AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0800120

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0800120 MtrunA17_Chr5g0405701 97.451 1177 28 2 1 1177 25 1199 0.0 2394
Msa0800120 MtrunA17_Chr8g0371601 73.610 1205 256 14 1 1178 1 1170 0.0 1748
Msa0800120 MtrunA17_Chr1g0197591 31.429 385 236 7 385 751 280 654 1.71e-40 162
Msa0800120 MtrunA17_Chr1g0197591 38.129 139 63 5 1023 1161 921 1036 5.44e-16 83.6
Msa0800120 MtrunA17_Chr8g0377481 34.062 320 187 6 439 741 345 657 3.77e-38 155
Msa0800120 MtrunA17_Chr8g0377481 34.722 144 62 2 1025 1162 838 955 6.03e-18 90.1
Msa0800120 MtrunA17_Chr1g0194741 33.429 347 209 8 398 725 307 650 5.78e-38 152
Msa0800120 MtrunA17_Chr3g0122391 32.704 318 192 6 442 741 396 709 9.18e-38 154
Msa0800120 MtrunA17_Chr3g0122391 34.932 146 64 2 1022 1162 893 1012 9.58e-17 86.3
Msa0800120 MtrunA17_Chr8g0392301 33.036 336 191 7 439 741 336 670 7.62e-36 147
Msa0800120 MtrunA17_Chr8g0392301 31.953 169 74 4 1025 1178 858 1000 1.95e-15 81.6
Msa0800120 MtrunA17_Chr5g0447641 30.982 326 191 6 441 741 572 888 5.32e-32 135
Msa0800120 MtrunA17_Chr5g0447641 30.814 172 69 4 1015 1162 1055 1200 1.57e-13 75.9
Msa0800120 MtrunA17_Chr7g0269631 33.721 258 145 4 476 731 334 567 8.65e-32 133
Msa0800120 MtrunA17_Chr4g0013831 32.210 267 154 5 476 740 334 575 2.92e-29 125
Msa0800120 MtrunA17_Chr3g0136601 30.537 298 158 6 489 753 373 654 8.04e-26 115
Msa0800120 MtrunA17_Chr1g0150511 28.939 311 171 6 489 751 379 687 3.16e-24 110
Msa0800120 MtrunA17_Chr1g0194731 31.250 160 86 4 1012 1170 312 448 1.92e-15 80.5
Msa0800120 MtrunA17_Chr7g0274831 25.228 329 216 5 475 798 364 667 1.57e-14 78.6
Msa0800120 MtrunA17_Chr8g0343551 52.381 63 26 2 1099 1161 15 73 3.19e-13 66.6
Msa0800120 MtrunA17_Chr1g0186431 31.655 139 94 1 476 614 355 492 2.50e-12 71.6
Msa0800120 MtrunA17_Chr1g0190021 23.810 378 233 11 475 836 360 698 2.75e-11 68.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0800120 AT2G17820.1 65.414 1197 368 14 4 1177 26 1199 0.0 1575
Msa0800120 AT2G47430.1 28.793 837 466 25 410 1162 318 1108 7.82e-73 265
Msa0800120 AT1G27320.1 34.036 332 209 4 436 758 400 730 1.24e-41 167
Msa0800120 AT1G27320.1 32.051 156 62 2 1025 1162 887 1016 8.06e-15 80.1
Msa0800120 AT2G01830.2 32.727 330 195 6 445 749 431 758 1.96e-41 166
Msa0800120 AT2G01830.2 33.540 161 75 2 1022 1176 939 1073 6.94e-17 87.0
Msa0800120 AT2G01830.1 33.230 322 188 6 445 741 408 727 2.02e-41 166
Msa0800120 AT2G01830.1 33.540 161 75 2 1022 1176 916 1050 8.13e-17 86.7
Msa0800120 AT2G01830.4 33.230 322 188 6 445 741 408 727 2.02e-41 166
Msa0800120 AT2G01830.4 33.540 161 75 2 1022 1176 916 1050 8.13e-17 86.7
Msa0800120 AT2G01830.6 33.230 322 188 6 445 741 408 727 2.02e-41 166
Msa0800120 AT2G01830.6 33.540 161 75 2 1022 1176 916 1050 8.13e-17 86.7
Msa0800120 AT2G01830.3 33.230 322 188 6 445 741 408 727 2.02e-41 166
Msa0800120 AT2G01830.3 33.540 161 75 2 1022 1176 916 1050 8.13e-17 86.7
Msa0800120 AT2G01830.5 33.230 322 188 6 445 741 420 739 2.06e-41 166
Msa0800120 AT2G01830.5 33.540 161 75 2 1022 1176 928 1062 8.39e-17 86.7
Msa0800120 AT5G35750.1 26.642 533 312 13 439 936 540 1028 2.05e-38 157
Msa0800120 AT5G35750.1 28.313 166 75 2 1029 1176 1036 1175 1.04e-14 80.1
Msa0800120 AT1G66340.1 32.453 265 152 5 476 740 333 570 1.94e-32 136
Msa0800120 AT5G10720.1 30.422 332 198 6 489 804 369 683 2.09e-29 127
Msa0800120 AT2G40940.1 31.884 276 158 5 460 729 313 564 1.33e-28 123
Msa0800120 AT3G04580.2 33.553 152 72 4 1020 1170 634 757 2.80e-13 75.1
Msa0800120 AT3G04580.2 26.100 341 211 12 474 798 355 670 8.34e-13 73.6
Msa0800120 AT3G04580.1 33.553 152 72 4 1020 1170 634 757 2.80e-13 75.1
Msa0800120 AT3G04580.1 26.100 341 211 12 474 798 355 670 8.34e-13 73.6

Find 194 sgRNAs with CRISPR-Local

Find 366 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCGACGAAGCTCAGTCTTTA+TGG 0.101440 5_3:-13534524 None:intergenic
TTAAATCCTTCAAGATTTAT+TGG 0.172560 5_3:-13534331 None:intergenic
TTACAACTATGTACATTTCT+AGG 0.187196 5_3:-13535793 None:intergenic
TCATCGGTTAACTTTAAAAT+TGG 0.200671 5_3:-13534754 None:intergenic
CCGTCTTCTTAACAACATAT+TGG 0.249014 5_3:+13532113 Msa0800120:CDS
GAGTCACCTCTAACTAATTT+TGG 0.254567 5_3:-13532676 None:intergenic
TTCTTCTAATAAAAGTATTA+TGG 0.254759 5_3:+13530549 Msa0800120:CDS
GTTGCAACCCTTTGAATTAC+TGG 0.261968 5_3:-13534955 None:intergenic
GCCAATTGACTTCAAGCTTA+TGG 0.265808 5_3:+13535737 Msa0800120:CDS
GCTTGCACTACAAGGCAATA+TGG 0.271450 5_3:+13534162 Msa0800120:CDS
GAGTGGTTGCAGAGAACTTA+TGG 0.273458 5_3:+13530784 Msa0800120:CDS
TATATACATTTATTTCTATT+AGG 0.278525 5_3:-13535948 None:intergenic
TTCGGCAGCTTTACCTGTTT+GGG 0.279753 5_3:+13530525 Msa0800120:CDS
TTTCGGCAGCTTTACCTGTT+TGG 0.281134 5_3:+13530524 Msa0800120:CDS
ACACCTATGGCAGCAGTAAT+TGG 0.293817 5_3:+13532000 Msa0800120:CDS
CTCTTTGCATGACTTGCATT+TGG 0.297699 5_3:-13533030 None:intergenic
TCAATATGATTTGATCCTAA+TGG 0.301867 5_3:+13535137 Msa0800120:CDS
AAGGAAGTCTCTTCAAGTTT+AGG 0.303079 5_3:-13530891 None:intergenic
GCCTCATATCCATCCATCTT+TGG 0.303088 5_3:-13535585 None:intergenic
CATCAAAGTTGTTATTGTTA+TGG 0.319766 5_3:-13534300 None:intergenic
TGAACCTCACGAGTTGAATT+AGG 0.322157 5_3:-13530817 None:intergenic
CATGCCAACCTTAAGGCATT+TGG 0.328149 5_3:-13535697 None:intergenic
TGTCCCATGATATACTTTCT+TGG 0.328708 5_3:-13531492 None:intergenic
GGACTATCGTTGCAAGAGTT+TGG 0.330068 5_3:-13532952 None:intergenic
AGTGGATGCTCTTAATTATA+TGG 0.332374 5_3:+13535035 Msa0800120:CDS
TTGCAACACAAGCTTATGAT+AGG 0.334949 5_3:+13534857 Msa0800120:CDS
TTGACTTAAGCACAGATATA+TGG 0.337006 5_3:+13534422 Msa0800120:CDS
AACTTCCTTCACAAGTATTT+CGG 0.341250 5_3:+13534457 Msa0800120:CDS
GTAATGTTAGCCATCTTGAT+AGG 0.342025 5_3:+13529235 Msa0800120:CDS
ACATGTTTAATAGACTATTC+AGG 0.345267 5_3:+13528930 Msa0800120:CDS
GCTTACAGTCTAGTAGTTGA+TGG 0.352312 5_3:-13533268 None:intergenic
AGAAATCAAGGTTACCAAAA+AGG 0.359146 5_3:+13533899 Msa0800120:CDS
AGCAGGACTTTCACAAGTTC+CGG 0.361656 5_3:+13530447 Msa0800120:CDS
TATGTACATTTCTAGGTTGT+TGG 0.363384 5_3:-13535786 None:intergenic
TACAGATTCGCCTTTGCTTT+CGG 0.364558 5_3:+13530507 Msa0800120:CDS
TGTGAAATGCCATGTTAATA+TGG 0.365711 5_3:-13529266 None:intergenic
AGAAATCACTTGAAGGGTTA+AGG 0.373683 5_3:+13534911 Msa0800120:CDS
CTTTATGTTCATCAAGTTCA+AGG 0.387857 5_3:+13528882 Msa0800120:five_prime_UTR
AACCGATGAAAATGAACATT+TGG 0.389298 5_3:+13534768 Msa0800120:CDS
TATTCAGGTTTACCAATTCA+TGG 0.394690 5_3:+13528945 Msa0800120:CDS
GACAGTGACTACTAGCATAT+TGG 0.397259 5_3:-13529030 None:intergenic
AGGCATGGAGGGACTGGTCT+AGG 0.397957 5_3:+13533566 Msa0800120:intron
ACCATAAGCTTGAAGTCAAT+TGG 0.402673 5_3:-13535738 None:intergenic
CCCTTTCAACTCATCAAGCT+TGG 0.402852 5_3:+13530305 Msa0800120:CDS
GCTATGTTGATCAAATCTTC+TGG 0.404417 5_3:-13530427 None:intergenic
ACTTGCTCAGCTTGAGATGC+AGG 0.406924 5_3:-13529451 None:intergenic
GTACAAGATTCTTCTTCCCT+TGG 0.408031 5_3:-13534802 None:intergenic
TGGAAAATTCTTCTACCTCT+TGG 0.415464 5_3:-13528983 None:intergenic
ATGAGGCAACAAAAGCAATA+AGG 0.417051 5_3:+13535601 Msa0800120:CDS
TCCACAGCCATCTTAAGCTT+TGG 0.417058 5_3:-13530730 None:intergenic
AACACAGAATCCCATTTGCT+TGG 0.417471 5_3:-13533223 None:intergenic
TAGTTAGAGGTGACTCTGGC+AGG 0.423741 5_3:+13532683 Msa0800120:CDS
GAGATAACAAAGTGATACTT+TGG 0.425255 5_3:+13533064 Msa0800120:CDS
TGGGATGACAAAACAATTCA+TGG 0.425736 5_3:+13530325 Msa0800120:CDS
TTTGACAGACAATGGCTTAG+TGG 0.429155 5_3:+13534001 Msa0800120:CDS
CTCCAATGGGCAATAAATAT+AGG 0.429398 5_3:+13528906 Msa0800120:exon
TGTGGTTAGATTAGCAATCA+TGG 0.432976 5_3:+13529075 Msa0800120:CDS
TACACTATATAGGTGGAGTC+TGG 0.435729 5_3:+13532255 Msa0800120:intron
TTTGATCCTAATGGATTGTC+AGG 0.439291 5_3:+13535146 Msa0800120:CDS
AAACTTGAAGAGACTTCCTT+TGG 0.443045 5_3:+13530894 Msa0800120:CDS
TCTTTGCATCGTTAGGAACT+TGG 0.444026 5_3:+13533589 Msa0800120:CDS
TAGGTATCGATCCAAGCAAA+TGG 0.444365 5_3:+13533212 Msa0800120:intron
CCTTTCAACTCATCAAGCTT+GGG 0.447280 5_3:+13530306 Msa0800120:CDS
TTAGGATCAAATCATATTGA+TGG 0.448278 5_3:-13535134 None:intergenic
GATATGCCAAAATTAGTTAG+AGG 0.449305 5_3:+13532670 Msa0800120:CDS
TATTTCAGGCATGGAGGGAC+TGG 0.458163 5_3:+13533560 Msa0800120:intron
TCGGAAAGGACACTTACTAA+TGG 0.460922 5_3:+13534543 Msa0800120:CDS
AAGCATCCATGCCAACCTTA+AGG 0.465093 5_3:-13535704 None:intergenic
TACCTATATTTATTGCCCAT+TGG 0.466197 5_3:-13528908 None:intergenic
ATATTCCACATCCTCAAAAT+CGG 0.469359 5_3:-13529355 None:intergenic
TGGTTTAGTGAGTGAGAGAA+TGG 0.469497 5_3:-13535766 None:intergenic
AGAAATAAATGTATATAGAA+AGG 0.471186 5_3:+13535954 Msa0800120:three_prime_UTR
CTTGCACTACAAGGCAATAT+GGG 0.472560 5_3:+13534163 Msa0800120:CDS
CATTATCCAATAAATCTTGA+AGG 0.473443 5_3:+13534325 Msa0800120:CDS
ATATGATTGCACTTTGTTGA+AGG 0.476921 5_3:+13535895 Msa0800120:three_prime_UTR
TTTAGCTTTGTTGTCTTCAG+AGG 0.483395 5_3:-13534824 None:intergenic
AGGAAATCAGAGGAAGGAAC+AGG 0.483804 5_3:+13535621 Msa0800120:CDS
TGAGAGATCTTTCAAAACAT+TGG 0.483958 5_3:+13531521 Msa0800120:CDS
CATACCAAGAAAGTATATCA+TGG 0.484306 5_3:+13531488 Msa0800120:CDS
CTTCATCACAAGACATTGCA+TGG 0.484352 5_3:-13535674 None:intergenic
ATAACAATCAATTACAAGAA+TGG 0.485356 5_3:+13530175 Msa0800120:CDS
TGTATGACAGTCATGAACTA+AGG 0.486515 5_3:+13531977 Msa0800120:intron
CAGGTATTGCTTGCACTACA+AGG 0.486574 5_3:+13534154 Msa0800120:intron
AATGATAAGAAATCACTTGA+AGG 0.487266 5_3:+13534904 Msa0800120:CDS
TGATGAAGCCAAATGCCTTA+AGG 0.487966 5_3:+13535689 Msa0800120:CDS
TTTGTCATTGTTGTTGACAT+TGG 0.490082 5_3:+13534394 Msa0800120:CDS
GCCAAAGATGGATGGATATG+AGG 0.491952 5_3:+13535584 Msa0800120:CDS
AGTTCACTAGTATCAGTAAA+CGG 0.492218 5_3:+13535845 Msa0800120:three_prime_UTR
AAAAGTATTATGGCTGTTGT+TGG 0.492363 5_3:+13530559 Msa0800120:CDS
CTCTTCCGAAATACTTGTGA+AGG 0.492381 5_3:-13534462 None:intergenic
TGGGCTGTTAGAGCAACAAT+TGG 0.493691 5_3:-13535654 None:intergenic
GTTGTTGTTGCTGTAGGTGA+TGG 0.497897 5_3:+13535003 Msa0800120:CDS
CCAAGCTTGATGAGTTGAAA+GGG 0.499413 5_3:-13530305 None:intergenic
ACAGCCATCTTAAGCTTTGG+TGG 0.499420 5_3:-13530727 None:intergenic
TTCATACCTGACAATCCATT+AGG 0.501681 5_3:-13535152 None:intergenic
TAAGATGGGTGGAGAAATCA+AGG 0.502216 5_3:+13533887 Msa0800120:CDS
GCCATCTTAAGCTTTGGTGG+TGG 0.502735 5_3:-13530724 None:intergenic
GATACTTTGGTTTGAAGTTG+AGG 0.505428 5_3:+13533077 Msa0800120:CDS
ACTTGGGACGCGAACTTGAA+GGG 0.507406 5_3:+13532307 Msa0800120:CDS
GTCTAGGTCTTTGCATCGTT+AGG 0.507867 5_3:+13533582 Msa0800120:CDS
TGCCATGTAGCTACACCATC+CGG 0.509110 5_3:-13530466 None:intergenic
TACTAAGCATCAAAGATATG+AGG 0.509714 5_3:+13534362 Msa0800120:CDS
AGTGGTTGCAGAGAACTTAT+GGG 0.510065 5_3:+13530785 Msa0800120:CDS
ATAGATATAGCAATGAGTTA+TGG 0.510083 5_3:+13528819 None:intergenic
TTATTAGAAGAATCCCAAAC+AGG 0.512019 5_3:-13530538 None:intergenic
CATGTTGAGAATGCTAAGCT+AGG 0.514123 5_3:+13530838 Msa0800120:CDS
TGATACTAGTGAACTCAGTA+AGG 0.519583 5_3:-13535837 None:intergenic
AAGATACACCAGTAATTCAA+AGG 0.521392 5_3:+13534947 Msa0800120:CDS
ATCAAGTTCAAGGTCTCCAA+TGG 0.522476 5_3:+13528892 Msa0800120:exon
TTCTGAAATTACAACAGCTC+AGG 0.525125 5_3:+13529390 Msa0800120:CDS
TTCCGGATGGTGTAGCTACA+TGG 0.528222 5_3:+13530464 Msa0800120:CDS
GAAGTTGAGGACACAGGCTG+TGG 0.528521 5_3:+13533090 Msa0800120:CDS
TTACTTATTTCAGGCATGGA+GGG 0.534505 5_3:+13533555 Msa0800120:intron
GTCAATTCCTTGCAAACATG+AGG 0.534970 5_3:+13531700 Msa0800120:CDS
GCTTTAAATTTGACAGACAA+TGG 0.536936 5_3:+13533993 Msa0800120:CDS
TGGATGGCAGGTTAATAAGA+TGG 0.537101 5_3:+13533872 Msa0800120:intron
AGATCTTTCAAATTACTCCA+TGG 0.538971 5_3:+13530255 Msa0800120:CDS
GGAGCTGTTGTTGTTGCTGT+AGG 0.539267 5_3:+13534997 Msa0800120:CDS
GGATGGCAGGTTAATAAGAT+GGG 0.539780 5_3:+13533873 Msa0800120:intron
GACTTGGGACGCGAACTTGA+AGG 0.541648 5_3:+13532306 Msa0800120:CDS
TTTGCTTCTTAGTGTACCAA+TGG 0.542330 5_3:+13533950 Msa0800120:CDS
ATTGACAAATGGAGTGTCAA+AGG 0.544031 5_3:+13531602 Msa0800120:CDS
AGGTATCGATCCAAGCAAAT+GGG 0.547486 5_3:+13533213 Msa0800120:intron
CCCAAGCTTGATGAGTTGAA+AGG 0.549150 5_3:-13530306 None:intergenic
AAGGGACTTGACCATGTTTG+AGG 0.549611 5_3:-13530287 None:intergenic
CCATAAAGACTGAGCTTCGT+CGG 0.550895 5_3:+13534524 Msa0800120:CDS
AATTAGATGCCAAAGATGGA+TGG 0.551523 5_3:+13535576 Msa0800120:intron
GCCACCACCAAAGCTTAAGA+TGG 0.552183 5_3:+13530723 Msa0800120:CDS
AAATAAACCTCATGTTTGCA+AGG 0.556476 5_3:-13531707 None:intergenic
GGAAAATTAGATGCCAAAGA+TGG 0.561731 5_3:+13535572 Msa0800120:intron
AATCCAATTACTGCTGCCAT+AGG 0.562131 5_3:-13532003 None:intergenic
TAATGTTAGCCATCTTGATA+GGG 0.562447 5_3:+13529236 Msa0800120:CDS
TCATGAACTAAGGACACCTA+TGG 0.568676 5_3:+13531987 Msa0800120:CDS
TCATTGAGTAGTTTGGCGTA+TGG 0.569196 5_3:+13529307 Msa0800120:CDS
GCACAATGGAAGCATCTGAA+TGG 0.570506 5_3:+13534227 Msa0800120:CDS
ATGGAAGCATCTGAATGGAA+TGG 0.570666 5_3:+13534232 Msa0800120:CDS
AAGAAAGTATATCATGGGAC+AGG 0.570703 5_3:+13531494 Msa0800120:CDS
TGTTGTTCTGTGACATCCAT+TGG 0.570801 5_3:-13533966 None:intergenic
TGCAACACAAGCTTATGATA+GGG 0.572109 5_3:+13534858 Msa0800120:CDS
TAAGTCAACTTGAAGCAAGA+AGG 0.572906 5_3:+13531649 Msa0800120:CDS
CCAATATGTTGTTAAGAAGA+CGG 0.575002 5_3:-13532113 None:intergenic
AGATACACCAGTAATTCAAA+GGG 0.575176 5_3:+13534948 Msa0800120:CDS
AAGACTGAGCTTCGTCGGAA+AGG 0.575868 5_3:+13534529 Msa0800120:CDS
GAAGATTTGATCAACATAGC+AGG 0.577289 5_3:+13530430 Msa0800120:CDS
AAATTAGTTAGAGGTGACTC+TGG 0.577940 5_3:+13532679 Msa0800120:CDS
ATCTCAAGCTGAGCAAGTTG+AGG 0.579080 5_3:+13529456 Msa0800120:CDS
GTCATGTTATTCTGCGAGGA+TGG 0.580292 5_3:+13532920 Msa0800120:CDS
TCAAGTTCAAGGTCTCCAAT+GGG 0.580482 5_3:+13528893 Msa0800120:exon
AAAGTATATCATGGGACAGG+TGG 0.583109 5_3:+13531497 Msa0800120:CDS
ACCAAAGCTTAAGATGGCTG+TGG 0.586674 5_3:+13530729 Msa0800120:CDS
ATACCAAGAAAGTATATCAT+GGG 0.587306 5_3:+13531489 Msa0800120:CDS
ATGTTGAGAATGCTAAGCTA+GGG 0.588292 5_3:+13530839 Msa0800120:CDS
TCGGAAGAGCAAAATTTGTG+TGG 0.588656 5_3:+13534476 Msa0800120:CDS
GGTCAATAGCCCTATCAAGA+TGG 0.588935 5_3:-13529245 None:intergenic
GAAGCCAAATGCCTTAAGGT+TGG 0.589210 5_3:+13535693 Msa0800120:CDS
TCAACTTGAAGCAAGAAGGA+AGG 0.590551 5_3:+13531653 Msa0800120:CDS
TGAAGCAAGAAGGAAGGCAG+AGG 0.592213 5_3:+13531659 Msa0800120:CDS
AGAAGATGCAGAATTCGACT+TGG 0.592480 5_3:+13532290 Msa0800120:CDS
ATGATAAGAAATCACTTGAA+GGG 0.595276 5_3:+13534905 Msa0800120:CDS
GGTTGCATCAACCTCAAACA+TGG 0.597197 5_3:+13530276 Msa0800120:CDS
TGGCAGGTTAATAAGATGGG+TGG 0.597564 5_3:+13533876 Msa0800120:intron
GAAGATGATATAATAAGACT+TGG 0.598140 5_3:+13530757 Msa0800120:CDS
AATTGAGAATCATACCAGAA+AGG 0.600279 5_3:-13532386 None:intergenic
ATTTGGAAGAAAATAATCCA+AGG 0.600592 5_3:+13534785 Msa0800120:CDS
AAGCAATGAGGGCAGTAACA+TGG 0.603356 5_3:+13530119 Msa0800120:CDS
GAACCACTTGATCCTGTCAC+AGG 0.609145 5_3:+13530373 Msa0800120:CDS
TGGTTTGAAGTTGAGGACAC+AGG 0.609745 5_3:+13533084 Msa0800120:CDS
GCAGCTATATGAAGCAATGA+GGG 0.611384 5_3:+13530108 Msa0800120:intron
TAGAAGAGAGTCTCTCCAGA+AGG 0.615474 5_3:+13535074 Msa0800120:CDS
TTAGTCGAATTTGTAAGTAA+CGG 0.616052 5_3:-13530700 None:intergenic
CAAATGCCTTAAGGTTGGCA+TGG 0.617547 5_3:+13535698 Msa0800120:CDS
TCGCCTGTGACAGGATCAAG+TGG 0.620643 5_3:-13530376 None:intergenic
GGTAAAGCTGCCGAAAGCAA+AGG 0.621545 5_3:-13530517 None:intergenic
AAAAGCAATAAGGAAATCAG+AGG 0.621819 5_3:+13535611 Msa0800120:CDS
TTCATCACAAGACATTGCAT+GGG 0.622262 5_3:-13535673 None:intergenic
GCAATAAGGAAATCAGAGGA+AGG 0.623445 5_3:+13535615 Msa0800120:CDS
TTTGGAAGAAAATAATCCAA+GGG 0.626055 5_3:+13534786 Msa0800120:CDS
GGCTATTGACCATATTAACA+TGG 0.629966 5_3:+13529257 Msa0800120:CDS
AGCAGCTATATGAAGCAATG+AGG 0.636477 5_3:+13530107 Msa0800120:intron
CAACATATTGGATCTGAGCA+AGG 0.636910 5_3:+13532125 Msa0800120:CDS
TTTACTTATTTCAGGCATGG+AGG 0.638874 5_3:+13533554 Msa0800120:intron
GAGTTAGTTGAGATGCATAG+TGG 0.639051 5_3:+13530622 Msa0800120:CDS
AGTTAGAGGTGACTCTGGCA+GGG 0.641913 5_3:+13532684 Msa0800120:CDS
GAAGATGCAGAATTCGACTT+GGG 0.643061 5_3:+13532291 Msa0800120:CDS
TAGAGGTGACTCTGGCAGGG+TGG 0.646259 5_3:+13532687 Msa0800120:CDS
GGACTTTCACAAGTTCCGGA+TGG 0.648808 5_3:+13530451 Msa0800120:CDS
GTTTGAGGTTGATGCAACCA+TGG 0.651337 5_3:-13530272 None:intergenic
GTAGAATAATAACATCGAAG+TGG 0.676676 5_3:+13534185 Msa0800120:CDS
TAATAAGACTTGGAGCTGAG+TGG 0.679941 5_3:+13530767 Msa0800120:CDS
GCTGGTCATGTTATTCTGCG+AGG 0.686581 5_3:+13532916 Msa0800120:intron
AAGAAAAGTAACTCACCAAG+AGG 0.687749 5_3:+13528968 Msa0800120:CDS
AGGTGATGGACAACAAGCAG+TGG 0.694466 5_3:+13535017 Msa0800120:CDS
AAGCTTATGATAGGGTGACA+AGG 0.699339 5_3:+13534866 Msa0800120:CDS
ATGTATTTGACTTCTCAACA+AGG 0.699506 5_3:+13530649 Msa0800120:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TGAATTTAATAAAATTTTAG+AGG - chr5_3:13529133-13529152 None:intergenic 10.0%
!! ATCTTAATAAAAGATAAATA+TGG + chr5_3:13529172-13529191 Msa0800120:intron 10.0%
!!! ATTTTAAATATCTATGATAT+TGG + chr5_3:13529590-13529609 Msa0800120:intron 10.0%
!!! TTTTATTTTTTTGATAAGAT+TGG + chr5_3:13529661-13529680 Msa0800120:intron 10.0%
!! TTTAATATTGTAAAAAATTG+CGG - chr5_3:13531120-13531139 None:intergenic 10.0%
!!! TTATTTTTAAAAATTGTTAC+TGG + chr5_3:13531833-13531852 Msa0800120:intron 10.0%
!!! TATATACATTTATTTCTATT+AGG - chr5_3:13535951-13535970 None:intergenic 10.0%
!! ATAAAAGATAAATATGGATT+TGG + chr5_3:13529178-13529197 Msa0800120:intron 15.0%
!!! AATAATATTTTGTTTTATGC+AGG + chr5_3:13529213-13529232 Msa0800120:intron 15.0%
!!! TTCTTCTAATAAAAGTATTA+TGG + chr5_3:13530549-13530568 Msa0800120:CDS 15.0%
!! CTATTAATAATTATTACCAA+AGG - chr5_3:13530913-13530932 None:intergenic 15.0%
!! TAAAACAGAAATTAAATAGA+GGG - chr5_3:13531415-13531434 None:intergenic 15.0%
!! TTAAAACAGAAATTAAATAG+AGG - chr5_3:13531416-13531435 None:intergenic 15.0%
!!! TTCATGAAATGTAAATTTTA+AGG - chr5_3:13533122-13533141 None:intergenic 15.0%
!!! ACTTATTTTATTTTGACAAA+AGG - chr5_3:13533151-13533170 None:intergenic 15.0%
!! AACAATAATAATGAGATAAA+AGG - chr5_3:13533853-13533872 None:intergenic 15.0%
!!! TTTTATCTCATTATTATTGT+TGG + chr5_3:13533852-13533871 Msa0800120:intron 15.0%
!! AGAAATAAATGTATATAGAA+AGG + chr5_3:13535954-13535973 Msa0800120:three_prime_UTR 15.0%
!! AATGATAATTAAGTCAGTTA+TGG + chr5_3:13529547-13529566 Msa0800120:intron 20.0%
!! ATAACAATCAATTACAAGAA+TGG + chr5_3:13530175-13530194 Msa0800120:CDS 20.0%
!!! CGTGCTTTTAAAATATTTTT+AGG + chr5_3:13530936-13530955 Msa0800120:intron 20.0%
!!! AGACATTTTGTAAAAAATTG+CGG - chr5_3:13531064-13531083 None:intergenic 20.0%
!!! TTCACTTTAAAATTGAGAAA+AGG + chr5_3:13531143-13531162 Msa0800120:intron 20.0%
!!! GTATACTAGTTTTACAAAAT+TGG + chr5_3:13531233-13531252 Msa0800120:intron 20.0%
!!! TTTTACAAAATTGGATTATC+TGG + chr5_3:13531242-13531261 Msa0800120:intron 20.0%
!! ATGAACAAACAATTCATTAT+AGG - chr5_3:13531924-13531943 None:intergenic 20.0%
!!! TTTTTTATTATGTGTGCAAT+TGG - chr5_3:13532203-13532222 None:intergenic 20.0%
!! TCATTTGTTCAAATTATAAC+CGG - chr5_3:13532476-13532495 None:intergenic 20.0%
!!! TAGACTTTAATTTCAATGAA+AGG + chr5_3:13532578-13532597 Msa0800120:intron 20.0%
!! TTCTGATCAAGATAAAAATT+CGG - chr5_3:13532976-13532995 None:intergenic 20.0%
!!! AGATCATACAATTGAAATTT+TGG + chr5_3:13533384-13533403 Msa0800120:intron 20.0%
!! AAAAAAATTCACATTTCCTT+TGG + chr5_3:13533715-13533734 Msa0800120:intron 20.0%
!! GAAATTTAAGGATAACAAAT+AGG + chr5_3:13534108-13534127 Msa0800120:intron 20.0%
!! TTAAATCCTTCAAGATTTAT+TGG - chr5_3:13534334-13534353 None:intergenic 20.0%
!!! AGCAAAAATGATTCATATTT+TGG + chr5_3:13534585-13534604 Msa0800120:CDS 20.0%
!! AACAATAATGCTTGAAAAAA+TGG + chr5_3:13534975-13534994 Msa0800120:CDS 20.0%
!! ACAATAATGCTTGAAAAAAT+GGG + chr5_3:13534976-13534995 Msa0800120:CDS 20.0%
!! TTTGGATAAATAGTTTAATC+AGG + chr5_3:13535267-13535286 Msa0800120:intron 20.0%
!! ATATAAAATTACACTTGTGT+TGG + chr5_3:13535315-13535334 Msa0800120:intron 20.0%
!!! AAGTCAAATTATTTTCATAC+AGG + chr5_3:13535452-13535471 Msa0800120:intron 20.0%
!! GATATAAAAAAGTTACCTAT+TGG - chr5_3:13535503-13535522 None:intergenic 20.0%
!! ATATCTAATAAGTGAATATC+AGG + chr5_3:13535518-13535537 Msa0800120:intron 20.0%
! ACATGTTTAATAGACTATTC+AGG + chr5_3:13528930-13528949 Msa0800120:CDS 25.0%
! GAAAAAATCATTGAGTAGTT+TGG + chr5_3:13529300-13529319 Msa0800120:CDS 25.0%
! CAAAAGGACTAATGTAATTA+AGG - chr5_3:13529620-13529639 None:intergenic 25.0%
!!! TTACATTAGTCCTTTTGATT+TGG + chr5_3:13529623-13529642 Msa0800120:intron 25.0%
! ACTAAATTGACCAAATCAAA+AGG - chr5_3:13529636-13529655 None:intergenic 25.0%
! ATAATATAGCACTATCTTAG+TGG + chr5_3:13529823-13529842 Msa0800120:intron 25.0%
!!! TGAAATTTTTCAATCATGCT+AGG + chr5_3:13529968-13529987 Msa0800120:intron 25.0%
!! ATCCTAACCAATTTTTGTTA+TGG + chr5_3:13530065-13530084 Msa0800120:intron 25.0%
! ATCCATAACAAAAATTGGTT+AGG - chr5_3:13530070-13530089 None:intergenic 25.0%
!! TGTTATCTTTTAGATCTCTA+TGG - chr5_3:13530216-13530235 None:intergenic 25.0%
! TTAGTCGAATTTGTAAGTAA+CGG - chr5_3:13530703-13530722 None:intergenic 25.0%
! GAAGATGATATAATAAGACT+TGG + chr5_3:13530757-13530776 Msa0800120:CDS 25.0%
!!! TTTTTTACAAAATGTCTCCA+TGG + chr5_3:13531067-13531086 Msa0800120:intron 25.0%
!! ATACCAAGAAAGTATATCAT+GGG + chr5_3:13531489-13531508 Msa0800120:CDS 25.0%
!! TCTTTATGCATTTTTGTCAT+TGG + chr5_3:13531561-13531580 Msa0800120:CDS 25.0%
!!! TGCATTTTGATATTGACAAA+TGG + chr5_3:13531591-13531610 Msa0800120:CDS 25.0%
!! AGTATTTAATTTAGAGAGCA+AGG + chr5_3:13531778-13531797 Msa0800120:intron 25.0%
! TTGAATGTAAACAAATGTGT+CGG - chr5_3:13531807-13531826 None:intergenic 25.0%
!! TTGTTCATAAATTAGCTTCA+TGG + chr5_3:13531936-13531955 Msa0800120:intron 25.0%
!!! CTTCATGGTTTTTTTTTTCT+TGG + chr5_3:13531951-13531970 Msa0800120:intron 25.0%
! CCTATATAGTGTAAAACATT+AGG - chr5_3:13532248-13532267 None:intergenic 25.0%
!! CCTAATGTTTTACACTATAT+AGG + chr5_3:13532245-13532264 Msa0800120:intron 25.0%
!! AATGTTTTACACTATATAGG+TGG + chr5_3:13532248-13532267 Msa0800120:intron 25.0%
! TTAAATGTAATCGTATGTGT+TGG + chr5_3:13532501-13532520 Msa0800120:intron 25.0%
! TCTGCATGAAAAATAGTTAT+TGG - chr5_3:13532649-13532668 None:intergenic 25.0%
! TATGTTCTAGTATAGTTACT+TGG + chr5_3:13532773-13532792 Msa0800120:intron 25.0%
! AAACAAATGTGATTTATTCG+TGG - chr5_3:13533174-13533193 None:intergenic 25.0%
! TTTGTTTATTTCCTATGTTG+TGG + chr5_3:13533187-13533206 Msa0800120:intron 25.0%
! ATGTATATAGTCAATGATCT+CGG + chr5_3:13533351-13533370 Msa0800120:intron 25.0%
! GTAAGAAAAAACAAACATTG+AGG - chr5_3:13533503-13533522 None:intergenic 25.0%
! ATCTCATTATTATTGTTGGA+TGG + chr5_3:13533856-13533875 Msa0800120:intron 25.0%
! CTAAAAGCAAGAGAAATTTA+AGG + chr5_3:13534096-13534115 Msa0800120:intron 25.0%
!! CATCAAAGTTGTTATTGTTA+TGG - chr5_3:13534303-13534322 None:intergenic 25.0%
! CATTATCCAATAAATCTTGA+AGG + chr5_3:13534325-13534344 Msa0800120:CDS 25.0%
! TCAACAACAATGACAAAAAT+TGG - chr5_3:13534391-13534410 None:intergenic 25.0%
!!! ATCATTTTTGCTTTGTATAG+AGG - chr5_3:13534577-13534596 None:intergenic 25.0%
! CAAAAGAAAAACATGAAAGA+GGG + chr5_3:13534640-13534659 Msa0800120:CDS 25.0%
!!! TCATCGGTTAACTTTAAAAT+TGG - chr5_3:13534757-13534776 None:intergenic 25.0%
!! TTCCAAATGTTCATTTTCAT+CGG - chr5_3:13534773-13534792 None:intergenic 25.0%
! ATTTGGAAGAAAATAATCCA+AGG + chr5_3:13534785-13534804 Msa0800120:CDS 25.0%
! TTTGGAAGAAAATAATCCAA+GGG + chr5_3:13534786-13534805 Msa0800120:CDS 25.0%
! AATGATAAGAAATCACTTGA+AGG + chr5_3:13534904-13534923 Msa0800120:CDS 25.0%
! ATGATAAGAAATCACTTGAA+GGG + chr5_3:13534905-13534924 Msa0800120:CDS 25.0%
! TTAGGATCAAATCATATTGA+TGG - chr5_3:13535137-13535156 None:intergenic 25.0%
! TCAATATGATTTGATCCTAA+TGG + chr5_3:13535137-13535156 Msa0800120:CDS 25.0%
! TTACAACTATGTACATTTCT+AGG - chr5_3:13535796-13535815 None:intergenic 25.0%
CTTTATGTTCATCAAGTTCA+AGG + chr5_3:13528882-13528901 Msa0800120:five_prime_UTR 30.0%
TACCTATATTTATTGCCCAT+TGG - chr5_3:13528911-13528930 None:intergenic 30.0%
! TATTCAGGTTTACCAATTCA+TGG + chr5_3:13528945-13528964 Msa0800120:CDS 30.0%
!!! GTTACTTTTCTTCCATGAAT+TGG - chr5_3:13528960-13528979 None:intergenic 30.0%
TAATGTTAGCCATCTTGATA+GGG + chr5_3:13529236-13529255 Msa0800120:CDS 30.0%
TGTGAAATGCCATGTTAATA+TGG - chr5_3:13529269-13529288 None:intergenic 30.0%
ATATTCCACATCCTCAAAAT+CGG - chr5_3:13529358-13529377 None:intergenic 30.0%
TAAGTCAGTTATGGCTAAAT+TGG + chr5_3:13529556-13529575 Msa0800120:intron 30.0%
!! ATTTGTCTCTGAAATAGTAG+AGG - chr5_3:13529792-13529811 None:intergenic 30.0%
AGGTTGAATTGATGAAATTC+AGG + chr5_3:13529988-13530007 Msa0800120:intron 30.0%
GGTTGAATTGATGAAATTCA+GGG + chr5_3:13529989-13530008 Msa0800120:intron 30.0%
AGGACATCCATAACAAAAAT+TGG - chr5_3:13530075-13530094 None:intergenic 30.0%
AGATCTTTCAAATTACTCCA+TGG + chr5_3:13530255-13530274 Msa0800120:CDS 30.0%
! ATGGTAACTTTTCAGCAATT+TGG + chr5_3:13530344-13530363 Msa0800120:CDS 30.0%
TTATTAGAAGAATCCCAAAC+AGG - chr5_3:13530541-13530560 None:intergenic 30.0%
!! AAAAGTATTATGGCTGTTGT+TGG + chr5_3:13530559-13530578 Msa0800120:CDS 30.0%
! ACAACTGCATTTTATAGTGT+TGG + chr5_3:13530586-13530605 Msa0800120:CDS 30.0%
! ATGTATTTGACTTCTCAACA+AGG + chr5_3:13530649-13530668 Msa0800120:CDS 30.0%
!!! ATATTTTTAGGTGATCACCA+AGG + chr5_3:13530948-13530967 Msa0800120:intron 30.0%
GAGGATCTTATATAAAACCT+TGG - chr5_3:13530968-13530987 None:intergenic 30.0%
AAGATCCTCAACTTTGATTA+TGG + chr5_3:13530979-13530998 Msa0800120:intron 30.0%
GATTATGGTTGCAATGATTA+AGG + chr5_3:13530994-13531013 Msa0800120:intron 30.0%
GTTCAATGAAGATTCATTGT+CGG - chr5_3:13531313-13531332 None:intergenic 30.0%
TCATTGAACTCTTTAAACTC+TGG + chr5_3:13531324-13531343 Msa0800120:intron 30.0%
TCTATTAAGCATAAAGTTGC+AGG + chr5_3:13531376-13531395 Msa0800120:intron 30.0%
TTACGTCGTAACAAAATGAT+TGG - chr5_3:13531443-13531462 None:intergenic 30.0%
! CATACCAAGAAAGTATATCA+TGG + chr5_3:13531488-13531507 Msa0800120:CDS 30.0%
TGAGAGATCTTTCAAAACAT+TGG + chr5_3:13531521-13531540 Msa0800120:CDS 30.0%
AAATAAACCTCATGTTTGCA+AGG - chr5_3:13531710-13531729 None:intergenic 30.0%
ATTCATTATAGGACATGACA+CGG - chr5_3:13531913-13531932 None:intergenic 30.0%
CCAATATGTTGTTAAGAAGA+CGG - chr5_3:13532116-13532135 None:intergenic 30.0%
AATTGAGAATCATACCAGAA+AGG - chr5_3:13532389-13532408 None:intergenic 30.0%
TTCTGGTATGATTCTCAATT+TGG + chr5_3:13532389-13532408 Msa0800120:intron 30.0%
TGTTCAAATTATAACCGGTA+TGG - chr5_3:13532471-13532490 None:intergenic 30.0%
GATATGCCAAAATTAGTTAG+AGG + chr5_3:13532670-13532689 Msa0800120:CDS 30.0%
! TTACTTGGTAGTTACAATAG+TGG + chr5_3:13532788-13532807 Msa0800120:intron 30.0%
TATTGTAAATGCATTACAGC+TGG + chr5_3:13532898-13532917 Msa0800120:intron 30.0%
GAGATAACAAAGTGATACTT+TGG + chr5_3:13533064-13533083 Msa0800120:CDS 30.0%
TATTTCCTATGTTGTGGTAT+AGG + chr5_3:13533193-13533212 Msa0800120:intron 30.0%
CTGAATCCTTTACTTATTTC+AGG + chr5_3:13533546-13533565 Msa0800120:intron 30.0%
! TTTTAGACCTAGTTTACCAA+AGG - chr5_3:13533734-13533753 None:intergenic 30.0%
!!! TGATTGTGTGATTGTTTTTG+AGG + chr5_3:13533806-13533825 Msa0800120:intron 30.0%
AGAAATCAAGGTTACCAAAA+AGG + chr5_3:13533899-13533918 Msa0800120:CDS 30.0%
! GCTTTAAATTTGACAGACAA+TGG + chr5_3:13533993-13534012 Msa0800120:CDS 30.0%
TAAATACTAAGTGTGAATGC+AGG + chr5_3:13534135-13534154 Msa0800120:intron 30.0%
GTAGAATAATAACATCGAAG+TGG + chr5_3:13534185-13534204 Msa0800120:CDS 30.0%
!! ATGGACTAACACAAATTTTG+AGG + chr5_3:13534251-13534270 Msa0800120:CDS 30.0%
! TGGACTAACACAAATTTTGA+GGG + chr5_3:13534252-13534271 Msa0800120:CDS 30.0%
TACTAAGCATCAAAGATATG+AGG + chr5_3:13534362-13534381 Msa0800120:CDS 30.0%
! TTTGTCATTGTTGTTGACAT+TGG + chr5_3:13534394-13534413 Msa0800120:CDS 30.0%
TTGACTTAAGCACAGATATA+TGG + chr5_3:13534422-13534441 Msa0800120:CDS 30.0%
AACTTCCTTCACAAGTATTT+CGG + chr5_3:13534457-13534476 Msa0800120:CDS 30.0%
GCAAAAGAAAAACATGAAAG+AGG + chr5_3:13534639-13534658 Msa0800120:CDS 30.0%
AACCGATGAAAATGAACATT+TGG + chr5_3:13534768-13534787 Msa0800120:CDS 30.0%
AAGATACACCAGTAATTCAA+AGG + chr5_3:13534947-13534966 Msa0800120:CDS 30.0%
AGATACACCAGTAATTCAAA+GGG + chr5_3:13534948-13534967 Msa0800120:CDS 30.0%
AGTGGATGCTCTTAATTATA+TGG + chr5_3:13535035-13535054 Msa0800120:CDS 30.0%
!! ATCTTGTATTTTTGTCCTTC+TGG - chr5_3:13535092-13535111 None:intergenic 30.0%
TGAACCAGAATAACAGTATT+AGG + chr5_3:13535171-13535190 Msa0800120:intron 30.0%
AAGTCCTAATACTGTTATTC+TGG - chr5_3:13535178-13535197 None:intergenic 30.0%
CTTGTGAAATTGTTTGACAT+AGG + chr5_3:13535239-13535258 Msa0800120:intron 30.0%
! TTATCAAGTATTGCTCCAAT+AGG + chr5_3:13535485-13535504 Msa0800120:intron 30.0%
TAATGCTTTATCTGTGTTTG+TGG + chr5_3:13535551-13535570 Msa0800120:intron 30.0%
AAAAGCAATAAGGAAATCAG+AGG + chr5_3:13535611-13535630 Msa0800120:CDS 30.0%
! TATGTACATTTCTAGGTTGT+TGG - chr5_3:13535789-13535808 None:intergenic 30.0%
AGTTCACTAGTATCAGTAAA+CGG + chr5_3:13535845-13535864 Msa0800120:three_prime_UTR 30.0%
ATATGATTGCACTTTGTTGA+AGG + chr5_3:13535895-13535914 Msa0800120:three_prime_UTR 30.0%
CTCCAATGGGCAATAAATAT+AGG + chr5_3:13528906-13528925 Msa0800120:exon 35.0%
AAGAAAAGTAACTCACCAAG+AGG + chr5_3:13528968-13528987 Msa0800120:CDS 35.0%
TGGAAAATTCTTCTACCTCT+TGG - chr5_3:13528986-13529005 None:intergenic 35.0%
!!! CTTCTTTTTCAACATCTCTG+TGG - chr5_3:13529006-13529025 None:intergenic 35.0%
!! ATCCTACTACAGTGTTTTTG+TGG + chr5_3:13529057-13529076 Msa0800120:CDS 35.0%
AACCACAAAAACACTGTAGT+AGG - chr5_3:13529062-13529081 None:intergenic 35.0%
TGTGGTTAGATTAGCAATCA+TGG + chr5_3:13529075-13529094 Msa0800120:CDS 35.0%
GTAATGTTAGCCATCTTGAT+AGG + chr5_3:13529235-13529254 Msa0800120:CDS 35.0%
GGCTATTGACCATATTAACA+TGG + chr5_3:13529257-13529276 Msa0800120:CDS 35.0%
!! TTCTGAAATTACAACAGCTC+AGG + chr5_3:13529390-13529409 Msa0800120:CDS 35.0%
TAGCTGCTACAAATAAAAGC+AGG - chr5_3:13530095-13530114 None:intergenic 35.0%
TGGGATGACAAAACAATTCA+TGG + chr5_3:13530325-13530344 Msa0800120:CDS 35.0%
GCTATGTTGATCAAATCTTC+TGG - chr5_3:13530430-13530449 None:intergenic 35.0%
GAAGATTTGATCAACATAGC+AGG + chr5_3:13530430-13530449 Msa0800120:CDS 35.0%
! TTTTCCTAATTCAACTCGTG+AGG + chr5_3:13530813-13530832 Msa0800120:CDS 35.0%
ATGTTGAGAATGCTAAGCTA+GGG + chr5_3:13530839-13530858 Msa0800120:CDS 35.0%
! AAGGAAGTCTCTTCAAGTTT+AGG - chr5_3:13530894-13530913 None:intergenic 35.0%
AAACTTGAAGAGACTTCCTT+TGG + chr5_3:13530894-13530913 Msa0800120:CDS 35.0%
TGCAACCATAATCAAAGTTG+AGG - chr5_3:13530987-13531006 None:intergenic 35.0%
TTAAGGTTCTTATGTCTCCA+TGG + chr5_3:13531011-13531030 Msa0800120:intron 35.0%
TTGAACTCTTTAAACTCTGG+TGG + chr5_3:13531327-13531346 Msa0800120:intron 35.0%
TGTCCCATGATATACTTTCT+TGG - chr5_3:13531495-13531514 None:intergenic 35.0%
! AAGAAAGTATATCATGGGAC+AGG + chr5_3:13531494-13531513 Msa0800120:CDS 35.0%
! ATTGACAAATGGAGTGTCAA+AGG + chr5_3:13531602-13531621 Msa0800120:CDS 35.0%
TAAGTCAACTTGAAGCAAGA+AGG + chr5_3:13531649-13531668 Msa0800120:CDS 35.0%
AATGTAAACAAATGTGTCGG+TGG - chr5_3:13531804-13531823 None:intergenic 35.0%
TGTATGACAGTCATGAACTA+AGG + chr5_3:13531977-13531996 Msa0800120:intron 35.0%
CCGTCTTCTTAACAACATAT+TGG + chr5_3:13532113-13532132 Msa0800120:CDS 35.0%
! GAGTCACCTCTAACTAATTT+TGG - chr5_3:13532679-13532698 None:intergenic 35.0%
AAATTAGTTAGAGGTGACTC+TGG + chr5_3:13532679-13532698 Msa0800120:CDS 35.0%
!! GATACTTTGGTTTGAAGTTG+AGG + chr5_3:13533077-13533096 Msa0800120:CDS 35.0%
ATTTCTACAGTCATTGCAGT+CGG - chr5_3:13533473-13533492 None:intergenic 35.0%
TCCTTTACTTATTTCAGGCA+TGG + chr5_3:13533551-13533570 Msa0800120:intron 35.0%
TCCATGCCTGAAATAAGTAA+AGG - chr5_3:13533555-13533574 None:intergenic 35.0%
TTTACTTATTTCAGGCATGG+AGG + chr5_3:13533554-13533573 Msa0800120:intron 35.0%
TTACTTATTTCAGGCATGGA+GGG + chr5_3:13533555-13533574 Msa0800120:intron 35.0%
CACATTTCCTTTGGTAAACT+AGG + chr5_3:13533724-13533743 Msa0800120:intron 35.0%
CATTATTATTGTTGGATGGC+AGG + chr5_3:13533860-13533879 Msa0800120:intron 35.0%
AATCAAGGTTACCAAAAAGG+AGG + chr5_3:13533902-13533921 Msa0800120:CDS 35.0%
ATCAAGGTTACCAAAAAGGA+GGG + chr5_3:13533903-13533922 Msa0800120:CDS 35.0%
TTTGCTTCTTAGTGTACCAA+TGG + chr5_3:13533950-13533969 Msa0800120:CDS 35.0%
TCGAAGTGGTTAACCAAAAA+AGG + chr5_3:13534199-13534218 Msa0800120:CDS 35.0%
CGAAGTGGTTAACCAAAAAA+GGG + chr5_3:13534200-13534219 Msa0800120:CDS 35.0%
GAAGTGGTTAACCAAAAAAG+GGG + chr5_3:13534201-13534220 Msa0800120:CDS 35.0%
!! TTTAGCTTTGTTGTCTTCAG+AGG - chr5_3:13534827-13534846 None:intergenic 35.0%
TTGCAACACAAGCTTATGAT+AGG + chr5_3:13534857-13534876 Msa0800120:CDS 35.0%
TGCAACACAAGCTTATGATA+GGG + chr5_3:13534858-13534877 Msa0800120:CDS 35.0%
AGAAATCACTTGAAGGGTTA+AGG + chr5_3:13534911-13534930 Msa0800120:CDS 35.0%
!! TTTGATCCTAATGGATTGTC+AGG + chr5_3:13535146-13535165 Msa0800120:CDS 35.0%
TTCATACCTGACAATCCATT+AGG - chr5_3:13535155-13535174 None:intergenic 35.0%
ACGCATTTGAGCTTATTTAC+TGG + chr5_3:13535208-13535227 Msa0800120:intron 35.0%
TGTTTGACATAGGTCATGTT+TGG + chr5_3:13535249-13535268 Msa0800120:intron 35.0%
! AAAATTACACTTGTGTTGGC+CGG + chr5_3:13535319-13535338 Msa0800120:intron 35.0%
GGAAAATTAGATGCCAAAGA+TGG + chr5_3:13535572-13535591 Msa0800120:intron 35.0%
AATTAGATGCCAAAGATGGA+TGG + chr5_3:13535576-13535595 Msa0800120:intron 35.0%
ATGAGGCAACAAAAGCAATA+AGG + chr5_3:13535601-13535620 Msa0800120:CDS 35.0%
TTCATCACAAGACATTGCAT+GGG - chr5_3:13535676-13535695 None:intergenic 35.0%
ACCATAAGCTTGAAGTCAAT+TGG - chr5_3:13535741-13535760 None:intergenic 35.0%
TGATACTAGTGAACTCAGTA+AGG - chr5_3:13535840-13535859 None:intergenic 35.0%
ATCAAGTTCAAGGTCTCCAA+TGG + chr5_3:13528892-13528911 Msa0800120:exon 40.0%
TCAAGTTCAAGGTCTCCAAT+GGG + chr5_3:13528893-13528912 Msa0800120:exon 40.0%
GACAGTGACTACTAGCATAT+TGG - chr5_3:13529033-13529052 None:intergenic 40.0%
TCATTGAGTAGTTTGGCGTA+TGG + chr5_3:13529307-13529326 Msa0800120:CDS 40.0%
AGCAGCTATATGAAGCAATG+AGG + chr5_3:13530107-13530126 Msa0800120:intron 40.0%
GCAGCTATATGAAGCAATGA+GGG + chr5_3:13530108-13530127 Msa0800120:intron 40.0%
! CCAAGCTTGATGAGTTGAAA+GGG - chr5_3:13530308-13530327 None:intergenic 40.0%
CCTTTCAACTCATCAAGCTT+GGG + chr5_3:13530306-13530325 Msa0800120:CDS 40.0%
TACAGATTCGCCTTTGCTTT+CGG + chr5_3:13530507-13530526 Msa0800120:CDS 40.0%
GAGTTAGTTGAGATGCATAG+TGG + chr5_3:13530622-13530641 Msa0800120:CDS 40.0%
TAATAAGACTTGGAGCTGAG+TGG + chr5_3:13530767-13530786 Msa0800120:CDS 40.0%
AGTGGTTGCAGAGAACTTAT+GGG + chr5_3:13530785-13530804 Msa0800120:CDS 40.0%
! TGAACCTCACGAGTTGAATT+AGG - chr5_3:13530820-13530839 None:intergenic 40.0%
CATGTTGAGAATGCTAAGCT+AGG + chr5_3:13530838-13530857 Msa0800120:CDS 40.0%
ATATGACTGATGTCTCGACA+AGG - chr5_3:13531037-13531056 None:intergenic 40.0%
ATATGACTGATGTCTCGACA+AGG - chr5_3:13531037-13531056 None:intergenic 40.0%
AACTCTTTAAACTCTGGTGG+TGG + chr5_3:13531330-13531349 Msa0800120:intron 40.0%
TTACGACGTAAACTTTGTGC+AGG + chr5_3:13531452-13531471 Msa0800120:intron 40.0%
AAAGTATATCATGGGACAGG+TGG + chr5_3:13531497-13531516 Msa0800120:CDS 40.0%
TCAACTTGAAGCAAGAAGGA+AGG + chr5_3:13531653-13531672 Msa0800120:CDS 40.0%
GTCAATTCCTTGCAAACATG+AGG + chr5_3:13531700-13531719 Msa0800120:CDS 40.0%
TCATGAACTAAGGACACCTA+TGG + chr5_3:13531987-13532006 Msa0800120:CDS 40.0%
AATCCAATTACTGCTGCCAT+AGG - chr5_3:13532006-13532025 None:intergenic 40.0%
CAACATATTGGATCTGAGCA+AGG + chr5_3:13532125-13532144 Msa0800120:CDS 40.0%
TATTGGATCTGAGCAAGGTA+TGG + chr5_3:13532130-13532149 Msa0800120:intron 40.0%
TACACTATATAGGTGGAGTC+TGG + chr5_3:13532255-13532274 Msa0800120:intron 40.0%
AGAAGATGCAGAATTCGACT+TGG + chr5_3:13532290-13532309 Msa0800120:CDS 40.0%
GAAGATGCAGAATTCGACTT+GGG + chr5_3:13532291-13532310 Msa0800120:CDS 40.0%
!! GAGACTGTTTTAGACCTTTC+TGG + chr5_3:13532372-13532391 Msa0800120:CDS 40.0%
TCTCAGTGTCAGTACTTCAT+AGG - chr5_3:13532421-13532440 None:intergenic 40.0%
!! ATGAAGTACTGACACTGAGA+CGG + chr5_3:13532421-13532440 Msa0800120:intron 40.0%
CAACACTGAAATGTCCATAC+CGG + chr5_3:13532454-13532473 Msa0800120:intron 40.0%
! CTCTTTGCATGACTTGCATT+TGG - chr5_3:13533033-13533052 None:intergenic 40.0%
CGATACCTATACCACAACAT+AGG - chr5_3:13533201-13533220 None:intergenic 40.0%
!! TAGGTATCGATCCAAGCAAA+TGG + chr5_3:13533212-13533231 Msa0800120:intron 40.0%
!! AGGTATCGATCCAAGCAAAT+GGG + chr5_3:13533213-13533232 Msa0800120:intron 40.0%
AACACAGAATCCCATTTGCT+TGG - chr5_3:13533226-13533245 None:intergenic 40.0%
GCTTACAGTCTAGTAGTTGA+TGG - chr5_3:13533271-13533290 None:intergenic 40.0%
TCTTTGCATCGTTAGGAACT+TGG + chr5_3:13533589-13533608 Msa0800120:CDS 40.0%
TTGGACTGTAGGATCAACAT+CGG - chr5_3:13533773-13533792 None:intergenic 40.0%
GTTGATCCTACAGTCCAAAT+CGG + chr5_3:13533775-13533794 Msa0800120:intron 40.0%
TTGATCCTACAGTCCAAATC+GGG + chr5_3:13533776-13533795 Msa0800120:intron 40.0%
TGGATGGCAGGTTAATAAGA+TGG + chr5_3:13533872-13533891 Msa0800120:intron 40.0%
GGATGGCAGGTTAATAAGAT+GGG + chr5_3:13533873-13533892 Msa0800120:intron 40.0%
TAAGATGGGTGGAGAAATCA+AGG + chr5_3:13533887-13533906 Msa0800120:CDS 40.0%
TGTTGTTCTGTGACATCCAT+TGG - chr5_3:13533969-13533988 None:intergenic 40.0%
TTTGACAGACAATGGCTTAG+TGG + chr5_3:13534001-13534020 Msa0800120:CDS 40.0%
CTTGCACTACAAGGCAATAT+GGG + chr5_3:13534163-13534182 Msa0800120:CDS 40.0%
!! ATGGAAGCATCTGAATGGAA+TGG + chr5_3:13534232-13534251 Msa0800120:CDS 40.0%
CTCTTCCGAAATACTTGTGA+AGG - chr5_3:13534465-13534484 None:intergenic 40.0%
TCGGAAGAGCAAAATTTGTG+TGG + chr5_3:13534476-13534495 Msa0800120:CDS 40.0%
TCGGAAAGGACACTTACTAA+TGG + chr5_3:13534543-13534562 Msa0800120:CDS 40.0%
GTACAAGATTCTTCTTCCCT+TGG - chr5_3:13534805-13534824 None:intergenic 40.0%
AAGCTTATGATAGGGTGACA+AGG + chr5_3:13534866-13534885 Msa0800120:CDS 40.0%
GTTGCAACCCTTTGAATTAC+TGG - chr5_3:13534958-13534977 None:intergenic 40.0%
! CTTTAGAGAAGCACACTTCA+AGG - chr5_3:13535363-13535382 None:intergenic 40.0%
CTTGAAGTGTGCTTCTCTAA+AGG + chr5_3:13535361-13535380 Msa0800120:intron 40.0%
CTAAACTAGCCCACTGAAAT+AGG - chr5_3:13535411-13535430 None:intergenic 40.0%
GCAATAAGGAAATCAGAGGA+AGG + chr5_3:13535615-13535634 Msa0800120:CDS 40.0%
CTTCATCACAAGACATTGCA+TGG - chr5_3:13535677-13535696 None:intergenic 40.0%
TGATGAAGCCAAATGCCTTA+AGG + chr5_3:13535689-13535708 Msa0800120:CDS 40.0%
! GCCAATTGACTTCAAGCTTA+TGG + chr5_3:13535737-13535756 Msa0800120:CDS 40.0%
TGGTTTAGTGAGTGAGAGAA+TGG - chr5_3:13535769-13535788 None:intergenic 40.0%
GGTCAATAGCCCTATCAAGA+TGG - chr5_3:13529248-13529267 None:intergenic 45.0%
! TTCTGCAACGTCCGATTTTG+AGG + chr5_3:13529344-13529363 Msa0800120:CDS 45.0%
!! AACGTCCGATTTTGAGGATG+TGG + chr5_3:13529350-13529369 Msa0800120:CDS 45.0%
ATCTCAAGCTGAGCAAGTTG+AGG + chr5_3:13529456-13529475 Msa0800120:CDS 45.0%
AAGCAATGAGGGCAGTAACA+TGG + chr5_3:13530119-13530138 Msa0800120:CDS 45.0%
!! GTTTGAGGTTGATGCAACCA+TGG - chr5_3:13530275-13530294 None:intergenic 45.0%
GGTTGCATCAACCTCAAACA+TGG + chr5_3:13530276-13530295 Msa0800120:CDS 45.0%
AAGGGACTTGACCATGTTTG+AGG - chr5_3:13530290-13530309 None:intergenic 45.0%
CCCTTTCAACTCATCAAGCT+TGG + chr5_3:13530305-13530324 Msa0800120:CDS 45.0%
! CCCAAGCTTGATGAGTTGAA+AGG - chr5_3:13530309-13530328 None:intergenic 45.0%
CCTGTCACAGGCGAAAAAAT+CGG + chr5_3:13530385-13530404 Msa0800120:CDS 45.0%
AGCAGGACTTTCACAAGTTC+CGG + chr5_3:13530447-13530466 Msa0800120:CDS 45.0%
TTTCGGCAGCTTTACCTGTT+TGG + chr5_3:13530524-13530543 Msa0800120:CDS 45.0%
TTCGGCAGCTTTACCTGTTT+GGG + chr5_3:13530525-13530544 Msa0800120:CDS 45.0%
! ACAGCCATCTTAAGCTTTGG+TGG - chr5_3:13530730-13530749 None:intergenic 45.0%
ACCAAAGCTTAAGATGGCTG+TGG + chr5_3:13530729-13530748 Msa0800120:CDS 45.0%
TCCACAGCCATCTTAAGCTT+TGG - chr5_3:13530733-13530752 None:intergenic 45.0%
GAGTGGTTGCAGAGAACTTA+TGG + chr5_3:13530784-13530803 Msa0800120:CDS 45.0%
GACGTAAACTTTGTGCAGGT+AGG + chr5_3:13531456-13531475 Msa0800120:intron 45.0%
ACACCTATGGCAGCAGTAAT+TGG + chr5_3:13532000-13532019 Msa0800120:CDS 45.0%
!! TCGTATGTGTTGGTGTTGTC+TGG + chr5_3:13532511-13532530 Msa0800120:intron 45.0%
ACTCCTTCAATCTGTCGTGT+CGG + chr5_3:13532536-13532555 Msa0800120:intron 45.0%
GTCATGTTATTCTGCGAGGA+TGG + chr5_3:13532920-13532939 Msa0800120:CDS 45.0%
GGACTATCGTTGCAAGAGTT+TGG - chr5_3:13532955-13532974 None:intergenic 45.0%
! TGGTTTGAAGTTGAGGACAC+AGG + chr5_3:13533084-13533103 Msa0800120:CDS 45.0%
AGTCGGCTGATCTAAATCGT+TGG - chr5_3:13533456-13533475 None:intergenic 45.0%
GTCTAGGTCTTTGCATCGTT+AGG + chr5_3:13533582-13533601 Msa0800120:CDS 45.0%
TGGACTGTAGGATCAACATC+GGG - chr5_3:13533772-13533791 None:intergenic 45.0%
TGATCCTACAGTCCAAATCG+GGG + chr5_3:13533777-13533796 Msa0800120:intron 45.0%
CAATCACACATTCCCCGATT+TGG - chr5_3:13533792-13533811 None:intergenic 45.0%
TGGCAGGTTAATAAGATGGG+TGG + chr5_3:13533876-13533895 Msa0800120:intron 45.0%
GTTACCAAAAAGGAGGGTCA+AGG + chr5_3:13533909-13533928 Msa0800120:CDS 45.0%
! TGTTCCTTGACCCTCCTTTT+TGG - chr5_3:13533916-13533935 None:intergenic 45.0%
! CAGGTATTGCTTGCACTACA+AGG + chr5_3:13534154-13534173 Msa0800120:intron 45.0%
GCTTGCACTACAAGGCAATA+TGG + chr5_3:13534162-13534181 Msa0800120:CDS 45.0%
!!! CATTGTGCACACCCCTTTTT+TGG - chr5_3:13534215-13534234 None:intergenic 45.0%
! CAAAAAAGGGGTGTGCACAA+TGG + chr5_3:13534213-13534232 Msa0800120:CDS 45.0%
!! GCACAATGGAAGCATCTGAA+TGG + chr5_3:13534227-13534246 Msa0800120:CDS 45.0%
CCATAAAGACTGAGCTTCGT+CGG + chr5_3:13534524-13534543 Msa0800120:CDS 45.0%
! GTTGTTGTTGCTGTAGGTGA+TGG + chr5_3:13535003-13535022 Msa0800120:CDS 45.0%
TAGAAGAGAGTCTCTCCAGA+AGG + chr5_3:13535074-13535093 Msa0800120:CDS 45.0%
! TGTGCTTCTCTAAAGGTCTC+AGG + chr5_3:13535368-13535387 Msa0800120:intron 45.0%
GCCAAAGATGGATGGATATG+AGG + chr5_3:13535584-13535603 Msa0800120:CDS 45.0%
GCCTCATATCCATCCATCTT+TGG - chr5_3:13535588-13535607 None:intergenic 45.0%
AGGAAATCAGAGGAAGGAAC+AGG + chr5_3:13535621-13535640 Msa0800120:CDS 45.0%
TGGGCTGTTAGAGCAACAAT+TGG - chr5_3:13535657-13535676 None:intergenic 45.0%
GAAGCCAAATGCCTTAAGGT+TGG + chr5_3:13535693-13535712 Msa0800120:CDS 45.0%
! CATGCCAACCTTAAGGCATT+TGG - chr5_3:13535700-13535719 None:intergenic 45.0%
CAAATGCCTTAAGGTTGGCA+TGG + chr5_3:13535698-13535717 Msa0800120:CDS 45.0%
AAGCATCCATGCCAACCTTA+AGG - chr5_3:13535707-13535726 None:intergenic 45.0%
ACTTGCTCAGCTTGAGATGC+AGG - chr5_3:13529454-13529473 None:intergenic 50.0%
GAACCACTTGATCCTGTCAC+AGG + chr5_3:13530373-13530392 Msa0800120:CDS 50.0%
!!! CCGATTTTTTCGCCTGTGAC+AGG - chr5_3:13530388-13530407 None:intergenic 50.0%
GGACTTTCACAAGTTCCGGA+TGG + chr5_3:13530451-13530470 Msa0800120:CDS 50.0%
TTCCGGATGGTGTAGCTACA+TGG + chr5_3:13530464-13530483 Msa0800120:CDS 50.0%
TGCCATGTAGCTACACCATC+CGG - chr5_3:13530469-13530488 None:intergenic 50.0%
GGTAAAGCTGCCGAAAGCAA+AGG - chr5_3:13530520-13530539 None:intergenic 50.0%
GCCACCACCAAAGCTTAAGA+TGG + chr5_3:13530723-13530742 Msa0800120:CDS 50.0%
! GCCATCTTAAGCTTTGGTGG+TGG - chr5_3:13530727-13530746 None:intergenic 50.0%
TGAAGCAAGAAGGAAGGCAG+AGG + chr5_3:13531659-13531678 Msa0800120:CDS 50.0%
ACTTGGGACGCGAACTTGAA+GGG + chr5_3:13532307-13532326 Msa0800120:CDS 50.0%
TAGTTAGAGGTGACTCTGGC+AGG + chr5_3:13532683-13532702 Msa0800120:CDS 50.0%
AGTTAGAGGTGACTCTGGCA+GGG + chr5_3:13532684-13532703 Msa0800120:CDS 50.0%
GCTGGTCATGTTATTCTGCG+AGG + chr5_3:13532916-13532935 Msa0800120:intron 50.0%
TATTTCAGGCATGGAGGGAC+TGG + chr5_3:13533560-13533579 Msa0800120:intron 50.0%
ACTGTAGGATCAACATCGGG+CGG - chr5_3:13533769-13533788 None:intergenic 50.0%
!! CATTCCCCGATTTGGACTGT+AGG - chr5_3:13533784-13533803 None:intergenic 50.0%
CCGACGAAGCTCAGTCTTTA+TGG - chr5_3:13534527-13534546 None:intergenic 50.0%
AAGACTGAGCTTCGTCGGAA+AGG + chr5_3:13534529-13534548 Msa0800120:CDS 50.0%
! GGAGCTGTTGTTGTTGCTGT+AGG + chr5_3:13534997-13535016 Msa0800120:CDS 50.0%
!! AGGTGATGGACAACAAGCAG+TGG + chr5_3:13535017-13535036 Msa0800120:CDS 50.0%
! ATTACACTTGTGTTGGCCGG+TGG + chr5_3:13535322-13535341 Msa0800120:intron 50.0%
TAGCCCACTGAAATAGGCAC+CGG - chr5_3:13535405-13535424 None:intergenic 50.0%
TCGCCTGTGACAGGATCAAG+TGG - chr5_3:13530379-13530398 None:intergenic 55.0%
CTGATGTCTCGACAAGGCCA+TGG - chr5_3:13531031-13531050 None:intergenic 55.0%
CTGATGTCTCGACAAGGCCA+TGG - chr5_3:13531031-13531050 None:intergenic 55.0%
GACTTGGGACGCGAACTTGA+AGG + chr5_3:13532306-13532325 Msa0800120:CDS 55.0%
! GCACCGACACGACAGATTGA+AGG - chr5_3:13532542-13532561 None:intergenic 55.0%
!! CTGTCGTGTCGGTGCTACAT+AGG + chr5_3:13532547-13532566 Msa0800120:intron 55.0%
GAAGTTGAGGACACAGGCTG+TGG + chr5_3:13533090-13533109 Msa0800120:CDS 55.0%
GTCTCTCAAGCCAACACCAC+CGG - chr5_3:13535341-13535360 None:intergenic 55.0%
GTCTCAGGCTCAATTCTCCC+CGG + chr5_3:13535383-13535402 Msa0800120:intron 55.0%
TCCCCGGTGCCTATTTCAGT+GGG + chr5_3:13535399-13535418 Msa0800120:intron 55.0%
AGCCCACTGAAATAGGCACC+GGG - chr5_3:13535404-13535423 None:intergenic 55.0%
TAGAGGTGACTCTGGCAGGG+TGG + chr5_3:13532687-13532706 Msa0800120:CDS 60.0%
!! AGGCATGGAGGGACTGGTCT+AGG + chr5_3:13533566-13533585 Msa0800120:intron 60.0%
! CTTGTGTTGGCCGGTGGTGT+TGG + chr5_3:13535328-13535347 Msa0800120:intron 60.0%
CTCCCCGGTGCCTATTTCAG+TGG + chr5_3:13535398-13535417 Msa0800120:intron 60.0%
! GCCCACTGAAATAGGCACCG+GGG - chr5_3:13535403-13535422 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr5_3 gene 13528831 13535988 13528831 ID=Msa0800120;Name=Msa0800120
chr5_3 mRNA 13528831 13535988 13528831 ID=Msa0800120-mRNA-1;Parent=Msa0800120;Name=Msa0800120-mRNA-1;_AED=0.08;_eAED=0.08;_QI=80|0.91|0.92|1|1|1|13|191|1178
chr5_3 exon 13528831 13529096 13528831 ID=Msa0800120-mRNA-1:exon:5570;Parent=Msa0800120-mRNA-1
chr5_3 exon 13529235 13529477 13529235 ID=Msa0800120-mRNA-1:exon:5571;Parent=Msa0800120-mRNA-1
chr5_3 exon 13530109 13530915 13530109 ID=Msa0800120-mRNA-1:exon:5572;Parent=Msa0800120-mRNA-1
chr5_3 exon 13531474 13531721 13531474 ID=Msa0800120-mRNA-1:exon:5573;Parent=Msa0800120-mRNA-1
chr5_3 exon 13531987 13532146 13531987 ID=Msa0800120-mRNA-1:exon:5574;Parent=Msa0800120-mRNA-1
chr5_3 exon 13532267 13532393 13532267 ID=Msa0800120-mRNA-1:exon:5575;Parent=Msa0800120-mRNA-1
chr5_3 exon 13532668 13532757 13532668 ID=Msa0800120-mRNA-1:exon:5576;Parent=Msa0800120-mRNA-1
chr5_3 exon 13532917 13533111 13532917 ID=Msa0800120-mRNA-1:exon:5577;Parent=Msa0800120-mRNA-1
chr5_3 exon 13533215 13533284 13533215 ID=Msa0800120-mRNA-1:exon:5578;Parent=Msa0800120-mRNA-1
chr5_3 exon 13533568 13533610 13533568 ID=Msa0800120-mRNA-1:exon:5579;Parent=Msa0800120-mRNA-1
chr5_3 exon 13533882 13534022 13533882 ID=Msa0800120-mRNA-1:exon:5580;Parent=Msa0800120-mRNA-1
chr5_3 exon 13534157 13535167 13534157 ID=Msa0800120-mRNA-1:exon:5581;Parent=Msa0800120-mRNA-1
chr5_3 exon 13535582 13535988 13535582 ID=Msa0800120-mRNA-1:exon:5582;Parent=Msa0800120-mRNA-1
chr5_3 five_prime_UTR 13528831 13528910 13528831 ID=Msa0800120-mRNA-1:five_prime_utr;Parent=Msa0800120-mRNA-1
chr5_3 CDS 13528911 13529096 13528911 ID=Msa0800120-mRNA-1:cds;Parent=Msa0800120-mRNA-1
chr5_3 CDS 13529235 13529477 13529235 ID=Msa0800120-mRNA-1:cds;Parent=Msa0800120-mRNA-1
chr5_3 CDS 13530109 13530915 13530109 ID=Msa0800120-mRNA-1:cds;Parent=Msa0800120-mRNA-1
chr5_3 CDS 13531474 13531721 13531474 ID=Msa0800120-mRNA-1:cds;Parent=Msa0800120-mRNA-1
chr5_3 CDS 13531987 13532146 13531987 ID=Msa0800120-mRNA-1:cds;Parent=Msa0800120-mRNA-1
chr5_3 CDS 13532267 13532393 13532267 ID=Msa0800120-mRNA-1:cds;Parent=Msa0800120-mRNA-1
chr5_3 CDS 13532668 13532757 13532668 ID=Msa0800120-mRNA-1:cds;Parent=Msa0800120-mRNA-1
chr5_3 CDS 13532917 13533111 13532917 ID=Msa0800120-mRNA-1:cds;Parent=Msa0800120-mRNA-1
chr5_3 CDS 13533215 13533284 13533215 ID=Msa0800120-mRNA-1:cds;Parent=Msa0800120-mRNA-1
chr5_3 CDS 13533568 13533610 13533568 ID=Msa0800120-mRNA-1:cds;Parent=Msa0800120-mRNA-1
chr5_3 CDS 13533882 13534022 13533882 ID=Msa0800120-mRNA-1:cds;Parent=Msa0800120-mRNA-1
chr5_3 CDS 13534157 13535167 13534157 ID=Msa0800120-mRNA-1:cds;Parent=Msa0800120-mRNA-1
chr5_3 CDS 13535582 13535797 13535582 ID=Msa0800120-mRNA-1:cds;Parent=Msa0800120-mRNA-1
chr5_3 three_prime_UTR 13535798 13535988 13535798 ID=Msa0800120-mRNA-1:three_prime_utr;Parent=Msa0800120-mRNA-1
Gene Sequence

>Msa0800120

ATGGGCAATAAATATAGGTACATGTTTAATAGACTATTCAGGTTTACCAATTCATGGAAGAAAAGTAACTCACCAAGAGGTAGAAGAATTTTCCACAGAGATGTTGAAAAAGAAGAATTCCAATATGCTAGTAGTCACTGTCTTTCATCCTACTACAGTGTTTTTGTGGTTAGATTAGCAATCATGGTAATGTTAGCCATCTTGATAGGGCTATTGACCATATTAACATGGCATTTCACAAAGATTTATACGAAAAAATCATTGAGTAGTTTGGCGTATGGTCTGCGTTATGAACTTCTGCAACGTCCGATTTTGAGGATGTGGAATATTTTGAATTCTACTTCTGAAATTACAACAGCTCAGGTCAAGTTGTCTCAATATGTGATCAGACGTTATAGCAATCCTGCATCTCAAGCTGAGCAAGTTGAGCAGCTATATGAAGCAATGAGGGCAGTAACATGGTCACTATTTGCTAGTAGAAAAGCACTAAACTCAATAACAATCAATTACAAGAATGGATTTGTTCAAGCATTCCATAGAGATCTAAAAGATAACAACACATTTTACATCTACTCAGATCTTTCAAATTACTCCATGGTTGCATCAACCTCAAACATGGTCAAGTCCCTTTCAACTCATCAAGCTTGGGATGACAAAACAATTCATGGTAACTTTTCAGCAATTTGGTATAGAGAACCACTTGATCCTGTCACAGGCGAAAAAATCGGAAAAGCAATGAAAATTGCACCAGAAGATTTGATCAACATAGCAGGACTTTCACAAGTTCCGGATGGTGTAGCTACATGGCATGTAGCAGTTAGTAAATTTACAGATTCGCCTTTGCTTTCGGCAGCTTTACCTGTTTGGGATTCTTCTAATAAAAGTATTATGGCTGTTGTTGGTGTTACAACTGCATTTTATAGTGTTGGACAGTTAATGAGAGAGTTAGTTGAGATGCATAGTGGTCACATGTATTTGACTTCTCAACAAGGCTATTTACTTGCAACTTCTACTAGTGCACCGTTACTTACAAATTCGACTAAGCCACCACCAAAGCTTAAGATGGCTGTGGATTGTGAAGATGATATAATAAGACTTGGAGCTGAGTGGTTGCAGAGAACTTATGGGAATCATTTTCCTAATTCAACTCGTGAGGTTCATGTTGAGAATGCTAAGCTAGGGAATCAGCAATATTATATTGACTCGTTCTACCTAAACTTGAAGAGACTTCCTTTGGTAGGTGTAATCATCATACCAAGAAAGTATATCATGGGACAGGTGGATGAGAGATCTTTCAAAACATTGGTTATTCTGATATCTGCATCTTTATGCATTTTTGTCATTGGATGTGTTTGCATTTTGATATTGACAAATGGAGTGTCAAAGGAAATGAATCTGAGAGCAGAACTGATAAGTCAACTTGAAGCAAGAAGGAAGGCAGAGGCATCAAGCAACTATAAAAGTCAATTCCTTGCAAACATGAGTCATGAACTAAGGACACCTATGGCAGCAGTAATTGGATTGCTTGACATTCTTATATCTGATGATTGTCTCACAAATGAACAATATTCAACAGTTACTCAAATAAGAAAATGTTCAACAGCTCTTCTCCGTCTTCTTAACAACATATTGGATCTGAGCAAGGTGGAGTCTGGAAAACTTGTACTAGAAGATGCAGAATTCGACTTGGGACGCGAACTTGAAGGGCTTGTAGATATGTTTTCTGTTCAGTGCATTAATCACAATGTAGAGACTGTTTTAGACCTTTCTGATGATATGCCAAAATTAGTTAGAGGTGACTCTGGCAGGGTGGTTCAAGTATTTGCAAATTTGATCAACAATTCAATTAAGTTTACTACATCTGGTCATGTTATTCTGCGAGGATGGTGTGAATATCCAAACTCTTGCAACGATAGTCCGAATTTTTATCTTGATCAGAAGAAATCAAGAAATTTACATAAGAGCAAAGAGAAGCCAAATGCAAGTCATGCAAAGAGAATATCTATGAGAGATAACAAAGTGATACTTTGGTTTGAAGTTGAGGACACAGGCTGTGGTATCGATCCAAGCAAATGGGATTCTGTGTTTGAAAGCTTTGAGCAAGCTGATCCATCAACTACTAGACTGCATGGAGGGACTGGTCTAGGTCTTTGCATCGTTAGGAACTTGGTTAATAAGATGGGTGGAGAAATCAAGGTTACCAAAAAGGAGGGTCAAGGAACATTGATGAGATTATGTTTGCTTCTTAGTGTACCAATGGATGTCACAGAACAACATAGTGCTTTAAATTTGACAGACAATGGCTTAGTGGTATTGCTTGCACTACAAGGCAATATGGGTAGAATAATAACATCGAAGTGGTTAACCAAAAAAGGGGTGTGCACAATGGAAGCATCTGAATGGAATGGACTAACACAAATTTTGAGGGAACTCTTTCATGCAAGAAGTTCAGTCCATAACAATAACAACTTTGATGCACATTATCCAATAAATCTTGAAGGATTTAAGTCTAAACTACTAAGCATCAAAGATATGAGGAATCCAATTTTTGTCATTGTTGTTGACATTGGTTTGCTTGACTTAAGCACAGATATATGGAAAGAACAACTTAACTTCCTTCACAAGTATTTCGGAAGAGCAAAATTTGTGTGGATTCTGAATCATGACACATCAAATACCATAAAGACTGAGCTTCGTCGGAAAGGACACTTACTAATGGTTAACAAACCTCTATACAAAGCAAAAATGATTCATATTTTGGAAGCTGTTATAAAAGAGAGAAATCTTGAGTTGCAAAAGAAAAACATGAAAGAGGGTGATTTGCATGAGTTTCTTGAGATTGATTCTACTCAATTTGAAGCTGCTACTAGCTCTGATGATTCAGATATATCTGAAATTAGTGAAAAACCAATTTTAAAGTTAACCGATGAAAATGAACATTTGGAAGAAAATAATCCAAGGGAAGAAGAATCTTGTACCTCTGAAGACAACAAAGCTAAAGAAACAAACTTTGCAACACAAGCTTATGATAGGGTGACAAGGTCAAGAAAAGAAGTGAATGATAAGAAATCACTTGAAGGGTTAAGGATTTTGCTTGCAGAAGATACACCAGTAATTCAAAGGGTTGCAACAATAATGCTTGAAAAAATGGGAGCTGTTGTTGTTGCTGTAGGTGATGGACAACAAGCAGTGGATGCTCTTAATTATATGGTAAGTGCTGAAGATTGTAGAAGAGAGTCTCTCCAGAAGGACAAAAATACAAGATCACAAACAGAAATTTTGACTTGCCATCAATATGATTTGATCCTAATGGATTGTCAGATGCCAAAGATGGATGGATATGAGGCAACAAAAGCAATAAGGAAATCAGAGGAAGGAACAGGCAAACACATTCCAATTGTTGCTCTAACAGCCCATGCAATGTCTTGTGATGAAGCCAAATGCCTTAAGGTTGGCATGGATGCTTACTTAACAAAGCCAATTGACTTCAAGCTTATGGTCTCAACCATTCTCTCACTCACTAAACCAACAACCTAG
Protein sequence

>Msa0800120

MGNKYRYMFNRLFRFTNSWKKSNSPRGRRIFHRDVEKEEFQYASSHCLSSYYSVFVVRLAIMVMLAILIGLLTILTWHFTKIYTKKSLSSLAYGLRYELLQRPILRMWNILNSTSEITTAQVKLSQYVIRRYSNPASQAEQVEQLYEAMRAVTWSLFASRKALNSITINYKNGFVQAFHRDLKDNNTFYIYSDLSNYSMVASTSNMVKSLSTHQAWDDKTIHGNFSAIWYREPLDPVTGEKIGKAMKIAPEDLINIAGLSQVPDGVATWHVAVSKFTDSPLLSAALPVWDSSNKSIMAVVGVTTAFYSVGQLMRELVEMHSGHMYLTSQQGYLLATSTSAPLLTNSTKPPPKLKMAVDCEDDIIRLGAEWLQRTYGNHFPNSTREVHVENAKLGNQQYYIDSFYLNLKRLPLVGVIIIPRKYIMGQVDERSFKTLVILISASLCIFVIGCVCILILTNGVSKEMNLRAELISQLEARRKAEASSNYKSQFLANMSHELRTPMAAVIGLLDILISDDCLTNEQYSTVTQIRKCSTALLRLLNNILDLSKVESGKLVLEDAEFDLGRELEGLVDMFSVQCINHNVETVLDLSDDMPKLVRGDSGRVVQVFANLINNSIKFTTSGHVILRGWCEYPNSCNDSPNFYLDQKKSRNLHKSKEKPNASHAKRISMRDNKVILWFEVEDTGCGIDPSKWDSVFESFEQADPSTTRLHGGTGLGLCIVRNLVNKMGGEIKVTKKEGQGTLMRLCLLLSVPMDVTEQHSALNLTDNGLVVLLALQGNMGRIITSKWLTKKGVCTMEASEWNGLTQILRELFHARSSVHNNNNFDAHYPINLEGFKSKLLSIKDMRNPIFVIVVDIGLLDLSTDIWKEQLNFLHKYFGRAKFVWILNHDTSNTIKTELRRKGHLLMVNKPLYKAKMIHILEAVIKERNLELQKKNMKEGDLHEFLEIDSTQFEAATSSDDSDISEISEKPILKLTDENEHLEENNPREEESCTSEDNKAKETNFATQAYDRVTRSRKEVNDKKSLEGLRILLAEDTPVIQRVATIMLEKMGAVVVAVGDGQQAVDALNYMVSAEDCRRESLQKDKNTRSQTEILTCHQYDLILMDCQMPKMDGYEATKAIRKSEEGTGKHIPIVALTAHAMSCDEAKCLKVGMDAYLTKPIDFKLMVSTILSLTKPTT*