 2 1022 1162 893 1012 9.58e-17 86.3
Msa1268360 MtrunA17_Chr8g0392301 33.036 336 191 7 439 741 336 670 7.62e-36 147
Msa1268360 MtrunA17_Chr8g0392301 31.953 169 74 4 1025 1178 858 1000 1.95e-15 81.6
Msa1268360 MtrunA17_Chr5g0447641 30.982 326 191 6 441 741 572 888 5.32e-32 135
Msa1268360 MtrunA17_Chr5g0447641 30.814 172 69 4 1015 1162 1055 1200 1.57e-13 75.9
Msa1268360 MtrunA17_Chr7g0269631 33.721 258 145 4 476 731 334 567 8.65e-32 133
Msa1268360 MtrunA17_Chr4g0013831 32.210 267 154 5 476 740 334 575 2.92e-29 125
Msa1268360 MtrunA17_Chr3g0136601 30.537 298 158 6 489 753 373 654 8.04e-26 115
Msa1268360 MtrunA17_Chr1g0150511 28.939 311 171 6 489 751 379 687 3.16e-24 110
Msa1268360 MtrunA17_Chr1g0194731 31.250 160 86 4 1012 1170 312 448 1.92e-15 80.5
Msa1268360 MtrunA17_Chr7g0274831 25.228 329 216 5 475 798 364 667 1.57e-14 78.6
Msa1268360 MtrunA17_Chr8g0343551 52.381 63 26 2 1099 1161 15 73 3.19e-13 66.6
Msa1268360 MtrunA17_Chr1g0186431 31.655 139 94 1 476 614 355 492 2.50e-12 71.6
Msa1268360 MtrunA17_Chr1g0190021 23.810 378 233 11 475 836 360 698 2.75e-11 68.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1268360 AT2G17820.1 65.414 1197 368 14 4 1177 26 1199 0.0 1575
Msa1268360 AT2G47430.1 28.793 837 466 25 410 1162 318 1108 7.82e-73 265
Msa1268360 AT1G27320.1 34.036 332 209 4 436 758 400 730 1.24e-41 167
Msa1268360 AT1G27320.1 32.051 156 62 2 1025 1162 887 1016 8.06e-15 80.1
Msa1268360 AT2G01830.2 32.727 330 195 6 445 749 431 758 1.96e-41 166
Msa1268360 AT2G01830.2 33.540 161 75 2 1022 1176 939 1073 6.94e-17 87.0
Msa1268360 AT2G01830.1 33.230 322 188 6 445 741 408 727 2.02e-41 166
Msa1268360 AT2G01830.1 33.540 161 75 2 1022 1176 916 1050 8.13e-17 86.7
Msa1268360 AT2G01830.4 33.230 322 188 6 445 741 408 727 2.02e-41 166
Msa1268360 AT2G01830.4 33.540 161 75 2 1022 1176 916 1050 8.13e-17 86.7
Msa1268360 AT2G01830.6 33.230 322 188 6 445 741 408 727 2.02e-41 166
Msa1268360 AT2G01830.6 33.540 161 75 2 1022 1176 916 1050 8.13e-17 86.7
Msa1268360 AT2G01830.3 33.230 322 188 6 445 741 408 727 2.02e-41 166
Msa1268360 AT2G01830.3 33.540 161 75 2 1022 1176 916 1050 8.13e-17 86.7
Msa1268360 AT2G01830.5 33.230 322 188 6 445 741 420 739 2.06e-41 166
Msa1268360 AT2G01830.5 33.540 161 75 2 1022 1176 928 1062 8.39e-17 86.7
Msa1268360 AT5G35750.1 26.642 533 312 13 439 936 540 1028 2.05e-38 157
Msa1268360 AT5G35750.1 28.313 166 75 2 1029 1176 1036 1175 1.04e-14 80.1
Msa1268360 AT1G66340.1 32.453 265 152 5 476 740 333 570 1.94e-32 136
Msa1268360 AT5G10720.1 30.422 332 198 6 489 804 369 683 2.09e-29 127
Msa1268360 AT2G40940.1 31.884 276 158 5 460 729 313 564 1.33e-28 123
Msa1268360 AT3G04580.2 33.553 152 72 4 1020 1170 634 757 2.80e-13 75.1
Msa1268360 AT3G04580.2 26.100 341 211 12 474 798 355 670 8.34e-13 73.6
Msa1268360 AT3G04580.1 33.553 152 72 4 1020 1170 634 757 2.80e-13 75.1
Msa1268360 AT3G04580.1 26.100 341 211 12 474 798 355 670 8.34e-13 73.6

Find 194 sgRNAs with CRISPR-Local

Find 366 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCGACGAAGCTCAGTCTTTA+TGG 0.101440 8_3:-1362975 None:intergenic
TTAAATCCTTCAAGATTTAT+TGG 0.172560 8_3:-1362782 None:intergenic
TTACAACTATGTACATTTCT+AGG 0.187196 8_3:-1364244 None:intergenic
TCATCGGTTAACTTTAAAAT+TGG 0.200671 8_3:-1363205 None:intergenic
CCGTCTTCTTAACAACATAT+TGG 0.249014 8_3:+1360564 Msa1268360:CDS
GAGTCACCTCTAACTAATTT+TGG 0.254567 8_3:-1361127 None:intergenic
TTCTTCTAATAAAAGTATTA+TGG 0.254759 8_3:+1359000 Msa1268360:CDS
GTTGCAACCCTTTGAATTAC+TGG 0.261968 8_3:-1363406 None:intergenic
GCCAATTGACTTCAAGCTTA+TGG 0.265808 8_3:+1364188 Msa1268360:CDS
GCTTGCACTACAAGGCAATA+TGG 0.271450 8_3:+1362613 Msa1268360:CDS
GAGTGGTTGCAGAGAACTTA+TGG 0.273458 8_3:+1359235 Msa1268360:CDS
TATATACATTTATTTCTATT+AGG 0.278525 8_3:-1364399 None:intergenic
TTCGGCAGCTTTACCTGTTT+GGG 0.279753 8_3:+1358976 Msa1268360:CDS
TTTCGGCAGCTTTACCTGTT+TGG 0.281134 8_3:+1358975 Msa1268360:CDS
ACACCTATGGCAGCAGTAAT+TGG 0.293817 8_3:+1360451 Msa1268360:CDS
CTCTTTGCATGACTTGCATT+TGG 0.297699 8_3:-1361481 None:intergenic
TCAATATGATTTGATCCTAA+TGG 0.301867 8_3:+1363588 Msa1268360:CDS
AAGGAAGTCTCTTCAAGTTT+AGG 0.303079 8_3:-1359342 None:intergenic
GCCTCATATCCATCCATCTT+TGG 0.303088 8_3:-1364036 None:intergenic
CATCAAAGTTGTTATTGTTA+TGG 0.319766 8_3:-1362751 None:intergenic
TGAACCTCACGAGTTGAATT+AGG 0.322157 8_3:-1359268 None:intergenic
CATGCCAACCTTAAGGCATT+TGG 0.328149 8_3:-1364148 None:intergenic
TGTCCCATGATATACTTTCT+TGG 0.328708 8_3:-1359943 None:intergenic
GGACTATCGTTGCAAGAGTT+TGG 0.330068 8_3:-1361403 None:intergenic
AGTGGATGCTCTTAATTATA+TGG 0.332374 8_3:+1363486 Msa1268360:CDS
TTGCAACACAAGCTTATGAT+AGG 0.334949 8_3:+1363308 Msa1268360:CDS
TTGACTTAAGCACAGATATA+TGG 0.337006 8_3:+1362873 Msa1268360:CDS
AACTTCCTTCACAAGTATTT+CGG 0.341250 8_3:+1362908 Msa1268360:CDS
GTAATGTTAGCCATCTTGAT+AGG 0.342025 8_3:+1357686 Msa1268360:CDS
ACATGTTTAATAGACTATTC+AGG 0.345267 8_3:+1357381 Msa1268360:CDS
GCTTACAGTCTAGTAGTTGA+TGG 0.352312 8_3:-1361719 None:intergenic
AGAAATCAAGGTTACCAAAA+AGG 0.359146 8_3:+1362350 Msa1268360:CDS
AGCAGGACTTTCACAAGTTC+CGG 0.361656 8_3:+1358898 Msa1268360:CDS
TATGTACATTTCTAGGTTGT+TGG 0.363384 8_3:-1364237 None:intergenic
TACAGATTCGCCTTTGCTTT+CGG 0.364558 8_3:+1358958 Msa1268360:CDS
TGTGAAATGCCATGTTAATA+TGG 0.365711 8_3:-1357717 None:intergenic
AGAAATCACTTGAAGGGTTA+AGG 0.373683 8_3:+1363362 Msa1268360:CDS
CTTTATGTTCATCAAGTTCA+AGG 0.387857 8_3:+1357333 Msa1268360:five_prime_UTR
AACCGATGAAAATGAACATT+TGG 0.389298 8_3:+1363219 Msa1268360:CDS
TATTCAGGTTTACCAATTCA+TGG 0.394690 8_3:+1357396 Msa1268360:CDS
GACAGTGACTACTAGCATAT+TGG 0.397259 8_3:-1357481 None:intergenic
AGGCATGGAGGGACTGGTCT+AGG 0.397957 8_3:+1362017 Msa1268360:intron
ACCATAAGCTTGAAGTCAAT+TGG 0.402673 8_3:-1364189 None:intergenic
CCCTTTCAACTCATCAAGCT+TGG 0.402852 8_3:+1358756 Msa1268360:CDS
GCTATGTTGATCAAATCTTC+TGG 0.404417 8_3:-1358878 None:intergenic
ACTTGCTCAGCTTGAGATGC+AGG 0.406924 8_3:-1357902 None:intergenic
GTACAAGATTCTTCTTCCCT+TGG 0.408031 8_3:-1363253 None:intergenic
TGGAAAATTCTTCTACCTCT+TGG 0.415464 8_3:-1357434 None:intergenic
ATGAGGCAACAAAAGCAATA+AGG 0.417051 8_3:+1364052 Msa1268360:CDS
TCCACAGCCATCTTAAGCTT+TGG 0.417058 8_3:-1359181 None:intergenic
AACACAGAATCCCATTTGCT+TGG 0.417471 8_3:-1361674 None:intergenic
TAGTTAGAGGTGACTCTGGC+AGG 0.423741 8_3:+1361134 Msa1268360:CDS
GAGATAACAAAGTGATACTT+TGG 0.425255 8_3:+1361515 Msa1268360:CDS
TGGGATGACAAAACAATTCA+TGG 0.425736 8_3:+1358776 Msa1268360:CDS
TTTGACAGACAATGGCTTAG+TGG 0.429155 8_3:+1362452 Msa1268360:CDS
CTCCAATGGGCAATAAATAT+AGG 0.429398 8_3:+1357357 Msa1268360:exon
TGTGGTTAGATTAGCAATCA+TGG 0.432976 8_3:+1357526 Msa1268360:CDS
TACACTATATAGGTGGAGTC+TGG 0.435729 8_3:+1360706 Msa1268360:intron
TTTGATCCTAATGGATTGTC+AGG 0.439291 8_3:+1363597 Msa1268360:CDS
AAACTTGAAGAGACTTCCTT+TGG 0.443045 8_3:+1359345 Msa1268360:CDS
TCTTTGCATCGTTAGGAACT+TGG 0.444026 8_3:+1362040 Msa1268360:CDS
TAGGTATCGATCCAAGCAAA+TGG 0.444365 8_3:+1361663 Msa1268360:intron
CCTTTCAACTCATCAAGCTT+GGG 0.447280 8_3:+1358757 Msa1268360:CDS
TTAGGATCAAATCATATTGA+TGG 0.448278 8_3:-1363585 None:intergenic
GATATGCCAAAATTAGTTAG+AGG 0.449305 8_3:+1361121 Msa1268360:CDS
TATTTCAGGCATGGAGGGAC+TGG 0.458163 8_3:+1362011 Msa1268360:intron
TCGGAAAGGACACTTACTAA+TGG 0.460922 8_3:+1362994 Msa1268360:CDS
AAGCATCCATGCCAACCTTA+AGG 0.465093 8_3:-1364155 None:intergenic
TACCTATATTTATTGCCCAT+TGG 0.466197 8_3:-1357359 None:intergenic
ATATTCCACATCCTCAAAAT+CGG 0.469359 8_3:-1357806 None:intergenic
TGGTTTAGTGAGTGAGAGAA+TGG 0.469497 8_3:-1364217 None:intergenic
AGAAATAAATGTATATAGAA+AGG 0.471186 8_3:+1364405 Msa1268360:three_prime_UTR
CTTGCACTACAAGGCAATAT+GGG 0.472560 8_3:+1362614 Msa1268360:CDS
CATTATCCAATAAATCTTGA+AGG 0.473443 8_3:+1362776 Msa1268360:CDS
ATATGATTGCACTTTGTTGA+AGG 0.476921 8_3:+1364346 Msa1268360:three_prime_UTR
TTTAGCTTTGTTGTCTTCAG+AGG 0.483395 8_3:-1363275 None:intergenic
AGGAAATCAGAGGAAGGAAC+AGG 0.483804 8_3:+1364072 Msa1268360:CDS
TGAGAGATCTTTCAAAACAT+TGG 0.483958 8_3:+1359972 Msa1268360:CDS
CATACCAAGAAAGTATATCA+TGG 0.484306 8_3:+1359939 Msa1268360:CDS
CTTCATCACAAGACATTGCA+TGG 0.484352 8_3:-1364125 None:intergenic
ATAACAATCAATTACAAGAA+TGG 0.485356 8_3:+1358626 Msa1268360:CDS
TGTATGACAGTCATGAACTA+AGG 0.486515 8_3:+1360428 Msa1268360:intron
CAGGTATTGCTTGCACTACA+AGG 0.486574 8_3:+1362605 Msa1268360:intron
AATGATAAGAAATCACTTGA+AGG 0.487266 8_3:+1363355 Msa1268360:CDS
TGATGAAGCCAAATGCCTTA+AGG 0.487966 8_3:+1364140 Msa1268360:CDS
TTTGTCATTGTTGTTGACAT+TGG 0.490082 8_3:+1362845 Msa1268360:CDS
GCCAAAGATGGATGGATATG+AGG 0.491952 8_3:+1364035 Msa1268360:CDS
AGTTCACTAGTATCAGTAAA+CGG 0.492218 8_3:+1364296 Msa1268360:three_prime_UTR
AAAAGTATTATGGCTGTTGT+TGG 0.492363 8_3:+1359010 Msa1268360:CDS
CTCTTCCGAAATACTTGTGA+AGG 0.492381 8_3:-1362913 None:intergenic
TGGGCTGTTAGAGCAACAAT+TGG 0.493691 8_3:-1364105 None:intergenic
GTTGTTGTTGCTGTAGGTGA+TGG 0.497897 8_3:+1363454 Msa1268360:CDS
CCAAGCTTGATGAGTTGAAA+GGG 0.499413 8_3:-1358756 None:intergenic
ACAGCCATCTTAAGCTTTGG+TGG 0.499420 8_3:-1359178 None:intergenic
TTCATACCTGACAATCCATT+AGG 0.501681 8_3:-1363603 None:intergenic
TAAGATGGGTGGAGAAATCA+AGG 0.502216 8_3:+1362338 Msa1268360:CDS
GCCATCTTAAGCTTTGGTGG+TGG 0.502735 8_3:-1359175 None:intergenic
GATACTTTGGTTTGAAGTTG+AGG 0.505428 8_3:+1361528 Msa1268360:CDS
ACTTGGGACGCGAACTTGAA+GGG 0.507406 8_3:+1360758 Msa1268360:CDS
GTCTAGGTCTTTGCATCGTT+AGG 0.507867 8_3:+1362033 Msa1268360:CDS
TGCCATGTAGCTACACCATC+CGG 0.509110 8_3:-1358917 None:intergenic
TACTAAGCATCAAAGATATG+AGG 0.509714 8_3:+1362813 Msa1268360:CDS
AGTGGTTGCAGAGAACTTAT+GGG 0.510065 8_3:+1359236 Msa1268360:CDS
ATAGATATAGCAATGAGTTA+TGG 0.510083 8_3:+1357270 None:intergenic
TTATTAGAAGAATCCCAAAC+AGG 0.512019 8_3:-1358989 None:intergenic
CATGTTGAGAATGCTAAGCT+AGG 0.514123 8_3:+1359289 Msa1268360:CDS
TGATACTAGTGAACTCAGTA+AGG 0.519583 8_3:-1364288 None:intergenic
AAGATACACCAGTAATTCAA+AGG 0.521392 8_3:+1363398 Msa1268360:CDS
ATCAAGTTCAAGGTCTCCAA+TGG 0.522476 8_3:+1357343 Msa1268360:exon
TTCTGAAATTACAACAGCTC+AGG 0.525125 8_3:+1357841 Msa1268360:CDS
TTCCGGATGGTGTAGCTACA+TGG 0.528222 8_3:+1358915 Msa1268360:CDS
GAAGTTGAGGACACAGGCTG+TGG 0.528521 8_3:+1361541 Msa1268360:CDS
TTACTTATTTCAGGCATGGA+GGG 0.534505 8_3:+1362006 Msa1268360:intron
GTCAATTCCTTGCAAACATG+AGG 0.534970 8_3:+1360151 Msa1268360:CDS
GCTTTAAATTTGACAGACAA+TGG 0.536936 8_3:+1362444 Msa1268360:CDS
TGGATGGCAGGTTAATAAGA+TGG 0.537101 8_3:+1362323 Msa1268360:intron
AGATCTTTCAAATTACTCCA+TGG 0.538971 8_3:+1358706 Msa1268360:CDS
GGAGCTGTTGTTGTTGCTGT+AGG 0.539267 8_3:+1363448 Msa1268360:CDS
GGATGGCAGGTTAATAAGAT+GGG 0.539780 8_3:+1362324 Msa1268360:intron
GACTTGGGACGCGAACTTGA+AGG 0.541648 8_3:+1360757 Msa1268360:CDS
TTTGCTTCTTAGTGTACCAA+TGG 0.542330 8_3:+1362401 Msa1268360:CDS
ATTGACAAATGGAGTGTCAA+AGG 0.544031 8_3:+1360053 Msa1268360:CDS
AGGTATCGATCCAAGCAAAT+GGG 0.547486 8_3:+1361664 Msa1268360:intron
CCCAAGCTTGATGAGTTGAA+AGG 0.549150 8_3:-1358757 None:intergenic
AAGGGACTTGACCATGTTTG+AGG 0.549611 8_3:-1358738 None:intergenic
CCATAAAGACTGAGCTTCGT+CGG 0.550895 8_3:+1362975 Msa1268360:CDS
AATTAGATGCCAAAGATGGA+TGG 0.551523 8_3:+1364027 Msa1268360:intron
GCCACCACCAAAGCTTAAGA+TGG 0.552183 8_3:+1359174 Msa1268360:CDS
AAATAAACCTCATGTTTGCA+AGG 0.556476 8_3:-1360158 None:intergenic
GGAAAATTAGATGCCAAAGA+TGG 0.561731 8_3:+1364023 Msa1268360:intron
AATCCAATTACTGCTGCCAT+AGG 0.562131 8_3:-1360454 None:intergenic
TAATGTTAGCCATCTTGATA+GGG 0.562447 8_3:+1357687 Msa1268360:CDS
TCATGAACTAAGGACACCTA+TGG 0.568676 8_3:+1360438 Msa1268360:CDS
TCATTGAGTAGTTTGGCGTA+TGG 0.569196 8_3:+1357758 Msa1268360:CDS
GCACAATGGAAGCATCTGAA+TGG 0.570506 8_3:+1362678 Msa1268360:CDS
ATGGAAGCATCTGAATGGAA+TGG 0.570666 8_3:+1362683 Msa1268360:CDS
AAGAAAGTATATCATGGGAC+AGG 0.570703 8_3:+1359945 Msa1268360:CDS
TGTTGTTCTGTGACATCCAT+TGG 0.570801 8_3:-1362417 None:intergenic
TGCAACACAAGCTTATGATA+GGG 0.572109 8_3:+1363309 Msa1268360:CDS
TAAGTCAACTTGAAGCAAGA+AGG 0.572906 8_3:+1360100 Msa1268360:CDS
CCAATATGTTGTTAAGAAGA+CGG 0.575002 8_3:-1360564 None:intergenic
AGATACACCAGTAATTCAAA+GGG 0.575176 8_3:+1363399 Msa1268360:CDS
AAGACTGAGCTTCGTCGGAA+AGG 0.575868 8_3:+1362980 Msa1268360:CDS
GAAGATTTGATCAACATAGC+AGG 0.577289 8_3:+1358881 Msa1268360:CDS
AAATTAGTTAGAGGTGACTC+TGG 0.577940 8_3:+1361130 Msa1268360:CDS
ATCTCAAGCTGAGCAAGTTG+AGG 0.579080 8_3:+1357907 Msa1268360:CDS
GTCATGTTATTCTGCGAGGA+TGG 0.580292 8_3:+1361371 Msa1268360:CDS
TCAAGTTCAAGGTCTCCAAT+GGG 0.580482 8_3:+1357344 Msa1268360:exon
AAAGTATATCATGGGACAGG+TGG 0.583109 8_3:+1359948 Msa1268360:CDS
ACCAAAGCTTAAGATGGCTG+TGG 0.586674 8_3:+1359180 Msa1268360:CDS
ATACCAAGAAAGTATATCAT+GGG 0.587306 8_3:+1359940 Msa1268360:CDS
ATGTTGAGAATGCTAAGCTA+GGG 0.588292 8_3:+1359290 Msa1268360:CDS
TCGGAAGAGCAAAATTTGTG+TGG 0.588656 8_3:+1362927 Msa1268360:CDS
GGTCAATAGCCCTATCAAGA+TGG 0.588935 8_3:-1357696 None:intergenic
GAAGCCAAATGCCTTAAGGT+TGG 0.589210 8_3:+1364144 Msa1268360:CDS
TCAACTTGAAGCAAGAAGGA+AGG 0.590551 8_3:+1360104 Msa1268360:CDS
TGAAGCAAGAAGGAAGGCAG+AGG 0.592213 8_3:+1360110 Msa1268360:CDS
AGAAGATGCAGAATTCGACT+TGG 0.592480 8_3:+1360741 Msa1268360:CDS
ATGATAAGAAATCACTTGAA+GGG 0.595276 8_3:+1363356 Msa1268360:CDS
GGTTGCATCAACCTCAAACA+TGG 0.597197 8_3:+1358727 Msa1268360:CDS
TGGCAGGTTAATAAGATGGG+TGG 0.597564 8_3:+1362327 Msa1268360:intron
GAAGATGATATAATAAGACT+TGG 0.598140 8_3:+1359208 Msa1268360:CDS
AATTGAGAATCATACCAGAA+AGG 0.600279 8_3:-1360837 None:intergenic
ATTTGGAAGAAAATAATCCA+AGG 0.600592 8_3:+1363236 Msa1268360:CDS
AAGCAATGAGGGCAGTAACA+TGG 0.603356 8_3:+1358570 Msa1268360:CDS
GAACCACTTGATCCTGTCAC+AGG 0.609145 8_3:+1358824 Msa1268360:CDS
TGGTTTGAAGTTGAGGACAC+AGG 0.609745 8_3:+1361535 Msa1268360:CDS
GCAGCTATATGAAGCAATGA+GGG 0.611384 8_3:+1358559 Msa1268360:intron
TAGAAGAGAGTCTCTCCAGA+AGG 0.615474 8_3:+1363525 Msa1268360:CDS
TTAGTCGAATTTGTAAGTAA+CGG 0.616052 8_3:-1359151 None:intergenic
CAAATGCCTTAAGGTTGGCA+TGG 0.617547 8_3:+1364149 Msa1268360:CDS
TCGCCTGTGACAGGATCAAG+TGG 0.620643 8_3:-1358827 None:intergenic
GGTAAAGCTGCCGAAAGCAA+AGG 0.621545 8_3:-1358968 None:intergenic
AAAAGCAATAAGGAAATCAG+AGG 0.621819 8_3:+1364062 Msa1268360:CDS
TTCATCACAAGACATTGCAT+GGG 0.622262 8_3:-1364124 None:intergenic
GCAATAAGGAAATCAGAGGA+AGG 0.623445 8_3:+1364066 Msa1268360:CDS
TTTGGAAGAAAATAATCCAA+GGG 0.626055 8_3:+1363237 Msa1268360:CDS
GGCTATTGACCATATTAACA+TGG 0.629966 8_3:+1357708 Msa1268360:CDS
AGCAGCTATATGAAGCAATG+AGG 0.636477 8_3:+1358558 Msa1268360:intron
CAACATATTGGATCTGAGCA+AGG 0.636910 8_3:+1360576 Msa1268360:CDS
TTTACTTATTTCAGGCATGG+AGG 0.638874 8_3:+1362005 Msa1268360:intron
GAGTTAGTTGAGATGCATAG+TGG 0.639051 8_3:+1359073 Msa1268360:CDS
AGTTAGAGGTGACTCTGGCA+GGG 0.641913 8_3:+1361135 Msa1268360:CDS
GAAGATGCAGAATTCGACTT+GGG 0.643061 8_3:+1360742 Msa1268360:CDS
TAGAGGTGACTCTGGCAGGG+TGG 0.646259 8_3:+1361138 Msa1268360:CDS
GGACTTTCACAAGTTCCGGA+TGG 0.648808 8_3:+1358902 Msa1268360:CDS
GTTTGAGGTTGATGCAACCA+TGG 0.651337 8_3:-1358723 None:intergenic
GTAGAATAATAACATCGAAG+TGG 0.676676 8_3:+1362636 Msa1268360:CDS
TAATAAGACTTGGAGCTGAG+TGG 0.679941 8_3:+1359218 Msa1268360:CDS
GCTGGTCATGTTATTCTGCG+AGG 0.686581 8_3:+1361367 Msa1268360:intron
AAGAAAAGTAACTCACCAAG+AGG 0.687749 8_3:+1357419 Msa1268360:CDS
AGGTGATGGACAACAAGCAG+TGG 0.694466 8_3:+1363468 Msa1268360:CDS
AAGCTTATGATAGGGTGACA+AGG 0.699339 8_3:+1363317 Msa1268360:CDS
ATGTATTTGACTTCTCAACA+AGG 0.699506 8_3:+1359100 Msa1268360:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TGAATTTAATAAAATTTTAG+AGG - chr8_3:1357584-1357603 None:intergenic 10.0%
!! ATCTTAATAAAAGATAAATA+TGG + chr8_3:1357623-1357642 Msa1268360:intron 10.0%
!!! ATTTTAAATATCTATGATAT+TGG + chr8_3:1358041-1358060 Msa1268360:intron 10.0%
!!! TTTTATTTTTTTGATAAGAT+TGG + chr8_3:1358112-1358131 Msa1268360:intron 10.0%
!! TTTAATATTGTAAAAAATTG+CGG - chr8_3:1359571-1359590 None:intergenic 10.0%
!!! TTATTTTTAAAAATTGTTAC+TGG + chr8_3:1360284-1360303 Msa1268360:intron 10.0%
!!! TATATACATTTATTTCTATT+AGG - chr8_3:1364402-1364421 None:intergenic 10.0%
!! ATAAAAGATAAATATGGATT+TGG + chr8_3:1357629-1357648 Msa1268360:intron 15.0%
!!! AATAATATTTTGTTTTATGC+AGG + chr8_3:1357664-1357683 Msa1268360:intron 15.0%
!!! TTCTTCTAATAAAAGTATTA+TGG + chr8_3:1359000-1359019 Msa1268360:CDS 15.0%
!! CTATTAATAATTATTACCAA+AGG - chr8_3:1359364-1359383 None:intergenic 15.0%
!! TAAAACAGAAATTAAATAGA+GGG - chr8_3:1359866-1359885 None:intergenic 15.0%
!! TTAAAACAGAAATTAAATAG+AGG - chr8_3:1359867-1359886 None:intergenic 15.0%
!!! TTCATGAAATGTAAATTTTA+AGG - chr8_3:1361573-1361592 None:intergenic 15.0%
!!! ACTTATTTTATTTTGACAAA+AGG - chr8_3:1361602-1361621 None:intergenic 15.0%
!! AACAATAATAATGAGATAAA+AGG - chr8_3:1362304-1362323 None:intergenic 15.0%
!!! TTTTATCTCATTATTATTGT+TGG + chr8_3:1362303-1362322 Msa1268360:intron 15.0%
!! AGAAATAAATGTATATAGAA+AGG + chr8_3:1364405-1364424 Msa1268360:three_prime_UTR 15.0%
!! AATGATAATTAAGTCAGTTA+TGG + chr8_3:1357998-1358017 Msa1268360:intron 20.0%
!! ATAACAATCAATTACAAGAA+TGG + chr8_3:1358626-1358645 Msa1268360:CDS 20.0%
!!! CGTGCTTTTAAAATATTTTT+AGG + chr8_3:1359387-1359406 Msa1268360:intron 20.0%
!!! AGACATTTTGTAAAAAATTG+CGG - chr8_3:1359515-1359534 None:intergenic 20.0%
!!! TTCACTTTAAAATTGAGAAA+AGG + chr8_3:1359594-1359613 Msa1268360:intron 20.0%
!!! GTATACTAGTTTTACAAAAT+TGG + chr8_3:1359684-1359703 Msa1268360:intron 20.0%
!!! TTTTACAAAATTGGATTATC+TGG + chr8_3:1359693-1359712 Msa1268360:intron 20.0%
!! ATGAACAAACAATTCATTAT+AGG - chr8_3:1360375-1360394 None:intergenic 20.0%
!!! TTTTTTATTATGTGTGCAAT+TGG - chr8_3:1360654-1360673 None:intergenic 20.0%
!! TCATTTGTTCAAATTATAAC+CGG - chr8_3:1360927-1360946 None:intergenic 20.0%
!!! TAGACTTTAATTTCAATGAA+AGG + chr8_3:1361029-1361048 Msa1268360:intron 20.0%
!! TTCTGATCAAGATAAAAATT+CGG - chr8_3:1361427-1361446 None:intergenic 20.0%
!!! AGATCATACAATTGAAATTT+TGG + chr8_3:1361835-1361854 Msa1268360:intron 20.0%
!! AAAAAAATTCACATTTCCTT+TGG + chr8_3:1362166-1362185 Msa1268360:intron 20.0%
!! GAAATTTAAGGATAACAAAT+AGG + chr8_3:1362559-1362578 Msa1268360:intron 20.0%
!! TTAAATCCTTCAAGATTTAT+TGG - chr8_3:1362785-1362804 None:intergenic 20.0%
!!! AGCAAAAATGATTCATATTT+TGG + chr8_3:1363036-1363055 Msa1268360:CDS 20.0%
!! AACAATAATGCTTGAAAAAA+TGG + chr8_3:1363426-1363445 Msa1268360:CDS 20.0%
!! ACAATAATGCTTGAAAAAAT+GGG + chr8_3:1363427-1363446 Msa1268360:CDS 20.0%
!! TTTGGATAAATAGTTTAATC+AGG + chr8_3:1363718-1363737 Msa1268360:intron 20.0%
!! ATATAAAATTACACTTGTGT+TGG + chr8_3:1363766-1363785 Msa1268360:intron 20.0%
!!! AAGTCAAATTATTTTCATAC+AGG + chr8_3:1363903-1363922 Msa1268360:intron 20.0%
!! GATATAAAAAAGTTACCTAT+TGG - chr8_3:1363954-1363973 None:intergenic 20.0%
!! ATATCTAATAAGTGAATATC+AGG + chr8_3:1363969-1363988 Msa1268360:intron 20.0%
! ACATGTTTAATAGACTATTC+AGG + chr8_3:1357381-1357400 Msa1268360:CDS 25.0%
! GAAAAAATCATTGAGTAGTT+TGG + chr8_3:1357751-1357770 Msa1268360:CDS 25.0%
! CAAAAGGACTAATGTAATTA+AGG - chr8_3:1358071-1358090 None:intergenic 25.0%
!!! TTACATTAGTCCTTTTGATT+TGG + chr8_3:1358074-1358093 Msa1268360:intron 25.0%
! ACTAAATTGACCAAATCAAA+AGG - chr8_3:1358087-1358106 None:intergenic 25.0%
! ATAATATAGCACTATCTTAG+TGG + chr8_3:1358274-1358293 Msa1268360:intron 25.0%
!!! TGAAATTTTTCAATCATGCT+AGG + chr8_3:1358419-1358438 Msa1268360:intron 25.0%
!! ATCCTAACCAATTTTTGTTA+TGG + chr8_3:1358516-1358535 Msa1268360:intron 25.0%
! ATCCATAACAAAAATTGGTT+AGG - chr8_3:1358521-1358540 None:intergenic 25.0%
!! TGTTATCTTTTAGATCTCTA+TGG - chr8_3:1358667-1358686 None:intergenic 25.0%
! TTAGTCGAATTTGTAAGTAA+CGG - chr8_3:1359154-1359173 None:intergenic 25.0%
! GAAGATGATATAATAAGACT+TGG + chr8_3:1359208-1359227 Msa1268360:CDS 25.0%
!!! TTTTTTACAAAATGTCTCCA+TGG + chr8_3:1359518-1359537 Msa1268360:intron 25.0%
!! ATACCAAGAAAGTATATCAT+GGG + chr8_3:1359940-1359959 Msa1268360:CDS 25.0%
!! TCTTTATGCATTTTTGTCAT+TGG + chr8_3:1360012-1360031 Msa1268360:CDS 25.0%
!!! TGCATTTTGATATTGACAAA+TGG + chr8_3:1360042-1360061 Msa1268360:CDS 25.0%
!! AGTATTTAATTTAGAGAGCA+AGG + chr8_3:1360229-1360248 Msa1268360:intron 25.0%
! TTGAATGTAAACAAATGTGT+CGG - chr8_3:1360258-1360277 None:intergenic 25.0%
!! TTGTTCATAAATTAGCTTCA+TGG + chr8_3:1360387-1360406 Msa1268360:intron 25.0%
!!! CTTCATGGTTTTTTTTTTCT+TGG + chr8_3:1360402-1360421 Msa1268360:intron 25.0%
! CCTATATAGTGTAAAACATT+AGG - chr8_3:1360699-1360718 None:intergenic 25.0%
!! CCTAATGTTTTACACTATAT+AGG + chr8_3:1360696-1360715 Msa1268360:intron 25.0%
!! AATGTTTTACACTATATAGG+TGG + chr8_3:1360699-1360718 Msa1268360:intron 25.0%
! TTAAATGTAATCGTATGTGT+TGG + chr8_3:1360952-1360971 Msa1268360:intron 25.0%
! TCTGCATGAAAAATAGTTAT+TGG - chr8_3:1361100-1361119 None:intergenic 25.0%
! TATGTTCTAGTATAGTTACT+TGG + chr8_3:1361224-1361243 Msa1268360:intron 25.0%
! AAACAAATGTGATTTATTCG+TGG - chr8_3:1361625-1361644 None:intergenic 25.0%
! TTTGTTTATTTCCTATGTTG+TGG + chr8_3:1361638-1361657 Msa1268360:intron 25.0%
! ATGTATATAGTCAATGATCT+CGG + chr8_3:1361802-1361821 Msa1268360:intron 25.0%
! GTAAGAAAAAACAAACATTG+AGG - chr8_3:1361954-1361973 None:intergenic 25.0%
! ATCTCATTATTATTGTTGGA+TGG + chr8_3:1362307-1362326 Msa1268360:intron 25.0%
! CTAAAAGCAAGAGAAATTTA+AGG + chr8_3:1362547-1362566 Msa1268360:intron 25.0%
!! CATCAAAGTTGTTATTGTTA+TGG - chr8_3:1362754-1362773 None:intergenic 25.0%
! CATTATCCAATAAATCTTGA+AGG + chr8_3:1362776-1362795 Msa1268360:CDS 25.0%
! TCAACAACAATGACAAAAAT+TGG - chr8_3:1362842-1362861 None:intergenic 25.0%
!!! ATCATTTTTGCTTTGTATAG+AGG - chr8_3:1363028-1363047 None:intergenic 25.0%
! CAAAAGAAAAACATGAAAGA+GGG + chr8_3:1363091-1363110 Msa1268360:CDS 25.0%
!!! TCATCGGTTAACTTTAAAAT+TGG - chr8_3:1363208-1363227 None:intergenic 25.0%
!! TTCCAAATGTTCATTTTCAT+CGG - chr8_3:1363224-1363243 None:intergenic 25.0%
! ATTTGGAAGAAAATAATCCA+AGG + chr8_3:1363236-1363255 Msa1268360:CDS 25.0%
! TTTGGAAGAAAATAATCCAA+GGG + chr8_3:1363237-1363256 Msa1268360:CDS 25.0%
! AATGATAAGAAATCACTTGA+AGG + chr8_3:1363355-1363374 Msa1268360:CDS 25.0%
! ATGATAAGAAATCACTTGAA+GGG + chr8_3:1363356-1363375 Msa1268360:CDS 25.0%
! TTAGGATCAAATCATATTGA+TGG - chr8_3:1363588-1363607 None:intergenic 25.0%
! TCAATATGATTTGATCCTAA+TGG + chr8_3:1363588-1363607 Msa1268360:CDS 25.0%
! TTACAACTATGTACATTTCT+AGG - chr8_3:1364247-1364266 None:intergenic 25.0%
CTTTATGTTCATCAAGTTCA+AGG + chr8_3:1357333-1357352 Msa1268360:five_prime_UTR 30.0%
TACCTATATTTATTGCCCAT+TGG - chr8_3:1357362-1357381 None:intergenic 30.0%
! TATTCAGGTTTACCAATTCA+TGG + chr8_3:1357396-1357415 Msa1268360:CDS 30.0%
!!! GTTACTTTTCTTCCATGAAT+TGG - chr8_3:1357411-1357430 None:intergenic 30.0%
TAATGTTAGCCATCTTGATA+GGG + chr8_3:1357687-1357706 Msa1268360:CDS 30.0%
TGTGAAATGCCATGTTAATA+TGG - chr8_3:1357720-1357739 None:intergenic 30.0%
ATATTCCACATCCTCAAAAT+CGG - chr8_3:1357809-1357828 None:intergenic 30.0%
TAAGTCAGTTATGGCTAAAT+TGG + chr8_3:1358007-1358026 Msa1268360:intron 30.0%
!! ATTTGTCTCTGAAATAGTAG+AGG - chr8_3:1358243-1358262 None:intergenic 30.0%
AGGTTGAATTGATGAAATTC+AGG + chr8_3:1358439-1358458 Msa1268360:intron 30.0%
GGTTGAATTGATGAAATTCA+GGG + chr8_3:1358440-1358459 Msa1268360:intron 30.0%
AGGACATCCATAACAAAAAT+TGG - chr8_3:1358526-1358545 None:intergenic 30.0%
AGATCTTTCAAATTACTCCA+TGG + chr8_3:1358706-1358725 Msa1268360:CDS 30.0%
! ATGGTAACTTTTCAGCAATT+TGG + chr8_3:1358795-1358814 Msa1268360:CDS 30.0%
TTATTAGAAGAATCCCAAAC+AGG - chr8_3:1358992-1359011 None:intergenic 30.0%
!! AAAAGTATTATGGCTGTTGT+TGG + chr8_3:1359010-1359029 Msa1268360:CDS 30.0%
! ACAACTGCATTTTATAGTGT+TGG + chr8_3:1359037-1359056 Msa1268360:CDS 30.0%
! ATGTATTTGACTTCTCAACA+AGG + chr8_3:1359100-1359119 Msa1268360:CDS 30.0%
!!! ATATTTTTAGGTGATCACCA+AGG + chr8_3:1359399-1359418 Msa1268360:intron 30.0%
GAGGATCTTATATAAAACCT+TGG - chr8_3:1359419-1359438 None:intergenic 30.0%
AAGATCCTCAACTTTGATTA+TGG + chr8_3:1359430-1359449 Msa1268360:intron 30.0%
GATTATGGTTGCAATGATTA+AGG + chr8_3:1359445-1359464 Msa1268360:intron 30.0%
GTTCAATGAAGATTCATTGT+CGG - chr8_3:1359764-1359783 None:intergenic 30.0%
TCATTGAACTCTTTAAACTC+TGG + chr8_3:1359775-1359794 Msa1268360:intron 30.0%
TCTATTAAGCATAAAGTTGC+AGG + chr8_3:1359827-1359846 Msa1268360:intron 30.0%
TTACGTCGTAACAAAATGAT+TGG - chr8_3:1359894-1359913 None:intergenic 30.0%
! CATACCAAGAAAGTATATCA+TGG + chr8_3:1359939-1359958 Msa1268360:CDS 30.0%
TGAGAGATCTTTCAAAACAT+TGG + chr8_3:1359972-1359991 Msa1268360:CDS 30.0%
AAATAAACCTCATGTTTGCA+AGG - chr8_3:1360161-1360180 None:intergenic 30.0%
ATTCATTATAGGACATGACA+CGG - chr8_3:1360364-1360383 None:intergenic 30.0%
CCAATATGTTGTTAAGAAGA+CGG - chr8_3:1360567-1360586 None:intergenic 30.0%
AATTGAGAATCATACCAGAA+AGG - chr8_3:1360840-1360859 None:intergenic 30.0%
TTCTGGTATGATTCTCAATT+TGG + chr8_3:1360840-1360859 Msa1268360:intron 30.0%
TGTTCAAATTATAACCGGTA+TGG - chr8_3:1360922-1360941 None:intergenic 30.0%
GATATGCCAAAATTAGTTAG+AGG + chr8_3:1361121-1361140 Msa1268360:CDS 30.0%
! TTACTTGGTAGTTACAATAG+TGG + chr8_3:1361239-1361258 Msa1268360:intron 30.0%
TATTGTAAATGCATTACAGC+TGG + chr8_3:1361349-1361368 Msa1268360:intron 30.0%
GAGATAACAAAGTGATACTT+TGG + chr8_3:1361515-1361534 Msa1268360:CDS 30.0%
TATTTCCTATGTTGTGGTAT+AGG + chr8_3:1361644-1361663 Msa1268360:intron 30.0%
CTGAATCCTTTACTTATTTC+AGG + chr8_3:1361997-1362016 Msa1268360:intron 30.0%
! TTTTAGACCTAGTTTACCAA+AGG - chr8_3:1362185-1362204 None:intergenic 30.0%
!!! TGATTGTGTGATTGTTTTTG+AGG + chr8_3:1362257-1362276 Msa1268360:intron 30.0%
AGAAATCAAGGTTACCAAAA+AGG + chr8_3:1362350-1362369 Msa1268360:CDS 30.0%
! GCTTTAAATTTGACAGACAA+TGG + chr8_3:1362444-1362463 Msa1268360:CDS 30.0%
TAAATACTAAGTGTGAATGC+AGG + chr8_3:1362586-1362605 Msa1268360:intron 30.0%
GTAGAATAATAACATCGAAG+TGG + chr8_3:1362636-1362655 Msa1268360:CDS 30.0%
!! ATGGACTAACACAAATTTTG+AGG + chr8_3:1362702-1362721 Msa1268360:CDS 30.0%
! TGGACTAACACAAATTTTGA+GGG + chr8_3:1362703-1362722 Msa1268360:CDS 30.0%
TACTAAGCATCAAAGATATG+AGG + chr8_3:1362813-1362832 Msa1268360:CDS 30.0%
! TTTGTCATTGTTGTTGACAT+TGG + chr8_3:1362845-1362864 Msa1268360:CDS 30.0%
TTGACTTAAGCACAGATATA+TGG + chr8_3:1362873-1362892 Msa1268360:CDS 30.0%
AACTTCCTTCACAAGTATTT+CGG + chr8_3:1362908-1362927 Msa1268360:CDS 30.0%
GCAAAAGAAAAACATGAAAG+AGG + chr8_3:1363090-1363109 Msa1268360:CDS 30.0%
AACCGATGAAAATGAACATT+TGG + chr8_3:1363219-1363238 Msa1268360:CDS 30.0%
AAGATACACCAGTAATTCAA+AGG + chr8_3:1363398-1363417 Msa1268360:CDS 30.0%
AGATACACCAGTAATTCAAA+GGG + chr8_3:1363399-1363418 Msa1268360:CDS 30.0%
AGTGGATGCTCTTAATTATA+TGG + chr8_3:1363486-1363505 Msa1268360:CDS 30.0%
!! ATCTTGTATTTTTGTCCTTC+TGG - chr8_3:1363543-1363562 None:intergenic 30.0%
TGAACCAGAATAACAGTATT+AGG + chr8_3:1363622-1363641 Msa1268360:intron 30.0%
AAGTCCTAATACTGTTATTC+TGG - chr8_3:1363629-1363648 None:intergenic 30.0%
CTTGTGAAATTGTTTGACAT+AGG + chr8_3:1363690-1363709 Msa1268360:intron 30.0%
! TTATCAAGTATTGCTCCAAT+AGG + chr8_3:1363936-1363955 Msa1268360:intron 30.0%
TAATGCTTTATCTGTGTTTG+TGG + chr8_3:1364002-1364021 Msa1268360:intron 30.0%
AAAAGCAATAAGGAAATCAG+AGG + chr8_3:1364062-1364081 Msa1268360:CDS 30.0%
! TATGTACATTTCTAGGTTGT+TGG - chr8_3:1364240-1364259 None:intergenic 30.0%
AGTTCACTAGTATCAGTAAA+CGG + chr8_3:1364296-1364315 Msa1268360:three_prime_UTR 30.0%
ATATGATTGCACTTTGTTGA+AGG + chr8_3:1364346-1364365 Msa1268360:three_prime_UTR 30.0%
CTCCAATGGGCAATAAATAT+AGG + chr8_3:1357357-1357376 Msa1268360:exon 35.0%
AAGAAAAGTAACTCACCAAG+AGG + chr8_3:1357419-1357438 Msa1268360:CDS 35.0%
TGGAAAATTCTTCTACCTCT+TGG - chr8_3:1357437-1357456 None:intergenic 35.0%
!!! CTTCTTTTTCAACATCTCTG+TGG - chr8_3:1357457-1357476 None:intergenic 35.0%
!! ATCCTACTACAGTGTTTTTG+TGG + chr8_3:1357508-1357527 Msa1268360:CDS 35.0%
AACCACAAAAACACTGTAGT+AGG - chr8_3:1357513-1357532 None:intergenic 35.0%
TGTGGTTAGATTAGCAATCA+TGG + chr8_3:1357526-1357545 Msa1268360:CDS 35.0%
GTAATGTTAGCCATCTTGAT+AGG + chr8_3:1357686-1357705 Msa1268360:CDS 35.0%
GGCTATTGACCATATTAACA+TGG + chr8_3:1357708-1357727 Msa1268360:CDS 35.0%
!! TTCTGAAATTACAACAGCTC+AGG + chr8_3:1357841-1357860 Msa1268360:CDS 35.0%
TAGCTGCTACAAATAAAAGC+AGG - chr8_3:1358546-1358565 None:intergenic 35.0%
TGGGATGACAAAACAATTCA+TGG + chr8_3:1358776-1358795 Msa1268360:CDS 35.0%
GCTATGTTGATCAAATCTTC+TGG - chr8_3:1358881-1358900 None:intergenic 35.0%
GAAGATTTGATCAACATAGC+AGG + chr8_3:1358881-1358900 Msa1268360:CDS 35.0%
! TTTTCCTAATTCAACTCGTG+AGG + chr8_3:1359264-1359283 Msa1268360:CDS 35.0%
ATGTTGAGAATGCTAAGCTA+GGG + chr8_3:1359290-1359309 Msa1268360:CDS 35.0%
! AAGGAAGTCTCTTCAAGTTT+AGG - chr8_3:1359345-1359364 None:intergenic 35.0%
AAACTTGAAGAGACTTCCTT+TGG + chr8_3:1359345-1359364 Msa1268360:CDS 35.0%
TGCAACCATAATCAAAGTTG+AGG - chr8_3:1359438-1359457 None:intergenic 35.0%
TTAAGGTTCTTATGTCTCCA+TGG + chr8_3:1359462-1359481 Msa1268360:intron 35.0%
TTGAACTCTTTAAACTCTGG+TGG + chr8_3:1359778-1359797 Msa1268360:intron 35.0%
TGTCCCATGATATACTTTCT+TGG - chr8_3:1359946-1359965 None:intergenic 35.0%
! AAGAAAGTATATCATGGGAC+AGG + chr8_3:1359945-1359964 Msa1268360:CDS 35.0%
! ATTGACAAATGGAGTGTCAA+AGG + chr8_3:1360053-1360072 Msa1268360:CDS 35.0%
TAAGTCAACTTGAAGCAAGA+AGG + chr8_3:1360100-1360119 Msa1268360:CDS 35.0%
AATGTAAACAAATGTGTCGG+TGG - chr8_3:1360255-1360274 None:intergenic 35.0%
TGTATGACAGTCATGAACTA+AGG + chr8_3:1360428-1360447 Msa1268360:intron 35.0%
CCGTCTTCTTAACAACATAT+TGG + chr8_3:1360564-1360583 Msa1268360:CDS 35.0%
! GAGTCACCTCTAACTAATTT+TGG - chr8_3:1361130-1361149 None:intergenic 35.0%
AAATTAGTTAGAGGTGACTC+TGG + chr8_3:1361130-1361149 Msa1268360:CDS 35.0%
!! GATACTTTGGTTTGAAGTTG+AGG + chr8_3:1361528-1361547 Msa1268360:CDS 35.0%
ATTTCTACAGTCATTGCAGT+CGG - chr8_3:1361924-1361943 None:intergenic 35.0%
TCCTTTACTTATTTCAGGCA+TGG + chr8_3:1362002-1362021 Msa1268360:intron 35.0%
TCCATGCCTGAAATAAGTAA+AGG - chr8_3:1362006-1362025 None:intergenic 35.0%
TTTACTTATTTCAGGCATGG+AGG + chr8_3:1362005-1362024 Msa1268360:intron 35.0%
TTACTTATTTCAGGCATGGA+GGG + chr8_3:1362006-1362025 Msa1268360:intron 35.0%
CACATTTCCTTTGGTAAACT+AGG + chr8_3:1362175-1362194 Msa1268360:intron 35.0%
CATTATTATTGTTGGATGGC+AGG + chr8_3:1362311-1362330 Msa1268360:intron 35.0%
AATCAAGGTTACCAAAAAGG+AGG + chr8_3:1362353-1362372 Msa1268360:CDS 35.0%
ATCAAGGTTACCAAAAAGGA+GGG + chr8_3:1362354-1362373 Msa1268360:CDS 35.0%
TTTGCTTCTTAGTGTACCAA+TGG + chr8_3:1362401-1362420 Msa1268360:CDS 35.0%
TCGAAGTGGTTAACCAAAAA+AGG + chr8_3:1362650-1362669 Msa1268360:CDS 35.0%
CGAAGTGGTTAACCAAAAAA+GGG + chr8_3:1362651-1362670 Msa1268360:CDS 35.0%
GAAGTGGTTAACCAAAAAAG+GGG + chr8_3:1362652-1362671 Msa1268360:CDS 35.0%
!! TTTAGCTTTGTTGTCTTCAG+AGG - chr8_3:1363278-1363297 None:intergenic 35.0%
TTGCAACACAAGCTTATGAT+AGG + chr8_3:1363308-1363327 Msa1268360:CDS 35.0%
TGCAACACAAGCTTATGATA+GGG + chr8_3:1363309-1363328 Msa1268360:CDS 35.0%
AGAAATCACTTGAAGGGTTA+AGG + chr8_3:1363362-1363381 Msa1268360:CDS 35.0%
!! TTTGATCCTAATGGATTGTC+AGG + chr8_3:1363597-1363616 Msa1268360:CDS 35.0%
TTCATACCTGACAATCCATT+AGG - chr8_3:1363606-1363625 None:intergenic 35.0%
ACGCATTTGAGCTTATTTAC+TGG + chr8_3:1363659-1363678 Msa1268360:intron 35.0%
TGTTTGACATAGGTCATGTT+TGG + chr8_3:1363700-1363719 Msa1268360:intron 35.0%
! AAAATTACACTTGTGTTGGC+CGG + chr8_3:1363770-1363789 Msa1268360:intron 35.0%
GGAAAATTAGATGCCAAAGA+TGG + chr8_3:1364023-1364042 Msa1268360:intron 35.0%
AATTAGATGCCAAAGATGGA+TGG + chr8_3:1364027-1364046 Msa1268360:intron 35.0%
ATGAGGCAACAAAAGCAATA+AGG + chr8_3:1364052-1364071 Msa1268360:CDS 35.0%
TTCATCACAAGACATTGCAT+GGG - chr8_3:1364127-1364146 None:intergenic 35.0%
ACCATAAGCTTGAAGTCAAT+TGG - chr8_3:1364192-1364211 None:intergenic 35.0%
TGATACTAGTGAACTCAGTA+AGG - chr8_3:1364291-1364310 None:intergenic 35.0%
ATCAAGTTCAAGGTCTCCAA+TGG + chr8_3:1357343-1357362 Msa1268360:exon 40.0%
TCAAGTTCAAGGTCTCCAAT+GGG + chr8_3:1357344-1357363 Msa1268360:exon 40.0%
GACAGTGACTACTAGCATAT+TGG - chr8_3:1357484-1357503 None:intergenic 40.0%
TCATTGAGTAGTTTGGCGTA+TGG + chr8_3:1357758-1357777 Msa1268360:CDS 40.0%
AGCAGCTATATGAAGCAATG+AGG + chr8_3:1358558-1358577 Msa1268360:intron 40.0%
GCAGCTATATGAAGCAATGA+GGG + chr8_3:1358559-1358578 Msa1268360:intron 40.0%
! CCAAGCTTGATGAGTTGAAA+GGG - chr8_3:1358759-1358778 None:intergenic 40.0%
CCTTTCAACTCATCAAGCTT+GGG + chr8_3:1358757-1358776 Msa1268360:CDS 40.0%
TACAGATTCGCCTTTGCTTT+CGG + chr8_3:1358958-1358977 Msa1268360:CDS 40.0%
GAGTTAGTTGAGATGCATAG+TGG + chr8_3:1359073-1359092 Msa1268360:CDS 40.0%
TAATAAGACTTGGAGCTGAG+TGG + chr8_3:1359218-1359237 Msa1268360:CDS 40.0%
AGTGGTTGCAGAGAACTTAT+GGG + chr8_3:1359236-1359255 Msa1268360:CDS 40.0%
! TGAACCTCACGAGTTGAATT+AGG - chr8_3:1359271-1359290 None:intergenic 40.0%
CATGTTGAGAATGCTAAGCT+AGG + chr8_3:1359289-1359308 Msa1268360:CDS 40.0%
ATATGACTGATGTCTCGACA+AGG - chr8_3:1359488-1359507 None:intergenic 40.0%
ATATGACTGATGTCTCGACA+AGG - chr8_3:1359488-1359507 None:intergenic 40.0%
AACTCTTTAAACTCTGGTGG+TGG + chr8_3:1359781-1359800 Msa1268360:intron 40.0%
TTACGACGTAAACTTTGTGC+AGG + chr8_3:1359903-1359922 Msa1268360:intron 40.0%
AAAGTATATCATGGGACAGG+TGG + chr8_3:1359948-1359967 Msa1268360:CDS 40.0%
TCAACTTGAAGCAAGAAGGA+AGG + chr8_3:1360104-1360123 Msa1268360:CDS 40.0%
GTCAATTCCTTGCAAACATG+AGG + chr8_3:1360151-1360170 Msa1268360:CDS 40.0%
TCATGAACTAAGGACACCTA+TGG + chr8_3:1360438-1360457 Msa1268360:CDS 40.0%
AATCCAATTACTGCTGCCAT+AGG - chr8_3:1360457-1360476 None:intergenic 40.0%
CAACATATTGGATCTGAGCA+AGG + chr8_3:1360576-1360595 Msa1268360:CDS 40.0%
TATTGGATCTGAGCAAGGTA+TGG + chr8_3:1360581-1360600 Msa1268360:intron 40.0%
TACACTATATAGGTGGAGTC+TGG + chr8_3:1360706-1360725 Msa1268360:intron 40.0%
AGAAGATGCAGAATTCGACT+TGG + chr8_3:1360741-1360760 Msa1268360:CDS 40.0%
GAAGATGCAGAATTCGACTT+GGG + chr8_3:1360742-1360761 Msa1268360:CDS 40.0%
!! GAGACTGTTTTAGACCTTTC+TGG + chr8_3:1360823-1360842 Msa1268360:CDS 40.0%
TCTCAGTGTCAGTACTTCAT+AGG - chr8_3:1360872-1360891 None:intergenic 40.0%
!! ATGAAGTACTGACACTGAGA+CGG + chr8_3:1360872-1360891 Msa1268360:intron 40.0%
CAACACTGAAATGTCCATAC+CGG + chr8_3:1360905-1360924 Msa1268360:intron 40.0%
! CTCTTTGCATGACTTGCATT+TGG - chr8_3:1361484-1361503 None:intergenic 40.0%
CGATACCTATACCACAACAT+AGG - chr8_3:1361652-1361671 None:intergenic 40.0%
!! TAGGTATCGATCCAAGCAAA+TGG + chr8_3:1361663-1361682 Msa1268360:intron 40.0%
!! AGGTATCGATCCAAGCAAAT+GGG + chr8_3:1361664-1361683 Msa1268360:intron 40.0%
AACACAGAATCCCATTTGCT+TGG - chr8_3:1361677-1361696 None:intergenic 40.0%
GCTTACAGTCTAGTAGTTGA+TGG - chr8_3:1361722-1361741 None:intergenic 40.0%
TCTTTGCATCGTTAGGAACT+TGG + chr8_3:1362040-1362059 Msa1268360:CDS 40.0%
TTGGACTGTAGGATCAACAT+CGG - chr8_3:1362224-1362243 None:intergenic 40.0%
GTTGATCCTACAGTCCAAAT+CGG + chr8_3:1362226-1362245 Msa1268360:intron 40.0%
TTGATCCTACAGTCCAAATC+GGG + chr8_3:1362227-1362246 Msa1268360:intron 40.0%
TGGATGGCAGGTTAATAAGA+TGG + chr8_3:1362323-1362342 Msa1268360:intron 40.0%
GGATGGCAGGTTAATAAGAT+GGG + chr8_3:1362324-1362343 Msa1268360:intron 40.0%
TAAGATGGGTGGAGAAATCA+AGG + chr8_3:1362338-1362357 Msa1268360:CDS 40.0%
TGTTGTTCTGTGACATCCAT+TGG - chr8_3:1362420-1362439 None:intergenic 40.0%
TTTGACAGACAATGGCTTAG+TGG + chr8_3:1362452-1362471 Msa1268360:CDS 40.0%
CTTGCACTACAAGGCAATAT+GGG + chr8_3:1362614-1362633 Msa1268360:CDS 40.0%
!! ATGGAAGCATCTGAATGGAA+TGG + chr8_3:1362683-1362702 Msa1268360:CDS 40.0%
CTCTTCCGAAATACTTGTGA+AGG - chr8_3:1362916-1362935 None:intergenic 40.0%
TCGGAAGAGCAAAATTTGTG+TGG + chr8_3:1362927-1362946 Msa1268360:CDS 40.0%
TCGGAAAGGACACTTACTAA+TGG + chr8_3:1362994-1363013 Msa1268360:CDS 40.0%
GTACAAGATTCTTCTTCCCT+TGG - chr8_3:1363256-1363275 None:intergenic 40.0%
AAGCTTATGATAGGGTGACA+AGG + chr8_3:1363317-1363336 Msa1268360:CDS 40.0%
GTTGCAACCCTTTGAATTAC+TGG - chr8_3:1363409-1363428 None:intergenic 40.0%
! CTTTAGAGAAGCACACTTCA+AGG - chr8_3:1363814-1363833 None:intergenic 40.0%
CTTGAAGTGTGCTTCTCTAA+AGG + chr8_3:1363812-1363831 Msa1268360:intron 40.0%
CTAAACTAGCCCACTGAAAT+AGG - chr8_3:1363862-1363881 None:intergenic 40.0%
GCAATAAGGAAATCAGAGGA+AGG + chr8_3:1364066-1364085 Msa1268360:CDS 40.0%
CTTCATCACAAGACATTGCA+TGG - chr8_3:1364128-1364147 None:intergenic 40.0%
TGATGAAGCCAAATGCCTTA+AGG + chr8_3:1364140-1364159 Msa1268360:CDS 40.0%
! GCCAATTGACTTCAAGCTTA+TGG + chr8_3:1364188-1364207 Msa1268360:CDS 40.0%
TGGTTTAGTGAGTGAGAGAA+TGG - chr8_3:1364220-1364239 None:intergenic 40.0%
GGTCAATAGCCCTATCAAGA+TGG - chr8_3:1357699-1357718 None:intergenic 45.0%
! TTCTGCAACGTCCGATTTTG+AGG + chr8_3:1357795-1357814 Msa1268360:CDS 45.0%
!! AACGTCCGATTTTGAGGATG+TGG + chr8_3:1357801-1357820 Msa1268360:CDS 45.0%
ATCTCAAGCTGAGCAAGTTG+AGG + chr8_3:1357907-1357926 Msa1268360:CDS 45.0%
AAGCAATGAGGGCAGTAACA+TGG + chr8_3:1358570-1358589 Msa1268360:CDS 45.0%
!! GTTTGAGGTTGATGCAACCA+TGG - chr8_3:1358726-1358745 None:intergenic 45.0%
GGTTGCATCAACCTCAAACA+TGG + chr8_3:1358727-1358746 Msa1268360:CDS 45.0%
AAGGGACTTGACCATGTTTG+AGG - chr8_3:1358741-1358760 None:intergenic 45.0%
CCCTTTCAACTCATCAAGCT+TGG + chr8_3:1358756-1358775 Msa1268360:CDS 45.0%
! CCCAAGCTTGATGAGTTGAA+AGG - chr8_3:1358760-1358779 None:intergenic 45.0%
CCTGTCACAGGCGAAAAAAT+CGG + chr8_3:1358836-1358855 Msa1268360:CDS 45.0%
AGCAGGACTTTCACAAGTTC+CGG + chr8_3:1358898-1358917 Msa1268360:CDS 45.0%
TTTCGGCAGCTTTACCTGTT+TGG + chr8_3:1358975-1358994 Msa1268360:CDS 45.0%
TTCGGCAGCTTTACCTGTTT+GGG + chr8_3:1358976-1358995 Msa1268360:CDS 45.0%
! ACAGCCATCTTAAGCTTTGG+TGG - chr8_3:1359181-1359200 None:intergenic 45.0%
ACCAAAGCTTAAGATGGCTG+TGG + chr8_3:1359180-1359199 Msa1268360:CDS 45.0%
TCCACAGCCATCTTAAGCTT+TGG - chr8_3:1359184-1359203 None:intergenic 45.0%
GAGTGGTTGCAGAGAACTTA+TGG + chr8_3:1359235-1359254 Msa1268360:CDS 45.0%
GACGTAAACTTTGTGCAGGT+AGG + chr8_3:1359907-1359926 Msa1268360:intron 45.0%
ACACCTATGGCAGCAGTAAT+TGG + chr8_3:1360451-1360470 Msa1268360:CDS 45.0%
!! TCGTATGTGTTGGTGTTGTC+TGG + chr8_3:1360962-1360981 Msa1268360:intron 45.0%
ACTCCTTCAATCTGTCGTGT+CGG + chr8_3:1360987-1361006 Msa1268360:intron 45.0%
GTCATGTTATTCTGCGAGGA+TGG + chr8_3:1361371-1361390 Msa1268360:CDS 45.0%
GGACTATCGTTGCAAGAGTT+TGG - chr8_3:1361406-1361425 None:intergenic 45.0%
! TGGTTTGAAGTTGAGGACAC+AGG + chr8_3:1361535-1361554 Msa1268360:CDS 45.0%
AGTCGGCTGATCTAAATCGT+TGG - chr8_3:1361907-1361926 None:intergenic 45.0%
GTCTAGGTCTTTGCATCGTT+AGG + chr8_3:1362033-1362052 Msa1268360:CDS 45.0%
TGGACTGTAGGATCAACATC+GGG - chr8_3:1362223-1362242 None:intergenic 45.0%
TGATCCTACAGTCCAAATCG+GGG + chr8_3:1362228-1362247 Msa1268360:intron 45.0%
CAATCACACATTCCCCGATT+TGG - chr8_3:1362243-1362262 None:intergenic 45.0%
TGGCAGGTTAATAAGATGGG+TGG + chr8_3:1362327-1362346 Msa1268360:intron 45.0%
GTTACCAAAAAGGAGGGTCA+AGG + chr8_3:1362360-1362379 Msa1268360:CDS 45.0%
! TGTTCCTTGACCCTCCTTTT+TGG - chr8_3:1362367-1362386 None:intergenic 45.0%
! CAGGTATTGCTTGCACTACA+AGG + chr8_3:1362605-1362624 Msa1268360:intron 45.0%
GCTTGCACTACAAGGCAATA+TGG + chr8_3:1362613-1362632 Msa1268360:CDS 45.0%
!!! CATTGTGCACACCCCTTTTT+TGG - chr8_3:1362666-1362685 None:intergenic 45.0%
! CAAAAAAGGGGTGTGCACAA+TGG + chr8_3:1362664-1362683 Msa1268360:CDS 45.0%
!! GCACAATGGAAGCATCTGAA+TGG + chr8_3:1362678-1362697 Msa1268360:CDS 45.0%
CCATAAAGACTGAGCTTCGT+CGG + chr8_3:1362975-1362994 Msa1268360:CDS 45.0%
! GTTGTTGTTGCTGTAGGTGA+TGG + chr8_3:1363454-1363473 Msa1268360:CDS 45.0%
TAGAAGAGAGTCTCTCCAGA+AGG + chr8_3:1363525-1363544 Msa1268360:CDS 45.0%
! TGTGCTTCTCTAAAGGTCTC+AGG + chr8_3:1363819-1363838 Msa1268360:intron 45.0%
GCCAAAGATGGATGGATATG+AGG + chr8_3:1364035-1364054 Msa1268360:CDS 45.0%
GCCTCATATCCATCCATCTT+TGG - chr8_3:1364039-1364058 None:intergenic 45.0%
AGGAAATCAGAGGAAGGAAC+AGG + chr8_3:1364072-1364091 Msa1268360:CDS 45.0%
TGGGCTGTTAGAGCAACAAT+TGG - chr8_3:1364108-1364127 None:intergenic 45.0%
GAAGCCAAATGCCTTAAGGT+TGG + chr8_3:1364144-1364163 Msa1268360:CDS 45.0%
! CATGCCAACCTTAAGGCATT+TGG - chr8_3:1364151-1364170 None:intergenic 45.0%
CAAATGCCTTAAGGTTGGCA+TGG + chr8_3:1364149-1364168 Msa1268360:CDS 45.0%
AAGCATCCATGCCAACCTTA+AGG - chr8_3:1364158-1364177 None:intergenic 45.0%
ACTTGCTCAGCTTGAGATGC+AGG - chr8_3:1357905-1357924 None:intergenic 50.0%
GAACCACTTGATCCTGTCAC+AGG + chr8_3:1358824-1358843 Msa1268360:CDS 50.0%
!!! CCGATTTTTTCGCCTGTGAC+AGG - chr8_3:1358839-1358858 None:intergenic 50.0%
GGACTTTCACAAGTTCCGGA+TGG + chr8_3:1358902-1358921 Msa1268360:CDS 50.0%
TTCCGGATGGTGTAGCTACA+TGG + chr8_3:1358915-1358934 Msa1268360:CDS 50.0%
TGCCATGTAGCTACACCATC+CGG - chr8_3:1358920-1358939 None:intergenic 50.0%
GGTAAAGCTGCCGAAAGCAA+AGG - chr8_3:1358971-1358990 None:intergenic 50.0%
GCCACCACCAAAGCTTAAGA+TGG + chr8_3:1359174-1359193 Msa1268360:CDS 50.0%
! GCCATCTTAAGCTTTGGTGG+TGG - chr8_3:1359178-1359197 None:intergenic 50.0%
TGAAGCAAGAAGGAAGGCAG+AGG + chr8_3:1360110-1360129 Msa1268360:CDS 50.0%
ACTTGGGACGCGAACTTGAA+GGG + chr8_3:1360758-1360777 Msa1268360:CDS 50.0%
TAGTTAGAGGTGACTCTGGC+AGG + chr8_3:1361134-1361153 Msa1268360:CDS 50.0%
AGTTAGAGGTGACTCTGGCA+GGG + chr8_3:1361135-1361154 Msa1268360:CDS 50.0%
GCTGGTCATGTTATTCTGCG+AGG + chr8_3:1361367-1361386 Msa1268360:intron 50.0%
TATTTCAGGCATGGAGGGAC+TGG + chr8_3:1362011-1362030 Msa1268360:intron 50.0%
ACTGTAGGATCAACATCGGG+CGG - chr8_3:1362220-1362239 None:intergenic 50.0%
!! CATTCCCCGATTTGGACTGT+AGG - chr8_3:1362235-1362254 None:intergenic 50.0%
CCGACGAAGCTCAGTCTTTA+TGG - chr8_3:1362978-1362997 None:intergenic 50.0%
AAGACTGAGCTTCGTCGGAA+AGG + chr8_3:1362980-1362999 Msa1268360:CDS 50.0%
! GGAGCTGTTGTTGTTGCTGT+AGG + chr8_3:1363448-1363467 Msa1268360:CDS 50.0%
!! AGGTGATGGACAACAAGCAG+TGG + chr8_3:1363468-1363487 Msa1268360:CDS 50.0%
! ATTACACTTGTGTTGGCCGG+TGG + chr8_3:1363773-1363792 Msa1268360:intron 50.0%
TAGCCCACTGAAATAGGCAC+CGG - chr8_3:1363856-1363875 None:intergenic 50.0%
TCGCCTGTGACAGGATCAAG+TGG - chr8_3:1358830-1358849 None:intergenic 55.0%
CTGATGTCTCGACAAGGCCA+TGG - chr8_3:1359482-1359501 None:intergenic 55.0%
CTGATGTCTCGACAAGGCCA+TGG - chr8_3:1359482-1359501 None:intergenic 55.0%
GACTTGGGACGCGAACTTGA+AGG + chr8_3:1360757-1360776 Msa1268360:CDS 55.0%
! GCACCGACACGACAGATTGA+AGG - chr8_3:1360993-1361012 None:intergenic 55.0%
!! CTGTCGTGTCGGTGCTACAT+AGG + chr8_3:1360998-1361017 Msa1268360:intron 55.0%
GAAGTTGAGGACACAGGCTG+TGG + chr8_3:1361541-1361560 Msa1268360:CDS 55.0%
GTCTCTCAAGCCAACACCAC+CGG - chr8_3:1363792-1363811 None:intergenic 55.0%
GTCTCAGGCTCAATTCTCCC+CGG + chr8_3:1363834-1363853 Msa1268360:intron 55.0%
TCCCCGGTGCCTATTTCAGT+GGG + chr8_3:1363850-1363869 Msa1268360:intron 55.0%
AGCCCACTGAAATAGGCACC+GGG - chr8_3:1363855-1363874 None:intergenic 55.0%
TAGAGGTGACTCTGGCAGGG+TGG + chr8_3:1361138-1361157 Msa1268360:CDS 60.0%
!! AGGCATGGAGGGACTGGTCT+AGG + chr8_3:1362017-1362036 Msa1268360:intron 60.0%
! CTTGTGTTGGCCGGTGGTGT+TGG + chr8_3:1363779-1363798 Msa1268360:intron 60.0%
CTCCCCGGTGCCTATTTCAG+TGG + chr8_3:1363849-1363868 Msa1268360:intron 60.0%
! GCCCACTGAAATAGGCACCG+GGG - chr8_3:1363854-1363873 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr8_3 gene 1357282 1364439 1357282 ID=Msa1268360;Name=Msa1268360
chr8_3 mRNA 1357282 1364439 1357282 ID=Msa1268360-mRNA-1;Parent=Msa1268360;Name=Msa1268360-mRNA-1;_AED=0.08;_eAED=0.08;_QI=80|0.91|0.92|1|1|1|13|191|1178
chr8_3 exon 1357282 1357547 1357282 ID=Msa1268360-mRNA-1:exon:296;Parent=Msa1268360-mRNA-1
chr8_3 exon 1357686 1357928 1357686 ID=Msa1268360-mRNA-1:exon:297;Parent=Msa1268360-mRNA-1
chr8_3 exon 1358560 1359366 1358560 ID=Msa1268360-mRNA-1:exon:298;Parent=Msa1268360-mRNA-1
chr8_3 exon 1359925 1360172 1359925 ID=Msa1268360-mRNA-1:exon:299;Parent=Msa1268360-mRNA-1
chr8_3 exon 1360438 1360597 1360438 ID=Msa1268360-mRNA-1:exon:300;Parent=Msa1268360-mRNA-1
chr8_3 exon 1360718 1360844 1360718 ID=Msa1268360-mRNA-1:exon:301;Parent=Msa1268360-mRNA-1
chr8_3 exon 1361119 1361208 1361119 ID=Msa1268360-mRNA-1:exon:302;Parent=Msa1268360-mRNA-1
chr8_3 exon 1361368 1361562 1361368 ID=Msa1268360-mRNA-1:exon:303;Parent=Msa1268360-mRNA-1
chr8_3 exon 1361666 1361735 1361666 ID=Msa1268360-mRNA-1:exon:304;Parent=Msa1268360-mRNA-1
chr8_3 exon 1362019 1362061 1362019 ID=Msa1268360-mRNA-1:exon:305;Parent=Msa1268360-mRNA-1
chr8_3 exon 1362333 1362473 1362333 ID=Msa1268360-mRNA-1:exon:306;Parent=Msa1268360-mRNA-1
chr8_3 exon 1362608 1363618 1362608 ID=Msa1268360-mRNA-1:exon:307;Parent=Msa1268360-mRNA-1
chr8_3 exon 1364033 1364439 1364033 ID=Msa1268360-mRNA-1:exon:308;Parent=Msa1268360-mRNA-1
chr8_3 five_prime_UTR 1357282 1357361 1357282 ID=Msa1268360-mRNA-1:five_prime_utr;Parent=Msa1268360-mRNA-1
chr8_3 CDS 1357362 1357547 1357362 ID=Msa1268360-mRNA-1:cds;Parent=Msa1268360-mRNA-1
chr8_3 CDS 1357686 1357928 1357686 ID=Msa1268360-mRNA-1:cds;Parent=Msa1268360-mRNA-1
chr8_3 CDS 1358560 1359366 1358560 ID=Msa1268360-mRNA-1:cds;Parent=Msa1268360-mRNA-1
chr8_3 CDS 1359925 1360172 1359925 ID=Msa1268360-mRNA-1:cds;Parent=Msa1268360-mRNA-1
chr8_3 CDS 1360438 1360597 1360438 ID=Msa1268360-mRNA-1:cds;Parent=Msa1268360-mRNA-1
chr8_3 CDS 1360718 1360844 1360718 ID=Msa1268360-mRNA-1:cds;Parent=Msa1268360-mRNA-1
chr8_3 CDS 1361119 1361208 1361119 ID=Msa1268360-mRNA-1:cds;Parent=Msa1268360-mRNA-1
chr8_3 CDS 1361368 1361562 1361368 ID=Msa1268360-mRNA-1:cds;Parent=Msa1268360-mRNA-1
chr8_3 CDS 1361666 1361735 1361666 ID=Msa1268360-mRNA-1:cds;Parent=Msa1268360-mRNA-1
chr8_3 CDS 1362019 1362061 1362019 ID=Msa1268360-mRNA-1:cds;Parent=Msa1268360-mRNA-1
chr8_3 CDS 1362333 1362473 1362333 ID=Msa1268360-mRNA-1:cds;Parent=Msa1268360-mRNA-1
chr8_3 CDS 1362608 1363618 1362608 ID=Msa1268360-mRNA-1:cds;Parent=Msa1268360-mRNA-1
chr8_3 CDS 1364033 1364248 1364033 ID=Msa1268360-mRNA-1:cds;Parent=Msa1268360-mRNA-1
chr8_3 three_prime_UTR 1364249 1364439 1364249 ID=Msa1268360-mRNA-1:three_prime_utr;Parent=Msa1268360-mRNA-1
Gene Sequence

>Msa1268360

ATGGGCAATAAATATAGGTACATGTTTAATAGACTATTCAGGTTTACCAATTCATGGAAGAAAAGTAACTCACCAAGAGGTAGAAGAATTTTCCACAGAGATGTTGAAAAAGAAGAATTCCAATATGCTAGTAGTCACTGTCTTTCATCCTACTACAGTGTTTTTGTGGTTAGATTAGCAATCATGGTAATGTTAGCCATCTTGATAGGGCTATTGACCATATTAACATGGCATTTCACAAAGATTTATACGAAAAAATCATTGAGTAGTTTGGCGTATGGTCTGCGTTATGAACTTCTGCAACGTCCGATTTTGAGGATGTGGAATATTTTGAATTCTACTTCTGAAATTACAACAGCTCAGGTCAAGTTGTCTCAATATGTGATCAGACGTTATAGCAATCCTGCATCTCAAGCTGAGCAAGTTGAGCAGCTATATGAAGCAATGAGGGCAGTAACATGGTCACTATTTGCTAGTAGAAAAGCACTAAACTCAATAACAATCAATTACAAGAATGGATTTGTTCAAGCATTCCATAGAGATCTAAAAGATAACAACACATTTTACATCTACTCAGATCTTTCAAATTACTCCATGGTTGCATCAACCTCAAACATGGTCAAGTCCCTTTCAACTCATCAAGCTTGGGATGACAAAACAATTCATGGTAACTTTTCAGCAATTTGGTATAGAGAACCACTTGATCCTGTCACAGGCGAAAAAATCGGAAAAGCAATGAAAATTGCACCAGAAGATTTGATCAACATAGCAGGACTTTCACAAGTTCCGGATGGTGTAGCTACATGGCATGTAGCAGTTAGTAAATTTACAGATTCGCCTTTGCTTTCGGCAGCTTTACCTGTTTGGGATTCTTCTAATAAAAGTATTATGGCTGTTGTTGGTGTTACAACTGCATTTTATAGTGTTGGACAGTTAATGAGAGAGTTAGTTGAGATGCATAGTGGTCACATGTATTTGACTTCTCAACAAGGCTATTTACTTGCAACTTCTACTAGTGCACCGTTACTTACAAATTCGACTAAGCCACCACCAAAGCTTAAGATGGCTGTGGATTGTGAAGATGATATAATAAGACTTGGAGCTGAGTGGTTGCAGAGAACTTATGGGAATCATTTTCCTAATTCAACTCGTGAGGTTCATGTTGAGAATGCTAAGCTAGGGAATCAGCAATATTATATTGACTCGTTCTACCTAAACTTGAAGAGACTTCCTTTGGTAGGTGTAATCATCATACCAAGAAAGTATATCATGGGACAGGTGGATGAGAGATCTTTCAAAACATTGGTTATTCTGATATCTGCATCTTTATGCATTTTTGTCATTGGATGTGTTTGCATTTTGATATTGACAAATGGAGTGTCAAAGGAAATGAATCTGAGAGCAGAACTGATAAGTCAACTTGAAGCAAGAAGGAAGGCAGAGGCATCAAGCAACTATAAAAGTCAATTCCTTGCAAACATGAGTCATGAACTAAGGACACCTATGGCAGCAGTAATTGGATTGCTTGACATTCTTATATCTGATGATTGTCTCACAAATGAACAATATTCAACAGTTACTCAAATAAGAAAATGTTCAACAGCTCTTCTCCGTCTTCTTAACAACATATTGGATCTGAGCAAGGTGGAGTCTGGAAAACTTGTACTAGAAGATGCAGAATTCGACTTGGGACGCGAACTTGAAGGGCTTGTAGATATGTTTTCTGTTCAGTGCATTAATCACAATGTAGAGACTGTTTTAGACCTTTCTGATGATATGCCAAAATTAGTTAGAGGTGACTCTGGCAGGGTGGTTCAAGTATTTGCAAATTTGATCAACAATTCAATTAAGTTTACTACATCTGGTCATGTTATTCTGCGAGGATGGTGTGAATATCCAAACTCTTGCAACGATAGTCCGAATTTTTATCTTGATCAGAAGAAATCAAGAAATTTACATAAGAGCAAAGAGAAGCCAAATGCAAGTCATGCAAAGAGAATATCTATGAGAGATAACAAAGTGATACTTTGGTTTGAAGTTGAGGACACAGGCTGTGGTATCGATCCAAGCAAATGGGATTCTGTGTTTGAAAGCTTTGAGCAAGCTGATCCATCAACTACTAGACTGCATGGAGGGACTGGTCTAGGTCTTTGCATCGTTAGGAACTTGGTTAATAAGATGGGTGGAGAAATCAAGGTTACCAAAAAGGAGGGTCAAGGAACATTGATGAGATTATGTTTGCTTCTTAGTGTACCAATGGATGTCACAGAACAACATAGTGCTTTAAATTTGACAGACAATGGCTTAGTGGTATTGCTTGCACTACAAGGCAATATGGGTAGAATAATAACATCGAAGTGGTTAACCAAAAAAGGGGTGTGCACAATGGAAGCATCTGAATGGAATGGACTAACACAAATTTTGAGGGAACTCTTTCATGCAAGAAGTTCAGTCCATAACAATAACAACTTTGATGCACATTATCCAATAAATCTTGAAGGATTTAAGTCTAAACTACTAAGCATCAAAGATATGAGGAATCCAATTTTTGTCATTGTTGTTGACATTGGTTTGCTTGACTTAAGCACAGATATATGGAAAGAACAACTTAACTTCCTTCACAAGTATTTCGGAAGAGCAAAATTTGTGTGGATTCTGAATCATGACACATCAAATACCATAAAGACTGAGCTTCGTCGGAAAGGACACTTACTAATGGTTAACAAACCTCTATACAAAGCAAAAATGATTCATATTTTGGAAGCTGTTATAAAAGAGAGAAATCTTGAGTTGCAAAAGAAAAACATGAAAGAGGGTGATTTGCATGAGTTTCTTGAGATTGATTCTACTCAATTTGAAGCTGCTACTAGCTCTGATGATTCAGATATATCTGAAATTAGTGAAAAACCAATTTTAAAGTTAACCGATGAAAATGAACATTTGGAAGAAAATAATCCAAGGGAAGAAGAATCTTGTACCTCTGAAGACAACAAAGCTAAAGAAACAAACTTTGCAACACAAGCTTATGATAGGGTGACAAGGTCAAGAAAAGAAGTGAATGATAAGAAATCACTTGAAGGGTTAAGGATTTTGCTTGCAGAAGATACACCAGTAATTCAAAGGGTTGCAACAATAATGCTTGAAAAAATGGGAGCTGTTGTTGTTGCTGTAGGTGATGGACAACAAGCAGTGGATGCTCTTAATTATATGGTAAGTGCTGAAGATTGTAGAAGAGAGTCTCTCCAGAAGGACAAAAATACAAGATCACAAACAGAAATTTTGACTTGCCATCAATATGATTTGATCCTAATGGATTGTCAGATGCCAAAGATGGATGGATATGAGGCAACAAAAGCAATAAGGAAATCAGAGGAAGGAACAGGCAAACACATTCCAATTGTTGCTCTAACAGCCCATGCAATGTCTTGTGATGAAGCCAAATGCCTTAAGGTTGGCATGGATGCTTACTTAACAAAGCCAATTGACTTCAAGCTTATGGTCTCAACCATTCTCTCACTCACTAAACCAACAACCTAG
Protein sequence

>Msa1268360

MGNKYRYMFNRLFRFTNSWKKSNSPRGRRIFHRDVEKEEFQYASSHCLSSYYSVFVVRLAIMVMLAILIGLLTILTWHFTKIYTKKSLSSLAYGLRYELLQRPILRMWNILNSTSEITTAQVKLSQYVIRRYSNPASQAEQVEQLYEAMRAVTWSLFASRKALNSITINYKNGFVQAFHRDLKDNNTFYIYSDLSNYSMVASTSNMVKSLSTHQAWDDKTIHGNFSAIWYREPLDPVTGEKIGKAMKIAPEDLINIAGLSQVPDGVATWHVAVSKFTDSPLLSAALPVWDSSNKSIMAVVGVTTAFYSVGQLMRELVEMHSGHMYLTSQQGYLLATSTSAPLLTNSTKPPPKLKMAVDCEDDIIRLGAEWLQRTYGNHFPNSTREVHVENAKLGNQQYYIDSFYLNLKRLPLVGVIIIPRKYIMGQVDERSFKTLVILISASLCIFVIGCVCILILTNGVSKEMNLRAELISQLEARRKAEASSNYKSQFLANMSHELRTPMAAVIGLLDILISDDCLTNEQYSTVTQIRKCSTALLRLLNNILDLSKVESGKLVLEDAEFDLGRELEGLVDMFSVQCINHNVETVLDLSDDMPKLVRGDSGRVVQVFANLINNSIKFTTSGHVILRGWCEYPNSCNDSPNFYLDQKKSRNLHKSKEKPNASHAKRISMRDNKVILWFEVEDTGCGIDPSKWDSVFESFEQADPSTTRLHGGTGLGLCIVRNLVNKMGGEIKVTKKEGQGTLMRLCLLLSVPMDVTEQHSALNLTDNGLVVLLALQGNMGRIITSKWLTKKGVCTMEASEWNGLTQILRELFHARSSVHNNNNFDAHYPINLEGFKSKLLSIKDMRNPIFVIVVDIGLLDLSTDIWKEQLNFLHKYFGRAKFVWILNHDTSNTIKTELRRKGHLLMVNKPLYKAKMIHILEAVIKERNLELQKKNMKEGDLHEFLEIDSTQFEAATSSDDSDISEISEKPILKLTDENEHLEENNPREEESCTSEDNKAKETNFATQAYDRVTRSRKEVNDKKSLEGLRILLAEDTPVIQRVATIMLEKMGAVVVAVGDGQQAVDALNYMVSAEDCRRESLQKDKNTRSQTEILTCHQYDLILMDCQMPKMDGYEATKAIRKSEEGTGKHIPIVALTAHAMSCDEAKCLKVGMDAYLTKPIDFKLMVSTILSLTKPTT*