AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0621730

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0621730 MtrunA17_Chr2g0322251 91.384 383 17 4 26 396 25 403 0.0 646
Msa0621730 MtrunA17_Chr4g0025311 72.396 384 87 5 27 392 39 421 3.69e-172 490
Msa0621730 MtrunA17_Chr7g0267811 68.462 390 100 8 27 396 29 415 6.30e-160 459
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0621730 AT2G35860.1 69.415 376 96 5 29 388 33 405 1.41e-164 471
Msa0621730 AT5G06390.1 63.902 410 118 6 6 388 10 416 6.12e-163 467
Msa0621730 AT3G11700.1 65.122 410 111 8 7 385 8 416 2.51e-161 463
Msa0621730 AT3G52370.2 63.915 424 124 8 15 416 67 483 5.54e-161 463
Msa0621730 AT3G52370.1 63.915 424 124 8 15 416 14 430 7.19e-161 461
Msa0621730 AT5G05650.1 54.217 83 32 1 309 385 5 87 4.81e-24 97.1

Find 166 sgRNAs with CRISPR-Local

Find 265 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAGATAATGGCCAGCTATTA+TGG 0.169252 4_2:+73976589 Msa0621730:three_prime_UTR
GCTGATGGGTCGGTTAAATT+TGG 0.208882 4_2:+73974831 Msa0621730:CDS
TAGCTTAATTTCCTTCATTA+TGG 0.231538 4_2:+73976470 Msa0621730:three_prime_UTR
TCAGCTTCTGGTGCTCCTTC+TGG 0.263112 4_2:-73974321 None:intergenic
GACTTTGAGGTTGAAGTATA+AGG 0.267978 4_2:+73974794 Msa0621730:CDS
CGTGGGAAAGGAGGAGGGTT+TGG 0.294645 4_2:-73974056 None:intergenic
GTTTGATCCGGATATTTATA+CGG 0.296213 4_2:+73974878 Msa0621730:CDS
CGTTCGAGGGCTACGTTGTT+TGG 0.297594 4_2:-73973976 None:intergenic
TGGTTGGGTAGGATTGTGTT+AGG 0.315940 4_2:+73976783 Msa0621730:three_prime_UTR
GGATGGGAGGATTTCTGTTC+AGG 0.319410 4_2:+73974899 Msa0621730:CDS
TTTGATACTCAGGGATAATA+TGG 0.322083 4_2:-73974719 None:intergenic
GGGTTGACCCGGAATGAATT+CGG 0.339469 4_2:-73974089 None:intergenic
GAGTATAGTTAATTACAATT+AGG 0.343289 4_2:-73976441 None:intergenic
TTCGCCATTGCTTCGTCATT+CGG 0.343305 4_2:-73974642 None:intergenic
ATTTCTGTTCAGGGGATTGA+TGG 0.345463 4_2:+73974909 Msa0621730:CDS
AGGATTGTGTTAGGATTTCA+TGG 0.351799 4_2:+73976792 Msa0621730:three_prime_UTR
CCGGCACCGGCGCCGGGACC+AGG 0.351903 4_2:+73974450 Msa0621730:CDS
TTCCAACCCGAATTCATTCC+GGG 0.355360 4_2:+73974082 Msa0621730:CDS
GAAGATCTCGCTGGAGATAA+TGG 0.357369 4_2:+73976576 Msa0621730:three_prime_UTR
GGAGCTAAAGCTTCGTAAAT+CGG 0.370512 4_2:-73974411 None:intergenic
GTGAGTCGAGTAGTGCTATT+AGG 0.374489 4_2:-73973861 None:intergenic
TCTCCGTCGCTAACGACGTT+AGG 0.380724 4_2:-73974575 None:intergenic
TTGGAGGGAAAGAATGTTAC+CGG 0.383221 4_2:-73974037 None:intergenic
CAGAAAATCACTTATTGAAT+CGG 0.386856 4_2:-73976862 None:intergenic
CTCTCTTCCGTTTGATACTC+AGG 0.391445 4_2:-73974729 None:intergenic
TGTGCTAGCAGGCATGTAAA+TGG 0.392327 4_2:-73976493 None:intergenic
CCTGGTCCCGGCGCCGGTGC+CGG 0.396680 4_2:-73974450 None:intergenic
GGTTGACCCGGAATGAATTC+GGG 0.397998 4_2:-73974088 None:intergenic
ATCAAGACATTACTGCATTA+CGG 0.398489 4_2:+73974519 Msa0621730:CDS
TCGGGTCGGGTAATGTCATT+CGG 0.401453 4_2:-73974201 None:intergenic
TCGGGTGGGTTACTTTCTCT+TGG 0.410510 4_2:-73974182 None:intergenic
GCAAGCTATCACTTTGTTTG+TGG 0.411281 4_2:+73976377 Msa0621730:three_prime_UTR
GGGAAAGGAGGAGGGTTTGG+AGG 0.413453 4_2:-73974053 None:intergenic
GGAGATGAGTCGTTTAGTTT+CGG 0.417291 4_2:+73974593 Msa0621730:CDS
GGTTACTTTCTCTTGGTTAA+CGG 0.417543 4_2:-73974175 None:intergenic
ATGTATAACACCGTCGGGTC+GGG 0.419202 4_2:-73974214 None:intergenic
GTCGGGTTATTTGTTTGATC+CGG 0.419309 4_2:+73974866 Msa0621730:CDS
TTTGGAGATGGTGATGGGTC+GGG 0.422793 4_2:+73974849 Msa0621730:CDS
CAGTGGTGACATCTGTTTCA+AGG 0.424828 4_2:-73974143 None:intergenic
TTTCTGTTCAGGGGATTGAT+GGG 0.425860 4_2:+73974910 Msa0621730:CDS
GAAGTATAAGGTTGTGGCTC+AGG 0.427357 4_2:+73974806 Msa0621730:CDS
GAATGACGTGGGAAAGGAGG+AGG 0.437806 4_2:-73974062 None:intergenic
GGTCGGAGATGGATTTGAAA+AGG 0.440788 4_2:-73974110 None:intergenic
GTTTCTTGCAGGGAAACTAC+TGG 0.441861 4_2:+73976229 Msa0621730:intron
ATTCCAACCCGAATTCATTC+CGG 0.442125 4_2:+73974081 Msa0621730:CDS
ACTAGCTCCGGCACCGGCGC+CGG 0.447734 4_2:+73974443 Msa0621730:CDS
AGATAATGGCCAGCTATTAT+GGG 0.450219 4_2:+73976590 Msa0621730:three_prime_UTR
CTCCCATCCGTATAAATATC+CGG 0.451181 4_2:-73974885 None:intergenic
CTAGCTCCGGCACCGGCGCC+GGG 0.452261 4_2:+73974444 Msa0621730:CDS
TGAAGATGTGCCGGTGGAGC+GGG 0.452605 4_2:+73974956 Msa0621730:CDS
CGGGTCGGGTAATGTCATTC+GGG 0.454693 4_2:-73974200 None:intergenic
AAGTGATGGTGTGGTCCTCC+TGG 0.454718 4_2:-73974468 None:intergenic
GATGCAGATTCACGGATTGA+TGG 0.458907 4_2:+73976522 Msa0621730:three_prime_UTR
AGGTTAGTTATGAGACTTTG+AGG 0.459291 4_2:+73974781 Msa0621730:intron
GAAACAGCATGCTGGATGCT+TGG 0.462414 4_2:+73976251 Msa0621730:CDS
GACGGAGGAGTTAAGTGAAC+CGG 0.462493 4_2:+73974671 Msa0621730:CDS
CTTTCATTATTTCCTTCATG+TGG 0.463243 4_2:+73976652 Msa0621730:three_prime_UTR
TGAAGATGAAGAAGAAAGAA+TGG 0.466374 4_2:-73973806 None:intergenic
CATGCTTTGATGCAGATTCA+CGG 0.471288 4_2:+73976514 Msa0621730:three_prime_UTR
ACATCTTCATTCTCCTTCAC+AGG 0.473698 4_2:-73974942 None:intergenic
GTTTCTCCAATGTCATGGTT+GGG 0.475428 4_2:+73976768 Msa0621730:three_prime_UTR
ATTTGGAGATGGTGATGGGT+CGG 0.483121 4_2:+73974848 Msa0621730:CDS
GGTCCTCCTGGTCCCGGCGC+CGG 0.483483 4_2:-73974456 None:intergenic
GTTAAATTTGGAGATGGTGA+TGG 0.487142 4_2:+73974843 Msa0621730:CDS
GGAATCTCCGGTGGTGAACC+TGG 0.487901 4_2:-73974390 None:intergenic
GTCGGAGATGGATTTGAAAA+GGG 0.488003 4_2:-73974109 None:intergenic
TTACGGTGGTTACAACGAAA+TGG 0.489351 4_2:+73974536 Msa0621730:CDS
TGTTTCTCCAATGTCATGGT+TGG 0.496530 4_2:+73976767 Msa0621730:three_prime_UTR
TTGTTGTAATACAACATGCC+TGG 0.498795 4_2:+73976918 Msa0621730:three_prime_UTR
GCATCAAAGCATGTGCTAGC+AGG 0.498922 4_2:-73976504 None:intergenic
CTCCAATGTCATGGTTGGGT+AGG 0.503101 4_2:+73976772 Msa0621730:three_prime_UTR
AAATCATCCACGACGGCGCG+TGG 0.503906 4_2:-73974258 None:intergenic
TGGTGTGGTCCTCCTGGTCC+CGG 0.504688 4_2:-73974462 None:intergenic
CTGTTTCAAGGTGGAGGTGA+TGG 0.507322 4_2:-73974131 None:intergenic
CATGTAAATGGCCATAATGA+AGG 0.508714 4_2:-73976481 None:intergenic
CTGGGTCAAGGTTACGTTCG+AGG 0.510106 4_2:-73973990 None:intergenic
ATCCGGATATTTATACGGAT+GGG 0.511243 4_2:+73974883 Msa0621730:CDS
CATGTATAACACCGTCGGGT+CGG 0.513231 4_2:-73974215 None:intergenic
TTTGCTCACTCGTCTATGAC+TGG 0.514203 4_2:-73976679 None:intergenic
TTAAATTTGGAGATGGTGAT+GGG 0.514625 4_2:+73974844 Msa0621730:CDS
ATGAAGATGTGCCGGTGGAG+CGG 0.516961 4_2:+73974955 Msa0621730:CDS
ATTATCTCCTCCGGTGAACC+CGG 0.518780 4_2:-73974690 None:intergenic
TGGTAATACATTATCTCCTC+CGG 0.519375 4_2:-73974699 None:intergenic
TTCTGTTCAGGGGATTGATG+GGG 0.520089 4_2:+73974911 Msa0621730:CDS
GATCCGGATATTTATACGGA+TGG 0.520456 4_2:+73974882 Msa0621730:CDS
GATGAGTCGTTTAGTTTCGG+AGG 0.520707 4_2:+73974596 Msa0621730:CDS
GTTAAGTGAACCGGGTTCAC+CGG 0.522544 4_2:+73974680 Msa0621730:CDS
GAGGTTGAAGTATAAGGTTG+TGG 0.525041 4_2:+73974800 Msa0621730:CDS
GTGGAGGTGATGGTCGGAGA+TGG 0.529825 4_2:-73974121 None:intergenic
GCTTCGTAAATCGGAATCTC+CGG 0.530135 4_2:-73974402 None:intergenic
AATGACGTGGGAAAGGAGGA+GGG 0.534298 4_2:-73974061 None:intergenic
GATTTACGAAGCTTTAGCTC+CGG 0.534959 4_2:+73974413 Msa0621730:CDS
AAATAAATAATTGCCTAGCC+AGG 0.537622 4_2:-73976936 None:intergenic
AAAATCACACCCATAATAGC+TGG 0.538570 4_2:-73976599 None:intergenic
ATGGGTTTAACCCGCTCCAC+CGG 0.539798 4_2:-73974966 None:intergenic
CGACCCGACGGTGTTATACA+TGG 0.539847 4_2:+73974216 Msa0621730:CDS
TCCGGGACCATCACTAGCTC+CGG 0.541984 4_2:+73974431 Msa0621730:CDS
ATCCTACCCAACCATGACAT+TGG 0.543910 4_2:-73976774 None:intergenic
ATTTACGAAGCTTTAGCTCC+GGG 0.544102 4_2:+73974414 Msa0621730:CDS
AACTACTGGAAACAGCATGC+TGG 0.545401 4_2:+73976243 Msa0621730:CDS
ACCATCACTAGCTCCGGCAC+CGG 0.548054 4_2:+73974437 Msa0621730:CDS
GCCGGTGCCGGAGCTAGTGA+TGG 0.548941 4_2:-73974438 None:intergenic
GGGTTGGAATGACGTGGGAA+AGG 0.550372 4_2:-73974068 None:intergenic
GTAATACAACATGCCTGGCT+AGG 0.550965 4_2:+73976923 Msa0621730:three_prime_UTR
GTCGGGTAATGTCATTCGGG+TGG 0.551322 4_2:-73974197 None:intergenic
GAATCTAGAATGGTTACTAA+AGG 0.552638 4_2:-73976276 None:intergenic
GGAAAGGAGGAGGGTTTGGA+GGG 0.556929 4_2:-73974052 None:intergenic
GACAAGAGGTGAATCTAGAA+TGG 0.557132 4_2:-73976286 None:intergenic
GGATTTGAAAAGGGTTGACC+CGG 0.557331 4_2:-73974100 None:intergenic
AGAATGTTTCTCCAATGTCA+TGG 0.557995 4_2:+73976763 Msa0621730:three_prime_UTR
CAACGGAGAGTTACAAGTGA+AGG 0.561843 4_2:+73974491 Msa0621730:CDS
GGGAAAGAATGTTACCGGGT+TGG 0.564238 4_2:-73974032 None:intergenic
GTAACTCTCCGTTGAAGTGA+TGG 0.564664 4_2:-73974482 None:intergenic
GAAGAAGAATGCAAGAGATG+TGG 0.565434 4_2:-73973765 None:intergenic
TTGGAATGACGTGGGAAAGG+AGG 0.565506 4_2:-73974065 None:intergenic
TTTGAGTTTATCTGACTCGT+TGG 0.567799 4_2:-73973832 None:intergenic
TATTATCCCTGAGTATCAAA+CGG 0.570877 4_2:+73974722 Msa0621730:CDS
GATGGGAGGATTTCTGTTCA+GGG 0.576222 4_2:+73974900 Msa0621730:CDS
GACCCGGAATGAATTCGGGT+TGG 0.576584 4_2:-73974084 None:intergenic
GCAAGAGATGTGGTGAGCCA+TGG 0.577847 4_2:-73973755 None:intergenic
TCTCTTCCGTTTGATACTCA+GGG 0.578898 4_2:-73974728 None:intergenic
ATGACTGGAAATCCACATGA+AGG 0.581767 4_2:-73976664 None:intergenic
ATACCATGTATAACACCGTC+GGG 0.582505 4_2:-73974219 None:intergenic
GCCGGAGCTAGTGATGGTCC+CGG 0.586394 4_2:-73974432 None:intergenic
TCTTATCCCACGCGCCGTCG+TGG 0.586904 4_2:+73974251 Msa0621730:CDS
TGGGTCAAGGTTACGTTCGA+GGG 0.587090 4_2:-73973989 None:intergenic
GGCTCAGGAAGCTGATGGGT+CGG 0.592530 4_2:+73974821 Msa0621730:CDS
TGACATCTGTTTCAAGGTGG+AGG 0.593301 4_2:-73974137 None:intergenic
ATCGAATATGAAGATCTCGC+TGG 0.595531 4_2:+73976567 Msa0621730:three_prime_UTR
CTTGAAACAGATGTCACCAC+TGG 0.595972 4_2:+73974144 Msa0621730:CDS
GTTGTGGCTCAGGAAGCTGA+TGG 0.599967 4_2:+73974816 Msa0621730:CDS
AAACCTAACGTCGTTAGCGA+CGG 0.600354 4_2:+73974572 Msa0621730:CDS
TCGGGTAATGTCATTCGGGT+GGG 0.602955 4_2:-73974196 None:intergenic
CGGATATTTATACGGATGGG+AGG 0.612456 4_2:+73974886 Msa0621730:CDS
GGCGCCGAATGACGAAGCAA+TGG 0.612493 4_2:+73974638 Msa0621730:CDS
ATCACCGCTGTTAAACCAGA+AGG 0.612532 4_2:+73974306 Msa0621730:CDS
GGGTCGGTTAAATTTGGAGA+TGG 0.613917 4_2:+73974837 Msa0621730:CDS
TTGTGGCTCAGGAAGCTGAT+GGG 0.614094 4_2:+73974817 Msa0621730:CDS
AATACCATGTATAACACCGT+CGG 0.614262 4_2:-73974220 None:intergenic
TGGAGGGAAAGAATGTTACC+GGG 0.615457 4_2:-73974036 None:intergenic
GCACCGGCGCCGGGACCAGG+AGG 0.618074 4_2:+73974453 Msa0621730:CDS
TTCAAGGTGGAGGTGATGGT+CGG 0.618083 4_2:-73974127 None:intergenic
ATGGGAGGATTTCTGTTCAG+GGG 0.623015 4_2:+73974901 Msa0621730:CDS
ATGAGTCGTTTAGTTTCGGA+GGG 0.628933 4_2:+73974597 Msa0621730:CDS
GGACCACACCATCACTTCAA+CGG 0.630152 4_2:+73974474 Msa0621730:CDS
GAAGGAGAATGAAGATGTGC+CGG 0.633274 4_2:+73974947 Msa0621730:CDS
AAACACTTTCTTCTCCAACC+CGG 0.635314 4_2:+73974018 Msa0621730:CDS
AATCATCCACGACGGCGCGT+GGG 0.643495 4_2:-73974257 None:intergenic
TCGTAAATCGGAATCTCCGG+TGG 0.643713 4_2:-73974399 None:intergenic
AATGACATTACCCGACCCGA+CGG 0.648279 4_2:+73974204 Msa0621730:CDS
ACGGAGGAGTTAAGTGAACC+GGG 0.650333 4_2:+73974672 Msa0621730:CDS
TGCTCCTTCTGGTTTAACAG+CGG 0.653860 4_2:-73974310 None:intergenic
TAGCAAAGTTCCTTAAAACA+AGG 0.656653 4_2:+73976337 Msa0621730:CDS
GAATTCGGGTTGGAATGACG+TGG 0.662643 4_2:-73974074 None:intergenic
GTTAACGGTGAATTCTCCAG+TGG 0.668443 4_2:-73974160 None:intergenic
AAGTGAACCGGGTTCACCGG+AGG 0.679744 4_2:+73974683 Msa0621730:CDS
AATTCGGGTTGGAATGACGT+GGG 0.684805 4_2:-73974073 None:intergenic
GGAGAATGAAGATGTGCCGG+TGG 0.687525 4_2:+73974950 Msa0621730:CDS
CGGTGGTTACAACGAAATGG+CGG 0.694396 4_2:+73974539 Msa0621730:CDS
TCTCCGTTGAAGTGATGGTG+TGG 0.694919 4_2:-73974477 None:intergenic
TGGTGACATCTGTTTCAAGG+TGG 0.703322 4_2:-73974140 None:intergenic
AAGACATTACTGCATTACGG+TGG 0.719316 4_2:+73974522 Msa0621730:CDS
GTTGTTGAAATCATCCACGA+CGG 0.726728 4_2:-73974265 None:intergenic
AATGGCGAAGTTAACGACGG+AGG 0.730607 4_2:+73974656 Msa0621730:CDS
AGCAATGGCGAAGTTAACGA+CGG 0.732441 4_2:+73974653 Msa0621730:CDS
TGATTGAACTGAGACTACGA+CGG 0.781592 4_2:-73974287 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATCTTTAATATCTTTAACTA+CGG + chr4_2:73975109-73975128 Msa0621730:intron 15.0%
!! AAAATGAATTATATGAAATC+AGG + chr4_2:73975546-73975565 Msa0621730:intron 15.0%
!! AAATGAATTATATGAAATCA+GGG + chr4_2:73975547-73975566 Msa0621730:intron 15.0%
!!! ATAAAATTTTACATCATAGA+AGG + chr4_2:73975936-73975955 Msa0621730:intron 15.0%
!! TAAAGATCAAAATTATGCAT+TGG - chr4_2:73975096-73975115 None:intergenic 20.0%
!! ACATTCTCATGATTATAATA+AGG - chr4_2:73975663-73975682 None:intergenic 20.0%
!! AAATTACATAATACTTGGAT+CGG - chr4_2:73975712-73975731 None:intergenic 20.0%
!! ATCCAAGTATTATGTAATTT+AGG + chr4_2:73975712-73975731 Msa0621730:intron 20.0%
!! ATTTCTAATACAAATAGGAA+AGG - chr4_2:73975797-73975816 None:intergenic 20.0%
!! TGTACATTTCTAATACAAAT+AGG - chr4_2:73975802-73975821 None:intergenic 20.0%
!! GAGTATAGTTAATTACAATT+AGG - chr4_2:73976444-73976463 None:intergenic 20.0%
! ATTAAAAAAATCTTCACCAC+CGG + chr4_2:73974362-73974381 Msa0621730:CDS 25.0%
!! ATCAATTAGGTCATTCATTT+TGG - chr4_2:73975061-73975080 None:intergenic 25.0%
! ACTGCAAGTAATTATAAACT+AGG + chr4_2:73975155-73975174 Msa0621730:intron 25.0%
!!! AGAATAGTTTTGTGGTTTTA+TGG + chr4_2:73975411-73975430 Msa0621730:intron 25.0%
! TATAAAGTAGTGTCTTCAAT+TGG + chr4_2:73975474-73975493 Msa0621730:intron 25.0%
! ATAAAGTAGTGTCTTCAATT+GGG + chr4_2:73975475-73975494 Msa0621730:intron 25.0%
! ATAATCATGAGAATGTGAAT+TGG + chr4_2:73975667-73975686 Msa0621730:intron 25.0%
! AGCCTAAATTACATAATACT+TGG - chr4_2:73975717-73975736 None:intergenic 25.0%
! TAGTTAATAGTTACTACTGA+TGG + chr4_2:73975742-73975761 Msa0621730:intron 25.0%
!! TACATGTTGAACTTTAAGAA+CGG + chr4_2:73975818-73975837 Msa0621730:intron 25.0%
! TTAAACTGGAATATACATGA+AGG - chr4_2:73976003-73976022 None:intergenic 25.0%
! TTAAAAATAGACCAACCATA+TGG + chr4_2:73976019-73976038 Msa0621730:intron 25.0%
! GTTGAAGAGATTTAATAGTT+AGG - chr4_2:73976086-73976105 None:intergenic 25.0%
! TAAATCTCTTCAACTAGAAT+TGG + chr4_2:73976092-73976111 Msa0621730:intron 25.0%
!!! TTTAATGTTTCTCTAAGGTT+TGG + chr4_2:73976158-73976177 Msa0621730:intron 25.0%
!! CTCTTGTAATTTAAAACTGA+TGG + chr4_2:73976199-73976218 Msa0621730:intron 25.0%
!!! TTGTTCAATACCTTGTTTTA+AGG - chr4_2:73976350-73976369 None:intergenic 25.0%
! TAGCTTAATTTCCTTCATTA+TGG + chr4_2:73976470-73976489 Msa0621730:three_prime_UTR 25.0%
! AAAGAGCAAAACAAAAATGT+GGG - chr4_2:73976625-73976644 None:intergenic 25.0%
! AAAAGAGCAAAACAAAAATG+TGG - chr4_2:73976626-73976645 None:intergenic 25.0%
! CAGAAAATCACTTATTGAAT+CGG - chr4_2:73976865-73976884 None:intergenic 25.0%
TGAAGATGAAGAAGAAAGAA+TGG - chr4_2:73973809-73973828 None:intergenic 30.0%
!! TGTTTTCTAGTGTTTGTAAG+AGG - chr4_2:73973924-73973943 None:intergenic 30.0%
!! GAAGAAAGTGTTTGAAATCT+GGG - chr4_2:73974011-73974030 None:intergenic 30.0%
!! AGAAGAAAGTGTTTGAAATC+TGG - chr4_2:73974012-73974031 None:intergenic 30.0%
ATCAAGACATTACTGCATTA+CGG + chr4_2:73974519-73974538 Msa0621730:CDS 30.0%
TTTGATACTCAGGGATAATA+TGG - chr4_2:73974722-73974741 None:intergenic 30.0%
TATTATCCCTGAGTATCAAA+CGG + chr4_2:73974722-73974741 Msa0621730:CDS 30.0%
AGAGTATGTATAATGCTGTT+AGG + chr4_2:73974748-73974767 Msa0621730:intron 30.0%
TATAATGCTGTTAGGAGATT+TGG + chr4_2:73974756-73974775 Msa0621730:intron 30.0%
ATAATGCTGTTAGGAGATTT+GGG + chr4_2:73974757-73974776 Msa0621730:intron 30.0%
TTAAATTTGGAGATGGTGAT+GGG + chr4_2:73974844-73974863 Msa0621730:CDS 30.0%
GTTTGATCCGGATATTTATA+CGG + chr4_2:73974878-73974897 Msa0621730:CDS 30.0%
! TTCTTTTGTTCCTTTAGACT+AGG + chr4_2:73975250-73975269 Msa0621730:intron 30.0%
!!! CAGTTTTGTTTTATGAGTGA+TGG + chr4_2:73975320-73975339 Msa0621730:intron 30.0%
AAAACAAACAAACCAGAACA+AGG - chr4_2:73975360-73975379 None:intergenic 30.0%
!!! TCTGGTTTGTTTGTTTTAGT+AGG + chr4_2:73975363-73975382 Msa0621730:intron 30.0%
!! GAAACTTGAGAATAGTTTTG+TGG + chr4_2:73975403-73975422 Msa0621730:intron 30.0%
! CATTCACAATTTGAAGTTGT+AGG - chr4_2:73975437-73975456 None:intergenic 30.0%
CTACAACTTCAAATTGTGAA+TGG + chr4_2:73975435-73975454 Msa0621730:intron 30.0%
!! AAGTTGTTGACTTGATGAAT+AGG + chr4_2:73975631-73975650 Msa0621730:intron 30.0%
!! AGTTGTTGACTTGATGAATA+GGG + chr4_2:73975632-73975651 Msa0621730:intron 30.0%
! GCAAAAAAAGATCGACATTT+TGG + chr4_2:73975911-73975930 Msa0621730:intron 30.0%
!!! TGGTTGGTCTATTTTTAAAC+TGG - chr4_2:73976017-73976036 None:intergenic 30.0%
GTCATAAGTGTGAAATGTAA+TGG + chr4_2:73976045-73976064 Msa0621730:intron 30.0%
GGTTGTTTAATGTTTCTCTA+AGG + chr4_2:73976153-73976172 Msa0621730:intron 30.0%
! GAATCTAGAATGGTTACTAA+AGG - chr4_2:73976279-73976298 None:intergenic 30.0%
!!! AAAAACCCCACGTTTTTTTA+TGG + chr4_2:73976313-73976332 Msa0621730:CDS 30.0%
TAGCAAAGTTCCTTAAAACA+AGG + chr4_2:73976337-73976356 Msa0621730:CDS 30.0%
CTTTCATTATTTCCTTCATG+TGG + chr4_2:73976652-73976671 Msa0621730:three_prime_UTR 30.0%
! CGATTCAATAAGTGATTTTC+TGG + chr4_2:73976863-73976882 Msa0621730:three_prime_UTR 30.0%
!! AAGTGATTTTCTGGAAAAAG+TGG + chr4_2:73976872-73976891 Msa0621730:three_prime_UTR 30.0%
! TTTGAGTTTATCTGACTCGT+TGG - chr4_2:73973835-73973854 None:intergenic 35.0%
!!! GTTTGCTTTTTCGATTAGGT+AGG - chr4_2:73973902-73973921 None:intergenic 35.0%
!!! AGAGGTTTGCTTTTTCGATT+AGG - chr4_2:73973906-73973925 None:intergenic 35.0%
! GGTTACTTTCTCTTGGTTAA+CGG - chr4_2:73974178-73974197 None:intergenic 35.0%
AATACCATGTATAACACCGT+CGG - chr4_2:73974223-73974242 None:intergenic 35.0%
!! AATTTTCTAGTGTCAGCTTC+TGG - chr4_2:73974336-73974355 None:intergenic 35.0%
!! TTCGGAGGGTTATGTTTTAA+CGG + chr4_2:73974611-73974630 Msa0621730:CDS 35.0%
!!! GGGTTATGTTTTAACGGTTT+TGG + chr4_2:73974617-73974636 Msa0621730:CDS 35.0%
TGGTAATACATTATCTCCTC+CGG - chr4_2:73974702-73974721 None:intergenic 35.0%
! AGGTTAGTTATGAGACTTTG+AGG + chr4_2:73974781-73974800 Msa0621730:intron 35.0%
!! GACTTTGAGGTTGAAGTATA+AGG + chr4_2:73974794-73974813 Msa0621730:CDS 35.0%
GTTAAATTTGGAGATGGTGA+TGG + chr4_2:73974843-73974862 Msa0621730:CDS 35.0%
ATCCGGATATTTATACGGAT+GGG + chr4_2:73974883-73974902 Msa0621730:CDS 35.0%
GTTAAACCCATTTCGATGAT+GGG + chr4_2:73974978-73974997 Msa0621730:intron 35.0%
TTATGAGTGATGGTATTGTG+TGG + chr4_2:73975330-73975349 Msa0621730:intron 35.0%
GAATGTGAATTGGAATTGCT+TGG + chr4_2:73975677-73975696 Msa0621730:intron 35.0%
! GAACTTTAAGAACGGTGAAA+TGG + chr4_2:73975826-73975845 Msa0621730:intron 35.0%
TTAAGAACGGTGAAATGGAA+TGG + chr4_2:73975831-73975850 Msa0621730:intron 35.0%
! CTACACTAAGAGTACATCAA+AGG - chr4_2:73975890-73975909 None:intergenic 35.0%
CTTATGACTTACCATATGGT+TGG - chr4_2:73976033-73976052 None:intergenic 35.0%
CACACTTATGACTTACCATA+TGG - chr4_2:73976037-73976056 None:intergenic 35.0%
TGTATTGTGACTGACAGTAT+TGG + chr4_2:73976132-73976151 Msa0621730:intron 35.0%
ATGGAATGAATGTTTCTTGC+AGG + chr4_2:73976218-73976237 Msa0621730:intron 35.0%
TGGAATGAATGTTTCTTGCA+GGG + chr4_2:73976219-73976238 Msa0621730:intron 35.0%
TGCTAGCCATAAAAAAACGT+GGG - chr4_2:73976322-73976341 None:intergenic 35.0%
TTGCTAGCCATAAAAAAACG+TGG - chr4_2:73976323-73976342 None:intergenic 35.0%
CATGTAAATGGCCATAATGA+AGG - chr4_2:73976484-73976503 None:intergenic 35.0%
! AGATAATGGCCAGCTATTAT+GGG + chr4_2:73976590-73976609 Msa0621730:three_prime_UTR 35.0%
AAAATCACACCCATAATAGC+TGG - chr4_2:73976602-73976621 None:intergenic 35.0%
AGAATGTTTCTCCAATGTCA+TGG + chr4_2:73976763-73976782 Msa0621730:three_prime_UTR 35.0%
AGGATTGTGTTAGGATTTCA+TGG + chr4_2:73976792-73976811 Msa0621730:three_prime_UTR 35.0%
!!! TGGTTTTTTGAACTGTAACC+AGG + chr4_2:73976812-73976831 Msa0621730:three_prime_UTR 35.0%
ATCAAAAATGGTTCAATGCC+TGG - chr4_2:73976833-73976852 None:intergenic 35.0%
!! GGCATTGAACCATTTTTGAT+AGG + chr4_2:73976833-73976852 Msa0621730:three_prime_UTR 35.0%
TTGTTGTAATACAACATGCC+TGG + chr4_2:73976918-73976937 Msa0621730:three_prime_UTR 35.0%
GAAGAAGAATGCAAGAGATG+TGG - chr4_2:73973768-73973787 None:intergenic 40.0%
! AGTGTTTGAAATCTGGGTCA+AGG - chr4_2:73974005-73974024 None:intergenic 40.0%
AAACACTTTCTTCTCCAACC+CGG + chr4_2:73974018-73974037 Msa0621730:CDS 40.0%
TTGGAGGGAAAGAATGTTAC+CGG - chr4_2:73974040-73974059 None:intergenic 40.0%
ATTCCAACCCGAATTCATTC+CGG + chr4_2:73974081-73974100 Msa0621730:CDS 40.0%
! GTCGGAGATGGATTTGAAAA+GGG - chr4_2:73974112-73974131 None:intergenic 40.0%
ATACCATGTATAACACCGTC+GGG - chr4_2:73974222-73974241 None:intergenic 40.0%
GTTGTTGAAATCATCCACGA+CGG - chr4_2:73974268-73974287 None:intergenic 40.0%
TGATTGAACTGAGACTACGA+CGG - chr4_2:73974290-73974309 None:intergenic 40.0%
GGAGCTAAAGCTTCGTAAAT+CGG - chr4_2:73974414-73974433 None:intergenic 40.0%
! GATTTACGAAGCTTTAGCTC+CGG + chr4_2:73974413-73974432 Msa0621730:CDS 40.0%
! ATTTACGAAGCTTTAGCTCC+GGG + chr4_2:73974414-73974433 Msa0621730:CDS 40.0%
AAGACATTACTGCATTACGG+TGG + chr4_2:73974522-73974541 Msa0621730:CDS 40.0%
TTACGGTGGTTACAACGAAA+TGG + chr4_2:73974536-73974555 Msa0621730:CDS 40.0%
! GGAGATGAGTCGTTTAGTTT+CGG + chr4_2:73974593-73974612 Msa0621730:CDS 40.0%
! ATGAGTCGTTTAGTTTCGGA+GGG + chr4_2:73974597-73974616 Msa0621730:CDS 40.0%
TCTCTTCCGTTTGATACTCA+GGG - chr4_2:73974731-73974750 None:intergenic 40.0%
GAGGTTGAAGTATAAGGTTG+TGG + chr4_2:73974800-73974819 Msa0621730:CDS 40.0%
GTCGGGTTATTTGTTTGATC+CGG + chr4_2:73974866-73974885 Msa0621730:CDS 40.0%
GATCCGGATATTTATACGGA+TGG + chr4_2:73974882-73974901 Msa0621730:CDS 40.0%
CTCCCATCCGTATAAATATC+CGG - chr4_2:73974888-73974907 None:intergenic 40.0%
ATTTCTGTTCAGGGGATTGA+TGG + chr4_2:73974909-73974928 Msa0621730:CDS 40.0%
TTTCTGTTCAGGGGATTGAT+GGG + chr4_2:73974910-73974929 Msa0621730:CDS 40.0%
ACATCTTCATTCTCCTTCAC+AGG - chr4_2:73974945-73974964 None:intergenic 40.0%
GGTTAAACCCATTTCGATGA+TGG + chr4_2:73974977-73974996 Msa0621730:intron 40.0%
ATGACCTAATTGATTGTCGC+AGG + chr4_2:73975067-73975086 Msa0621730:intron 40.0%
GAAACCTGCGACAATCAATT+AGG - chr4_2:73975074-73975093 None:intergenic 40.0%
TTGTTCCTTTAGACTAGGAG+AGG + chr4_2:73975255-73975274 Msa0621730:intron 40.0%
! GGAGATGATAGTGATGTGTT+TGG + chr4_2:73975276-73975295 Msa0621730:intron 40.0%
! ATGATAGTGATGTGTTTGGC+TGG + chr4_2:73975280-73975299 Msa0621730:intron 40.0%
GACAAGAGGTGAATCTAGAA+TGG - chr4_2:73976289-73976308 None:intergenic 40.0%
! TGGGGTTTTTCATTGACAAG+AGG - chr4_2:73976303-73976322 None:intergenic 40.0%
GCTAGCCATAAAAAAACGTG+GGG - chr4_2:73976321-73976340 None:intergenic 40.0%
! GCAAGCTATCACTTTGTTTG+TGG + chr4_2:73976377-73976396 Msa0621730:three_prime_UTR 40.0%
CATGCTTTGATGCAGATTCA+CGG + chr4_2:73976514-73976533 Msa0621730:three_prime_UTR 40.0%
ATCGAATATGAAGATCTCGC+TGG + chr4_2:73976567-73976586 Msa0621730:three_prime_UTR 40.0%
! GAGATAATGGCCAGCTATTA+TGG + chr4_2:73976589-73976608 Msa0621730:three_prime_UTR 40.0%
ATGACTGGAAATCCACATGA+AGG - chr4_2:73976667-73976686 None:intergenic 40.0%
TGTTTCTCCAATGTCATGGT+TGG + chr4_2:73976767-73976786 Msa0621730:three_prime_UTR 40.0%
GTTTCTCCAATGTCATGGTT+GGG + chr4_2:73976768-73976787 Msa0621730:three_prime_UTR 40.0%
! GTGAGTCGAGTAGTGCTATT+AGG - chr4_2:73973864-73973883 None:intergenic 45.0%
TGGAGGGAAAGAATGTTACC+GGG - chr4_2:73974039-73974058 None:intergenic 45.0%
!! AATTCGGGTTGGAATGACGT+GGG - chr4_2:73974076-73974095 None:intergenic 45.0%
TTCCAACCCGAATTCATTCC+GGG + chr4_2:73974082-73974101 Msa0621730:CDS 45.0%
GGATTTGAAAAGGGTTGACC+CGG - chr4_2:73974103-73974122 None:intergenic 45.0%
! GGTCGGAGATGGATTTGAAA+AGG - chr4_2:73974113-73974132 None:intergenic 45.0%
TGACATCTGTTTCAAGGTGG+AGG - chr4_2:73974140-73974159 None:intergenic 45.0%
TGGTGACATCTGTTTCAAGG+TGG - chr4_2:73974143-73974162 None:intergenic 45.0%
CAGTGGTGACATCTGTTTCA+AGG - chr4_2:73974146-73974165 None:intergenic 45.0%
CTTGAAACAGATGTCACCAC+TGG + chr4_2:73974144-73974163 Msa0621730:CDS 45.0%
GTTAACGGTGAATTCTCCAG+TGG - chr4_2:73974163-73974182 None:intergenic 45.0%
ATCACCGCTGTTAAACCAGA+AGG + chr4_2:73974306-73974325 Msa0621730:CDS 45.0%
!! TGCTCCTTCTGGTTTAACAG+CGG - chr4_2:73974313-73974332 None:intergenic 45.0%
GCTTCGTAAATCGGAATCTC+CGG - chr4_2:73974405-73974424 None:intergenic 45.0%
GTAACTCTCCGTTGAAGTGA+TGG - chr4_2:73974485-73974504 None:intergenic 45.0%
CAACGGAGAGTTACAAGTGA+AGG + chr4_2:73974491-73974510 Msa0621730:CDS 45.0%
AAACCTAACGTCGTTAGCGA+CGG + chr4_2:73974572-73974591 Msa0621730:CDS 45.0%
! GATGAGTCGTTTAGTTTCGG+AGG + chr4_2:73974596-73974615 Msa0621730:CDS 45.0%
TTCGCCATTGCTTCGTCATT+CGG - chr4_2:73974645-73974664 None:intergenic 45.0%
AGCAATGGCGAAGTTAACGA+CGG + chr4_2:73974653-73974672 Msa0621730:CDS 45.0%
CTCTCTTCCGTTTGATACTC+AGG - chr4_2:73974732-73974751 None:intergenic 45.0%
TGCTGTTAGGAGATTTGGGA+AGG + chr4_2:73974761-73974780 Msa0621730:intron 45.0%
GAAGTATAAGGTTGTGGCTC+AGG + chr4_2:73974806-73974825 Msa0621730:CDS 45.0%
! GCTGATGGGTCGGTTAAATT+TGG + chr4_2:73974831-73974850 Msa0621730:CDS 45.0%
GGGTCGGTTAAATTTGGAGA+TGG + chr4_2:73974837-73974856 Msa0621730:CDS 45.0%
!! ATTTGGAGATGGTGATGGGT+CGG + chr4_2:73974848-73974867 Msa0621730:CDS 45.0%
CGGATATTTATACGGATGGG+AGG + chr4_2:73974886-73974905 Msa0621730:CDS 45.0%
GATGGGAGGATTTCTGTTCA+GGG + chr4_2:73974900-73974919 Msa0621730:CDS 45.0%
ATGGGAGGATTTCTGTTCAG+GGG + chr4_2:73974901-73974920 Msa0621730:CDS 45.0%
TTCTGTTCAGGGGATTGATG+GGG + chr4_2:73974911-73974930 Msa0621730:CDS 45.0%
!!! TGGGGTTTTGTTTCCTGTGA+AGG + chr4_2:73974929-73974948 Msa0621730:CDS 45.0%
GAAGGAGAATGAAGATGTGC+CGG + chr4_2:73974947-73974966 Msa0621730:CDS 45.0%
GGTTGACCCATCATCGAAAT+GGG - chr4_2:73974987-73975006 None:intergenic 45.0%
!!! GGTCATTCATTTTGGAACCG+AGG - chr4_2:73975053-73975072 None:intergenic 45.0%
CATCTCCTCTCCTAGTCTAA+AGG - chr4_2:73975263-73975282 None:intergenic 45.0%
AGTGTCTTCAATTGGGCGTT+TGG + chr4_2:73975482-73975501 Msa0621730:intron 45.0%
GAGTACATCAAAGGCAGTTC+AGG - chr4_2:73975881-73975900 None:intergenic 45.0%
GTTTCTTGCAGGGAAACTAC+TGG + chr4_2:73976229-73976248 Msa0621730:intron 45.0%
AACTACTGGAAACAGCATGC+TGG + chr4_2:73976243-73976262 Msa0621730:CDS 45.0%
TGTGCTAGCAGGCATGTAAA+TGG - chr4_2:73976496-73976515 None:intergenic 45.0%
! GATGCAGATTCACGGATTGA+TGG + chr4_2:73976522-73976541 Msa0621730:three_prime_UTR 45.0%
GAAGATCTCGCTGGAGATAA+TGG + chr4_2:73976576-73976595 Msa0621730:three_prime_UTR 45.0%
TTTGCTCACTCGTCTATGAC+TGG - chr4_2:73976682-73976701 None:intergenic 45.0%
ATCCTACCCAACCATGACAT+TGG - chr4_2:73976777-73976796 None:intergenic 45.0%
TGGTTGGGTAGGATTGTGTT+AGG + chr4_2:73976783-73976802 Msa0621730:three_prime_UTR 45.0%
GTAATACAACATGCCTGGCT+AGG + chr4_2:73976923-73976942 Msa0621730:three_prime_UTR 45.0%
TGGGTCAAGGTTACGTTCGA+GGG - chr4_2:73973992-73974011 None:intergenic 50.0%
GGGAAAGAATGTTACCGGGT+TGG - chr4_2:73974035-73974054 None:intergenic 50.0%
AATGACGTGGGAAAGGAGGA+GGG - chr4_2:73974064-73974083 None:intergenic 50.0%
TTGGAATGACGTGGGAAAGG+AGG - chr4_2:73974068-73974087 None:intergenic 50.0%
!! GAATTCGGGTTGGAATGACG+TGG - chr4_2:73974077-73974096 None:intergenic 50.0%
GGTTGACCCGGAATGAATTC+GGG - chr4_2:73974091-73974110 None:intergenic 50.0%
GGGTTGACCCGGAATGAATT+CGG - chr4_2:73974092-73974111 None:intergenic 50.0%
! TTCAAGGTGGAGGTGATGGT+CGG - chr4_2:73974130-73974149 None:intergenic 50.0%
CTGTTTCAAGGTGGAGGTGA+TGG - chr4_2:73974134-73974153 None:intergenic 50.0%
!! TCGGGTGGGTTACTTTCTCT+TGG - chr4_2:73974185-73974204 None:intergenic 50.0%
TCGGGTAATGTCATTCGGGT+GGG - chr4_2:73974199-73974218 None:intergenic 50.0%
TCGGGTCGGGTAATGTCATT+CGG - chr4_2:73974204-73974223 None:intergenic 50.0%
AATGACATTACCCGACCCGA+CGG + chr4_2:73974204-73974223 Msa0621730:CDS 50.0%
ATGTATAACACCGTCGGGTC+GGG - chr4_2:73974217-73974236 None:intergenic 50.0%
CATGTATAACACCGTCGGGT+CGG - chr4_2:73974218-73974237 None:intergenic 50.0%
TCTTCACCACCGGAAAAACC+AGG + chr4_2:73974372-73974391 Msa0621730:CDS 50.0%
!! GGTGGTGAACCTGGTTTTTC+CGG - chr4_2:73974384-73974403 None:intergenic 50.0%
GGAAAAACCAGGTTCACCAC+CGG + chr4_2:73974383-73974402 Msa0621730:CDS 50.0%
TCGTAAATCGGAATCTCCGG+TGG - chr4_2:73974402-73974421 None:intergenic 50.0%
GGACCACACCATCACTTCAA+CGG + chr4_2:73974474-73974493 Msa0621730:CDS 50.0%
! TCTCCGTTGAAGTGATGGTG+TGG - chr4_2:73974480-73974499 None:intergenic 50.0%
CGGTGGTTACAACGAAATGG+CGG + chr4_2:73974539-73974558 Msa0621730:CDS 50.0%
AATGGCGAAGTTAACGACGG+AGG + chr4_2:73974656-73974675 Msa0621730:CDS 50.0%
GACGGAGGAGTTAAGTGAAC+CGG + chr4_2:73974671-73974690 Msa0621730:CDS 50.0%
ACGGAGGAGTTAAGTGAACC+GGG + chr4_2:73974672-73974691 Msa0621730:CDS 50.0%
GTTAAGTGAACCGGGTTCAC+CGG + chr4_2:73974680-73974699 Msa0621730:CDS 50.0%
ATTATCTCCTCCGGTGAACC+CGG - chr4_2:73974693-73974712 None:intergenic 50.0%
TTGTGGCTCAGGAAGCTGAT+GGG + chr4_2:73974817-73974836 Msa0621730:CDS 50.0%
!! TTTGGAGATGGTGATGGGTC+GGG + chr4_2:73974849-73974868 Msa0621730:CDS 50.0%
GGATGGGAGGATTTCTGTTC+AGG + chr4_2:73974899-73974918 Msa0621730:CDS 50.0%
GGGTTGACCCATCATCGAAA+TGG - chr4_2:73974988-73975007 None:intergenic 50.0%
!! TTTCGATGATGGGTCAACCC+AGG + chr4_2:73974988-73975007 Msa0621730:intron 50.0%
!! ATGATGGGTCAACCCAGGAA+AGG + chr4_2:73974993-73975012 Msa0621730:intron 50.0%
TGTTCAACGACGCCTTTCCT+GGG - chr4_2:73975008-73975027 None:intergenic 50.0%
ATGTTCAACGACGCCTTTCC+TGG - chr4_2:73975009-73975028 None:intergenic 50.0%
GGCGTCGTTGAACATAGAAG+AGG + chr4_2:73975014-73975033 Msa0621730:intron 50.0%
GAGGTGCGTTACTACTTCCT+CGG + chr4_2:73975033-73975052 Msa0621730:intron 50.0%
TTGTGTGGCAGACCTTGTTC+TGG + chr4_2:73975345-73975364 Msa0621730:intron 50.0%
GAAACAGCATGCTGGATGCT+TGG + chr4_2:73976251-73976270 Msa0621730:CDS 50.0%
GCATCAAAGCATGTGCTAGC+AGG - chr4_2:73976507-73976526 None:intergenic 50.0%
CTCCAATGTCATGGTTGGGT+AGG + chr4_2:73976772-73976791 Msa0621730:three_prime_UTR 50.0%
CGGCGCAAGCCTATCAAAAA+TGG - chr4_2:73976845-73976864 None:intergenic 50.0%
CGTTCGAGGGCTACGTTGTT+TGG - chr4_2:73973979-73973998 None:intergenic 55.0%
CTGGGTCAAGGTTACGTTCG+AGG - chr4_2:73973993-73974012 None:intergenic 55.0%
GGAAAGGAGGAGGGTTTGGA+GGG - chr4_2:73974055-73974074 None:intergenic 55.0%
GAATGACGTGGGAAAGGAGG+AGG - chr4_2:73974065-73974084 None:intergenic 55.0%
GGGTTGGAATGACGTGGGAA+AGG - chr4_2:73974071-73974090 None:intergenic 55.0%
GACCCGGAATGAATTCGGGT+TGG - chr4_2:73974087-73974106 None:intergenic 55.0%
GTCGGGTAATGTCATTCGGG+TGG - chr4_2:73974200-73974219 None:intergenic 55.0%
CGGGTCGGGTAATGTCATTC+GGG - chr4_2:73974203-73974222 None:intergenic 55.0%
!! CGACCCGACGGTGTTATACA+TGG + chr4_2:73974216-73974235 Msa0621730:CDS 55.0%
TCAGCTTCTGGTGCTCCTTC+TGG - chr4_2:73974324-73974343 None:intergenic 55.0%
!! GGTGAACCTGGTTTTTCCGG+TGG - chr4_2:73974381-73974400 None:intergenic 55.0%
! AAGTGATGGTGTGGTCCTCC+TGG - chr4_2:73974471-73974490 None:intergenic 55.0%
TCTCCGTCGCTAACGACGTT+AGG - chr4_2:73974578-73974597 None:intergenic 55.0%
GTTGTGGCTCAGGAAGCTGA+TGG + chr4_2:73974816-73974835 Msa0621730:CDS 55.0%
GGAGAATGAAGATGTGCCGG+TGG + chr4_2:73974950-73974969 Msa0621730:CDS 55.0%
! ATGAAGATGTGCCGGTGGAG+CGG + chr4_2:73974955-73974974 Msa0621730:CDS 55.0%
ATGGGTTTAACCCGCTCCAC+CGG - chr4_2:73974969-73974988 None:intergenic 55.0%
GGGAAAGGAGGAGGGTTTGG+AGG - chr4_2:73974056-73974075 None:intergenic 60.0%
CGTGGGAAAGGAGGAGGGTT+TGG - chr4_2:73974059-73974078 None:intergenic 60.0%
! GTGGAGGTGATGGTCGGAGA+TGG - chr4_2:73974124-73974143 None:intergenic 60.0%
AATCATCCACGACGGCGCGT+GGG - chr4_2:73974260-73974279 None:intergenic 60.0%
AAATCATCCACGACGGCGCG+TGG - chr4_2:73974261-73974280 None:intergenic 60.0%
GGAATCTCCGGTGGTGAACC+TGG - chr4_2:73974393-73974412 None:intergenic 60.0%
TCCGGGACCATCACTAGCTC+CGG + chr4_2:73974431-73974450 Msa0621730:CDS 60.0%
ACCATCACTAGCTCCGGCAC+CGG + chr4_2:73974437-73974456 Msa0621730:CDS 60.0%
! GGCGCCGAATGACGAAGCAA+TGG + chr4_2:73974638-73974657 Msa0621730:CDS 60.0%
AAGTGAACCGGGTTCACCGG+AGG + chr4_2:73974683-73974702 Msa0621730:CDS 60.0%
! GGCTCAGGAAGCTGATGGGT+CGG + chr4_2:73974821-73974840 Msa0621730:CDS 60.0%
! TGAAGATGTGCCGGTGGAGC+GGG + chr4_2:73974956-73974975 Msa0621730:CDS 60.0%
TCTTATCCCACGCGCCGTCG+TGG + chr4_2:73974251-73974270 Msa0621730:CDS 65.0%
GCCGGAGCTAGTGATGGTCC+CGG - chr4_2:73974435-73974454 None:intergenic 65.0%
TGGTGTGGTCCTCCTGGTCC+CGG - chr4_2:73974465-73974484 None:intergenic 65.0%
! GCCGGTGCCGGAGCTAGTGA+TGG - chr4_2:73974441-73974460 None:intergenic 70.0%
!! ACTAGCTCCGGCACCGGCGC+CGG + chr4_2:73974443-73974462 Msa0621730:CDS 75.0%
!!! CTAGCTCCGGCACCGGCGCC+GGG + chr4_2:73974444-73974463 Msa0621730:CDS 80.0%
! GGTCCTCCTGGTCCCGGCGC+CGG - chr4_2:73974459-73974478 None:intergenic 80.0%
!!! CCTGGTCCCGGCGCCGGTGC+CGG - chr4_2:73974453-73974472 None:intergenic 85.0%
!! GCACCGGCGCCGGGACCAGG+AGG + chr4_2:73974453-73974472 Msa0621730:CDS 85.0%
!!! CCGGCACCGGCGCCGGGACC+AGG + chr4_2:73974450-73974469 Msa0621730:CDS 90.0%
Chromosome Type Strat End Strand Name
chr4_2 gene 73973757 73976952 73973757 ID=Msa0621730;Name=Msa0621730
chr4_2 mRNA 73973757 73976952 73973757 ID=Msa0621730-mRNA-1;Parent=Msa0621730;Name=Msa0621730-mRNA-1;_AED=0.06;_eAED=0.06;_QI=0|0|0.25|1|0.33|0.25|4|587|437
chr4_2 exon 73973757 73973997 73973757 ID=Msa0621730-mRNA-1:exon:22214;Parent=Msa0621730-mRNA-1
chr4_2 exon 73974013 73974764 73974013 ID=Msa0621730-mRNA-1:exon:22215;Parent=Msa0621730-mRNA-1
chr4_2 exon 73974783 73974977 73974783 ID=Msa0621730-mRNA-1:exon:22216;Parent=Msa0621730-mRNA-1
chr4_2 exon 73976240 73976952 73976240 ID=Msa0621730-mRNA-1:exon:22217;Parent=Msa0621730-mRNA-1
chr4_2 CDS 73973757 73973997 73973757 ID=Msa0621730-mRNA-1:cds;Parent=Msa0621730-mRNA-1
chr4_2 CDS 73974013 73974764 73974013 ID=Msa0621730-mRNA-1:cds;Parent=Msa0621730-mRNA-1
chr4_2 CDS 73974783 73974977 73974783 ID=Msa0621730-mRNA-1:cds;Parent=Msa0621730-mRNA-1
chr4_2 CDS 73976240 73976365 73976240 ID=Msa0621730-mRNA-1:cds;Parent=Msa0621730-mRNA-1
chr4_2 three_prime_UTR 73976366 73976952 73976366 ID=Msa0621730-mRNA-1:three_prime_utr;Parent=Msa0621730-mRNA-1
Gene Sequence

>Msa0621730

ATGGCTCACCACATCTCTTGCATTCTTCTTCTTCTTCTTTTCTCTCTATCCATTCTTTCTTCTTCATCTTCATCACCAACGAGTCAGATAAACTCAAACTCAATCCTAATAGCACTACTCGACTCACATTACACTGAACTCACCTACCTAATCGAAAAAGCAAACCTCTTACAAACACTAGAAAACACTGTCTCAAAACACAACATTACAATCTTTGCACCAAACAACGTAGCCCTCGAACATTTCAAACACTTTCTTCTCCAACCCGGTAACATTCTTTCCCTCCAAACCCTCCTCCTTTCCCACGTCATTCCAACCCGAATTCATTCCGGGTCAACCCTTTTCAAATCCATCTCCGACCATCACCTCCACCTTGAAACAGATGTCACCACTGGAGAATTCACCGTTAACCAAGAGAAAGTAACCCACCCGAATGACATTACCCGACCCGACGGTGTTATACATGGTATTCAGAAAATTCTTATCCCACGCGCCGTCGTGGATGATTTCAACAACCGTCGTAGTCTCAGTTCAATCACCGCTGTTAAACCAGAAGGAGCACCAGAAGCTGACACTAGAAAATTGAAAAAATTAAAAAAATCTTCACCACCGGAAAAACCAGGTTCACCACCGGAGATTCCGATTTACGAAGCTTTAGCTCCGGGACCATCACTAGCTCCGGCACCGGCGCCGGGACCAGGAGGACCACACCATCACTTCAACGGAGAGTTACAAGTGAAGGATTTCATCAAGACATTACTGCATTACGGTGGTTACAACGAAATGGCGGATATACTCGTAAACCTAACGTCGTTAGCGACGGAGATGAGTCGTTTAGTTTCGGAGGGTTATGTTTTAACGGTTTTGGCGCCGAATGACGAAGCAATGGCGAAGTTAACGACGGAGGAGTTAAGTGAACCGGGTTCACCGGAGGAGATAATGTATTACCATATTATCCCTGAGTATCAAACGGAAGAGAGTATGTATAATGCTGTTAGTTATGAGACTTTGAGGTTGAAGTATAAGGTTGTGGCTCAGGAAGCTGATGGGTCGGTTAAATTTGGAGATGGTGATGGGTCGGGTTATTTGTTTGATCCGGATATTTATACGGATGGGAGGATTTCTGTTCAGGGGATTGATGGGGTTTTGTTTCCTGTGAAGGAGAATGAAGATGTGCCGGTGGAGCGGGGAAACTACTGGAAACAGCATGCTGGATGCTTGGAACCTTTAGTAACCATTCTAGATTCACCTCTTGTCAATGAAAAACCCCACGTTTTTTTATGGCTAGCAAAGTTCCTTAAAACAAGGTATTGA
Protein sequence

>Msa0621730

MAHHISCILLLLLFSLSILSSSSSSPTSQINSNSILIALLDSHYTELTYLIEKANLLQTLENTVSKHNITIFAPNNVALEHFKHFLLQPGNILSLQTLLLSHVIPTRIHSGSTLFKSISDHHLHLETDVTTGEFTVNQEKVTHPNDITRPDGVIHGIQKILIPRAVVDDFNNRRSLSSITAVKPEGAPEADTRKLKKLKKSSPPEKPGSPPEIPIYEALAPGPSLAPAPAPGPGGPHHHFNGELQVKDFIKTLLHYGGYNEMADILVNLTSLATEMSRLVSEGYVLTVLAPNDEAMAKLTTEELSEPGSPEEIMYYHIIPEYQTEESMYNAVSYETLRLKYKVVAQEADGSVKFGDGDGSGYLFDPDIYTDGRISVQGIDGVLFPVKENEDVPVERGNYWKQHAGCLEPLVTILDSPLVNEKPHVFLWLAKFLKTRY*