AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1440590

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1440590 MtrunA17_Chr1g0155701 97.460 748 15 1 1 748 1 744 0.0 1525
Msa1440590 MtrunA17_Chr3g0142001 79.240 737 142 5 1 734 1 729 0.0 1226
Msa1440590 MtrunA17_Chr8g0372421 72.306 733 197 3 1 732 1 728 0.0 1137
Msa1440590 MtrunA17_Chr5g0404841 71.973 735 197 4 1 734 1 727 0.0 1122
Msa1440590 MtrunA17_Chr8g0342001 64.807 753 244 10 8 749 4 746 0.0 996
Msa1440590 MtrunA17_Chr2g0330291 64.795 730 242 8 28 749 27 749 0.0 969
Msa1440590 MtrunA17_Chr2g0299161 62.295 732 265 6 1 730 3 725 0.0 966
Msa1440590 MtrunA17_Chr1g0152571 62.906 709 254 6 25 730 27 729 0.0 949
Msa1440590 MtrunA17_Chr2g0326481 55.014 738 299 10 9 734 7 723 0.0 825
Msa1440590 MtrunA17_Chr4g0029301 55.135 740 300 12 9 734 8 729 0.0 803
Msa1440590 MtrunA17_Chr3g0130711 51.015 739 340 9 13 739 14 742 0.0 764
Msa1440590 MtrunA17_Chr8g0378221 50.475 737 317 11 28 727 49 774 0.0 728
Msa1440590 MtrunA17_Chr2g0301001 46.837 743 371 10 6 732 2 736 0.0 690
Msa1440590 MtrunA17_Chr3g0124931 49.929 705 308 12 27 727 24 687 0.0 673
Msa1440590 MtrunA17_Chr5g0406921 47.820 711 349 10 29 727 28 728 0.0 669
Msa1440590 MtrunA17_Chr5g0408371 47.222 720 351 13 29 734 28 732 0.0 663
Msa1440590 MtrunA17_Chr3g0130721 48.438 704 326 10 29 727 27 698 0.0 661
Msa1440590 MtrunA17_Chr3g0077531 46.027 730 368 12 3 719 2 718 0.0 654
Msa1440590 MtrunA17_Chr4g0037031 44.809 732 360 12 10 728 11 711 0.0 638
Msa1440590 MtrunA17_Chr3g0145581 45.339 708 346 13 28 728 34 707 0.0 635
Msa1440590 MtrunA17_Chr2g0326491 55.114 528 160 7 9 478 8 516 0.0 588
Msa1440590 MtrunA17_Chr2g0326441 67.596 287 88 1 9 295 7 288 2.72e-144 425
Msa1440590 MtrunA17_Chr2g0326451 44.028 427 201 7 329 734 25 434 1.18e-113 355
Msa1440590 MtrunA17_Chr4g0071281 50.725 207 99 3 517 722 39 243 3.74e-61 206
Msa1440590 MtrunA17_Chr2g0326521 43.379 219 92 5 519 732 4 195 6.75e-47 169
Msa1440590 MtrunA17_Chr4g0071291 60.938 128 18 1 24 151 17 112 9.88e-44 154
Msa1440590 MtrunA17_Chr8g0372581 53.846 143 47 2 147 289 6 129 2.77e-43 153
Msa1440590 MtrunA17_Chr5g0405781 34.737 285 97 8 80 363 10 206 1.44e-37 144
Msa1440590 MtrunA17_Chr2g0330191 32.782 363 186 11 39 365 64 404 4.59e-36 145
Msa1440590 MtrunA17_Chr2g0307981 29.968 317 185 10 409 719 6 291 4.35e-32 127
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1440590 AT1G45130.1 72.603 730 193 4 6 733 8 732 0.0 1134
Msa1440590 AT4G36360.1 69.863 730 215 2 4 732 8 733 0.0 1111
Msa1440590 AT4G36360.2 69.863 730 215 2 4 732 8 733 0.0 1110
Msa1440590 AT1G45130.2 72.360 644 173 2 91 733 14 653 0.0 1002
Msa1440590 AT3G13750.1 64.714 734 242 8 5 734 16 736 0.0 984
Msa1440590 AT4G26140.1 62.621 725 257 8 9 730 12 725 0.0 959
Msa1440590 AT3G52840.2 62.833 713 254 6 22 730 73 778 0.0 952
Msa1440590 AT3G52840.1 62.833 713 254 6 22 730 19 724 0.0 951
Msa1440590 AT4G26140.7 60.667 750 256 9 9 730 12 750 0.0 945
Msa1440590 AT5G56870.1 60.739 731 278 6 1 730 1 723 0.0 923
Msa1440590 AT4G26140.9 59.833 717 249 9 9 697 12 717 0.0 893
Msa1440590 AT2G28470.1 56.844 716 285 9 28 730 31 735 0.0 832
Msa1440590 AT2G28470.3 56.844 716 285 9 28 730 31 735 0.0 832
Msa1440590 AT2G28470.2 56.844 716 285 9 28 730 25 729 0.0 831
Msa1440590 AT2G28470.4 56.844 716 285 9 28 730 25 729 0.0 831
Msa1440590 AT4G26140.3 62.119 623 225 6 9 631 12 623 0.0 818
Msa1440590 AT4G26140.2 62.119 623 225 6 9 631 12 623 0.0 818
Msa1440590 AT4G26140.6 62.080 625 224 7 9 631 12 625 0.0 815
Msa1440590 AT2G28470.5 56.745 682 271 9 27 695 30 700 0.0 783
Msa1440590 AT5G63810.1 49.461 742 358 7 1 732 4 738 0.0 763
Msa1440590 AT2G32810.1 50.334 749 330 12 9 727 19 755 0.0 752
Msa1440590 AT2G32810.2 50.000 752 335 11 6 727 15 755 0.0 751
Msa1440590 AT4G26140.8 64.388 556 186 6 9 562 12 557 0.0 744
Msa1440590 AT4G26140.4 61.790 581 185 7 9 562 12 582 0.0 731
Msa1440590 AT4G26140.5 61.790 581 185 7 9 562 12 582 0.0 731
Msa1440590 AT5G20710.1 48.253 744 366 10 1 734 1 735 0.0 707
Msa1440590 AT1G77410.1 48.006 727 328 17 9 727 8 692 0.0 654
Msa1440590 AT5G63800.1 47.218 737 333 15 6 727 7 702 0.0 652
Msa1440590 AT1G77410.3 47.678 732 328 18 9 727 8 697 0.0 649
Msa1440590 AT1G31740.1 45.674 705 323 10 29 722 22 677 0.0 640
Msa1440590 AT2G16730.1 45.506 701 336 11 28 717 43 708 0.0 620
Msa1440590 AT4G35010.1 44.763 697 347 11 28 717 40 705 0.0 604
Msa1440590 AT4G38590.1 43.815 671 336 13 59 720 1 639 0.0 550
Msa1440590 AT4G38590.2 43.111 675 339 14 55 720 65 703 2.37e-177 536
Msa1440590 AT1G77410.2 46.787 607 276 16 129 727 19 586 2.45e-173 514
Msa1440590 AT1G77410.4 46.787 607 276 16 129 727 19 586 2.45e-173 514
Msa1440590 AT5G20710.2 43.309 538 287 9 207 734 1 530 1.82e-151 455
Msa1440590 AT2G04060.1 32.609 368 172 8 298 664 23 315 3.29e-52 189
Msa1440590 AT1G72990.3 34.551 356 190 10 39 364 18 360 7.33e-44 168
Msa1440590 AT1G72990.1 34.551 356 190 10 39 364 73 415 9.06e-44 169
Msa1440590 AT1G72990.4 34.551 356 190 10 39 364 73 415 9.06e-44 169
Msa1440590 AT1G72990.2 33.333 345 187 10 50 364 22 353 2.48e-38 152
Msa1440590 AT2G04062.1 41.279 172 80 2 29 200 7 157 1.13e-34 129

Find 195 sgRNAs with CRISPR-Local

Find 315 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTACTTGTGAAAGAATTAT+TGG 0.133829 tig0029094:-2050 None:intergenic
TTCTTCTCTATCTTCTTTCT+TGG 0.154990 tig0029094:+1154 Msa1440590:CDS
AACTTTATTCTTCATAATTA+TGG 0.177081 tig0029094:-5353 None:intergenic
TTTAGGCTTGTATGGTTTAT+TGG 0.180144 tig0029094:-2595 None:intergenic
CTGACTTCCATGATTCAAAA+TGG 0.224983 tig0029094:-4443 None:intergenic
TGAGTGTCAATGTATTTATT+TGG 0.236454 tig0029094:+5478 Msa1440590:three_prime_UTR
AATTACAAATCAACCTTAAA+AGG 0.254271 tig0029094:-1862 None:intergenic
CACAAACAGGTTGGCCTAAA+GGG 0.278304 tig0029094:+4651 Msa1440590:intron
CAGGCATATGTATTCTCTTC+AGG 0.280229 tig0029094:+3324 Msa1440590:intron
TCCTTCAAATGACCATATTT+AGG 0.289683 tig0029094:-3147 None:intergenic
TCAAGACCATGAAGCAAAAT+TGG 0.291254 tig0029094:-4477 None:intergenic
GGAAGAGCACTTGGAGCTTC+TGG 0.302471 tig0029094:+2227 Msa1440590:CDS
AATCACAGCTTCTAGACTTC+TGG 0.310113 tig0029094:+3689 Msa1440590:CDS
CTGGTCATGCATACTCAAAC+TGG 0.311005 tig0029094:+2246 Msa1440590:CDS
CAAGAGTAACCTTCAATAAT+AGG 0.311719 tig0029094:+3394 Msa1440590:CDS
TTATTGATACTTATGTGTTT+TGG 0.314153 tig0029094:+1425 Msa1440590:CDS
TTAGGCTTGTATGGTTTATT+GGG 0.316421 tig0029094:-2594 None:intergenic
GTTGTATTAGTCATTAAATT+TGG 0.316432 tig0029094:-5281 None:intergenic
CGAGATCCTGCACTGGTCGC+TGG 0.327311 tig0029094:-2789 None:intergenic
GGCTAACTCACCACTGGATC+TGG 0.328635 tig0029094:-2335 None:intergenic
GACAGAAGTTTCACATTTAA+CGG 0.332873 tig0029094:+4259 Msa1440590:CDS
GATCCTACTGTTACATCATT+AGG 0.334094 tig0029094:+3216 Msa1440590:CDS
TATACTTCAGGGGTGCTTCT+TGG 0.336445 tig0029094:-1271 None:intergenic
TAGAATTGCTAGGCAACATT+TGG 0.341066 tig0029094:-3608 None:intergenic
TTGTAGATTGAGAATGAGTA+TGG 0.341574 tig0029094:+2197 Msa1440590:intron
GTTTGGTTGAAGTATGTTCC+TGG 0.342045 tig0029094:+1814 Msa1440590:CDS
TACTCATGCAATTATTTAGT+TGG 0.353458 tig0029094:+5580 Msa1440590:three_prime_UTR
GTCCATAGTTTAGGCTTGTA+TGG 0.356806 tig0029094:-2603 None:intergenic
GGCATTGGACATGAGCAGTA+TGG 0.356871 tig0029094:+4896 Msa1440590:CDS
CACTAACCATATTCATCAAT+TGG 0.357740 tig0029094:-3034 None:intergenic
AAATTTGGTTTACTAGATCT+TGG 0.359025 tig0029094:-5266 None:intergenic
CTTTATGTACATCTTAGAAT+TGG 0.367311 tig0029094:+1653 Msa1440590:CDS
TTGTTAAGAGAACCTAAATA+TGG 0.367945 tig0029094:+3135 Msa1440590:CDS
GACAAAGCATAGGAAGATAT+TGG 0.368369 tig0029094:+4943 Msa1440590:CDS
CAAGCAATGTGAACATGCTT+TGG 0.368637 tig0029094:+3185 Msa1440590:CDS
TAAGTATCCTCCCTGATTGT+AGG 0.369275 tig0029094:+3442 Msa1440590:CDS
TGTGTAGAGGATTTCCTGTT+TGG 0.373160 tig0029094:+1797 Msa1440590:intron
GATGCTCCAATTGATGAATA+TGG 0.376118 tig0029094:+3028 Msa1440590:CDS
AACCATACAAGCCTAAACTA+TGG 0.381218 tig0029094:+2601 Msa1440590:CDS
ACTAATTTCGGACGATCGGC+TGG 0.381654 tig0029094:+2974 Msa1440590:CDS
AATACATCTGTCCTACAATC+AGG 0.390545 tig0029094:-3453 None:intergenic
AGCAAACTATCATTCGAATT+CGG 0.392194 tig0029094:+3368 Msa1440590:CDS
AAGAATTAGGAGGGAATCCT+TGG 0.392838 tig0029094:+5210 Msa1440590:CDS
ACAATCAGGGAGGATACTTA+TGG 0.396888 tig0029094:-3439 None:intergenic
GATTAGGTACAGGTGTCCCT+TGG 0.398070 tig0029094:+2288 Msa1440590:CDS
ATCAGTTTCAGAACAGATAA+TGG 0.399070 tig0029094:+1838 Msa1440590:CDS
AGTTGCTCGTTTCATACAAA+AGG 0.399519 tig0029094:+2819 Msa1440590:CDS
GAGATACTAGTGACTATCTA+TGG 0.403562 tig0029094:+3730 Msa1440590:CDS
GCAATTCTAAGTTGTTATCA+TGG 0.405026 tig0029094:+3622 Msa1440590:CDS
CATGCAATTATTTAGTTGGT+TGG 0.405645 tig0029094:+5584 Msa1440590:three_prime_UTR
CTCCAAGTGCTCTTCCTTGT+GGG 0.408569 tig0029094:-2220 None:intergenic
GTATGGGAAAGGGTCAAGTA+TGG 0.409540 tig0029094:+4913 Msa1440590:CDS
GAGATCCTGCACTGGTCGCT+GGG 0.413012 tig0029094:-2788 None:intergenic
ACTACCATCAAGTTGTTTGT+TGG 0.414792 tig0029094:-5182 None:intergenic
TTCTTTAATTATTACATGGT+TGG 0.417245 tig0029094:+2850 Msa1440590:CDS
TACCACGGAGGAACTAATTT+CGG 0.421462 tig0029094:+2962 Msa1440590:CDS
GTCATAGTGCCTATTATTGA+AGG 0.422552 tig0029094:-3403 None:intergenic
AAAACCAGCCACAGTTGAAA+TGG 0.423005 tig0029094:+4745 Msa1440590:CDS
CAGAGATGAGGATTCTCCTT+TGG 0.426691 tig0029094:-1234 None:intergenic
TTATTACATGGTTGGTTACC+TGG 0.428977 tig0029094:+2858 Msa1440590:CDS
TATTGGATGGTTTATGCAAA+GGG 0.430224 tig0029094:+4960 Msa1440590:CDS
GTTTGTGCTGAGTGGAACTT+TGG 0.434468 tig0029094:+1683 Msa1440590:CDS
GAATCCTTGGAAAATATCTC+TGG 0.443768 tig0029094:+5223 Msa1440590:CDS
ATGGAGTCTCATCTGTTGAT+TGG 0.444222 tig0029094:+4700 Msa1440590:CDS
ATATATATCTGCATAATTGT+TGG 0.444889 tig0029094:+5622 Msa1440590:three_prime_UTR
TGTGCCATTTCAACTGTGGC+TGG 0.453005 tig0029094:-4749 None:intergenic
CTGTCAAATCCTTCTGTCCA+TGG 0.453029 tig0029094:-4500 None:intergenic
GGCACTATGACTTGCCTCCT+TGG 0.459047 tig0029094:+3415 Msa1440590:CDS
CATGACTCAGTCCATAGTTT+AGG 0.461041 tig0029094:-2612 None:intergenic
ATTGCTTGATAGCTTTATGA+AGG 0.461553 tig0029094:-3170 None:intergenic
CGAAGATACATCTTCATCAT+AGG 0.461768 tig0029094:-3649 None:intergenic
GCACTTCTTAGTGTAGCTGT+TGG 0.465181 tig0029094:+4316 Msa1440590:CDS
GGAACATACTTCAACCAAAC+AGG 0.465558 tig0029094:-1811 None:intergenic
TTCCAGAATAATACATTGCC+AGG 0.466558 tig0029094:-1466 None:intergenic
AGCATTAGTGTGCATTCCTC+TGG 0.470893 tig0029094:+3958 Msa1440590:CDS
GCCAATGGTTCAACTCCATC+AGG 0.472547 tig0029094:-4876 None:intergenic
AAAACCAACAAACAACTTGA+TGG 0.473330 tig0029094:+5178 Msa1440590:CDS
ATTAGGTACAGGTGTCCCTT+GGG 0.473811 tig0029094:+2289 Msa1440590:CDS
AGAAAAGCTATTATCATCAA+TGG 0.476920 tig0029094:+1211 Msa1440590:CDS
GAATAGTAACAGAAGAAGCT+TGG 0.477596 tig0029094:-1134 None:intergenic
GGAAAATATCTCTGGTAAAG+AGG 0.478631 tig0029094:+5231 Msa1440590:CDS
AATGTTCATGAACCTTCTCC+TGG 0.479007 tig0029094:+1448 Msa1440590:CDS
ATCATTAGGAGCATATGAAC+AGG 0.480489 tig0029094:+3230 Msa1440590:CDS
GAATTCTATATAGTTTCCAT+TGG 0.484396 tig0029094:+5395 Msa1440590:three_prime_UTR
GCTCCAAGTGCTCTTCCTTG+TGG 0.484823 tig0029094:-2221 None:intergenic
AAGAAGCTTGGAAACTGAGT+TGG 0.489457 tig0029094:-1122 None:intergenic
CAAAGGAGAATCCTCATCTC+TGG 0.492293 tig0029094:+1235 Msa1440590:CDS
GCTAACTCACCACTGGATCT+GGG 0.494475 tig0029094:-2334 None:intergenic
GCGAAATGCCAAGTTGGTTG+TGG 0.495089 tig0029094:+5023 Msa1440590:CDS
TGGAGTCTCATCTGTTGATT+GGG 0.497847 tig0029094:+4701 Msa1440590:CDS
TTCATTCTTTAATTATTACA+TGG 0.500991 tig0029094:+2846 Msa1440590:CDS
CATGGACAGAAGGATTTGAC+AGG 0.501539 tig0029094:+4501 Msa1440590:CDS
TTCCACTCAGCACAAACATA+AGG 0.505669 tig0029094:-1677 None:intergenic
TGCAATTCTTGCAACTATGC+CGG 0.505723 tig0029094:+4987 Msa1440590:CDS
ACACAAACAGGTTGGCCTAA+AGG 0.509211 tig0029094:+4650 Msa1440590:intron
GTTCCAGCACGTAGGTCGAT+AGG 0.511189 tig0029094:-4283 None:intergenic
CTGATTCAGAAAGCAAAAGA+TGG 0.512055 tig0029094:+1391 Msa1440590:CDS
GCTGTCCATGTGTTTATCAA+TGG 0.515626 tig0029094:+3985 Msa1440590:CDS
ACAAACAGGTTGGCCTAAAG+GGG 0.515899 tig0029094:+4652 Msa1440590:intron
TTTGTGCTGAGTGGAACTTT+GGG 0.518987 tig0029094:+1684 Msa1440590:CDS
GGCCCTATCGACCTACGTGC+TGG 0.519091 tig0029094:+4280 Msa1440590:CDS
TTTGGTTGAAGTATGTTCCT+GGG 0.520726 tig0029094:+1815 Msa1440590:CDS
GGTACCATGTTCCAAGGTCC+TGG 0.521759 tig0029094:+5153 Msa1440590:intron
CAGAATCATTTCTTCGTGGA+AGG 0.526155 tig0029094:+3926 Msa1440590:CDS
AAGGGTCAAGTATGGATCAA+TGG 0.526204 tig0029094:+4921 Msa1440590:CDS
GGCCCACAAGGAAGAGCACT+TGG 0.526726 tig0029094:+2218 Msa1440590:CDS
ATGAATTTGGTGTCTCCCAA+TGG 0.527375 tig0029094:+4681 Msa1440590:CDS
TGTCCCTTGGGTGATGTGTA+AGG 0.528527 tig0029094:+2301 Msa1440590:CDS
GGTGCTTCTTGGATAATGAA+TGG 0.528944 tig0029094:-1260 None:intergenic
CTGTCCATGTGTTTATCAAT+GGG 0.530690 tig0029094:+3986 Msa1440590:CDS
TCATAGCTTGTAGTTATGAA+TGG 0.530733 tig0029094:-3001 None:intergenic
CTATGCCGGAACTTATCGTC+AGG 0.531405 tig0029094:+5001 Msa1440590:CDS
CAATTCTAAGTTGTTATCAT+GGG 0.532316 tig0029094:+3623 Msa1440590:CDS
TTTCGCCTGACGATAAGTTC+CGG 0.532860 tig0029094:-5006 None:intergenic
ACCTAAATATGGTCATTTGA+AGG 0.533113 tig0029094:+3146 Msa1440590:CDS
ATGGCTGTTGGATTAGGTAC+AGG 0.534625 tig0029094:+2278 Msa1440590:CDS
TGGAGTTGAACCATTGGCAT+TGG 0.539466 tig0029094:+4881 Msa1440590:CDS
CTACAGATAAATGCTTGCAA+TGG 0.542639 tig0029094:+2549 Msa1440590:intron
GGACATGAGCAGTATGGGAA+AGG 0.544160 tig0029094:+4902 Msa1440590:CDS
AGAATAAATTAATAAGAACT+TGG 0.544222 tig0029094:-5448 None:intergenic
GCATTGGACATGAGCAGTAT+GGG 0.544484 tig0029094:+4897 Msa1440590:CDS
TCATGGAAGTCAGGAATCAC+AGG 0.550670 tig0029094:+4453 Msa1440590:CDS
GGCAACATTTGGATTTGTGA+AGG 0.551117 tig0029094:-3597 None:intergenic
ATCAACAGATGAGACTCCAT+TGG 0.551457 tig0029094:-4697 None:intergenic
GAGGAATGCACACTAATGCT+TGG 0.552794 tig0029094:-3955 None:intergenic
GTTGCTCGTTTCATACAAAA+GGG 0.552827 tig0029094:+2820 Msa1440590:CDS
AATAATACATTGCCAGGAGA+AGG 0.553523 tig0029094:-1460 None:intergenic
GCACATTTCAATGCACCTGA+TGG 0.556406 tig0029094:+4861 Msa1440590:CDS
CGTCAGGCGAAATGCCAAGT+TGG 0.557079 tig0029094:+5017 Msa1440590:CDS
TCAACAGATGAGACTCCATT+GGG 0.557160 tig0029094:-4696 None:intergenic
TGGTCTTGACCATGGACAGA+AGG 0.557257 tig0029094:+4491 Msa1440590:CDS
ATATTGGATGGTTTATGCAA+AGG 0.557748 tig0029094:+4959 Msa1440590:CDS
TAGGCTGTCCACAACCAACT+TGG 0.558476 tig0029094:-5031 None:intergenic
GTTTGCTAGAAAAGCTGCAC+AGG 0.559158 tig0029094:-3352 None:intergenic
TTCCAGCACGTAGGTCGATA+GGG 0.563878 tig0029094:-4282 None:intergenic
TATCAATCATGCTATGCCAA+TGG 0.564435 tig0029094:-5411 None:intergenic
AATTAGTACCATCTTTGAGT+AGG 0.565328 tig0029094:-5050 None:intergenic
TCATCAGAATCATTTCTTCG+TGG 0.567472 tig0029094:+3922 Msa1440590:CDS
GACATGAGCAGTATGGGAAA+GGG 0.570823 tig0029094:+4903 Msa1440590:CDS
TTGCTTCATGGTCTTGACCA+TGG 0.573358 tig0029094:+4483 Msa1440590:CDS
TTTGCAGGTACCATGTTCCA+AGG 0.574539 tig0029094:+5147 Msa1440590:intron
GAAAGCAAAAGATGGAGGGT+TGG 0.574643 tig0029094:+1399 Msa1440590:CDS
GATAACAACTTAGAATTGCT+AGG 0.576031 tig0029094:-3618 None:intergenic
ATTATTAACAACATTGTCGT+AGG 0.577085 tig0029094:+942 Msa1440590:five_prime_UTR
GTTCTGTTATCTCTGTGAGT+GGG 0.586337 tig0029094:-996 None:intergenic
ACCTTGTGCCATTTCAACTG+TGG 0.587399 tig0029094:-4753 None:intergenic
AGATCCTGCACTGGTCGCTG+GGG 0.591214 tig0029094:-2787 None:intergenic
GATCCTGCACTGGTCGCTGG+GGG 0.592080 tig0029094:-2786 None:intergenic
CTAAACTATGGACTGAGTCA+TGG 0.593403 tig0029094:+2613 Msa1440590:CDS
CTGCTCATGTCCAATGCCAA+TGG 0.594494 tig0029094:-4891 None:intergenic
TCTGTTCTGAAACTGATCCC+AGG 0.600350 tig0029094:-1832 None:intergenic
TGTTCTGTTATCTCTGTGAG+TGG 0.603781 tig0029094:-997 None:intergenic
TGGATCAATGGACAAAGCAT+AGG 0.604928 tig0029094:+4933 Msa1440590:CDS
ATACATCTGTCCTACAATCA+GGG 0.605634 tig0029094:-3452 None:intergenic
TTAACCAGGACCTTGGAACA+TGG 0.606779 tig0029094:-5157 None:intergenic
GCTCCTAATGATGTAACAGT+AGG 0.606807 tig0029094:-3219 None:intergenic
ACCTGATGGAGTTGAACCAT+TGG 0.609035 tig0029094:+4875 Msa1440590:CDS
AAGCATAGGAAGATATTGGA+TGG 0.609264 tig0029094:+4947 Msa1440590:CDS
GAGAATGAGTATGGCCCACA+AGG 0.610168 tig0029094:+2206 Msa1440590:CDS
GACCTTATGTTTGTGCTGAG+TGG 0.610645 tig0029094:+1675 Msa1440590:CDS
ATTTCCCATTGATAAACACA+TGG 0.611686 tig0029094:-3990 None:intergenic
AGGAACTAATTTCGGACGAT+CGG 0.614751 tig0029094:+2970 Msa1440590:CDS
TTCAGAAAGCAAAAGATGGA+GGG 0.615815 tig0029094:+1395 Msa1440590:CDS
GTGGACAGCCTACTCAAAGA+TGG 0.615918 tig0029094:+5042 Msa1440590:CDS
GCGAACGCGAGATCCTGCAC+TGG 0.618153 tig0029094:-2796 None:intergenic
GGACTGAGTCATGGAGTGGT+TGG 0.618267 tig0029094:+2622 Msa1440590:CDS
ATTCAGAAAGCAAAAGATGG+AGG 0.619685 tig0029094:+1394 Msa1440590:CDS
TGGTCATGCATACTCAAACT+GGG 0.624854 tig0029094:+2247 Msa1440590:CDS
AATTTCGGACGATCGGCTGG+AGG 0.627314 tig0029094:+2977 Msa1440590:CDS
TCTTCCTTACACATCACCCA+AGG 0.629739 tig0029094:-2305 None:intergenic
AGATGATGCCCCAGATCCAG+TGG 0.631725 tig0029094:+2325 Msa1440590:CDS
CTAACTCACCACTGGATCTG+GGG 0.639843 tig0029094:-2333 None:intergenic
GCTCGTTTCATACAAAAGGG+TGG 0.641579 tig0029094:+2823 Msa1440590:CDS
ATTGACTTGGCATCAAACAA+AGG 0.645701 tig0029094:+5328 Msa1440590:three_prime_UTR
ACTATCTATGGTATATAACC+AGG 0.648277 tig0029094:+3742 Msa1440590:CDS
AATGAATGGAACCAGAGATG+AGG 0.654785 tig0029094:-1246 None:intergenic
CTATTATCATCAATGGCCAA+AGG 0.665404 tig0029094:+1218 Msa1440590:CDS
GAAAAGCTGTTTCAGTCACA+AGG 0.669396 tig0029094:+2023 Msa1440590:CDS
CTTCCTTACACATCACCCAA+GGG 0.670888 tig0029094:-2304 None:intergenic
CAAACAGGTTGGCCTAAAGG+GGG 0.672533 tig0029094:+4653 Msa1440590:intron
TAGTATAGTATATACTTCAG+GGG 0.680900 tig0029094:-1281 None:intergenic
GGGAGGATACTTATGGACCA+AGG 0.681332 tig0029094:-3432 None:intergenic
TGAAGATGTATCTTCGCTAG+CGG 0.687691 tig0029094:+3656 Msa1440590:CDS
CACATGGACAGCATCACCAG+AGG 0.689285 tig0029094:-3974 None:intergenic
GCCACAGTTGAAATGGCACA+AGG 0.694536 tig0029094:+4752 Msa1440590:CDS
GTCCGAAATTAGTTCCTCCG+TGG 0.697646 tig0029094:-2964 None:intergenic
CATAGCATGATTGATACGAG+AGG 0.704572 tig0029094:+5418 Msa1440590:three_prime_UTR
CTATGGACTGAGTCATGGAG+TGG 0.709849 tig0029094:+2618 Msa1440590:CDS
AAGCTGTTTCAGTCACAAGG+TGG 0.718827 tig0029094:+2026 Msa1440590:CDS
AATGACAAATGATAGTACCA+CGG 0.725388 tig0029094:+2947 Msa1440590:intron
ATGGACAGAAGGATTTGACA+GGG 0.731802 tig0029094:+4502 Msa1440590:CDS
GAAATGTGTGTAGATGTGGG+AGG 0.739680 tig0029094:+1366 Msa1440590:intron
AGGATACTTATGGACCAAGG+AGG 0.747272 tig0029094:-3429 None:intergenic
CATCTGTCCTACAATCAGGG+AGG 0.749201 tig0029094:-3449 None:intergenic
GACAAATGATAGTACCACGG+AGG 0.759475 tig0029094:+2950 Msa1440590:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AACTTCAAACATTTATTATT+TGG + tig0029094:1718-1737 Msa1440590:intron 15.0%
!!! CTTTTGAAAAAAAAACTTTT+AGG + tig0029094:1953-1972 Msa1440590:intron 15.0%
!! TTCATTCTTTAATTATTACA+TGG + tig0029094:2846-2865 Msa1440590:CDS 15.0%
!! TATTAATGAATTGATTGTTA+TGG + tig0029094:3552-3571 Msa1440590:intron 15.0%
!! AACTTTATTCTTCATAATTA+TGG - tig0029094:5356-5375 None:intergenic 15.0%
!! AGAATAAATTAATAAGAACT+TGG - tig0029094:5451-5470 None:intergenic 15.0%
!! ATAGTATAGTATATACTTCA+GGG - tig0029094:1285-1304 None:intergenic 20.0%
!! AATAGTATAGTATATACTTC+AGG - tig0029094:1286-1305 None:intergenic 20.0%
!!! TTATTGATACTTATGTGTTT+TGG + tig0029094:1425-1444 Msa1440590:CDS 20.0%
!! AATTACAAATCAACCTTAAA+AGG - tig0029094:1865-1884 None:intergenic 20.0%
!! TTATGTAGTTAATTCTTGAA+TGG + tig0029094:1900-1919 Msa1440590:intron 20.0%
!! ATTTAGATTAACAATGAGTT+TGG - tig0029094:2479-2498 None:intergenic 20.0%
!! ACTCTATTATCTTAACTAAA+AGG - tig0029094:2509-2528 None:intergenic 20.0%
!! ATTTATCTGTAGGAAAAAAT+TGG - tig0029094:2541-2560 None:intergenic 20.0%
!! ACAACTAACTTCATAAATAA+TGG - tig0029094:2661-2680 None:intergenic 20.0%
!! TTCTTTAATTATTACATGGT+TGG + tig0029094:2850-2869 Msa1440590:CDS 20.0%
!! CTAAAGTAATGACTATATTT+AGG - tig0029094:3081-3100 None:intergenic 20.0%
!!! TTGGTATTTTTAAATCTAGA+GGG - tig0029094:3779-3798 None:intergenic 20.0%
!! ATTTAAAAATACCAAGCTAT+TGG + tig0029094:3784-3803 Msa1440590:intron 20.0%
!! ATAATTCGGTTAAAATTAGT+TGG + tig0029094:4044-4063 Msa1440590:intron 20.0%
!!! TCTTTTTTTTCATAGAATAG+TGG + tig0029094:4417-4436 Msa1440590:intron 20.0%
!! AATTATGTATATACACAAAC+AGG + tig0029094:4638-4657 Msa1440590:intron 20.0%
!! GTTGTATTAGTCATTAAATT+TGG - tig0029094:5284-5303 None:intergenic 20.0%
!! ATATATATCTGCATAATTGT+TGG + tig0029094:5622-5641 Msa1440590:three_prime_UTR 20.0%
! ATTATTAACAACATTGTCGT+AGG + tig0029094:942-961 Msa1440590:five_prime_UTR 25.0%
! AGAAAAGCTATTATCATCAA+TGG + tig0029094:1211-1230 Msa1440590:CDS 25.0%
! TAGTATAGTATATACTTCAG+GGG - tig0029094:1284-1303 None:intergenic 25.0%
! CTTTATGTACATCTTAGAAT+TGG + tig0029094:1653-1672 Msa1440590:CDS 25.0%
!!! GTTTTTTTATTTGTGTGTAG+AGG + tig0029094:1784-1803 Msa1440590:intron 25.0%
! CTTACTTGTGAAAGAATTAT+TGG - tig0029094:2053-2072 None:intergenic 25.0%
! TTGTTAAGAGAACCTAAATA+TGG + tig0029094:3135-3154 Msa1440590:CDS 25.0%
!!! CAGTGTTTTAGAAGTTATTT+CGG - tig0029094:3273-3292 None:intergenic 25.0%
! CAATTCTAAGTTGTTATCAT+GGG + tig0029094:3623-3642 Msa1440590:CDS 25.0%
!!! CTTGGTATTTTTAAATCTAG+AGG - tig0029094:3780-3799 None:intergenic 25.0%
!! AGTTGAAATCTTACTGTTTT+TGG + tig0029094:3871-3890 Msa1440590:intron 25.0%
!!! GTTGAAATCTTACTGTTTTT+GGG + tig0029094:3872-3891 Msa1440590:intron 25.0%
!! TTTATCAATGGGAAATTTTC+AGG + tig0029094:3997-4016 Msa1440590:CDS 25.0%
! TAAACCAAGATGAGATAATT+CGG + tig0029094:4030-4049 Msa1440590:intron 25.0%
! CATAAAATGTATCTTAGACT+CGG + tig0029094:4149-4168 Msa1440590:intron 25.0%
! AGAGATGATAAAATTCAAGT+TGG - tig0029094:4370-4389 None:intergenic 25.0%
! TGCTATATTACTATTGCATA+AGG + tig0029094:4601-4620 Msa1440590:intron 25.0%
!! TAATCTAATTTGAAACCTTC+AGG + tig0029094:4839-4858 Msa1440590:intron 25.0%
! AACATTACTTCCTTATCTTT+AGG + tig0029094:5094-5113 Msa1440590:intron 25.0%
!! ACTTATTACTTCAATTTTGC+AGG + tig0029094:5132-5151 Msa1440590:intron 25.0%
!!! ATGGTAGTTTTTGAAGAATT+AGG + tig0029094:5197-5216 Msa1440590:CDS 25.0%
!!! TAGTTTTTGAAGAATTAGGA+GGG + tig0029094:5201-5220 Msa1440590:CDS 25.0%
!! AAATTTGGTTTACTAGATCT+TGG - tig0029094:5269-5288 None:intergenic 25.0%
! GAATTCTATATAGTTTCCAT+TGG + tig0029094:5395-5414 Msa1440590:three_prime_UTR 25.0%
! TGAGTGTCAATGTATTTATT+TGG + tig0029094:5478-5497 Msa1440590:three_prime_UTR 25.0%
! TACTCATGCAATTATTTAGT+TGG + tig0029094:5580-5599 Msa1440590:three_prime_UTR 25.0%
!!! TAGCTTTTTTCTACAATGGA+GGG - tig0029094:1096-1115 None:intergenic 30.0%
!!! ATAGCTTTTTTCTACAATGG+AGG - tig0029094:1097-1116 None:intergenic 30.0%
TCCATTGTAGAAAAAAGCTA+TGG + tig0029094:1096-1115 Msa1440590:exon 30.0%
!!! TCCATAGCTTTTTTCTACAA+TGG - tig0029094:1100-1119 None:intergenic 30.0%
TTCTTCTCTATCTTCTTTCT+TGG + tig0029094:1154-1173 Msa1440590:CDS 30.0%
! TTTGAAATGTGTGTAGATGT+GGG + tig0029094:1363-1382 Msa1440590:intron 30.0%
!! CAATGTATTATTCTGGAATC+TGG + tig0029094:1471-1490 Msa1440590:intron 30.0%
ATTAAGACAGTGCAGAAAAA+AGG + tig0029094:1629-1648 Msa1440590:CDS 30.0%
ATCAGTTTCAGAACAGATAA+TGG + tig0029094:1838-1857 Msa1440590:CDS 30.0%
!! AACAGATAATGGTCCTTTTA+AGG + tig0029094:1849-1868 Msa1440590:CDS 30.0%
TTGTAGATTGAGAATGAGTA+TGG + tig0029094:2197-2216 Msa1440590:intron 30.0%
TTCCAAATTTGCACTAAATC+AGG - tig0029094:2375-2394 None:intergenic 30.0%
! TTAGTGCAAATTTGGAATGA+CGG + tig0029094:2378-2397 Msa1440590:intron 30.0%
! AACTTTTGCTAAAATCACAG+TGG + tig0029094:2438-2457 Msa1440590:intron 30.0%
TTAGGCTTGTATGGTTTATT+GGG - tig0029094:2597-2616 None:intergenic 30.0%
TTTAGGCTTGTATGGTTTAT+TGG - tig0029094:2598-2617 None:intergenic 30.0%
GAAGTTAGTTGTGAAAACAA+TGG + tig0029094:2669-2688 Msa1440590:intron 30.0%
AATGACAAATGATAGTACCA+CGG + tig0029094:2947-2966 Msa1440590:intron 30.0%
! TCATAGCTTGTAGTTATGAA+TGG - tig0029094:3004-3023 None:intergenic 30.0%
CACTAACCATATTCATCAAT+TGG - tig0029094:3037-3056 None:intergenic 30.0%
ACCTAAATATGGTCATTTGA+AGG + tig0029094:3146-3165 Msa1440590:CDS 30.0%
TCCTTCAAATGACCATATTT+AGG - tig0029094:3150-3169 None:intergenic 30.0%
!! ATTGCTTGATAGCTTTATGA+AGG - tig0029094:3173-3192 None:intergenic 30.0%
!!! TGTTTTAGAAGTTATTTCGG+AGG - tig0029094:3270-3289 None:intergenic 30.0%
TAACAATGATCTATGTTTCC+AGG + tig0029094:3305-3324 Msa1440590:intron 30.0%
AGCAAACTATCATTCGAATT+CGG + tig0029094:3368-3387 Msa1440590:CDS 30.0%
CAAGAGTAACCTTCAATAAT+AGG + tig0029094:3394-3413 Msa1440590:CDS 30.0%
ACTGCAAGAGTAAGAATAAA+AGG + tig0029094:3480-3499 Msa1440590:intron 30.0%
CTGCAAGAGTAAGAATAAAA+GGG + tig0029094:3481-3500 Msa1440590:intron 30.0%
GATAACAACTTAGAATTGCT+AGG - tig0029094:3621-3640 None:intergenic 30.0%
GCAATTCTAAGTTGTTATCA+TGG + tig0029094:3622-3641 Msa1440590:CDS 30.0%
ACTATCTATGGTATATAACC+AGG + tig0029094:3742-3761 Msa1440590:CDS 30.0%
ATTTCCCATTGATAAACACA+TGG - tig0029094:3993-4012 None:intergenic 30.0%
TTAACCGAATTATCTCATCT+TGG - tig0029094:4037-4056 None:intergenic 30.0%
TTTAGGTAGTAGATAGAAGT+TGG + tig0029094:4074-4093 Msa1440590:intron 30.0%
GACAGAAGTTTCACATTTAA+CGG + tig0029094:4259-4278 Msa1440590:CDS 30.0%
GTAATAAGCAAGATACTAAC+AGG - tig0029094:4346-4365 None:intergenic 30.0%
TCGTTAAATAGTTGCTATAG+CGG + tig0029094:4578-4597 Msa1440590:intron 30.0%
ATGTATATACACAAACAGGT+TGG + tig0029094:4642-4661 Msa1440590:intron 30.0%
ATATTGGATGGTTTATGCAA+AGG + tig0029094:4959-4978 Msa1440590:CDS 30.0%
TATTGGATGGTTTATGCAAA+GGG + tig0029094:4960-4979 Msa1440590:CDS 30.0%
AATTAGTACCATCTTTGAGT+AGG - tig0029094:5053-5072 None:intergenic 30.0%
! GTAGCATTTTCCTAAAGATA+AGG - tig0029094:5107-5126 None:intergenic 30.0%
AAAACCAACAAACAACTTGA+TGG + tig0029094:5178-5197 Msa1440590:CDS 30.0%
!! GTAGTTTTTGAAGAATTAGG+AGG + tig0029094:5200-5219 Msa1440590:CDS 30.0%
! TTTACCAGAGATATTTTCCA+AGG - tig0029094:5230-5249 None:intergenic 30.0%
CACAAGTATGAGAACAAAAA+TGG + tig0029094:5303-5322 Msa1440590:exon 30.0%
AACAAAAATGGTGATTGACT+TGG + tig0029094:5315-5334 Msa1440590:three_prime_UTR 30.0%
!!! GTTTTTTATATATGCAGCTG+TGG + tig0029094:5373-5392 Msa1440590:three_prime_UTR 30.0%
CATGCAATTATTTAGTTGGT+TGG + tig0029094:5584-5603 Msa1440590:three_prime_UTR 30.0%
!! TGGAGGGAAAGTTTTTGAAA+TGG - tig0029094:1080-1099 None:intergenic 35.0%
GAATAGTAACAGAAGAAGCT+TGG - tig0029094:1137-1156 None:intergenic 35.0%
CTATTATCATCAATGGCCAA+AGG + tig0029094:1218-1237 Msa1440590:CDS 35.0%
! GTTTGAAATGTGTGTAGATG+TGG + tig0029094:1362-1381 Msa1440590:intron 35.0%
CTGATTCAGAAAGCAAAAGA+TGG + tig0029094:1391-1410 Msa1440590:CDS 35.0%
ATTCAGAAAGCAAAAGATGG+AGG + tig0029094:1394-1413 Msa1440590:CDS 35.0%
TTCAGAAAGCAAAAGATGGA+GGG + tig0029094:1395-1414 Msa1440590:CDS 35.0%
AATAATACATTGCCAGGAGA+AGG - tig0029094:1463-1482 None:intergenic 35.0%
TTCCAGAATAATACATTGCC+AGG - tig0029094:1469-1488 None:intergenic 35.0%
! GTGTTGCAGTACAATTTTGA+AGG + tig0029094:1584-1603 Msa1440590:intron 35.0%
!! TGCAGTACAATTTTGAAGGA+AGG + tig0029094:1588-1607 Msa1440590:intron 35.0%
TTTGGTTGAAGTATGTTCCT+GGG + tig0029094:1815-1834 Msa1440590:CDS 35.0%
TGTGAAAGATCAAGAAAGAG+TGG + tig0029094:2126-2145 Msa1440590:intron 35.0%
TGCCTGATTTAGTGCAAATT+TGG + tig0029094:2370-2389 Msa1440590:intron 35.0%
CATTGCAAGCATTTATCTGT+AGG - tig0029094:2551-2570 None:intergenic 35.0%
CTACAGATAAATGCTTGCAA+TGG + tig0029094:2549-2568 Msa1440590:intron 35.0%
AACCATACAAGCCTAAACTA+TGG + tig0029094:2601-2620 Msa1440590:CDS 35.0%
AGGAGAAAAGAAGAGCAAAA+GGG - tig0029094:2717-2736 None:intergenic 35.0%
AAGGAGAAAAGAAGAGCAAA+AGG - tig0029094:2718-2737 None:intergenic 35.0%
TGAAAACCTGATGACCAAAT+GGG - tig0029094:2749-2768 None:intergenic 35.0%
! GTCATCAGGTTTTCAGAATT+TGG + tig0029094:2754-2773 Msa1440590:intron 35.0%
! ATCAGGTTTTCAGAATTTGG+TGG + tig0029094:2757-2776 Msa1440590:intron 35.0%
AGTTGCTCGTTTCATACAAA+AGG + tig0029094:2819-2838 Msa1440590:CDS 35.0%
GTTGCTCGTTTCATACAAAA+GGG + tig0029094:2820-2839 Msa1440590:CDS 35.0%
! TTATTACATGGTTGGTTACC+TGG + tig0029094:2858-2877 Msa1440590:CDS 35.0%
!!! GTTACCTGGTTCTTTTTTCT+CGG + tig0029094:2872-2891 Msa1440590:intron 35.0%
TTAACCGAGAAAAAAGAACC+AGG - tig0029094:2879-2898 None:intergenic 35.0%
GATGCTCCAATTGATGAATA+TGG + tig0029094:3028-3047 Msa1440590:CDS 35.0%
GATCCTACTGTTACATCATT+AGG + tig0029094:3216-3235 Msa1440590:CDS 35.0%
! ATCATTAGGAGCATATGAAC+AGG + tig0029094:3230-3249 Msa1440590:CDS 35.0%
GTCATAGTGCCTATTATTGA+AGG - tig0029094:3406-3425 None:intergenic 35.0%
ATACATCTGTCCTACAATCA+GGG - tig0029094:3455-3474 None:intergenic 35.0%
AATACATCTGTCCTACAATC+AGG - tig0029094:3456-3475 None:intergenic 35.0%
TAGAATTGCTAGGCAACATT+TGG - tig0029094:3611-3630 None:intergenic 35.0%
CGAAGATACATCTTCATCAT+AGG - tig0029094:3652-3671 None:intergenic 35.0%
GAGATACTAGTGACTATCTA+TGG + tig0029094:3730-3749 Msa1440590:CDS 35.0%
AAAGCAAGGAAAAAGCTAGA+CGG - tig0029094:3838-3857 None:intergenic 35.0%
TCATCAGAATCATTTCTTCG+TGG + tig0029094:3922-3941 Msa1440590:CDS 35.0%
CTGTCCATGTGTTTATCAAT+GGG + tig0029094:3986-4005 Msa1440590:CDS 35.0%
!!! AATTAGTTGGCGTTGGTTTT+AGG + tig0029094:4057-4076 Msa1440590:intron 35.0%
! AGATTCCTATTTCCTTTTGC+AGG + tig0029094:4214-4233 Msa1440590:intron 35.0%
! TTTTATTAGTTCCAGCACGT+AGG - tig0029094:4294-4313 None:intergenic 35.0%
! GTGGAATCCATTTTGAATCA+TGG + tig0029094:4436-4455 Msa1440590:CDS 35.0%
CTGACTTCCATGATTCAAAA+TGG - tig0029094:4446-4465 None:intergenic 35.0%
! CATTTTGAATCATGGAAGTC+AGG + tig0029094:4444-4463 Msa1440590:CDS 35.0%
TCAAGACCATGAAGCAAAAT+TGG - tig0029094:4480-4499 None:intergenic 35.0%
CACAAGGTAAGAAAAGTTAC+TGG + tig0029094:4768-4787 Msa1440590:intron 35.0%
GACAAAGCATAGGAAGATAT+TGG + tig0029094:4943-4962 Msa1440590:CDS 35.0%
AAGCATAGGAAGATATTGGA+TGG + tig0029094:4947-4966 Msa1440590:CDS 35.0%
!!! GTTGTTTGTTGGTTTTAACC+AGG - tig0029094:5174-5193 None:intergenic 35.0%
! ACTACCATCAAGTTGTTTGT+TGG - tig0029094:5185-5204 None:intergenic 35.0%
GAATCCTTGGAAAATATCTC+TGG + tig0029094:5223-5242 Msa1440590:CDS 35.0%
GGAAAATATCTCTGGTAAAG+AGG + tig0029094:5231-5250 Msa1440590:CDS 35.0%
!! ATTGACTTGGCATCAAACAA+AGG + tig0029094:5328-5347 Msa1440590:three_prime_UTR 35.0%
TATCAATCATGCTATGCCAA+TGG - tig0029094:5414-5433 None:intergenic 35.0%
GTTCTGTTATCTCTGTGAGT+GGG - tig0029094:999-1018 None:intergenic 40.0%
TGTTCTGTTATCTCTGTGAG+TGG - tig0029094:1000-1019 None:intergenic 40.0%
AAGAAGCTTGGAAACTGAGT+TGG - tig0029094:1125-1144 None:intergenic 40.0%
AATGAATGGAACCAGAGATG+AGG - tig0029094:1249-1268 None:intergenic 40.0%
GGTGCTTCTTGGATAATGAA+TGG - tig0029094:1263-1282 None:intergenic 40.0%
AATGTTCATGAACCTTCTCC+TGG + tig0029094:1448-1467 Msa1440590:CDS 40.0%
CTCCTGGCAATGTATTATTC+TGG + tig0029094:1464-1483 Msa1440590:intron 40.0%
TTCCACTCAGCACAAACATA+AGG - tig0029094:1680-1699 None:intergenic 40.0%
TTTGTGCTGAGTGGAACTTT+GGG + tig0029094:1684-1703 Msa1440590:CDS 40.0%
TGTGTAGAGGATTTCCTGTT+TGG + tig0029094:1797-1816 Msa1440590:intron 40.0%
GGAACATACTTCAACCAAAC+AGG - tig0029094:1814-1833 None:intergenic 40.0%
GTTTGGTTGAAGTATGTTCC+TGG + tig0029094:1814-1833 Msa1440590:CDS 40.0%
! AACTTTTAGGCTGCAATGCA+AGG + tig0029094:1966-1985 Msa1440590:intron 40.0%
! GAAAAGCTGTTTCAGTCACA+AGG + tig0029094:2023-2042 Msa1440590:CDS 40.0%
CTTGATCTTTCACAACATGC+AGG - tig0029094:2120-2139 None:intergenic 40.0%
TGGTCATGCATACTCAAACT+GGG + tig0029094:2247-2266 Msa1440590:CDS 40.0%
GCAAAAATGGCTGTTGGATT+AGG + tig0029094:2272-2291 Msa1440590:CDS 40.0%
CAATGAGTTTGGCTGAATCA+CGG - tig0029094:2468-2487 None:intergenic 40.0%
GTCCATAGTTTAGGCTTGTA+TGG - tig0029094:2606-2625 None:intergenic 40.0%
CATGACTCAGTCCATAGTTT+AGG - tig0029094:2615-2634 None:intergenic 40.0%
! CTAAACTATGGACTGAGTCA+TGG + tig0029094:2613-2632 Msa1440590:CDS 40.0%
! CTCCTTTTCCTATTCCCATT+TGG + tig0029094:2732-2751 Msa1440590:intron 40.0%
GACCAAATGGGAATAGGAAA+AGG - tig0029094:2737-2756 None:intergenic 40.0%
CTGAAAACCTGATGACCAAA+TGG - tig0029094:2750-2769 None:intergenic 40.0%
TACCACGGAGGAACTAATTT+CGG + tig0029094:2962-2981 Msa1440590:CDS 40.0%
AGGAACTAATTTCGGACGAT+CGG + tig0029094:2970-2989 Msa1440590:CDS 40.0%
! TCGAGTGCTTAACTGATTTC+AGG + tig0029094:3111-3130 Msa1440590:intron 40.0%
CAAGCAATGTGAACATGCTT+TGG + tig0029094:3185-3204 Msa1440590:CDS 40.0%
GCTCCTAATGATGTAACAGT+AGG - tig0029094:3222-3241 None:intergenic 40.0%
!! CTTCTAAAACACTGCGTTCA+TGG + tig0029094:3279-3298 Msa1440590:intron 40.0%
CTGAAGAGAATACATATGCC+TGG - tig0029094:3326-3345 None:intergenic 40.0%
CAGGCATATGTATTCTCTTC+AGG + tig0029094:3324-3343 Msa1440590:intron 40.0%
ACAATCAGGGAGGATACTTA+TGG - tig0029094:3442-3461 None:intergenic 40.0%
TAAGTATCCTCCCTGATTGT+AGG + tig0029094:3442-3461 Msa1440590:CDS 40.0%
GTTATGGTTTCGTGAAGATG+AGG + tig0029094:3568-3587 Msa1440590:intron 40.0%
GGCAACATTTGGATTTGTGA+AGG - tig0029094:3600-3619 None:intergenic 40.0%
TGAAGATGTATCTTCGCTAG+CGG + tig0029094:3656-3675 Msa1440590:CDS 40.0%
AATCACAGCTTCTAGACTTC+TGG + tig0029094:3689-3708 Msa1440590:CDS 40.0%
ACTAGAGAAAGCCAATAGCT+TGG - tig0029094:3798-3817 None:intergenic 40.0%
TGCATAGAACTGAGAAAGCA+AGG - tig0029094:3852-3871 None:intergenic 40.0%
CAGAATCATTTCTTCGTGGA+AGG + tig0029094:3926-3945 Msa1440590:CDS 40.0%
GCTGTCCATGTGTTTATCAA+TGG + tig0029094:3985-4004 Msa1440590:CDS 40.0%
CGGTTAAAATTAGTTGGCGT+TGG + tig0029094:4050-4069 Msa1440590:intron 40.0%
! ACAGGTCCAATTTTGCTTCA+TGG + tig0029094:4471-4490 Msa1440590:CDS 40.0%
ATGGACAGAAGGATTTGACA+GGG + tig0029094:4502-4521 Msa1440590:CDS 40.0%
AGGATTTGACAGGGCAAAAA+TGG + tig0029094:4511-4530 Msa1440590:CDS 40.0%
!! ATGAATTTGGTGTCTCCCAA+TGG + tig0029094:4681-4700 Msa1440590:CDS 40.0%
TCAACAGATGAGACTCCATT+GGG - tig0029094:4699-4718 None:intergenic 40.0%
ATCAACAGATGAGACTCCAT+TGG - tig0029094:4700-4719 None:intergenic 40.0%
ATGGAGTCTCATCTGTTGAT+TGG + tig0029094:4700-4719 Msa1440590:CDS 40.0%
! TGGAGTCTCATCTGTTGATT+GGG + tig0029094:4701-4720 Msa1440590:CDS 40.0%
AAAACCAGCCACAGTTGAAA+TGG + tig0029094:4745-4764 Msa1440590:CDS 40.0%
AAGGGTCAAGTATGGATCAA+TGG + tig0029094:4921-4940 Msa1440590:CDS 40.0%
TGGATCAATGGACAAAGCAT+AGG + tig0029094:4933-4952 Msa1440590:CDS 40.0%
TGCAATTCTTGCAACTATGC+CGG + tig0029094:4987-5006 Msa1440590:CDS 40.0%
AAGAATTAGGAGGGAATCCT+TGG + tig0029094:5210-5229 Msa1440590:CDS 40.0%
CATAGCATGATTGATACGAG+AGG + tig0029094:5418-5437 Msa1440590:three_prime_UTR 40.0%
CAGAGATGAGGATTCTCCTT+TGG - tig0029094:1237-1256 None:intergenic 45.0%
CAAAGGAGAATCCTCATCTC+TGG + tig0029094:1235-1254 Msa1440590:CDS 45.0%
!! TATACTTCAGGGGTGCTTCT+TGG - tig0029094:1274-1293 None:intergenic 45.0%
GAAATGTGTGTAGATGTGGG+AGG + tig0029094:1366-1385 Msa1440590:intron 45.0%
GAAAGCAAAAGATGGAGGGT+TGG + tig0029094:1399-1418 Msa1440590:CDS 45.0%
GACCTTATGTTTGTGCTGAG+TGG + tig0029094:1675-1694 Msa1440590:CDS 45.0%
GTTTGTGCTGAGTGGAACTT+TGG + tig0029094:1683-1702 Msa1440590:CDS 45.0%
!! TCTGTTCTGAAACTGATCCC+AGG - tig0029094:1835-1854 None:intergenic 45.0%
! AAGCTGTTTCAGTCACAAGG+TGG + tig0029094:2026-2045 Msa1440590:CDS 45.0%
CTGGTCATGCATACTCAAAC+TGG + tig0029094:2246-2265 Msa1440590:CDS 45.0%
CTCAAACTGGGCTGCAAAAA+TGG + tig0029094:2259-2278 Msa1440590:CDS 45.0%
! ATGGCTGTTGGATTAGGTAC+AGG + tig0029094:2278-2297 Msa1440590:CDS 45.0%
ATTAGGTACAGGTGTCCCTT+GGG + tig0029094:2289-2308 Msa1440590:CDS 45.0%
CTTCCTTACACATCACCCAA+GGG - tig0029094:2307-2326 None:intergenic 45.0%
TCTTCCTTACACATCACCCA+AGG - tig0029094:2308-2327 None:intergenic 45.0%
AATCAGGCAAGATCACGAGA+AGG - tig0029094:2359-2378 None:intergenic 45.0%
CCTGATGACCAAATGGGAAT+AGG - tig0029094:2743-2762 None:intergenic 45.0%
CCTATTCCCATTTGGTCATC+AGG + tig0029094:2740-2759 Msa1440590:intron 45.0%
GCTCGTTTCATACAAAAGGG+TGG + tig0029094:2823-2842 Msa1440590:CDS 45.0%
GACAAATGATAGTACCACGG+AGG + tig0029094:2950-2969 Msa1440590:intron 45.0%
! GTTTGCTAGAAAAGCTGCAC+AGG - tig0029094:3355-3374 None:intergenic 45.0%
AGGATACTTATGGACCAAGG+AGG - tig0029094:3432-3451 None:intergenic 45.0%
TAGAGGGTAATCTACTGACC+TGG - tig0029094:3763-3782 None:intergenic 45.0%
GAGGAATGCACACTAATGCT+TGG - tig0029094:3958-3977 None:intergenic 45.0%
AGCATTAGTGTGCATTCCTC+TGG + tig0029094:3958-3977 Msa1440590:CDS 45.0%
! CCTATTTCCTTTTGCAGGCT+CGG + tig0029094:4219-4238 Msa1440590:intron 45.0%
GCACTTCTTAGTGTAGCTGT+TGG + tig0029094:4316-4335 Msa1440590:CDS 45.0%
TCATGGAAGTCAGGAATCAC+AGG + tig0029094:4453-4472 Msa1440590:CDS 45.0%
! TTGCTTCATGGTCTTGACCA+TGG + tig0029094:4483-4502 Msa1440590:CDS 45.0%
CTGTCAAATCCTTCTGTCCA+TGG - tig0029094:4503-4522 None:intergenic 45.0%
CATGGACAGAAGGATTTGAC+AGG + tig0029094:4501-4520 Msa1440590:CDS 45.0%
AGGGCAAAAATGGTCATACC+AGG + tig0029094:4521-4540 Msa1440590:CDS 45.0%
ACGACGCTGATACAGAAGTT+AGG - tig0029094:4562-4581 None:intergenic 45.0%
!! ACACAAACAGGTTGGCCTAA+AGG + tig0029094:4650-4669 Msa1440590:intron 45.0%
!! CACAAACAGGTTGGCCTAAA+GGG + tig0029094:4651-4670 Msa1440590:intron 45.0%
!! ACAAACAGGTTGGCCTAAAG+GGG + tig0029094:4652-4671 Msa1440590:intron 45.0%
AATTCATAGCCTCCCCCTTT+AGG - tig0029094:4668-4687 None:intergenic 45.0%
AAAGGGGGAGGCTATGAATT+TGG + tig0029094:4668-4687 Msa1440590:CDS 45.0%
!! ACCTTGTGCCATTTCAACTG+TGG - tig0029094:4756-4775 None:intergenic 45.0%
GTGCATTGAAATGTGCCTGA+AGG - tig0029094:4857-4876 None:intergenic 45.0%
GCACATTTCAATGCACCTGA+TGG + tig0029094:4861-4880 Msa1440590:CDS 45.0%
ACCTGATGGAGTTGAACCAT+TGG + tig0029094:4875-4894 Msa1440590:CDS 45.0%
TGGAGTTGAACCATTGGCAT+TGG + tig0029094:4881-4900 Msa1440590:CDS 45.0%
GCATTGGACATGAGCAGTAT+GGG + tig0029094:4897-4916 Msa1440590:CDS 45.0%
GACATGAGCAGTATGGGAAA+GGG + tig0029094:4903-4922 Msa1440590:CDS 45.0%
GTATGGGAAAGGGTCAAGTA+TGG + tig0029094:4913-4932 Msa1440590:CDS 45.0%
TTTCGCCTGACGATAAGTTC+CGG - tig0029094:5009-5028 None:intergenic 45.0%
TTTGCAGGTACCATGTTCCA+AGG + tig0029094:5147-5166 Msa1440590:intron 45.0%
TTAACCAGGACCTTGGAACA+TGG - tig0029094:5160-5179 None:intergenic 45.0%
!!! GTTGGTTTTAACCAGGACCT+TGG - tig0029094:5167-5186 None:intergenic 45.0%
GAGAATGAGTATGGCCCACA+AGG + tig0029094:2206-2225 Msa1440590:CDS 50.0%
CTCCAAGTGCTCTTCCTTGT+GGG - tig0029094:2223-2242 None:intergenic 50.0%
TGGGCTGCAAAAATGGCTGT+TGG + tig0029094:2266-2285 Msa1440590:CDS 50.0%
GATTAGGTACAGGTGTCCCT+TGG + tig0029094:2288-2307 Msa1440590:CDS 50.0%
TGTCCCTTGGGTGATGTGTA+AGG + tig0029094:2301-2320 Msa1440590:CDS 50.0%
CTAACTCACCACTGGATCTG+GGG - tig0029094:2336-2355 None:intergenic 50.0%
GCTAACTCACCACTGGATCT+GGG - tig0029094:2337-2356 None:intergenic 50.0%
! CTATGGACTGAGTCATGGAG+TGG + tig0029094:2618-2637 Msa1440590:CDS 50.0%
GTCCGAAATTAGTTCCTCCG+TGG - tig0029094:2967-2986 None:intergenic 50.0%
ACTAATTTCGGACGATCGGC+TGG + tig0029094:2974-2993 Msa1440590:CDS 50.0%
GGGAGGATACTTATGGACCA+AGG - tig0029094:3435-3454 None:intergenic 50.0%
CATCTGTCCTACAATCAGGG+AGG - tig0029094:3452-3471 None:intergenic 50.0%
CCGAGCCTGCAAAAGGAAAT+AGG - tig0029094:4222-4241 None:intergenic 50.0%
! CTTTTGCAGGCTCGGCTTTT+GGG + tig0029094:4227-4246 Msa1440590:intron 50.0%
TTCCAGCACGTAGGTCGATA+GGG - tig0029094:4285-4304 None:intergenic 50.0%
! TGGTCTTGACCATGGACAGA+AGG + tig0029094:4491-4510 Msa1440590:CDS 50.0%
AGGTTTGCGTGCATCATACC+TGG - tig0029094:4542-4561 None:intergenic 50.0%
!! CAAACAGGTTGGCCTAAAGG+GGG + tig0029094:4653-4672 Msa1440590:intron 50.0%
!! TGTGCCATTTCAACTGTGGC+TGG - tig0029094:4752-4771 None:intergenic 50.0%
GCCACAGTTGAAATGGCACA+AGG + tig0029094:4752-4771 Msa1440590:CDS 50.0%
GCCAATGGTTCAACTCCATC+AGG - tig0029094:4879-4898 None:intergenic 50.0%
CTGCTCATGTCCAATGCCAA+TGG - tig0029094:4894-4913 None:intergenic 50.0%
! GGCATTGGACATGAGCAGTA+TGG + tig0029094:4896-4915 Msa1440590:CDS 50.0%
GGACATGAGCAGTATGGGAA+AGG + tig0029094:4902-4921 Msa1440590:CDS 50.0%
CTATGCCGGAACTTATCGTC+AGG + tig0029094:5001-5020 Msa1440590:CDS 50.0%
!! GCGAAATGCCAAGTTGGTTG+TGG + tig0029094:5023-5042 Msa1440590:CDS 50.0%
TAGGCTGTCCACAACCAACT+TGG - tig0029094:5034-5053 None:intergenic 50.0%
GTGGACAGCCTACTCAAAGA+TGG + tig0029094:5042-5061 Msa1440590:CDS 50.0%
GCTCCAAGTGCTCTTCCTTG+TGG - tig0029094:2224-2243 None:intergenic 55.0%
!! GGAAGAGCACTTGGAGCTTC+TGG + tig0029094:2227-2246 Msa1440590:CDS 55.0%
AGATGATGCCCCAGATCCAG+TGG + tig0029094:2325-2344 Msa1440590:CDS 55.0%
GGCTAACTCACCACTGGATC+TGG - tig0029094:2338-2357 None:intergenic 55.0%
CGAGAAGGCTAACTCACCAC+TGG - tig0029094:2344-2363 None:intergenic 55.0%
GGACTGAGTCATGGAGTGGT+TGG + tig0029094:2622-2641 Msa1440590:CDS 55.0%
AATTTCGGACGATCGGCTGG+AGG + tig0029094:2977-2996 Msa1440590:CDS 55.0%
! GGCACTATGACTTGCCTCCT+TGG + tig0029094:3415-3434 Msa1440590:CDS 55.0%
CACATGGACAGCATCACCAG+AGG - tig0029094:3977-3996 None:intergenic 55.0%
CCAAAAGCCGAGCCTGCAAA+AGG - tig0029094:4229-4248 None:intergenic 55.0%
! CCTTTTGCAGGCTCGGCTTT+TGG + tig0029094:4226-4245 Msa1440590:intron 55.0%
!!! AGGCTCGGCTTTTGGGACAA+GGG + tig0029094:4234-4253 Msa1440590:intron 55.0%
GTTCCAGCACGTAGGTCGAT+AGG - tig0029094:4286-4305 None:intergenic 55.0%
CGTCAGGCGAAATGCCAAGT+TGG + tig0029094:5017-5036 Msa1440590:CDS 55.0%
GGTACCATGTTCCAAGGTCC+TGG + tig0029094:5153-5172 Msa1440590:intron 55.0%
!! GGCCCACAAGGAAGAGCACT+TGG + tig0029094:2218-2237 Msa1440590:CDS 60.0%
! AGATCCTGCACTGGTCGCTG+GGG - tig0029094:2790-2809 None:intergenic 60.0%
! GAGATCCTGCACTGGTCGCT+GGG - tig0029094:2791-2810 None:intergenic 60.0%
!!! CAGGCTCGGCTTTTGGGACA+AGG + tig0029094:4233-4252 Msa1440590:intron 60.0%
!! ACAGGTTGGCCTAAAGGGGG+AGG + tig0029094:4656-4675 Msa1440590:intron 60.0%
! GATCCTGCACTGGTCGCTGG+GGG - tig0029094:2789-2808 None:intergenic 65.0%
! CGAGATCCTGCACTGGTCGC+TGG - tig0029094:2792-2811 None:intergenic 65.0%
GCGAACGCGAGATCCTGCAC+TGG - tig0029094:2799-2818 None:intergenic 65.0%
GGCCCTATCGACCTACGTGC+TGG + tig0029094:4280-4299 Msa1440590:CDS 65.0%
GAACCCCCAGCGACCAGTGC+AGG + tig0029094:2783-2802 Msa1440590:CDS 70.0%
Chromosome Type Strat End Strand Name
tig0029094 gene 942 5650 942 ID=Msa1440590;Name=Msa1440590
tig0029094 mRNA 942 5650 942 ID=Msa1440590-mRNA-1;Parent=Msa1440590;Name=Msa1440590-mRNA-1;_AED=0.06;_eAED=0.06;_QI=173|0.94|0.94|1|1|1|18|337|749
tig0029094 exon 942 1288 942 ID=Msa1440590-mRNA-1:exon:12312;Parent=Msa1440590-mRNA-1
tig0029094 exon 1379 1474 1379 ID=Msa1440590-mRNA-1:exon:12313;Parent=Msa1440590-mRNA-1
tig0029094 exon 1593 1705 1593 ID=Msa1440590-mRNA-1:exon:12314;Parent=Msa1440590-mRNA-1
tig0029094 exon 1804 1870 1804 ID=Msa1440590-mRNA-1:exon:12315;Parent=Msa1440590-mRNA-1
tig0029094 exon 1975 2067 1975 ID=Msa1440590-mRNA-1:exon:12316;Parent=Msa1440590-mRNA-1
tig0029094 exon 2203 2346 2203 ID=Msa1440590-mRNA-1:exon:12317;Parent=Msa1440590-mRNA-1
tig0029094 exon 2555 2643 2555 ID=Msa1440590-mRNA-1:exon:12318;Parent=Msa1440590-mRNA-1
tig0029094 exon 2762 2879 2762 ID=Msa1440590-mRNA-1:exon:12319;Parent=Msa1440590-mRNA-1
tig0029094 exon 2962 3049 2962 ID=Msa1440590-mRNA-1:exon:12320;Parent=Msa1440590-mRNA-1
tig0029094 exon 3133 3251 3133 ID=Msa1440590-mRNA-1:exon:12321;Parent=Msa1440590-mRNA-1
tig0029094 exon 3327 3488 3327 ID=Msa1440590-mRNA-1:exon:12322;Parent=Msa1440590-mRNA-1
tig0029094 exon 3585 3763 3585 ID=Msa1440590-mRNA-1:exon:12323;Parent=Msa1440590-mRNA-1
tig0029094 exon 3909 4018 3909 ID=Msa1440590-mRNA-1:exon:12324;Parent=Msa1440590-mRNA-1
tig0029094 exon 4236 4345 4236 ID=Msa1440590-mRNA-1:exon:12325;Parent=Msa1440590-mRNA-1
tig0029094 exon 4432 4542 4432 ID=Msa1440590-mRNA-1:exon:12326;Parent=Msa1440590-mRNA-1
tig0029094 exon 4660 4773 4660 ID=Msa1440590-mRNA-1:exon:12327;Parent=Msa1440590-mRNA-1
tig0029094 exon 4861 5063 4861 ID=Msa1440590-mRNA-1:exon:12328;Parent=Msa1440590-mRNA-1
tig0029094 exon 5154 5650 5154 ID=Msa1440590-mRNA-1:exon:12329;Parent=Msa1440590-mRNA-1
tig0029094 five_prime_UTR 942 1114 942 ID=Msa1440590-mRNA-1:five_prime_utr;Parent=Msa1440590-mRNA-1
tig0029094 CDS 1115 1288 1115 ID=Msa1440590-mRNA-1:cds;Parent=Msa1440590-mRNA-1
tig0029094 CDS 1379 1474 1379 ID=Msa1440590-mRNA-1:cds;Parent=Msa1440590-mRNA-1
tig0029094 CDS 1593 1705 1593 ID=Msa1440590-mRNA-1:cds;Parent=Msa1440590-mRNA-1
tig0029094 CDS 1804 1870 1804 ID=Msa1440590-mRNA-1:cds;Parent=Msa1440590-mRNA-1
tig0029094 CDS 1975 2067 1975 ID=Msa1440590-mRNA-1:cds;Parent=Msa1440590-mRNA-1
tig0029094 CDS 2203 2346 2203 ID=Msa1440590-mRNA-1:cds;Parent=Msa1440590-mRNA-1
tig0029094 CDS 2555 2643 2555 ID=Msa1440590-mRNA-1:cds;Parent=Msa1440590-mRNA-1
tig0029094 CDS 2762 2879 2762 ID=Msa1440590-mRNA-1:cds;Parent=Msa1440590-mRNA-1
tig0029094 CDS 2962 3049 2962 ID=Msa1440590-mRNA-1:cds;Parent=Msa1440590-mRNA-1
tig0029094 CDS 3133 3251 3133 ID=Msa1440590-mRNA-1:cds;Parent=Msa1440590-mRNA-1
tig0029094 CDS 3327 3488 3327 ID=Msa1440590-mRNA-1:cds;Parent=Msa1440590-mRNA-1
tig0029094 CDS 3585 3763 3585 ID=Msa1440590-mRNA-1:cds;Parent=Msa1440590-mRNA-1
tig0029094 CDS 3909 4018 3909 ID=Msa1440590-mRNA-1:cds;Parent=Msa1440590-mRNA-1
tig0029094 CDS 4236 4345 4236 ID=Msa1440590-mRNA-1:cds;Parent=Msa1440590-mRNA-1
tig0029094 CDS 4432 4542 4432 ID=Msa1440590-mRNA-1:cds;Parent=Msa1440590-mRNA-1
tig0029094 CDS 4660 4773 4660 ID=Msa1440590-mRNA-1:cds;Parent=Msa1440590-mRNA-1
tig0029094 CDS 4861 5063 4861 ID=Msa1440590-mRNA-1:cds;Parent=Msa1440590-mRNA-1
tig0029094 CDS 5154 5313 5154 ID=Msa1440590-mRNA-1:cds;Parent=Msa1440590-mRNA-1
tig0029094 three_prime_UTR 5314 5650 5314 ID=Msa1440590-mRNA-1:three_prime_utr;Parent=Msa1440590-mRNA-1
Gene Sequence

>Msa1440590

ATGGAAACCAACTCAGTTTCCAAGCTTCTTCTGTTACTATTCTTCTCTATCTTCTTTCTTGGTTCTAAGCTTATTCATTGTAGTGTTACATATGATAGAAAAGCTATTATCATCAATGGCCAAAGGAGAATCCTCATCTCTGGTTCCATTCATTATCCAAGAAGCACCCCTGAAATGTGGGAGGATCTGATTCAGAAAGCAAAAGATGGAGGGTTGGATGTTATTGATACTTATGTGTTTTGGAATGTTCATGAACCTTCTCCTGGCAATTACAATTTTGAAGGAAGGTACGATCTAGTACATTTCATTAAGACAGTGCAGAAAAAAGGTCTTTATGTACATCTTAGAATTGGACCTTATGTTTGTGCTGAGTGGAACTTTGGAGGATTTCCTGTTTGGTTGAAGTATGTTCCTGGGATCAGTTTCAGAACAGATAATGGTCCTTTTAAGGCTGCAATGCAAGGTTTTACACAGAAGATTGTTCAAATGATGAAGAATGAAAAGCTGTTTCAGTCACAAGGTGGTCCAATAATTCTTTCACAAATTGAGAATGAGTATGGCCCACAAGGAAGAGCACTTGGAGCTTCTGGTCATGCATACTCAAACTGGGCTGCAAAAATGGCTGTTGGATTAGGTACAGGTGTCCCTTGGGTGATGTGTAAGGAAGATGATGCCCCAGATCCAGTGATAAATGCTTGCAATGGTTTTTACTGTGATGATTTCACTCCCAATAAACCATACAAGCCTAAACTATGGACTGAGTCATGGAGTGGTTGGTTTTCAGAATTTGGTGGAACGAACCCCCAGCGACCAGTGCAGGATCTCGCGTTCGCAGTTGCTCGTTTCATACAAAAGGGTGGTTCATTCTTTAATTATTACATGGTTGGTTACCTGTACCACGGAGGAACTAATTTCGGACGATCGGCTGGAGGACCATTCATAACTACAAGCTATGACTATGATGCTCCAATTGATGAATATGGTTTGTTAAGAGAACCTAAATATGGTCATTTGAAGGACCTTCATAAAGCTATCAAGCAATGTGAACATGCTTTGGTTTCATCAGATCCTACTGTTACATCATTAGGAGCATATGAACAGGCATATGTATTCTCTTCAGGAACAACCTGTGCAGCTTTTCTAGCAAACTATCATTCGAATTCGGCTGCAAGAGTAACCTTCAATAATAGGCACTATGACTTGCCTCCTTGGTCCATAAGTATCCTCCCTGATTGTAGGACAGATGTATTTAACACTGCAAGAATGAGGTTTCAACCTTCACAAATCCAAATGTTGCCTAGCAATTCTAAGTTGTTATCATGGGAGACCTATGATGAAGATGTATCTTCGCTAGCGGAAAGTTCTAGAATCACAGCTTCTAGACTTCTGGAACAGATAGATGCTACAAGAGATACTAGTGACTATCTATGGTATATAACCAGTGTTGACATAAGTTCATCAGAATCATTTCTTCGTGGAAGGAACAAACCAAGCATTAGTGTGCATTCCTCTGGTGATGCTGTCCATGTGTTTATCAATGGGAAATTTTCAGGCTCGGCTTTTGGGACAAGGGAAGACAGAAGTTTCACATTTAACGGCCCTATCGACCTACGTGCTGGAACTAATAAAATAGCACTTCTTAGTGTAGCTGTTGGATTGCCTAATAGTGGAATCCATTTTGAATCATGGAAGTCAGGAATCACAGGTCCAATTTTGCTTCATGGTCTTGACCATGGACAGAAGGATTTGACAGGGCAAAAATGGTCATACCAGGTTGGCCTAAAGGGGGAGGCTATGAATTTGGTGTCTCCCAATGGAGTCTCATCTGTTGATTGGGTGAGAGAGTCATTAGCTTCTCAAAACCAGCCACAGTTGAAATGGCACAAGGCACATTTCAATGCACCTGATGGAGTTGAACCATTGGCATTGGACATGAGCAGTATGGGAAAGGGTCAAGTATGGATCAATGGACAAAGCATAGGAAGATATTGGATGGTTTATGCAAAGGGCAACTGCAATTCTTGCAACTATGCCGGAACTTATCGTCAGGCGAAATGCCAAGTTGGTTGTGGACAGCCTACTCAAAGATGGTACCATGTTCCAAGGTCCTGGTTAAAACCAACAAACAACTTGATGGTAGTTTTTGAAGAATTAGGAGGGAATCCTTGGAAAATATCTCTGGTAAAGAGGATAATACATACTCCAAGATCTAGTAAACCAAATTTAATGACTAATACAACACAAGTATGA
Protein sequence

>Msa1440590

METNSVSKLLLLLFFSIFFLGSKLIHCSVTYDRKAIIINGQRRILISGSIHYPRSTPEMWEDLIQKAKDGGLDVIDTYVFWNVHEPSPGNYNFEGRYDLVHFIKTVQKKGLYVHLRIGPYVCAEWNFGGFPVWLKYVPGISFRTDNGPFKAAMQGFTQKIVQMMKNEKLFQSQGGPIILSQIENEYGPQGRALGASGHAYSNWAAKMAVGLGTGVPWVMCKEDDAPDPVINACNGFYCDDFTPNKPYKPKLWTESWSGWFSEFGGTNPQRPVQDLAFAVARFIQKGGSFFNYYMVGYLYHGGTNFGRSAGGPFITTSYDYDAPIDEYGLLREPKYGHLKDLHKAIKQCEHALVSSDPTVTSLGAYEQAYVFSSGTTCAAFLANYHSNSAARVTFNNRHYDLPPWSISILPDCRTDVFNTARMRFQPSQIQMLPSNSKLLSWETYDEDVSSLAESSRITASRLLEQIDATRDTSDYLWYITSVDISSSESFLRGRNKPSISVHSSGDAVHVFINGKFSGSAFGTREDRSFTFNGPIDLRAGTNKIALLSVAVGLPNSGIHFESWKSGITGPILLHGLDHGQKDLTGQKWSYQVGLKGEAMNLVSPNGVSSVDWVRESLASQNQPQLKWHKAHFNAPDGVEPLALDMSSMGKGQVWINGQSIGRYWMVYAKGNCNSCNYAGTYRQAKCQVGCGQPTQRWYHVPRSWLKPTNNLMVVFEELGGNPWKISLVKRIIHTPRSSKPNLMTNTTQV*