Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0050740 | sp|Q9MAJ7|BGAL5_ARATH | 73.003 | 726 | 193 | 3 | 6 | 729 | 8 | 732 | 0.0 | 1140 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0050740 | G7I5V0 | 97.984 | 744 | 15 | 0 | 1 | 744 | 1 | 744 | 0.0 | 1531 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003290 | Msa0050740 | 0.874311 | 7.456345e-68 | -8.615850e-47 |
| Msa0039790 | Msa0050740 | 0.815380 | 9.525620e-52 | -8.615850e-47 |
| Msa0050740 | Msa0050750 | 0.980941 | 2.145218e-151 | -8.615850e-47 |
| Msa0050740 | Msa0298500 | 0.801458 | 8.919331e-49 | -8.615850e-47 |
| Msa0050740 | Msa0301820 | 0.800030 | 1.745021e-48 | -8.615850e-47 |
| Msa0050740 | Msa0418010 | 0.818643 | 1.760959e-52 | -8.615850e-47 |
| Msa0050740 | Msa0621730 | 0.812536 | 4.035576e-51 | -8.615850e-47 |
| Msa0050740 | Msa0759650 | 0.851261 | 9.960635e-61 | -8.615850e-47 |
| Msa0050740 | Msa0801210 | 0.824674 | 7.104039e-54 | -8.615850e-47 |
| Msa0050740 | Msa0839560 | 0.805608 | 1.229741e-49 | -8.615850e-47 |
| Msa0050740 | Msa1173330 | 0.809303 | 2.022551e-50 | -8.615850e-47 |
| Msa0050740 | Msa1307570 | 0.819553 | 1.093577e-52 | -8.615850e-47 |
| Msa0050740 | Msa1440590 | 0.980131 | 1.624525e-149 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0050740 | MtrunA17_Chr1g0155701 | 97.984 | 744 | 15 | 0 | 1 | 744 | 1 | 744 | 0.0 | 1531 |
| Msa0050740 | MtrunA17_Chr3g0142001 | 79.673 | 733 | 142 | 4 | 1 | 730 | 1 | 729 | 0.0 | 1232 |
| Msa0050740 | MtrunA17_Chr8g0372421 | 72.702 | 729 | 197 | 2 | 1 | 728 | 1 | 728 | 0.0 | 1143 |
| Msa0050740 | MtrunA17_Chr5g0404841 | 72.367 | 731 | 197 | 3 | 1 | 730 | 1 | 727 | 0.0 | 1127 |
| Msa0050740 | MtrunA17_Chr8g0342001 | 65.154 | 749 | 244 | 9 | 8 | 745 | 4 | 746 | 0.0 | 1002 |
| Msa0050740 | MtrunA17_Chr2g0330291 | 65.152 | 726 | 242 | 7 | 28 | 745 | 27 | 749 | 0.0 | 975 |
| Msa0050740 | MtrunA17_Chr2g0299161 | 62.637 | 728 | 265 | 5 | 1 | 726 | 3 | 725 | 0.0 | 973 |
| Msa0050740 | MtrunA17_Chr1g0152571 | 63.262 | 705 | 254 | 5 | 25 | 726 | 27 | 729 | 0.0 | 955 |
| Msa0050740 | MtrunA17_Chr2g0326481 | 55.313 | 734 | 299 | 9 | 9 | 730 | 7 | 723 | 0.0 | 831 |
| Msa0050740 | MtrunA17_Chr4g0029301 | 55.435 | 736 | 300 | 11 | 9 | 730 | 8 | 729 | 0.0 | 810 |
| Msa0050740 | MtrunA17_Chr3g0130711 | 51.293 | 735 | 340 | 8 | 13 | 735 | 14 | 742 | 0.0 | 770 |
| Msa0050740 | MtrunA17_Chr8g0378221 | 50.750 | 733 | 317 | 10 | 28 | 723 | 49 | 774 | 0.0 | 734 |
| Msa0050740 | MtrunA17_Chr2g0301001 | 47.091 | 739 | 371 | 9 | 6 | 728 | 2 | 736 | 0.0 | 696 |
| Msa0050740 | MtrunA17_Chr3g0124931 | 50.214 | 701 | 308 | 11 | 27 | 723 | 24 | 687 | 0.0 | 680 |
| Msa0050740 | MtrunA17_Chr5g0406921 | 48.091 | 707 | 349 | 9 | 29 | 723 | 28 | 728 | 0.0 | 674 |
| Msa0050740 | MtrunA17_Chr5g0408371 | 47.486 | 716 | 351 | 12 | 29 | 730 | 28 | 732 | 0.0 | 668 |
| Msa0050740 | MtrunA17_Chr3g0130721 | 48.714 | 700 | 326 | 9 | 29 | 723 | 27 | 698 | 0.0 | 667 |
| Msa0050740 | MtrunA17_Chr3g0077531 | 46.143 | 726 | 369 | 11 | 3 | 715 | 2 | 718 | 0.0 | 658 |
| Msa0050740 | MtrunA17_Chr4g0037031 | 45.055 | 728 | 360 | 11 | 10 | 724 | 11 | 711 | 0.0 | 644 |
| Msa0050740 | MtrunA17_Chr3g0145581 | 45.597 | 704 | 346 | 12 | 28 | 724 | 34 | 707 | 0.0 | 641 |
| Msa0050740 | MtrunA17_Chr2g0326491 | 55.534 | 524 | 160 | 6 | 9 | 474 | 8 | 516 | 0.0 | 593 |
| Msa0050740 | MtrunA17_Chr2g0326441 | 67.483 | 286 | 88 | 1 | 9 | 294 | 7 | 287 | 8.56e-144 | 424 |
| Msa0050740 | MtrunA17_Chr2g0326451 | 44.028 | 427 | 201 | 7 | 325 | 730 | 25 | 434 | 1.54e-113 | 354 |
| Msa0050740 | MtrunA17_Chr4g0071281 | 50.725 | 207 | 99 | 3 | 513 | 718 | 39 | 243 | 3.51e-61 | 206 |
| Msa0050740 | MtrunA17_Chr2g0326521 | 43.379 | 219 | 92 | 5 | 515 | 728 | 4 | 195 | 5.09e-47 | 169 |
| Msa0050740 | MtrunA17_Chr4g0071291 | 60.938 | 128 | 18 | 1 | 24 | 151 | 17 | 112 | 7.69e-44 | 154 |
| Msa0050740 | MtrunA17_Chr8g0372581 | 53.846 | 143 | 47 | 2 | 147 | 289 | 6 | 129 | 2.34e-43 | 153 |
| Msa0050740 | MtrunA17_Chr5g0405781 | 35.231 | 281 | 97 | 7 | 80 | 359 | 10 | 206 | 1.40e-39 | 149 |
| Msa0050740 | MtrunA17_Chr2g0330191 | 33.148 | 359 | 186 | 11 | 39 | 361 | 64 | 404 | 1.87e-36 | 146 |
| Msa0050740 | MtrunA17_Chr2g0307981 | 29.968 | 317 | 185 | 10 | 405 | 715 | 6 | 291 | 4.02e-32 | 127 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0050740 | AT1G45130.1 | 73.003 | 726 | 193 | 3 | 6 | 729 | 8 | 732 | 0.0 | 1140 |
| Msa0050740 | AT4G36360.1 | 70.248 | 726 | 215 | 1 | 4 | 728 | 8 | 733 | 0.0 | 1117 |
| Msa0050740 | AT4G36360.2 | 70.248 | 726 | 215 | 1 | 4 | 728 | 8 | 733 | 0.0 | 1115 |
| Msa0050740 | AT1G45130.2 | 72.812 | 640 | 173 | 1 | 91 | 729 | 14 | 653 | 0.0 | 1008 |
| Msa0050740 | AT3G13750.1 | 65.068 | 730 | 242 | 7 | 5 | 730 | 16 | 736 | 0.0 | 990 |
| Msa0050740 | AT4G26140.1 | 62.968 | 721 | 257 | 7 | 9 | 726 | 12 | 725 | 0.0 | 964 |
| Msa0050740 | AT3G52840.2 | 63.188 | 709 | 254 | 5 | 22 | 726 | 73 | 778 | 0.0 | 958 |
| Msa0050740 | AT3G52840.1 | 63.188 | 709 | 254 | 5 | 22 | 726 | 19 | 724 | 0.0 | 957 |
| Msa0050740 | AT4G26140.7 | 60.992 | 746 | 256 | 8 | 9 | 726 | 12 | 750 | 0.0 | 951 |
| Msa0050740 | AT5G56870.1 | 61.073 | 727 | 278 | 5 | 1 | 726 | 1 | 723 | 0.0 | 929 |
| Msa0050740 | AT4G26140.9 | 60.168 | 713 | 249 | 8 | 9 | 693 | 12 | 717 | 0.0 | 898 |
| Msa0050740 | AT2G28470.1 | 57.163 | 712 | 285 | 8 | 28 | 726 | 31 | 735 | 0.0 | 838 |
| Msa0050740 | AT2G28470.3 | 57.163 | 712 | 285 | 8 | 28 | 726 | 31 | 735 | 0.0 | 838 |
| Msa0050740 | AT2G28470.2 | 57.163 | 712 | 285 | 8 | 28 | 726 | 25 | 729 | 0.0 | 837 |
| Msa0050740 | AT2G28470.4 | 57.163 | 712 | 285 | 8 | 28 | 726 | 25 | 729 | 0.0 | 837 |
| Msa0050740 | AT4G26140.3 | 62.621 | 618 | 224 | 5 | 9 | 626 | 12 | 622 | 0.0 | 823 |
| Msa0050740 | AT4G26140.2 | 62.621 | 618 | 224 | 5 | 9 | 626 | 12 | 622 | 0.0 | 823 |
| Msa0050740 | AT4G26140.6 | 62.480 | 621 | 224 | 6 | 9 | 627 | 12 | 625 | 0.0 | 821 |
| Msa0050740 | AT2G28470.5 | 57.080 | 678 | 271 | 8 | 27 | 691 | 30 | 700 | 0.0 | 789 |
| Msa0050740 | AT5G63810.1 | 49.729 | 738 | 358 | 6 | 1 | 728 | 4 | 738 | 0.0 | 769 |
| Msa0050740 | AT2G32810.2 | 50.267 | 748 | 335 | 10 | 6 | 723 | 15 | 755 | 0.0 | 758 |
| Msa0050740 | AT2G32810.1 | 50.267 | 748 | 335 | 10 | 6 | 723 | 15 | 755 | 0.0 | 758 |
| Msa0050740 | AT4G26140.8 | 64.855 | 552 | 186 | 5 | 9 | 558 | 12 | 557 | 0.0 | 750 |
| Msa0050740 | AT4G26140.4 | 62.218 | 577 | 185 | 6 | 9 | 558 | 12 | 582 | 0.0 | 737 |
| Msa0050740 | AT4G26140.5 | 62.218 | 577 | 185 | 6 | 9 | 558 | 12 | 582 | 0.0 | 737 |
| Msa0050740 | AT5G20710.1 | 48.514 | 740 | 366 | 9 | 1 | 730 | 1 | 735 | 0.0 | 713 |
| Msa0050740 | AT1G77410.1 | 48.271 | 723 | 328 | 16 | 9 | 723 | 8 | 692 | 0.0 | 660 |
| Msa0050740 | AT5G63800.1 | 47.476 | 733 | 333 | 14 | 6 | 723 | 7 | 702 | 0.0 | 658 |
| Msa0050740 | AT1G77410.3 | 47.940 | 728 | 328 | 17 | 9 | 723 | 8 | 697 | 0.0 | 655 |
| Msa0050740 | AT1G31740.1 | 45.934 | 701 | 323 | 9 | 29 | 718 | 22 | 677 | 0.0 | 645 |
| Msa0050740 | AT2G16730.1 | 45.768 | 697 | 336 | 10 | 28 | 713 | 43 | 708 | 0.0 | 626 |
| Msa0050740 | AT4G35010.1 | 45.022 | 693 | 347 | 10 | 28 | 713 | 40 | 705 | 0.0 | 610 |
| Msa0050740 | AT4G38590.1 | 44.078 | 667 | 336 | 12 | 59 | 716 | 1 | 639 | 0.0 | 556 |
| Msa0050740 | AT4G38590.2 | 43.368 | 671 | 339 | 13 | 55 | 716 | 65 | 703 | 1.62e-179 | 541 |
| Msa0050740 | AT1G77410.2 | 47.098 | 603 | 276 | 15 | 129 | 723 | 19 | 586 | 9.25e-176 | 521 |
| Msa0050740 | AT1G77410.4 | 47.098 | 603 | 276 | 15 | 129 | 723 | 19 | 586 | 9.25e-176 | 521 |
| Msa0050740 | AT5G20710.2 | 43.633 | 534 | 287 | 8 | 207 | 730 | 1 | 530 | 1.24e-153 | 461 |
| Msa0050740 | AT2G04060.1 | 32.880 | 368 | 171 | 8 | 294 | 660 | 23 | 315 | 1.05e-52 | 190 |
| Msa0050740 | AT1G72990.3 | 34.943 | 352 | 190 | 10 | 39 | 360 | 18 | 360 | 2.06e-44 | 170 |
| Msa0050740 | AT1G72990.1 | 34.943 | 352 | 190 | 10 | 39 | 360 | 73 | 415 | 3.74e-44 | 170 |
| Msa0050740 | AT1G72990.4 | 34.943 | 352 | 190 | 10 | 39 | 360 | 73 | 415 | 3.74e-44 | 170 |
| Msa0050740 | AT1G72990.2 | 33.724 | 341 | 187 | 10 | 50 | 360 | 22 | 353 | 8.35e-39 | 153 |
| Msa0050740 | AT2G04062.1 | 41.279 | 172 | 80 | 2 | 29 | 200 | 7 | 157 | 1.08e-34 | 130 |
Find 193 sgRNAs with CRISPR-Local
Find 315 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTACTTGTGAAAGAATTAT+TGG | 0.133829 | 1_2:+4745528 | None:intergenic |
| TTCTTCTCTATCTTCTTTCT+TGG | 0.154990 | 1_2:-4746427 | Msa0050740:CDS |
| AACTTTATTCTTCATAATTA+TGG | 0.177081 | 1_2:+4742225 | None:intergenic |
| TTTAGGCTTGTATGGTTTAT+TGG | 0.180144 | 1_2:+4744983 | None:intergenic |
| CTGACTTCCATGATTCAAAA+TGG | 0.224983 | 1_2:+4743135 | None:intergenic |
| TGAGTGTCAATGTATTTATT+TGG | 0.236454 | 1_2:-4742100 | Msa0050740:three_prime_UTR |
| AATTACAAATCAACCTTAAA+AGG | 0.254271 | 1_2:+4745718 | None:intergenic |
| CACAAACAGGTTGGCCTAAA+GGG | 0.278304 | 1_2:-4742927 | Msa0050740:intron |
| CAGGCATATGTATTCTCTTC+AGG | 0.280229 | 1_2:-4744254 | Msa0050740:CDS |
| TCCTTCAAATGACCATATTT+AGG | 0.289683 | 1_2:+4744431 | None:intergenic |
| TCAAGACCATGAAGCAAAAT+TGG | 0.291254 | 1_2:+4743101 | None:intergenic |
| GGAAGAGCACTTGGAGCTTC+TGG | 0.302471 | 1_2:-4745351 | Msa0050740:CDS |
| AATCACAGCTTCTAGACTTC+TGG | 0.310113 | 1_2:-4743889 | Msa0050740:CDS |
| CTGGTCATGCATACTCAAAC+TGG | 0.311005 | 1_2:-4745332 | Msa0050740:CDS |
| CAAGAGTAACCTTCAATAAT+AGG | 0.311719 | 1_2:-4744184 | Msa0050740:CDS |
| TTATTGATACTTATGTGTTT+TGG | 0.314153 | 1_2:-4746156 | Msa0050740:CDS |
| TTAGGCTTGTATGGTTTATT+GGG | 0.316421 | 1_2:+4744984 | None:intergenic |
| GTTGTATTAGTCATTAAATT+TGG | 0.316432 | 1_2:+4742297 | None:intergenic |
| CGAGATCCTGCACTGGTCGC+TGG | 0.327311 | 1_2:+4744789 | None:intergenic |
| GGCTAACTCACCACTGGATC+TGG | 0.328635 | 1_2:+4745243 | None:intergenic |
| GACAGAAGTTTCACATTTAA+CGG | 0.332873 | 1_2:-4743319 | Msa0050740:CDS |
| GATCCTACTGTTACATCATT+AGG | 0.334094 | 1_2:-4744362 | Msa0050740:CDS |
| TATACTTCAGGGGTGCTTCT+TGG | 0.336445 | 1_2:+4746310 | None:intergenic |
| TAGAATTGCTAGGCAACATT+TGG | 0.341066 | 1_2:+4743970 | None:intergenic |
| TTGTAGATTGAGAATGAGTA+TGG | 0.341574 | 1_2:-4745381 | Msa0050740:intron |
| GTTTGGTTGAAGTATGTTCC+TGG | 0.342045 | 1_2:-4745766 | Msa0050740:CDS |
| TACTCATGCAATTATTTAGT+TGG | 0.353458 | 1_2:-4741998 | Msa0050740:three_prime_UTR |
| GTCCATAGTTTAGGCTTGTA+TGG | 0.356806 | 1_2:+4744975 | None:intergenic |
| GGCATTGGACATGAGCAGTA+TGG | 0.356871 | 1_2:-4742682 | Msa0050740:CDS |
| CACTAACCATATTCATCAAT+TGG | 0.357740 | 1_2:+4744544 | None:intergenic |
| AAATTTGGTTTACTAGATCT+TGG | 0.359025 | 1_2:+4742312 | None:intergenic |
| CTTTATGTACATCTTAGAAT+TGG | 0.367311 | 1_2:-4745927 | Msa0050740:CDS |
| TTGTTAAGAGAACCTAAATA+TGG | 0.367945 | 1_2:-4744443 | Msa0050740:CDS |
| GACAAAGCATAGGAAGATAT+TGG | 0.368369 | 1_2:-4742635 | Msa0050740:CDS |
| CAAGCAATGTGAACATGCTT+TGG | 0.368637 | 1_2:-4744393 | Msa0050740:CDS |
| TAAGTATCCTCCCTGATTGT+AGG | 0.369275 | 1_2:-4744136 | Msa0050740:CDS |
| TGTGTAGAGGATTTCCTGTT+TGG | 0.373160 | 1_2:-4745783 | Msa0050740:intron |
| GATGCTCCAATTGATGAATA+TGG | 0.376118 | 1_2:-4744550 | Msa0050740:intron |
| AACCATACAAGCCTAAACTA+TGG | 0.381218 | 1_2:-4744977 | Msa0050740:CDS |
| ACTAATTTCGGACGATCGGC+TGG | 0.381654 | 1_2:-4744604 | Msa0050740:CDS |
| AATACATCTGTCCTACAATC+AGG | 0.390545 | 1_2:+4744125 | None:intergenic |
| AGCAAACTATCATTCGAATT+CGG | 0.392194 | 1_2:-4744210 | Msa0050740:CDS |
| AAGAATTAGGAGGGAATCCT+TGG | 0.392838 | 1_2:-4742368 | Msa0050740:CDS |
| ACAATCAGGGAGGATACTTA+TGG | 0.396888 | 1_2:+4744139 | None:intergenic |
| GATTAGGTACAGGTGTCCCT+TGG | 0.398070 | 1_2:-4745290 | Msa0050740:CDS |
| ATCAGTTTCAGAACAGATAA+TGG | 0.399070 | 1_2:-4745742 | Msa0050740:CDS |
| AGTTGCTCGTTTCATACAAA+AGG | 0.399519 | 1_2:-4744759 | Msa0050740:CDS |
| GAGATACTAGTGACTATCTA+TGG | 0.403562 | 1_2:-4743848 | Msa0050740:CDS |
| GCAATTCTAAGTTGTTATCA+TGG | 0.405026 | 1_2:-4743956 | Msa0050740:CDS |
| CATGCAATTATTTAGTTGGT+TGG | 0.405645 | 1_2:-4741994 | Msa0050740:three_prime_UTR |
| CTCCAAGTGCTCTTCCTTGT+GGG | 0.408569 | 1_2:+4745358 | None:intergenic |
| GTATGGGAAAGGGTCAAGTA+TGG | 0.409540 | 1_2:-4742665 | Msa0050740:CDS |
| GAGATCCTGCACTGGTCGCT+GGG | 0.413012 | 1_2:+4744790 | None:intergenic |
| ACTACCATCAAGTTGTTTGT+TGG | 0.414792 | 1_2:+4742396 | None:intergenic |
| TACCACGGAGGAACTAATTT+CGG | 0.421462 | 1_2:-4744616 | Msa0050740:CDS |
| GTCATAGTGCCTATTATTGA+AGG | 0.422552 | 1_2:+4744175 | None:intergenic |
| AAAACCAGCCACAGTTGAAA+TGG | 0.423005 | 1_2:-4742833 | Msa0050740:CDS |
| CAGAGATGAGGATTCTCCTT+TGG | 0.426691 | 1_2:+4746347 | None:intergenic |
| TATTGGATGGTTTATGCAAA+GGG | 0.430224 | 1_2:-4742618 | Msa0050740:CDS |
| GTTTGTGCTGAGTGGAACTT+TGG | 0.434468 | 1_2:-4745897 | Msa0050740:CDS |
| GAATCCTTGGAAAATATCTC+TGG | 0.443768 | 1_2:-4742355 | Msa0050740:CDS |
| ATGGAGTCTCATCTGTTGAT+TGG | 0.444222 | 1_2:-4742878 | Msa0050740:CDS |
| ATATATATCTGCATAATTGT+TGG | 0.444889 | 1_2:-4741956 | Msa0050740:three_prime_UTR |
| TGTGCCATTTCAACTGTGGC+TGG | 0.453005 | 1_2:+4742829 | None:intergenic |
| CTGTCAAATCCTTCTGTCCA+TGG | 0.453029 | 1_2:+4743078 | None:intergenic |
| GGCACTATGACTTGCCTCCT+TGG | 0.459047 | 1_2:-4744163 | Msa0050740:CDS |
| CATGACTCAGTCCATAGTTT+AGG | 0.461041 | 1_2:+4744966 | None:intergenic |
| ATTGCTTGATAGCTTTATGA+AGG | 0.461553 | 1_2:+4744408 | None:intergenic |
| CGAAGATACATCTTCATCAT+AGG | 0.461768 | 1_2:+4743929 | None:intergenic |
| GCACTTCTTAGTGTAGCTGT+TGG | 0.465181 | 1_2:-4743262 | Msa0050740:CDS |
| GGAACATACTTCAACCAAAC+AGG | 0.465558 | 1_2:+4745769 | None:intergenic |
| TTCCAGAATAATACATTGCC+AGG | 0.466558 | 1_2:+4746115 | None:intergenic |
| AGCATTAGTGTGCATTCCTC+TGG | 0.470893 | 1_2:-4743620 | Msa0050740:CDS |
| GCCAATGGTTCAACTCCATC+AGG | 0.472547 | 1_2:+4742702 | None:intergenic |
| AAAACCAACAAACAACTTGA+TGG | 0.473330 | 1_2:-4742400 | Msa0050740:CDS |
| ATTAGGTACAGGTGTCCCTT+GGG | 0.473811 | 1_2:-4745289 | Msa0050740:CDS |
| AGAAAAGCTATTATCATCAA+TGG | 0.476920 | 1_2:-4746370 | Msa0050740:CDS |
| GAATAGTAACAGAAGAAGCT+TGG | 0.477596 | 1_2:+4746447 | None:intergenic |
| GGAAAATATCTCTGGTAAAG+AGG | 0.478631 | 1_2:-4742347 | Msa0050740:CDS |
| AATGTTCATGAACCTTCTCC+TGG | 0.479007 | 1_2:-4746133 | Msa0050740:CDS |
| ATCATTAGGAGCATATGAAC+AGG | 0.480489 | 1_2:-4744348 | Msa0050740:intron |
| GAATTCTATATAGTTTCCAT+TGG | 0.484396 | 1_2:-4742183 | Msa0050740:three_prime_UTR |
| GCTCCAAGTGCTCTTCCTTG+TGG | 0.484823 | 1_2:+4745357 | None:intergenic |
| AAGAAGCTTGGAAACTGAGT+TGG | 0.489457 | 1_2:+4746459 | None:intergenic |
| CAAAGGAGAATCCTCATCTC+TGG | 0.492293 | 1_2:-4746346 | Msa0050740:CDS |
| GCTAACTCACCACTGGATCT+GGG | 0.494475 | 1_2:+4745244 | None:intergenic |
| GCGAAATGCCAAGTTGGTTG+TGG | 0.495089 | 1_2:-4742555 | Msa0050740:CDS |
| TGGAGTCTCATCTGTTGATT+GGG | 0.497847 | 1_2:-4742877 | Msa0050740:CDS |
| TTCATTCTTTAATTATTACA+TGG | 0.500991 | 1_2:-4744732 | Msa0050740:intron |
| CATGGACAGAAGGATTTGAC+AGG | 0.501539 | 1_2:-4743077 | Msa0050740:CDS |
| TTCCACTCAGCACAAACATA+AGG | 0.505669 | 1_2:+4745903 | None:intergenic |
| TGCAATTCTTGCAACTATGC+CGG | 0.505723 | 1_2:-4742591 | Msa0050740:CDS |
| ACACAAACAGGTTGGCCTAA+AGG | 0.509211 | 1_2:-4742928 | Msa0050740:intron |
| GTTCCAGCACGTAGGTCGAT+AGG | 0.511189 | 1_2:+4743295 | None:intergenic |
| CTGATTCAGAAAGCAAAAGA+TGG | 0.512055 | 1_2:-4746190 | Msa0050740:CDS |
| GCTGTCCATGTGTTTATCAA+TGG | 0.515626 | 1_2:-4743593 | Msa0050740:CDS |
| ACAAACAGGTTGGCCTAAAG+GGG | 0.515899 | 1_2:-4742926 | Msa0050740:intron |
| TTTGTGCTGAGTGGAACTTT+GGG | 0.518987 | 1_2:-4745896 | Msa0050740:intron |
| GGCCCTATCGACCTACGTGC+TGG | 0.519091 | 1_2:-4743298 | Msa0050740:CDS |
| TTTGGTTGAAGTATGTTCCT+GGG | 0.520726 | 1_2:-4745765 | Msa0050740:CDS |
| GGTACCATGTTCCAAGGTCC+TGG | 0.521759 | 1_2:-4742425 | Msa0050740:CDS |
| CAGAATCATTTCTTCGTGGA+AGG | 0.526155 | 1_2:-4743652 | Msa0050740:CDS |
| AAGGGTCAAGTATGGATCAA+TGG | 0.526204 | 1_2:-4742657 | Msa0050740:CDS |
| GGCCCACAAGGAAGAGCACT+TGG | 0.526726 | 1_2:-4745360 | Msa0050740:CDS |
| ATGAATTTGGTGTCTCCCAA+TGG | 0.527375 | 1_2:-4742897 | Msa0050740:CDS |
| TGTCCCTTGGGTGATGTGTA+AGG | 0.528527 | 1_2:-4745277 | Msa0050740:CDS |
| GGTGCTTCTTGGATAATGAA+TGG | 0.528944 | 1_2:+4746321 | None:intergenic |
| CTGTCCATGTGTTTATCAAT+GGG | 0.530690 | 1_2:-4743592 | Msa0050740:CDS |
| TCATAGCTTGTAGTTATGAA+TGG | 0.530733 | 1_2:+4744577 | None:intergenic |
| CTATGCCGGAACTTATCGTC+AGG | 0.531405 | 1_2:-4742577 | Msa0050740:CDS |
| CAATTCTAAGTTGTTATCAT+GGG | 0.532316 | 1_2:-4743955 | Msa0050740:CDS |
| TTTCGCCTGACGATAAGTTC+CGG | 0.532860 | 1_2:+4742572 | None:intergenic |
| ACCTAAATATGGTCATTTGA+AGG | 0.533113 | 1_2:-4744432 | Msa0050740:CDS |
| ATGGCTGTTGGATTAGGTAC+AGG | 0.534625 | 1_2:-4745300 | Msa0050740:CDS |
| TGGAGTTGAACCATTGGCAT+TGG | 0.539466 | 1_2:-4742697 | Msa0050740:CDS |
| CTACAGATAAATGCTTGCAA+TGG | 0.542639 | 1_2:-4745029 | Msa0050740:intron |
| GGACATGAGCAGTATGGGAA+AGG | 0.544160 | 1_2:-4742676 | Msa0050740:CDS |
| AGAATAAATTAATAAGAACT+TGG | 0.544222 | 1_2:+4742130 | None:intergenic |
| GCATTGGACATGAGCAGTAT+GGG | 0.544484 | 1_2:-4742681 | Msa0050740:CDS |
| TCATGGAAGTCAGGAATCAC+AGG | 0.550670 | 1_2:-4743125 | Msa0050740:CDS |
| GGCAACATTTGGATTTGTGA+AGG | 0.551117 | 1_2:+4743981 | None:intergenic |
| ATCAACAGATGAGACTCCAT+TGG | 0.551457 | 1_2:+4742881 | None:intergenic |
| GAGGAATGCACACTAATGCT+TGG | 0.552794 | 1_2:+4743623 | None:intergenic |
| GTTGCTCGTTTCATACAAAA+GGG | 0.552827 | 1_2:-4744758 | Msa0050740:CDS |
| AATAATACATTGCCAGGAGA+AGG | 0.553523 | 1_2:+4746121 | None:intergenic |
| GCACATTTCAATGCACCTGA+TGG | 0.556406 | 1_2:-4742717 | Msa0050740:CDS |
| CGTCAGGCGAAATGCCAAGT+TGG | 0.557079 | 1_2:-4742561 | Msa0050740:CDS |
| TCAACAGATGAGACTCCATT+GGG | 0.557160 | 1_2:+4742882 | None:intergenic |
| TGGTCTTGACCATGGACAGA+AGG | 0.557257 | 1_2:-4743087 | Msa0050740:CDS |
| ATATTGGATGGTTTATGCAA+AGG | 0.557748 | 1_2:-4742619 | Msa0050740:CDS |
| TAGGCTGTCCACAACCAACT+TGG | 0.558476 | 1_2:+4742547 | None:intergenic |
| GTTTGCTAGAAAAGCTGCAC+AGG | 0.559158 | 1_2:+4744226 | None:intergenic |
| TTCCAGCACGTAGGTCGATA+GGG | 0.563878 | 1_2:+4743296 | None:intergenic |
| TATCAATCATGCTATGCCAA+TGG | 0.564435 | 1_2:+4742167 | None:intergenic |
| AATTAGTACCATCTTTGAGT+AGG | 0.565328 | 1_2:+4742528 | None:intergenic |
| TCATCAGAATCATTTCTTCG+TGG | 0.567472 | 1_2:-4743656 | Msa0050740:CDS |
| GACATGAGCAGTATGGGAAA+GGG | 0.570823 | 1_2:-4742675 | Msa0050740:CDS |
| TTGCTTCATGGTCTTGACCA+TGG | 0.573358 | 1_2:-4743095 | Msa0050740:CDS |
| TTTGCAGGTACCATGTTCCA+AGG | 0.574539 | 1_2:-4742431 | Msa0050740:intron |
| GAAAGCAAAAGATGGAGGGT+TGG | 0.574643 | 1_2:-4746182 | Msa0050740:CDS |
| GATAACAACTTAGAATTGCT+AGG | 0.576031 | 1_2:+4743960 | None:intergenic |
| ATTATTAACAACATTGTCGT+AGG | 0.577085 | 1_2:-4746639 | Msa0050740:five_prime_UTR |
| GTTCTGTTATCTCTGTGAGT+GGG | 0.586337 | 1_2:+4746585 | None:intergenic |
| ACCTTGTGCCATTTCAACTG+TGG | 0.587399 | 1_2:+4742825 | None:intergenic |
| AGATCCTGCACTGGTCGCTG+GGG | 0.591214 | 1_2:+4744791 | None:intergenic |
| GATCCTGCACTGGTCGCTGG+GGG | 0.592080 | 1_2:+4744792 | None:intergenic |
| CTAAACTATGGACTGAGTCA+TGG | 0.593403 | 1_2:-4744965 | Msa0050740:CDS |
| CTGCTCATGTCCAATGCCAA+TGG | 0.594494 | 1_2:+4742687 | None:intergenic |
| TCTGTTCTGAAACTGATCCC+AGG | 0.600350 | 1_2:+4745748 | None:intergenic |
| TGTTCTGTTATCTCTGTGAG+TGG | 0.603781 | 1_2:+4746584 | None:intergenic |
| TGGATCAATGGACAAAGCAT+AGG | 0.604928 | 1_2:-4742645 | Msa0050740:CDS |
| ATACATCTGTCCTACAATCA+GGG | 0.605634 | 1_2:+4744126 | None:intergenic |
| TTAACCAGGACCTTGGAACA+TGG | 0.606779 | 1_2:+4742421 | None:intergenic |
| GCTCCTAATGATGTAACAGT+AGG | 0.606807 | 1_2:+4744359 | None:intergenic |
| ACCTGATGGAGTTGAACCAT+TGG | 0.609035 | 1_2:-4742703 | Msa0050740:CDS |
| AAGCATAGGAAGATATTGGA+TGG | 0.609264 | 1_2:-4742631 | Msa0050740:CDS |
| GAGAATGAGTATGGCCCACA+AGG | 0.610168 | 1_2:-4745372 | Msa0050740:CDS |
| GACCTTATGTTTGTGCTGAG+TGG | 0.610645 | 1_2:-4745905 | Msa0050740:CDS |
| ATTTCCCATTGATAAACACA+TGG | 0.611686 | 1_2:+4743588 | None:intergenic |
| AGGAACTAATTTCGGACGAT+CGG | 0.614751 | 1_2:-4744608 | Msa0050740:CDS |
| TTCAGAAAGCAAAAGATGGA+GGG | 0.615815 | 1_2:-4746186 | Msa0050740:CDS |
| GTGGACAGCCTACTCAAAGA+TGG | 0.615918 | 1_2:-4742536 | Msa0050740:intron |
| GCGAACGCGAGATCCTGCAC+TGG | 0.618153 | 1_2:+4744782 | None:intergenic |
| GGACTGAGTCATGGAGTGGT+TGG | 0.618267 | 1_2:-4744956 | Msa0050740:intron |
| ATTCAGAAAGCAAAAGATGG+AGG | 0.619685 | 1_2:-4746187 | Msa0050740:CDS |
| TGGTCATGCATACTCAAACT+GGG | 0.624854 | 1_2:-4745331 | Msa0050740:CDS |
| AATTTCGGACGATCGGCTGG+AGG | 0.627314 | 1_2:-4744601 | Msa0050740:CDS |
| TCTTCCTTACACATCACCCA+AGG | 0.629739 | 1_2:+4745273 | None:intergenic |
| AGATGATGCCCCAGATCCAG+TGG | 0.631725 | 1_2:-4745253 | Msa0050740:intron |
| CTAACTCACCACTGGATCTG+GGG | 0.639843 | 1_2:+4745245 | None:intergenic |
| GCTCGTTTCATACAAAAGGG+TGG | 0.641579 | 1_2:-4744755 | Msa0050740:CDS |
| ATTGACTTGGCATCAAACAA+AGG | 0.645701 | 1_2:-4742250 | Msa0050740:three_prime_UTR |
| ACTATCTATGGTATATAACC+AGG | 0.648277 | 1_2:-4743836 | Msa0050740:intron |
| AATGAATGGAACCAGAGATG+AGG | 0.654785 | 1_2:+4746335 | None:intergenic |
| CTATTATCATCAATGGCCAA+AGG | 0.665404 | 1_2:-4746363 | Msa0050740:CDS |
| GAAAAGCTGTTTCAGTCACA+AGG | 0.669396 | 1_2:-4745555 | Msa0050740:CDS |
| CTTCCTTACACATCACCCAA+GGG | 0.670888 | 1_2:+4745274 | None:intergenic |
| CAAACAGGTTGGCCTAAAGG+GGG | 0.672533 | 1_2:-4742925 | Msa0050740:intron |
| TAGTATAGTATATACTTCAG+GGG | 0.680900 | 1_2:+4746300 | None:intergenic |
| GGGAGGATACTTATGGACCA+AGG | 0.681332 | 1_2:+4744146 | None:intergenic |
| TGAAGATGTATCTTCGCTAG+CGG | 0.687691 | 1_2:-4743922 | Msa0050740:CDS |
| CACATGGACAGCATCACCAG+AGG | 0.689285 | 1_2:+4743604 | None:intergenic |
| GCCACAGTTGAAATGGCACA+AGG | 0.694536 | 1_2:-4742826 | Msa0050740:intron |
| GTCCGAAATTAGTTCCTCCG+TGG | 0.697646 | 1_2:+4744614 | None:intergenic |
| CATAGCATGATTGATACGAG+AGG | 0.704572 | 1_2:-4742160 | Msa0050740:three_prime_UTR |
| CTATGGACTGAGTCATGGAG+TGG | 0.709849 | 1_2:-4744960 | Msa0050740:CDS |
| AAGCTGTTTCAGTCACAAGG+TGG | 0.718827 | 1_2:-4745552 | Msa0050740:CDS |
| AATGACAAATGATAGTACCA+CGG | 0.725388 | 1_2:-4744631 | Msa0050740:intron |
| ATGGACAGAAGGATTTGACA+GGG | 0.731802 | 1_2:-4743076 | Msa0050740:CDS |
| GAAATGTGTGTAGATGTGGG+AGG | 0.739680 | 1_2:-4746215 | Msa0050740:intron |
| AGGATACTTATGGACCAAGG+AGG | 0.747272 | 1_2:+4744149 | None:intergenic |
| CATCTGTCCTACAATCAGGG+AGG | 0.749201 | 1_2:+4744129 | None:intergenic |
| GACAAATGATAGTACCACGG+AGG | 0.759475 | 1_2:-4744628 | Msa0050740:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTGAAAAAAAAAACTTTT+AGG | - | chr1_2:4742964-4742983 | Msa0050740:intron | 10.0% |
| !! | AACTTCAAACATTTATTATT+TGG | - | chr1_2:4742727-4742746 | Msa0050740:intron | 15.0% |
| !! | TTCATTCTTTAATTATTACA+TGG | - | chr1_2:4743857-4743876 | Msa0050740:CDS | 15.0% |
| !! | TATTAATGAATTGATTGTTA+TGG | - | chr1_2:4744563-4744582 | Msa0050740:CDS | 15.0% |
| !! | AACTTTATTCTTCATAATTA+TGG | + | chr1_2:4746367-4746386 | None:intergenic | 15.0% |
| !! | AGAATAAATTAATAAGAACT+TGG | + | chr1_2:4746462-4746481 | None:intergenic | 15.0% |
| !! | ATAGTATAGTATATACTTCA+GGG | + | chr1_2:4742293-4742312 | None:intergenic | 20.0% |
| !! | AATAGTATAGTATATACTTC+AGG | + | chr1_2:4742294-4742313 | None:intergenic | 20.0% |
| !!! | TTATTGATACTTATGTGTTT+TGG | - | chr1_2:4742433-4742452 | Msa0050740:intron | 20.0% |
| !! | AATTACAAATCAACCTTAAA+AGG | + | chr1_2:4742874-4742893 | None:intergenic | 20.0% |
| !! | TTATGTAGTTAATTCTTGAA+TGG | - | chr1_2:4742909-4742928 | Msa0050740:CDS | 20.0% |
| !! | ATTTAGATTAACAATGAGTT+TGG | + | chr1_2:4743490-4743509 | None:intergenic | 20.0% |
| !! | ACTCTATTATCTTAACTAAA+AGG | + | chr1_2:4743520-4743539 | None:intergenic | 20.0% |
| !! | ATTTATCTGTAGGAAAAAAT+TGG | + | chr1_2:4743552-4743571 | None:intergenic | 20.0% |
| !! | ACAACTAACTTCATAAATAA+TGG | + | chr1_2:4743672-4743691 | None:intergenic | 20.0% |
| !! | TTCTTTAATTATTACATGGT+TGG | - | chr1_2:4743861-4743880 | Msa0050740:CDS | 20.0% |
| !! | CTAAAGTAATGACTATATTT+AGG | + | chr1_2:4744092-4744111 | None:intergenic | 20.0% |
| !!! | TTGGTATTTTTAAATCTAGA+GGG | + | chr1_2:4744790-4744809 | None:intergenic | 20.0% |
| !! | ATTTAAAAATACCAAGCTAT+TGG | - | chr1_2:4744795-4744814 | Msa0050740:CDS | 20.0% |
| !! | ATAATTCGGTTAAAATTAGT+TGG | - | chr1_2:4745055-4745074 | Msa0050740:intron | 20.0% |
| !!! | TCTTTTTTTTCATAGAATAG+TGG | - | chr1_2:4745428-4745447 | Msa0050740:intron | 20.0% |
| !! | AATTATGTATATACACAAAC+AGG | - | chr1_2:4745649-4745668 | Msa0050740:intron | 20.0% |
| !! | GTTGTATTAGTCATTAAATT+TGG | + | chr1_2:4746295-4746314 | None:intergenic | 20.0% |
| !! | ATATATATCTGCATAATTGT+TGG | - | chr1_2:4746633-4746652 | Msa0050740:five_prime_UTR | 20.0% |
| ! | ATTATTAACAACATTGTCGT+AGG | - | chr1_2:4741950-4741969 | Msa0050740:three_prime_UTR | 25.0% |
| ! | AGAAAAGCTATTATCATCAA+TGG | - | chr1_2:4742219-4742238 | Msa0050740:three_prime_UTR | 25.0% |
| ! | TAGTATAGTATATACTTCAG+GGG | + | chr1_2:4742292-4742311 | None:intergenic | 25.0% |
| ! | CTTTATGTACATCTTAGAAT+TGG | - | chr1_2:4742662-4742681 | Msa0050740:CDS | 25.0% |
| !!! | GTTTTTTTATTTGTGTGTAG+AGG | - | chr1_2:4742793-4742812 | Msa0050740:intron | 25.0% |
| ! | CTTACTTGTGAAAGAATTAT+TGG | + | chr1_2:4743064-4743083 | None:intergenic | 25.0% |
| ! | TTGTTAAGAGAACCTAAATA+TGG | - | chr1_2:4744146-4744165 | Msa0050740:CDS | 25.0% |
| !!! | CAGTGTTTTAGAAGTTATTT+CGG | + | chr1_2:4744284-4744303 | None:intergenic | 25.0% |
| ! | CAATTCTAAGTTGTTATCAT+GGG | - | chr1_2:4744634-4744653 | Msa0050740:intron | 25.0% |
| !!! | CTTGGTATTTTTAAATCTAG+AGG | + | chr1_2:4744791-4744810 | None:intergenic | 25.0% |
| !! | AGTTGAAATCTTACTGTTTT+TGG | - | chr1_2:4744882-4744901 | Msa0050740:intron | 25.0% |
| !!! | GTTGAAATCTTACTGTTTTT+GGG | - | chr1_2:4744883-4744902 | Msa0050740:intron | 25.0% |
| !! | TTTATCAATGGGAAATTTTC+AGG | - | chr1_2:4745008-4745027 | Msa0050740:CDS | 25.0% |
| ! | TAAACCAAGATGAGATAATT+CGG | - | chr1_2:4745041-4745060 | Msa0050740:intron | 25.0% |
| ! | CATAAAATGTATCTTAGACT+CGG | - | chr1_2:4745160-4745179 | Msa0050740:intron | 25.0% |
| ! | AGAGATGATAAAATTCAAGT+TGG | + | chr1_2:4745381-4745400 | None:intergenic | 25.0% |
| ! | TGCTATATTACTATTGCATA+AGG | - | chr1_2:4745612-4745631 | Msa0050740:intron | 25.0% |
| !! | TAATCTAATTTGAAACCTTC+AGG | - | chr1_2:4745850-4745869 | Msa0050740:intron | 25.0% |
| ! | AACATTACTTCCTTATCTTT+AGG | - | chr1_2:4746105-4746124 | Msa0050740:intron | 25.0% |
| !! | ACTTATTACTTCAATTTTGC+AGG | - | chr1_2:4746143-4746162 | Msa0050740:CDS | 25.0% |
| !!! | ATGGTAGTTTTTGAAGAATT+AGG | - | chr1_2:4746208-4746227 | Msa0050740:intron | 25.0% |
| !!! | TAGTTTTTGAAGAATTAGGA+GGG | - | chr1_2:4746212-4746231 | Msa0050740:intron | 25.0% |
| !! | AAATTTGGTTTACTAGATCT+TGG | + | chr1_2:4746280-4746299 | None:intergenic | 25.0% |
| ! | GAATTCTATATAGTTTCCAT+TGG | - | chr1_2:4746406-4746425 | Msa0050740:CDS | 25.0% |
| ! | TGAGTGTCAATGTATTTATT+TGG | - | chr1_2:4746489-4746508 | Msa0050740:five_prime_UTR | 25.0% |
| ! | TACTCATGCAATTATTTAGT+TGG | - | chr1_2:4746591-4746610 | Msa0050740:five_prime_UTR | 25.0% |
| !!! | TAGCTTTTTTCTACAATGGA+GGG | + | chr1_2:4742104-4742123 | None:intergenic | 30.0% |
| !!! | ATAGCTTTTTTCTACAATGG+AGG | + | chr1_2:4742105-4742124 | None:intergenic | 30.0% |
| TCCATTGTAGAAAAAAGCTA+TGG | - | chr1_2:4742104-4742123 | Msa0050740:three_prime_UTR | 30.0% | |
| !!! | TCCATAGCTTTTTTCTACAA+TGG | + | chr1_2:4742108-4742127 | None:intergenic | 30.0% |
| TTCTTCTCTATCTTCTTTCT+TGG | - | chr1_2:4742162-4742181 | Msa0050740:three_prime_UTR | 30.0% | |
| ! | TTTGAAATGTGTGTAGATGT+GGG | - | chr1_2:4742371-4742390 | Msa0050740:CDS | 30.0% |
| !! | CAATGTATTATTCTGGAATC+TGG | - | chr1_2:4742479-4742498 | Msa0050740:intron | 30.0% |
| ATTAAGACAGTGCAGAAAAA+AGG | - | chr1_2:4742638-4742657 | Msa0050740:CDS | 30.0% | |
| ATCAGTTTCAGAACAGATAA+TGG | - | chr1_2:4742847-4742866 | Msa0050740:CDS | 30.0% | |
| !! | AACAGATAATGGTCCTTTTA+AGG | - | chr1_2:4742858-4742877 | Msa0050740:CDS | 30.0% |
| TTGTAGATTGAGAATGAGTA+TGG | - | chr1_2:4743208-4743227 | Msa0050740:intron | 30.0% | |
| TTCCAAATTTGCACTAAATC+AGG | + | chr1_2:4743386-4743405 | None:intergenic | 30.0% | |
| ! | TTAGTGCAAATTTGGAATGA+CGG | - | chr1_2:4743389-4743408 | Msa0050740:intron | 30.0% |
| ! | AACTTTTGCTAAAATCACAG+TGG | - | chr1_2:4743449-4743468 | Msa0050740:intron | 30.0% |
| TTAGGCTTGTATGGTTTATT+GGG | + | chr1_2:4743608-4743627 | None:intergenic | 30.0% | |
| TTTAGGCTTGTATGGTTTAT+TGG | + | chr1_2:4743609-4743628 | None:intergenic | 30.0% | |
| GAAGTTAGTTGTGAAAACAA+TGG | - | chr1_2:4743680-4743699 | Msa0050740:intron | 30.0% | |
| AATGACAAATGATAGTACCA+CGG | - | chr1_2:4743958-4743977 | Msa0050740:CDS | 30.0% | |
| ! | TCATAGCTTGTAGTTATGAA+TGG | + | chr1_2:4744015-4744034 | None:intergenic | 30.0% |
| CACTAACCATATTCATCAAT+TGG | + | chr1_2:4744048-4744067 | None:intergenic | 30.0% | |
| ACCTAAATATGGTCATTTGA+AGG | - | chr1_2:4744157-4744176 | Msa0050740:CDS | 30.0% | |
| TCCTTCAAATGACCATATTT+AGG | + | chr1_2:4744161-4744180 | None:intergenic | 30.0% | |
| !! | ATTGCTTGATAGCTTTATGA+AGG | + | chr1_2:4744184-4744203 | None:intergenic | 30.0% |
| !!! | TGTTTTAGAAGTTATTTCGG+AGG | + | chr1_2:4744281-4744300 | None:intergenic | 30.0% |
| TAACAATGATCTATGTTTCC+AGG | - | chr1_2:4744316-4744335 | Msa0050740:intron | 30.0% | |
| AGCAAACTATCATTCGAATT+CGG | - | chr1_2:4744379-4744398 | Msa0050740:CDS | 30.0% | |
| CAAGAGTAACCTTCAATAAT+AGG | - | chr1_2:4744405-4744424 | Msa0050740:CDS | 30.0% | |
| ACTGCAAGAGTAAGAATAAA+AGG | - | chr1_2:4744491-4744510 | Msa0050740:intron | 30.0% | |
| CTGCAAGAGTAAGAATAAAA+GGG | - | chr1_2:4744492-4744511 | Msa0050740:intron | 30.0% | |
| GATAACAACTTAGAATTGCT+AGG | + | chr1_2:4744632-4744651 | None:intergenic | 30.0% | |
| GCAATTCTAAGTTGTTATCA+TGG | - | chr1_2:4744633-4744652 | Msa0050740:intron | 30.0% | |
| ACTATCTATGGTATATAACC+AGG | - | chr1_2:4744753-4744772 | Msa0050740:CDS | 30.0% | |
| ATTTCCCATTGATAAACACA+TGG | + | chr1_2:4745004-4745023 | None:intergenic | 30.0% | |
| TTAACCGAATTATCTCATCT+TGG | + | chr1_2:4745048-4745067 | None:intergenic | 30.0% | |
| TTTAGGTAGTAGATAGAAGT+TGG | - | chr1_2:4745085-4745104 | Msa0050740:intron | 30.0% | |
| GACAGAAGTTTCACATTTAA+CGG | - | chr1_2:4745270-4745289 | Msa0050740:CDS | 30.0% | |
| GTAATAAGCAAGATACTAAC+AGG | + | chr1_2:4745357-4745376 | None:intergenic | 30.0% | |
| TCGTTAAATAGTTGCTATAG+CGG | - | chr1_2:4745589-4745608 | Msa0050740:CDS | 30.0% | |
| ATGTATATACACAAACAGGT+TGG | - | chr1_2:4745653-4745672 | Msa0050740:intron | 30.0% | |
| ATATTGGATGGTTTATGCAA+AGG | - | chr1_2:4745970-4745989 | Msa0050740:CDS | 30.0% | |
| TATTGGATGGTTTATGCAAA+GGG | - | chr1_2:4745971-4745990 | Msa0050740:CDS | 30.0% | |
| AATTAGTACCATCTTTGAGT+AGG | + | chr1_2:4746064-4746083 | None:intergenic | 30.0% | |
| ! | GTAGCATTTTCCTAAAGATA+AGG | + | chr1_2:4746118-4746137 | None:intergenic | 30.0% |
| AAAACCAACAAACAACTTGA+TGG | - | chr1_2:4746189-4746208 | Msa0050740:CDS | 30.0% | |
| !! | GTAGTTTTTGAAGAATTAGG+AGG | - | chr1_2:4746211-4746230 | Msa0050740:intron | 30.0% |
| ! | TTTACCAGAGATATTTTCCA+AGG | + | chr1_2:4746241-4746260 | None:intergenic | 30.0% |
| CACAAGTATGAGAACAAAAA+TGG | - | chr1_2:4746314-4746333 | Msa0050740:intron | 30.0% | |
| AACAAAAATGGTGATTGACT+TGG | - | chr1_2:4746326-4746345 | Msa0050740:CDS | 30.0% | |
| !!! | GTTTTTTATATATGCAGCTG+TGG | - | chr1_2:4746384-4746403 | Msa0050740:CDS | 30.0% |
| CATGCAATTATTTAGTTGGT+TGG | - | chr1_2:4746595-4746614 | Msa0050740:five_prime_UTR | 30.0% | |
| !! | TGGAGGGAAAGTTTTTGAAA+TGG | + | chr1_2:4742088-4742107 | None:intergenic | 35.0% |
| GAATAGTAACAGAAGAAGCT+TGG | + | chr1_2:4742145-4742164 | None:intergenic | 35.0% | |
| CTATTATCATCAATGGCCAA+AGG | - | chr1_2:4742226-4742245 | Msa0050740:three_prime_UTR | 35.0% | |
| ! | GTTTGAAATGTGTGTAGATG+TGG | - | chr1_2:4742370-4742389 | Msa0050740:CDS | 35.0% |
| CTGATTCAGAAAGCAAAAGA+TGG | - | chr1_2:4742399-4742418 | Msa0050740:CDS | 35.0% | |
| ATTCAGAAAGCAAAAGATGG+AGG | - | chr1_2:4742402-4742421 | Msa0050740:CDS | 35.0% | |
| TTCAGAAAGCAAAAGATGGA+GGG | - | chr1_2:4742403-4742422 | Msa0050740:CDS | 35.0% | |
| AATAATACATTGCCAGGAGA+AGG | + | chr1_2:4742471-4742490 | None:intergenic | 35.0% | |
| TTCCAGAATAATACATTGCC+AGG | + | chr1_2:4742477-4742496 | None:intergenic | 35.0% | |
| ! | GTGTTGCAGTACAATTTTGA+AGG | - | chr1_2:4742593-4742612 | Msa0050740:CDS | 35.0% |
| !! | TGCAGTACAATTTTGAAGGA+AGG | - | chr1_2:4742597-4742616 | Msa0050740:CDS | 35.0% |
| TTTGGTTGAAGTATGTTCCT+GGG | - | chr1_2:4742824-4742843 | Msa0050740:intron | 35.0% | |
| TGTGAAAGATCAAGAAAGAG+TGG | - | chr1_2:4743137-4743156 | Msa0050740:CDS | 35.0% | |
| TGCCTGATTTAGTGCAAATT+TGG | - | chr1_2:4743381-4743400 | Msa0050740:intron | 35.0% | |
| CATTGCAAGCATTTATCTGT+AGG | + | chr1_2:4743562-4743581 | None:intergenic | 35.0% | |
| CTACAGATAAATGCTTGCAA+TGG | - | chr1_2:4743560-4743579 | Msa0050740:intron | 35.0% | |
| AACCATACAAGCCTAAACTA+TGG | - | chr1_2:4743612-4743631 | Msa0050740:CDS | 35.0% | |
| AGGAGAAAAGAAGAGCAAAA+GGG | + | chr1_2:4743728-4743747 | None:intergenic | 35.0% | |
| AAGGAGAAAAGAAGAGCAAA+AGG | + | chr1_2:4743729-4743748 | None:intergenic | 35.0% | |
| TGAAAACCTGATGACCAAAT+GGG | + | chr1_2:4743760-4743779 | None:intergenic | 35.0% | |
| ! | GTCATCAGGTTTTCAGAATT+TGG | - | chr1_2:4743765-4743784 | Msa0050740:intron | 35.0% |
| ! | ATCAGGTTTTCAGAATTTGG+TGG | - | chr1_2:4743768-4743787 | Msa0050740:intron | 35.0% |
| AGTTGCTCGTTTCATACAAA+AGG | - | chr1_2:4743830-4743849 | Msa0050740:intron | 35.0% | |
| GTTGCTCGTTTCATACAAAA+GGG | - | chr1_2:4743831-4743850 | Msa0050740:intron | 35.0% | |
| ! | TTATTACATGGTTGGTTACC+TGG | - | chr1_2:4743869-4743888 | Msa0050740:CDS | 35.0% |
| !!! | GTTACCTGGTTCTTTTTTCT+CGG | - | chr1_2:4743883-4743902 | Msa0050740:CDS | 35.0% |
| TTAACCGAGAAAAAAGAACC+AGG | + | chr1_2:4743890-4743909 | None:intergenic | 35.0% | |
| GATGCTCCAATTGATGAATA+TGG | - | chr1_2:4744039-4744058 | Msa0050740:intron | 35.0% | |
| GATCCTACTGTTACATCATT+AGG | - | chr1_2:4744227-4744246 | Msa0050740:CDS | 35.0% | |
| ! | ATCATTAGGAGCATATGAAC+AGG | - | chr1_2:4744241-4744260 | Msa0050740:CDS | 35.0% |
| GTCATAGTGCCTATTATTGA+AGG | + | chr1_2:4744417-4744436 | None:intergenic | 35.0% | |
| ATACATCTGTCCTACAATCA+GGG | + | chr1_2:4744466-4744485 | None:intergenic | 35.0% | |
| AATACATCTGTCCTACAATC+AGG | + | chr1_2:4744467-4744486 | None:intergenic | 35.0% | |
| TAGAATTGCTAGGCAACATT+TGG | + | chr1_2:4744622-4744641 | None:intergenic | 35.0% | |
| CGAAGATACATCTTCATCAT+AGG | + | chr1_2:4744663-4744682 | None:intergenic | 35.0% | |
| GAGATACTAGTGACTATCTA+TGG | - | chr1_2:4744741-4744760 | Msa0050740:CDS | 35.0% | |
| AAAGCAAGGAAAAAGCTAGA+CGG | + | chr1_2:4744849-4744868 | None:intergenic | 35.0% | |
| TCATCAGAATCATTTCTTCG+TGG | - | chr1_2:4744933-4744952 | Msa0050740:intron | 35.0% | |
| CTGTCCATGTGTTTATCAAT+GGG | - | chr1_2:4744997-4745016 | Msa0050740:CDS | 35.0% | |
| !!! | AATTAGTTGGCGTTGGTTTT+AGG | - | chr1_2:4745068-4745087 | Msa0050740:intron | 35.0% |
| ! | AGATTCCTATTTCCTTTTGC+AGG | - | chr1_2:4745225-4745244 | Msa0050740:intron | 35.0% |
| ! | TTTTATTAGTTCCAGCACGT+AGG | + | chr1_2:4745305-4745324 | None:intergenic | 35.0% |
| ! | GTGGAATCCATTTTGAATCA+TGG | - | chr1_2:4745447-4745466 | Msa0050740:intron | 35.0% |
| CTGACTTCCATGATTCAAAA+TGG | + | chr1_2:4745457-4745476 | None:intergenic | 35.0% | |
| ! | CATTTTGAATCATGGAAGTC+AGG | - | chr1_2:4745455-4745474 | Msa0050740:intron | 35.0% |
| TCAAGACCATGAAGCAAAAT+TGG | + | chr1_2:4745491-4745510 | None:intergenic | 35.0% | |
| CACAAGGTAAGAAAAGTTAC+TGG | - | chr1_2:4745779-4745798 | Msa0050740:CDS | 35.0% | |
| GACAAAGCATAGGAAGATAT+TGG | - | chr1_2:4745954-4745973 | Msa0050740:CDS | 35.0% | |
| AAGCATAGGAAGATATTGGA+TGG | - | chr1_2:4745958-4745977 | Msa0050740:CDS | 35.0% | |
| !!! | GTTGTTTGTTGGTTTTAACC+AGG | + | chr1_2:4746185-4746204 | None:intergenic | 35.0% |
| ! | ACTACCATCAAGTTGTTTGT+TGG | + | chr1_2:4746196-4746215 | None:intergenic | 35.0% |
| GAATCCTTGGAAAATATCTC+TGG | - | chr1_2:4746234-4746253 | Msa0050740:intron | 35.0% | |
| GGAAAATATCTCTGGTAAAG+AGG | - | chr1_2:4746242-4746261 | Msa0050740:intron | 35.0% | |
| !! | ATTGACTTGGCATCAAACAA+AGG | - | chr1_2:4746339-4746358 | Msa0050740:CDS | 35.0% |
| TATCAATCATGCTATGCCAA+TGG | + | chr1_2:4746425-4746444 | None:intergenic | 35.0% | |
| GTTCTGTTATCTCTGTGAGT+GGG | + | chr1_2:4742007-4742026 | None:intergenic | 40.0% | |
| TGTTCTGTTATCTCTGTGAG+TGG | + | chr1_2:4742008-4742027 | None:intergenic | 40.0% | |
| AAGAAGCTTGGAAACTGAGT+TGG | + | chr1_2:4742133-4742152 | None:intergenic | 40.0% | |
| AATGAATGGAACCAGAGATG+AGG | + | chr1_2:4742257-4742276 | None:intergenic | 40.0% | |
| GGTGCTTCTTGGATAATGAA+TGG | + | chr1_2:4742271-4742290 | None:intergenic | 40.0% | |
| AATGTTCATGAACCTTCTCC+TGG | - | chr1_2:4742456-4742475 | Msa0050740:intron | 40.0% | |
| CTCCTGGCAATGTATTATTC+TGG | - | chr1_2:4742472-4742491 | Msa0050740:intron | 40.0% | |
| TTCCACTCAGCACAAACATA+AGG | + | chr1_2:4742689-4742708 | None:intergenic | 40.0% | |
| TTTGTGCTGAGTGGAACTTT+GGG | - | chr1_2:4742693-4742712 | Msa0050740:CDS | 40.0% | |
| TGTGTAGAGGATTTCCTGTT+TGG | - | chr1_2:4742806-4742825 | Msa0050740:intron | 40.0% | |
| GGAACATACTTCAACCAAAC+AGG | + | chr1_2:4742823-4742842 | None:intergenic | 40.0% | |
| GTTTGGTTGAAGTATGTTCC+TGG | - | chr1_2:4742823-4742842 | Msa0050740:intron | 40.0% | |
| ! | AACTTTTAGGCTGCAATGCA+AGG | - | chr1_2:4742977-4742996 | Msa0050740:intron | 40.0% |
| ! | GAAAAGCTGTTTCAGTCACA+AGG | - | chr1_2:4743034-4743053 | Msa0050740:intron | 40.0% |
| CTTGATCTTTCACAACATGC+AGG | + | chr1_2:4743131-4743150 | None:intergenic | 40.0% | |
| TGGTCATGCATACTCAAACT+GGG | - | chr1_2:4743258-4743277 | Msa0050740:CDS | 40.0% | |
| GCAAAAATGGCTGTTGGATT+AGG | - | chr1_2:4743283-4743302 | Msa0050740:CDS | 40.0% | |
| CAATGAGTTTGGCTGAATCA+CGG | + | chr1_2:4743479-4743498 | None:intergenic | 40.0% | |
| GTCCATAGTTTAGGCTTGTA+TGG | + | chr1_2:4743617-4743636 | None:intergenic | 40.0% | |
| CATGACTCAGTCCATAGTTT+AGG | + | chr1_2:4743626-4743645 | None:intergenic | 40.0% | |
| ! | CTAAACTATGGACTGAGTCA+TGG | - | chr1_2:4743624-4743643 | Msa0050740:CDS | 40.0% |
| ! | CTCCTTTTCCTATTCCCATT+TGG | - | chr1_2:4743743-4743762 | Msa0050740:intron | 40.0% |
| GACCAAATGGGAATAGGAAA+AGG | + | chr1_2:4743748-4743767 | None:intergenic | 40.0% | |
| CTGAAAACCTGATGACCAAA+TGG | + | chr1_2:4743761-4743780 | None:intergenic | 40.0% | |
| TACCACGGAGGAACTAATTT+CGG | - | chr1_2:4743973-4743992 | Msa0050740:CDS | 40.0% | |
| AGGAACTAATTTCGGACGAT+CGG | - | chr1_2:4743981-4744000 | Msa0050740:CDS | 40.0% | |
| ! | TCGAGTGCTTAACTGATTTC+AGG | - | chr1_2:4744122-4744141 | Msa0050740:CDS | 40.0% |
| CAAGCAATGTGAACATGCTT+TGG | - | chr1_2:4744196-4744215 | Msa0050740:CDS | 40.0% | |
| GCTCCTAATGATGTAACAGT+AGG | + | chr1_2:4744233-4744252 | None:intergenic | 40.0% | |
| !! | CTTCTAAAACACTGCGTTCA+TGG | - | chr1_2:4744290-4744309 | Msa0050740:intron | 40.0% |
| CTGAAGAGAATACATATGCC+TGG | + | chr1_2:4744337-4744356 | None:intergenic | 40.0% | |
| CAGGCATATGTATTCTCTTC+AGG | - | chr1_2:4744335-4744354 | Msa0050740:intron | 40.0% | |
| ACAATCAGGGAGGATACTTA+TGG | + | chr1_2:4744453-4744472 | None:intergenic | 40.0% | |
| TAAGTATCCTCCCTGATTGT+AGG | - | chr1_2:4744453-4744472 | Msa0050740:intron | 40.0% | |
| GTTATGGTTTCGTGAAGATG+AGG | - | chr1_2:4744579-4744598 | Msa0050740:CDS | 40.0% | |
| GGCAACATTTGGATTTGTGA+AGG | + | chr1_2:4744611-4744630 | None:intergenic | 40.0% | |
| TGAAGATGTATCTTCGCTAG+CGG | - | chr1_2:4744667-4744686 | Msa0050740:intron | 40.0% | |
| AATCACAGCTTCTAGACTTC+TGG | - | chr1_2:4744700-4744719 | Msa0050740:intron | 40.0% | |
| ACTAGAGAAAGCCAATAGCT+TGG | + | chr1_2:4744809-4744828 | None:intergenic | 40.0% | |
| TGCATAGAACTGAGAAAGCA+AGG | + | chr1_2:4744863-4744882 | None:intergenic | 40.0% | |
| CAGAATCATTTCTTCGTGGA+AGG | - | chr1_2:4744937-4744956 | Msa0050740:intron | 40.0% | |
| GCTGTCCATGTGTTTATCAA+TGG | - | chr1_2:4744996-4745015 | Msa0050740:CDS | 40.0% | |
| CGGTTAAAATTAGTTGGCGT+TGG | - | chr1_2:4745061-4745080 | Msa0050740:intron | 40.0% | |
| ! | ACAGGTCCAATTTTGCTTCA+TGG | - | chr1_2:4745482-4745501 | Msa0050740:intron | 40.0% |
| ATGGACAGAAGGATTTGACA+GGG | - | chr1_2:4745513-4745532 | Msa0050740:intron | 40.0% | |
| AGGATTTGACAGGGCAAAAA+TGG | - | chr1_2:4745522-4745541 | Msa0050740:intron | 40.0% | |
| !! | ATGAATTTGGTGTCTCCCAA+TGG | - | chr1_2:4745692-4745711 | Msa0050740:intron | 40.0% |
| TCAACAGATGAGACTCCATT+GGG | + | chr1_2:4745710-4745729 | None:intergenic | 40.0% | |
| ATCAACAGATGAGACTCCAT+TGG | + | chr1_2:4745711-4745730 | None:intergenic | 40.0% | |
| ATGGAGTCTCATCTGTTGAT+TGG | - | chr1_2:4745711-4745730 | Msa0050740:intron | 40.0% | |
| ! | TGGAGTCTCATCTGTTGATT+GGG | - | chr1_2:4745712-4745731 | Msa0050740:intron | 40.0% |
| AAAACCAGCCACAGTTGAAA+TGG | - | chr1_2:4745756-4745775 | Msa0050740:CDS | 40.0% | |
| AAGGGTCAAGTATGGATCAA+TGG | - | chr1_2:4745932-4745951 | Msa0050740:CDS | 40.0% | |
| TGGATCAATGGACAAAGCAT+AGG | - | chr1_2:4745944-4745963 | Msa0050740:CDS | 40.0% | |
| TGCAATTCTTGCAACTATGC+CGG | - | chr1_2:4745998-4746017 | Msa0050740:intron | 40.0% | |
| AAGAATTAGGAGGGAATCCT+TGG | - | chr1_2:4746221-4746240 | Msa0050740:intron | 40.0% | |
| CATAGCATGATTGATACGAG+AGG | - | chr1_2:4746429-4746448 | Msa0050740:CDS | 40.0% | |
| CAGAGATGAGGATTCTCCTT+TGG | + | chr1_2:4742245-4742264 | None:intergenic | 45.0% | |
| CAAAGGAGAATCCTCATCTC+TGG | - | chr1_2:4742243-4742262 | Msa0050740:three_prime_UTR | 45.0% | |
| !! | TATACTTCAGGGGTGCTTCT+TGG | + | chr1_2:4742282-4742301 | None:intergenic | 45.0% |
| GAAATGTGTGTAGATGTGGG+AGG | - | chr1_2:4742374-4742393 | Msa0050740:CDS | 45.0% | |
| GAAAGCAAAAGATGGAGGGT+TGG | - | chr1_2:4742407-4742426 | Msa0050740:CDS | 45.0% | |
| GACCTTATGTTTGTGCTGAG+TGG | - | chr1_2:4742684-4742703 | Msa0050740:CDS | 45.0% | |
| GTTTGTGCTGAGTGGAACTT+TGG | - | chr1_2:4742692-4742711 | Msa0050740:CDS | 45.0% | |
| !! | TCTGTTCTGAAACTGATCCC+AGG | + | chr1_2:4742844-4742863 | None:intergenic | 45.0% |
| ! | AAGCTGTTTCAGTCACAAGG+TGG | - | chr1_2:4743037-4743056 | Msa0050740:intron | 45.0% |
| CTGGTCATGCATACTCAAAC+TGG | - | chr1_2:4743257-4743276 | Msa0050740:CDS | 45.0% | |
| CTCAAACTGGGCTGCAAAAA+TGG | - | chr1_2:4743270-4743289 | Msa0050740:CDS | 45.0% | |
| ! | ATGGCTGTTGGATTAGGTAC+AGG | - | chr1_2:4743289-4743308 | Msa0050740:CDS | 45.0% |
| ATTAGGTACAGGTGTCCCTT+GGG | - | chr1_2:4743300-4743319 | Msa0050740:CDS | 45.0% | |
| CTTCCTTACACATCACCCAA+GGG | + | chr1_2:4743318-4743337 | None:intergenic | 45.0% | |
| TCTTCCTTACACATCACCCA+AGG | + | chr1_2:4743319-4743338 | None:intergenic | 45.0% | |
| AATCAGGCAAGATCACGAGA+AGG | + | chr1_2:4743370-4743389 | None:intergenic | 45.0% | |
| CCTGATGACCAAATGGGAAT+AGG | + | chr1_2:4743754-4743773 | None:intergenic | 45.0% | |
| CCTATTCCCATTTGGTCATC+AGG | - | chr1_2:4743751-4743770 | Msa0050740:intron | 45.0% | |
| GCTCGTTTCATACAAAAGGG+TGG | - | chr1_2:4743834-4743853 | Msa0050740:intron | 45.0% | |
| GACAAATGATAGTACCACGG+AGG | - | chr1_2:4743961-4743980 | Msa0050740:CDS | 45.0% | |
| ! | GTTTGCTAGAAAAGCTGCAC+AGG | + | chr1_2:4744366-4744385 | None:intergenic | 45.0% |
| AGGATACTTATGGACCAAGG+AGG | + | chr1_2:4744443-4744462 | None:intergenic | 45.0% | |
| TAGAGGGTAATCTACTGACC+TGG | + | chr1_2:4744774-4744793 | None:intergenic | 45.0% | |
| GAGGAATGCACACTAATGCT+TGG | + | chr1_2:4744969-4744988 | None:intergenic | 45.0% | |
| AGCATTAGTGTGCATTCCTC+TGG | - | chr1_2:4744969-4744988 | Msa0050740:CDS | 45.0% | |
| ! | CCTATTTCCTTTTGCAGGCT+CGG | - | chr1_2:4745230-4745249 | Msa0050740:intron | 45.0% |
| GCACTTCTTAGTGTAGCTGT+TGG | - | chr1_2:4745327-4745346 | Msa0050740:CDS | 45.0% | |
| TCATGGAAGTCAGGAATCAC+AGG | - | chr1_2:4745464-4745483 | Msa0050740:intron | 45.0% | |
| ! | TTGCTTCATGGTCTTGACCA+TGG | - | chr1_2:4745494-4745513 | Msa0050740:intron | 45.0% |
| CTGTCAAATCCTTCTGTCCA+TGG | + | chr1_2:4745514-4745533 | None:intergenic | 45.0% | |
| CATGGACAGAAGGATTTGAC+AGG | - | chr1_2:4745512-4745531 | Msa0050740:intron | 45.0% | |
| AGGGCAAAAATGGTCATACC+AGG | - | chr1_2:4745532-4745551 | Msa0050740:intron | 45.0% | |
| ACGACGCTGATACAGAAGTT+AGG | + | chr1_2:4745573-4745592 | None:intergenic | 45.0% | |
| !! | ACACAAACAGGTTGGCCTAA+AGG | - | chr1_2:4745661-4745680 | Msa0050740:intron | 45.0% |
| !! | CACAAACAGGTTGGCCTAAA+GGG | - | chr1_2:4745662-4745681 | Msa0050740:intron | 45.0% |
| !! | ACAAACAGGTTGGCCTAAAG+GGG | - | chr1_2:4745663-4745682 | Msa0050740:intron | 45.0% |
| AATTCATAGCCTCCCCCTTT+AGG | + | chr1_2:4745679-4745698 | None:intergenic | 45.0% | |
| AAAGGGGGAGGCTATGAATT+TGG | - | chr1_2:4745679-4745698 | Msa0050740:intron | 45.0% | |
| !! | ACCTTGTGCCATTTCAACTG+TGG | + | chr1_2:4745767-4745786 | None:intergenic | 45.0% |
| GTGCATTGAAATGTGCCTGA+AGG | + | chr1_2:4745868-4745887 | None:intergenic | 45.0% | |
| GCACATTTCAATGCACCTGA+TGG | - | chr1_2:4745872-4745891 | Msa0050740:intron | 45.0% | |
| ACCTGATGGAGTTGAACCAT+TGG | - | chr1_2:4745886-4745905 | Msa0050740:intron | 45.0% | |
| TGGAGTTGAACCATTGGCAT+TGG | - | chr1_2:4745892-4745911 | Msa0050740:intron | 45.0% | |
| GCATTGGACATGAGCAGTAT+GGG | - | chr1_2:4745908-4745927 | Msa0050740:CDS | 45.0% | |
| GACATGAGCAGTATGGGAAA+GGG | - | chr1_2:4745914-4745933 | Msa0050740:CDS | 45.0% | |
| GTATGGGAAAGGGTCAAGTA+TGG | - | chr1_2:4745924-4745943 | Msa0050740:CDS | 45.0% | |
| TTTCGCCTGACGATAAGTTC+CGG | + | chr1_2:4746020-4746039 | None:intergenic | 45.0% | |
| TTTGCAGGTACCATGTTCCA+AGG | - | chr1_2:4746158-4746177 | Msa0050740:CDS | 45.0% | |
| TTAACCAGGACCTTGGAACA+TGG | + | chr1_2:4746171-4746190 | None:intergenic | 45.0% | |
| !!! | GTTGGTTTTAACCAGGACCT+TGG | + | chr1_2:4746178-4746197 | None:intergenic | 45.0% |
| GAGAATGAGTATGGCCCACA+AGG | - | chr1_2:4743217-4743236 | Msa0050740:intron | 50.0% | |
| CTCCAAGTGCTCTTCCTTGT+GGG | + | chr1_2:4743234-4743253 | None:intergenic | 50.0% | |
| TGGGCTGCAAAAATGGCTGT+TGG | - | chr1_2:4743277-4743296 | Msa0050740:CDS | 50.0% | |
| GATTAGGTACAGGTGTCCCT+TGG | - | chr1_2:4743299-4743318 | Msa0050740:CDS | 50.0% | |
| TGTCCCTTGGGTGATGTGTA+AGG | - | chr1_2:4743312-4743331 | Msa0050740:CDS | 50.0% | |
| CTAACTCACCACTGGATCTG+GGG | + | chr1_2:4743347-4743366 | None:intergenic | 50.0% | |
| GCTAACTCACCACTGGATCT+GGG | + | chr1_2:4743348-4743367 | None:intergenic | 50.0% | |
| ! | CTATGGACTGAGTCATGGAG+TGG | - | chr1_2:4743629-4743648 | Msa0050740:CDS | 50.0% |
| GTCCGAAATTAGTTCCTCCG+TGG | + | chr1_2:4743978-4743997 | None:intergenic | 50.0% | |
| ACTAATTTCGGACGATCGGC+TGG | - | chr1_2:4743985-4744004 | Msa0050740:CDS | 50.0% | |
| GGGAGGATACTTATGGACCA+AGG | + | chr1_2:4744446-4744465 | None:intergenic | 50.0% | |
| CATCTGTCCTACAATCAGGG+AGG | + | chr1_2:4744463-4744482 | None:intergenic | 50.0% | |
| CCGAGCCTGCAAAAGGAAAT+AGG | + | chr1_2:4745233-4745252 | None:intergenic | 50.0% | |
| ! | CTTTTGCAGGCTCGGCTTTT+GGG | - | chr1_2:4745238-4745257 | Msa0050740:intron | 50.0% |
| TTCCAGCACGTAGGTCGATA+GGG | + | chr1_2:4745296-4745315 | None:intergenic | 50.0% | |
| ! | TGGTCTTGACCATGGACAGA+AGG | - | chr1_2:4745502-4745521 | Msa0050740:intron | 50.0% |
| AGGTTTGCGTGCATCATACC+TGG | + | chr1_2:4745553-4745572 | None:intergenic | 50.0% | |
| !! | CAAACAGGTTGGCCTAAAGG+GGG | - | chr1_2:4745664-4745683 | Msa0050740:intron | 50.0% |
| !! | TGTGCCATTTCAACTGTGGC+TGG | + | chr1_2:4745763-4745782 | None:intergenic | 50.0% |
| GCCACAGTTGAAATGGCACA+AGG | - | chr1_2:4745763-4745782 | Msa0050740:CDS | 50.0% | |
| GCCAATGGTTCAACTCCATC+AGG | + | chr1_2:4745890-4745909 | None:intergenic | 50.0% | |
| CTGCTCATGTCCAATGCCAA+TGG | + | chr1_2:4745905-4745924 | None:intergenic | 50.0% | |
| ! | GGCATTGGACATGAGCAGTA+TGG | - | chr1_2:4745907-4745926 | Msa0050740:CDS | 50.0% |
| GGACATGAGCAGTATGGGAA+AGG | - | chr1_2:4745913-4745932 | Msa0050740:CDS | 50.0% | |
| CTATGCCGGAACTTATCGTC+AGG | - | chr1_2:4746012-4746031 | Msa0050740:intron | 50.0% | |
| !! | GCGAAATGCCAAGTTGGTTG+TGG | - | chr1_2:4746034-4746053 | Msa0050740:intron | 50.0% |
| TAGGCTGTCCACAACCAACT+TGG | + | chr1_2:4746045-4746064 | None:intergenic | 50.0% | |
| GTGGACAGCCTACTCAAAGA+TGG | - | chr1_2:4746053-4746072 | Msa0050740:intron | 50.0% | |
| GCTCCAAGTGCTCTTCCTTG+TGG | + | chr1_2:4743235-4743254 | None:intergenic | 55.0% | |
| !! | GGAAGAGCACTTGGAGCTTC+TGG | - | chr1_2:4743238-4743257 | Msa0050740:intron | 55.0% |
| AGATGATGCCCCAGATCCAG+TGG | - | chr1_2:4743336-4743355 | Msa0050740:CDS | 55.0% | |
| GGCTAACTCACCACTGGATC+TGG | + | chr1_2:4743349-4743368 | None:intergenic | 55.0% | |
| CGAGAAGGCTAACTCACCAC+TGG | + | chr1_2:4743355-4743374 | None:intergenic | 55.0% | |
| GGACTGAGTCATGGAGTGGT+TGG | - | chr1_2:4743633-4743652 | Msa0050740:CDS | 55.0% | |
| AATTTCGGACGATCGGCTGG+AGG | - | chr1_2:4743988-4744007 | Msa0050740:CDS | 55.0% | |
| ! | GGCACTATGACTTGCCTCCT+TGG | - | chr1_2:4744426-4744445 | Msa0050740:CDS | 55.0% |
| CACATGGACAGCATCACCAG+AGG | + | chr1_2:4744988-4745007 | None:intergenic | 55.0% | |
| CCAAAAGCCGAGCCTGCAAA+AGG | + | chr1_2:4745240-4745259 | None:intergenic | 55.0% | |
| ! | CCTTTTGCAGGCTCGGCTTT+TGG | - | chr1_2:4745237-4745256 | Msa0050740:intron | 55.0% |
| !!! | AGGCTCGGCTTTTGGGACAA+GGG | - | chr1_2:4745245-4745264 | Msa0050740:intron | 55.0% |
| GTTCCAGCACGTAGGTCGAT+AGG | + | chr1_2:4745297-4745316 | None:intergenic | 55.0% | |
| CGTCAGGCGAAATGCCAAGT+TGG | - | chr1_2:4746028-4746047 | Msa0050740:intron | 55.0% | |
| GGTACCATGTTCCAAGGTCC+TGG | - | chr1_2:4746164-4746183 | Msa0050740:CDS | 55.0% | |
| !! | GGCCCACAAGGAAGAGCACT+TGG | - | chr1_2:4743229-4743248 | Msa0050740:intron | 60.0% |
| ! | AGATCCTGCACTGGTCGCTG+GGG | + | chr1_2:4743801-4743820 | None:intergenic | 60.0% |
| ! | GAGATCCTGCACTGGTCGCT+GGG | + | chr1_2:4743802-4743821 | None:intergenic | 60.0% |
| !!! | CAGGCTCGGCTTTTGGGACA+AGG | - | chr1_2:4745244-4745263 | Msa0050740:intron | 60.0% |
| !! | ACAGGTTGGCCTAAAGGGGG+AGG | - | chr1_2:4745667-4745686 | Msa0050740:intron | 60.0% |
| ! | GATCCTGCACTGGTCGCTGG+GGG | + | chr1_2:4743800-4743819 | None:intergenic | 65.0% |
| ! | CGAGATCCTGCACTGGTCGC+TGG | + | chr1_2:4743803-4743822 | None:intergenic | 65.0% |
| GCGAACGCGAGATCCTGCAC+TGG | + | chr1_2:4743810-4743829 | None:intergenic | 65.0% | |
| GGCCCTATCGACCTACGTGC+TGG | - | chr1_2:4745291-4745310 | Msa0050740:CDS | 65.0% | |
| GAACCCCCAGCGACCAGTGC+AGG | - | chr1_2:4743794-4743813 | Msa0050740:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 4741950 | 4746661 | 4741950 | ID=Msa0050740;Name=Msa0050740 |
| chr1_2 | mRNA | 4741950 | 4746661 | 4741950 | ID=Msa0050740-mRNA-1;Parent=Msa0050740;Name=Msa0050740-mRNA-1;_AED=0.06;_eAED=0.06;_QI=173|1|1|1|0.94|0.94|18|337|745 |
| chr1_2 | exon | 4741950 | 4742446 | 4741950 | ID=Msa0050740-mRNA-1:exon:1308;Parent=Msa0050740-mRNA-1 |
| chr1_2 | exon | 4742537 | 4742739 | 4742537 | ID=Msa0050740-mRNA-1:exon:1307;Parent=Msa0050740-mRNA-1 |
| chr1_2 | exon | 4742827 | 4742940 | 4742827 | ID=Msa0050740-mRNA-1:exon:1306;Parent=Msa0050740-mRNA-1 |
| chr1_2 | exon | 4743058 | 4743168 | 4743058 | ID=Msa0050740-mRNA-1:exon:1305;Parent=Msa0050740-mRNA-1 |
| chr1_2 | exon | 4743255 | 4743364 | 4743255 | ID=Msa0050740-mRNA-1:exon:1304;Parent=Msa0050740-mRNA-1 |
| chr1_2 | exon | 4743582 | 4743691 | 4743582 | ID=Msa0050740-mRNA-1:exon:1303;Parent=Msa0050740-mRNA-1 |
| chr1_2 | exon | 4743837 | 4744015 | 4743837 | ID=Msa0050740-mRNA-1:exon:1302;Parent=Msa0050740-mRNA-1 |
| chr1_2 | exon | 4744112 | 4744273 | 4744112 | ID=Msa0050740-mRNA-1:exon:1301;Parent=Msa0050740-mRNA-1 |
| chr1_2 | exon | 4744349 | 4744467 | 4744349 | ID=Msa0050740-mRNA-1:exon:1300;Parent=Msa0050740-mRNA-1 |
| chr1_2 | exon | 4744551 | 4744638 | 4744551 | ID=Msa0050740-mRNA-1:exon:1299;Parent=Msa0050740-mRNA-1 |
| chr1_2 | exon | 4744733 | 4744838 | 4744733 | ID=Msa0050740-mRNA-1:exon:1298;Parent=Msa0050740-mRNA-1 |
| chr1_2 | exon | 4744957 | 4745045 | 4744957 | ID=Msa0050740-mRNA-1:exon:1297;Parent=Msa0050740-mRNA-1 |
| chr1_2 | exon | 4745254 | 4745397 | 4745254 | ID=Msa0050740-mRNA-1:exon:1296;Parent=Msa0050740-mRNA-1 |
| chr1_2 | exon | 4745533 | 4745625 | 4745533 | ID=Msa0050740-mRNA-1:exon:1295;Parent=Msa0050740-mRNA-1 |
| chr1_2 | exon | 4745732 | 4745798 | 4745732 | ID=Msa0050740-mRNA-1:exon:1294;Parent=Msa0050740-mRNA-1 |
| chr1_2 | exon | 4745897 | 4746009 | 4745897 | ID=Msa0050740-mRNA-1:exon:1293;Parent=Msa0050740-mRNA-1 |
| chr1_2 | exon | 4746129 | 4746224 | 4746129 | ID=Msa0050740-mRNA-1:exon:1292;Parent=Msa0050740-mRNA-1 |
| chr1_2 | exon | 4746315 | 4746661 | 4746315 | ID=Msa0050740-mRNA-1:exon:1291;Parent=Msa0050740-mRNA-1 |
| chr1_2 | five_prime_UTR | 4746489 | 4746661 | 4746489 | ID=Msa0050740-mRNA-1:five_prime_utr;Parent=Msa0050740-mRNA-1 |
| chr1_2 | CDS | 4746315 | 4746488 | 4746315 | ID=Msa0050740-mRNA-1:cds;Parent=Msa0050740-mRNA-1 |
| chr1_2 | CDS | 4746129 | 4746224 | 4746129 | ID=Msa0050740-mRNA-1:cds;Parent=Msa0050740-mRNA-1 |
| chr1_2 | CDS | 4745897 | 4746009 | 4745897 | ID=Msa0050740-mRNA-1:cds;Parent=Msa0050740-mRNA-1 |
| chr1_2 | CDS | 4745732 | 4745798 | 4745732 | ID=Msa0050740-mRNA-1:cds;Parent=Msa0050740-mRNA-1 |
| chr1_2 | CDS | 4745533 | 4745625 | 4745533 | ID=Msa0050740-mRNA-1:cds;Parent=Msa0050740-mRNA-1 |
| chr1_2 | CDS | 4745254 | 4745397 | 4745254 | ID=Msa0050740-mRNA-1:cds;Parent=Msa0050740-mRNA-1 |
| chr1_2 | CDS | 4744957 | 4745045 | 4744957 | ID=Msa0050740-mRNA-1:cds;Parent=Msa0050740-mRNA-1 |
| chr1_2 | CDS | 4744733 | 4744838 | 4744733 | ID=Msa0050740-mRNA-1:cds;Parent=Msa0050740-mRNA-1 |
| chr1_2 | CDS | 4744551 | 4744638 | 4744551 | ID=Msa0050740-mRNA-1:cds;Parent=Msa0050740-mRNA-1 |
| chr1_2 | CDS | 4744349 | 4744467 | 4744349 | ID=Msa0050740-mRNA-1:cds;Parent=Msa0050740-mRNA-1 |
| chr1_2 | CDS | 4744112 | 4744273 | 4744112 | ID=Msa0050740-mRNA-1:cds;Parent=Msa0050740-mRNA-1 |
| chr1_2 | CDS | 4743837 | 4744015 | 4743837 | ID=Msa0050740-mRNA-1:cds;Parent=Msa0050740-mRNA-1 |
| chr1_2 | CDS | 4743582 | 4743691 | 4743582 | ID=Msa0050740-mRNA-1:cds;Parent=Msa0050740-mRNA-1 |
| chr1_2 | CDS | 4743255 | 4743364 | 4743255 | ID=Msa0050740-mRNA-1:cds;Parent=Msa0050740-mRNA-1 |
| chr1_2 | CDS | 4743058 | 4743168 | 4743058 | ID=Msa0050740-mRNA-1:cds;Parent=Msa0050740-mRNA-1 |
| chr1_2 | CDS | 4742827 | 4742940 | 4742827 | ID=Msa0050740-mRNA-1:cds;Parent=Msa0050740-mRNA-1 |
| chr1_2 | CDS | 4742537 | 4742739 | 4742537 | ID=Msa0050740-mRNA-1:cds;Parent=Msa0050740-mRNA-1 |
| chr1_2 | CDS | 4742287 | 4742446 | 4742287 | ID=Msa0050740-mRNA-1:cds;Parent=Msa0050740-mRNA-1 |
| chr1_2 | three_prime_UTR | 4741950 | 4742286 | 4741950 | ID=Msa0050740-mRNA-1:three_prime_utr;Parent=Msa0050740-mRNA-1 |
| Gene Sequence |
| Protein sequence |
