AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0039790

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0039790 MtrunA17_Chr1g0204321 98.314 771 13 0 1 771 12 782 0.0 1570
Msa0039790 MtrunA17_Chr4g0053781 51.245 763 348 7 9 767 14 756 0.0 799
Msa0039790 MtrunA17_Chr2g0300751 50.575 783 359 10 2 767 3 774 0.0 779
Msa0039790 MtrunA17_Chr4g0037221 49.548 775 351 12 14 771 22 773 0.0 743
Msa0039790 MtrunA17_Chr5g0401511 49.103 780 362 9 1 767 5 762 0.0 734
Msa0039790 MtrunA17_Chr1g0152771 48.771 773 361 11 10 767 12 764 0.0 717
Msa0039790 MtrunA17_Chr4g0020651 48.721 782 362 10 1 767 1 758 0.0 712
Msa0039790 MtrunA17_Chr4g0070391 49.032 775 353 12 4 767 10 753 0.0 711
Msa0039790 MtrunA17_Chr8g0344971 48.425 762 357 9 23 771 27 765 0.0 681
Msa0039790 MtrunA17_Chr3g0134621 46.565 786 352 11 1 767 1 737 0.0 670
Msa0039790 MtrunA17_Chr8g0344331 48.349 757 354 15 24 763 36 772 0.0 660
Msa0039790 MtrunA17_Chr7g0246461 45.232 776 365 11 9 767 9 741 0.0 643
Msa0039790 MtrunA17_Chr7g0262161 45.778 758 375 15 25 767 26 762 0.0 630
Msa0039790 MtrunA17_Chr4g0076611 43.865 709 369 13 70 765 1 693 0.0 577
Msa0039790 MtrunA17_Chr3g0120521 42.437 714 384 13 65 765 70 769 0.0 577
Msa0039790 MtrunA17_Chr8g0369891 41.854 755 397 13 21 765 30 752 0.0 568
Msa0039790 MtrunA17_Chr5g0407701 42.727 770 396 17 9 765 12 749 0.0 561
Msa0039790 MtrunA17_Chr8g0345981 41.762 783 402 21 8 766 6 758 0.0 557
Msa0039790 MtrunA17_Chr4g0057531 42.556 759 407 17 23 765 31 776 0.0 549
Msa0039790 MtrunA17_Chr1g0189251 39.290 789 425 18 1 768 1 756 0.0 548
Msa0039790 MtrunA17_Chr4g0057471 44.180 713 373 16 67 766 9 709 0.0 547
Msa0039790 MtrunA17_Chr4g0057481 45.214 679 352 13 99 767 23 691 0.0 543
Msa0039790 MtrunA17_Chr8g0345991 40.788 787 412 21 1 766 1 754 0.0 542
Msa0039790 MtrunA17_Chr8g0345971 38.812 791 431 18 1 768 1 761 0.0 541
Msa0039790 MtrunA17_Chr4g0026641 41.473 774 411 21 4 763 6 751 0.0 536
Msa0039790 MtrunA17_Chr4g0057061 42.245 793 375 25 11 767 31 776 2.01e-180 535
Msa0039790 MtrunA17_Chr2g0285111 41.622 740 385 15 61 767 62 787 1.63e-175 523
Msa0039790 MtrunA17_Chr2g0285121 42.282 745 374 17 63 768 58 785 2.10e-175 523
Msa0039790 MtrunA17_Chr8g0354771 41.688 770 405 16 13 761 13 759 4.40e-174 519
Msa0039790 MtrunA17_Chr1g0189561 39.922 774 426 17 4 765 14 760 1.15e-173 518
Msa0039790 MtrunA17_Chr7g0248871 38.412 781 439 18 1 765 9 763 2.59e-173 517
Msa0039790 MtrunA17_Chr8g0345961 38.981 785 421 19 4 766 9 757 1.15e-171 513
Msa0039790 MtrunA17_Chr5g0423261 44.921 630 330 11 147 767 2 623 1.81e-169 502
Msa0039790 MtrunA17_Chr7g0276151 38.590 780 433 15 4 768 10 758 2.38e-169 506
Msa0039790 MtrunA17_Chr4g0057491 44.356 629 333 11 148 767 3 623 4.74e-167 496
Msa0039790 MtrunA17_Chr7g0250481 38.599 785 424 22 23 765 29 797 1.71e-166 500
Msa0039790 MtrunA17_Chr5g0398331 40.873 756 390 15 25 768 43 753 4.03e-166 498
Msa0039790 MtrunA17_Chr7g0250371 39.464 783 426 22 13 765 20 784 9.06e-166 498
Msa0039790 MtrunA17_Chr5g0398311 41.301 753 387 14 25 768 43 749 2.64e-165 496
Msa0039790 MtrunA17_Chr5g0398241 41.138 756 390 18 25 768 44 756 1.83e-162 489
Msa0039790 MtrunA17_Chr2g0303881 39.252 749 406 17 36 766 9 726 3.20e-162 487
Msa0039790 MtrunA17_Chr4g0057511 43.860 627 329 13 152 767 3 617 4.78e-162 483
Msa0039790 MtrunA17_Chr8g0377961 38.701 770 429 15 13 765 31 774 1.94e-161 487
Msa0039790 MtrunA17_Chr3g0136151 41.111 720 388 18 66 766 60 762 6.86e-161 485
Msa0039790 MtrunA17_Chr5g0398401 40.662 755 393 18 25 767 44 755 1.47e-160 484
Msa0039790 MtrunA17_Chr7g0250411 38.599 785 429 23 13 765 20 783 3.30e-160 484
Msa0039790 MtrunA17_Chr3g0143251 40.358 726 386 19 66 768 66 767 6.09e-159 480
Msa0039790 MtrunA17_Chr5g0398351 40.921 760 397 13 18 767 18 735 8.95e-159 499
Msa0039790 MtrunA17_Chr5g0398351 40.903 753 394 14 25 767 795 1506 7.04e-156 491
Msa0039790 MtrunA17_Chr7g0266051 41.111 720 377 21 58 765 21 705 1.25e-158 477
Msa0039790 MtrunA17_Chr7g0250391 37.736 795 440 23 4 765 10 782 3.26e-157 476
Msa0039790 MtrunA17_Chr8g0351011 40.463 734 375 21 52 769 67 754 4.93e-157 474
Msa0039790 MtrunA17_Chr8g0334521 38.028 781 411 23 4 768 13 736 1.28e-156 473
Msa0039790 MtrunA17_Chr7g0227991 38.217 785 410 23 1 765 4 733 1.51e-156 473
Msa0039790 MtrunA17_Chr4g0057461 42.138 636 340 17 148 765 3 628 3.23e-155 466
Msa0039790 MtrunA17_Chr7g0246451 40.056 714 378 19 67 769 74 748 1.83e-154 468
Msa0039790 MtrunA17_Chr7g0250331 38.250 800 424 26 18 765 25 806 1.54e-153 467
Msa0039790 MtrunA17_Chr8g0354741 42.746 641 332 13 137 765 16 633 6.68e-152 457
Msa0039790 MtrunA17_Chr6g0470851 39.360 719 368 24 62 765 64 729 1.51e-149 454
Msa0039790 MtrunA17_Chr1g0146271 39.394 759 388 26 24 768 35 735 4.17e-149 453
Msa0039790 MtrunA17_Chr1g0170081 37.227 779 421 22 1 768 12 733 7.89e-148 450
Msa0039790 MtrunA17_Chr1g0146251 39.972 723 369 24 62 768 64 737 7.79e-147 447
Msa0039790 MtrunA17_Chr6g0470881 39.470 717 365 24 64 765 67 729 2.53e-146 446
Msa0039790 MtrunA17_Chr3g0079971 36.650 794 410 29 4 768 5 734 1.02e-144 442
Msa0039790 MtrunA17_Chr5g0439271 42.645 605 312 15 185 765 8 601 3.73e-141 428
Msa0039790 MtrunA17_Chr8g0334491 37.466 734 377 25 58 769 58 731 4.75e-141 432
Msa0039790 MtrunA17_Chr7g0248861 39.839 620 339 16 18 622 22 622 2.51e-135 421
Msa0039790 MtrunA17_Chr7g0248861 49.356 233 115 3 131 362 629 859 2.90e-56 207
Msa0039790 MtrunA17_Chr8g0376841 40.342 585 284 18 23 584 39 581 3.02e-120 374
Msa0039790 MtrunA17_Chr2g0301011 38.899 563 244 19 98 647 3 478 3.39e-104 329
Msa0039790 MtrunA17_Chr2g0298601 33.423 742 425 25 71 763 90 811 1.05e-101 332
Msa0039790 MtrunA17_Chr4g0071871 32.577 749 434 23 71 769 90 817 2.21e-100 328
Msa0039790 MtrunA17_Chr7g0261691 44.868 341 173 6 144 475 13 347 1.94e-90 288
Msa0039790 MtrunA17_Chr2g0302951 30.937 779 457 29 46 767 86 840 4.02e-88 296
Msa0039790 MtrunA17_Chr5g0447171 36.276 521 256 13 299 765 9 507 5.98e-87 284
Msa0039790 MtrunA17_Chr4g0075331 30.475 758 460 23 58 769 3 739 1.38e-86 289
Msa0039790 MtrunA17_Chr3g0143241 36.518 471 265 12 15 475 26 472 1.25e-83 276
Msa0039790 MtrunA17_Chr7g0250461 36.111 468 262 15 13 457 20 473 5.08e-81 268
Msa0039790 MtrunA17_Chr8g0380961 30.371 754 440 28 71 765 118 845 1.23e-79 273
Msa0039790 MtrunA17_Chr6g0480721 44.025 318 158 6 70 384 5 305 1.56e-76 259
Msa0039790 MtrunA17_Chr6g0480721 40.446 314 174 6 453 765 298 599 6.72e-60 214
Msa0039790 MtrunA17_Chr7g0261701 45.196 281 143 6 486 765 19 289 1.96e-74 243
Msa0039790 MtrunA17_Chr4g0026651 43.987 316 141 6 85 367 2 314 3.46e-74 243
Msa0039790 MtrunA17_Chr4g0035881 40.000 370 158 8 223 584 4 317 4.57e-68 228
Msa0039790 MtrunA17_Chr3g0097061 40.000 325 158 11 98 413 3 299 3.20e-63 218
Msa0039790 MtrunA17_Chr3g0097061 54.167 96 36 2 543 638 330 417 1.19e-23 104
Msa0039790 MtrunA17_Chr8g0346361 41.026 312 156 8 467 768 206 499 7.39e-63 219
Msa0039790 MtrunA17_Chr8g0346361 44.554 202 93 5 161 360 4 188 3.44e-46 172
Msa0039790 MtrunA17_Chr7g0250441 46.127 284 144 6 485 765 5 282 9.96e-63 213
Msa0039790 MtrunA17_Chr4g0026661 44.706 255 129 8 512 763 12 257 1.35e-59 202
Msa0039790 MtrunA17_Chr3g0105461 38.384 297 137 6 66 358 65 319 1.16e-55 195
Msa0039790 MtrunA17_Chr2g0312861 41.923 260 131 8 512 765 1 246 1.29e-52 185
Msa0039790 MtrunA17_Chr3g0105451 40.411 292 142 10 486 766 9 279 2.26e-52 183
Msa0039790 MtrunA17_Chr2g0301911 36.388 371 180 16 161 515 30 360 4.12e-51 183
Msa0039790 MtrunA17_Chr2g0301031 41.699 259 133 8 512 765 1 246 7.09e-51 178
Msa0039790 MtrunA17_Chr3g0103071 35.540 287 175 5 271 551 1 283 1.64e-47 170
Msa0039790 MtrunA17_Chr3g0103061 36.122 263 156 5 5 263 8 262 4.44e-46 165
Msa0039790 MtrunA17_Chr2g0312841 41.327 196 97 4 161 354 9 188 6.52e-40 145
Msa0039790 MtrunA17_Chr4g0071191 41.827 208 102 5 493 695 57 250 9.03e-40 147
Msa0039790 MtrunA17_Chr5g0436021 48.193 166 73 3 186 348 31 186 4.69e-38 140
Msa0039790 MtrunA17_Chr2g0301921 37.788 217 119 7 553 765 1 205 4.56e-35 132
Msa0039790 MtrunA17_Chr5g0418921 47.826 138 67 3 481 615 1 136 1.65e-31 121
Msa0039790 MtrunA17_Chr3g0077671 82.192 73 12 1 543 614 236 308 6.43e-30 120
Msa0039790 MtrunA17_Chr2g0301021 28.217 443 195 18 9 437 10 343 6.92e-30 122
Msa0039790 MtrunA17_Chr7g0248851 40.268 149 83 3 620 765 1 146 6.41e-28 110
Msa0039790 MtrunA17_Chr3g0143021 43.925 107 57 1 66 172 3 106 4.22e-24 97.8
Msa0039790 MtrunA17_Chr5g0439281 35.196 179 101 5 4 173 8 180 8.53e-24 99.8
Msa0039790 MtrunA17_Chr3g0143231 57.778 90 37 1 495 584 1 89 9.84e-24 95.9
Msa0039790 MtrunA17_Chr3g0142971 58.140 86 35 1 495 580 1 85 4.81e-23 94.0
Msa0039790 MtrunA17_Chr3g0142981 36.994 173 69 3 211 369 47 193 6.37e-23 97.4
Msa0039790 MtrunA17_Chr5g0436031 35.542 166 102 2 600 765 20 180 1.35e-21 94.0
Msa0039790 MtrunA17_Chr8g0376851 34.524 168 102 4 601 765 9 171 2.47e-21 92.0
Msa0039790 MtrunA17_Chr3g0103081 38.255 149 86 5 620 767 1 144 2.67e-21 90.9
Msa0039790 MtrunA17_Chr5g0398341 51.613 93 28 3 553 637 1 84 1.07e-19 84.7
Msa0039790 MtrunA17_Chr8g0346351 34.356 163 93 6 5 167 17 165 1.23e-17 81.3
Msa0039790 MtrunA17_Chr4g0035871 32.331 133 61 2 67 185 33 150 9.10e-16 75.5
Msa0039790 MtrunA17_Chr3g0143011 56.000 50 22 0 309 358 1 50 2.50e-13 65.5
Msa0039790 MtrunA17_Chr3g0143221 31.765 170 92 7 603 766 12 163 2.58e-13 68.6
Msa0039790 MtrunA17_Chr4g0057521 41.304 92 51 2 58 147 7 97 1.07e-12 66.6
Msa0039790 MtrunA17_Chr3g0142961 34.109 129 76 5 603 725 12 137 1.12e-12 65.9
Msa0039790 MtrunA17_Chr4g0057501 45.882 85 43 2 67 149 47 130 3.54e-12 64.3
Msa0039790 MtrunA17_Chr8g0346961 29.167 120 79 3 582 698 1 117 9.92e-12 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0039790 AT5G51750.1 70.026 774 216 5 10 771 11 780 0.0 1120
Msa0039790 AT5G67360.1 51.100 773 351 9 2 767 4 756 0.0 788
Msa0039790 AT2G05920.1 50.852 763 342 9 10 767 17 751 0.0 753
Msa0039790 AT3G14240.1 49.410 763 356 9 25 771 27 775 0.0 737
Msa0039790 AT4G34980.1 48.780 779 366 10 2 768 4 761 0.0 728
Msa0039790 AT3G14067.1 48.221 759 358 13 24 767 31 769 0.0 689
Msa0039790 AT1G04110.1 44.000 775 406 13 8 766 9 771 0.0 621
Msa0039790 AT1G01900.1 44.768 755 385 10 23 767 41 773 0.0 609
Msa0039790 AT2G04160.1 44.585 711 368 13 68 765 73 770 0.0 592
Msa0039790 AT5G59810.1 41.347 757 411 15 22 765 38 774 0.0 548
Msa0039790 AT5G45650.2 40.304 789 403 16 23 766 24 789 6.92e-180 535
Msa0039790 AT5G45650.1 40.304 789 403 16 23 766 24 789 6.92e-180 535
Msa0039790 AT1G20160.2 40.979 715 385 16 70 766 28 723 2.77e-165 495
Msa0039790 AT1G20160.1 40.979 715 385 16 70 766 67 762 8.41e-165 495
Msa0039790 AT4G00230.1 41.352 769 386 22 16 769 28 746 6.23e-164 493
Msa0039790 AT5G67090.1 38.521 771 393 18 4 755 8 716 1.90e-159 481
Msa0039790 AT5G59090.1 38.654 758 395 19 24 768 31 731 5.75e-159 479
Msa0039790 AT5G59120.1 38.992 754 394 18 23 765 29 727 1.49e-158 478
Msa0039790 AT5G59090.3 38.940 755 395 21 24 768 31 729 1.52e-158 478
Msa0039790 AT4G10520.1 38.630 774 429 18 4 765 5 744 4.73e-158 478
Msa0039790 AT5G59090.2 38.675 755 394 20 24 768 31 726 2.52e-157 475
Msa0039790 AT5G58840.1 37.792 770 400 19 1 765 11 706 3.82e-157 474
Msa0039790 AT4G10550.1 38.314 783 425 19 11 765 14 766 4.20e-154 468
Msa0039790 AT5G59190.1 40.845 710 363 21 70 770 32 693 7.42e-154 464
Msa0039790 AT4G10550.3 38.138 784 423 19 12 765 31 782 2.59e-153 466
Msa0039790 AT4G10550.4 39.834 723 386 16 67 765 13 710 2.63e-153 464
Msa0039790 AT4G10550.2 39.834 723 386 16 67 765 13 710 2.63e-153 464
Msa0039790 AT4G26330.2 38.536 724 406 18 64 765 15 721 6.32e-153 463
Msa0039790 AT5G03620.1 38.636 792 414 24 4 765 9 758 1.09e-152 464
Msa0039790 AT1G32940.1 38.158 760 427 16 24 765 28 762 2.47e-152 463
Msa0039790 AT5G59100.1 38.990 713 384 17 67 768 68 740 5.99e-151 459
Msa0039790 AT1G32940.4 38.851 731 409 15 53 765 1 711 9.99e-151 457
Msa0039790 AT1G32940.2 38.851 731 409 15 53 765 1 711 9.99e-151 457
Msa0039790 AT1G32960.1 37.760 768 431 18 18 765 25 765 3.24e-149 455
Msa0039790 AT4G26330.1 37.805 738 406 19 64 765 15 735 6.23e-149 454
Msa0039790 AT1G20150.1 38.820 729 390 18 71 766 66 771 2.13e-148 453
Msa0039790 AT4G10530.1 36.889 778 428 18 4 765 5 735 5.64e-148 451
Msa0039790 AT5G58830.1 36.598 776 401 21 1 765 10 705 7.01e-147 447
Msa0039790 AT5G58820.1 37.484 771 391 20 8 765 8 700 1.36e-146 446
Msa0039790 AT3G46850.1 38.452 775 417 22 3 765 8 734 1.17e-145 445
Msa0039790 AT4G10510.2 38.981 726 381 18 70 765 1 694 3.08e-145 443
Msa0039790 AT4G10540.1 36.849 787 440 20 7 765 6 763 4.83e-145 444
Msa0039790 AT4G10510.4 38.934 732 386 18 65 765 8 709 8.14e-145 442
Msa0039790 AT1G32950.1 37.389 789 436 19 2 765 6 761 1.16e-144 443
Msa0039790 AT4G10510.3 37.247 792 420 21 11 765 14 765 1.16e-144 444
Msa0039790 AT4G10510.1 38.934 732 386 18 65 765 52 753 3.06e-144 442
Msa0039790 AT1G32950.2 39.281 723 388 17 68 765 14 710 1.20e-143 439
Msa0039790 AT5G59130.4 35.696 776 425 21 2 765 12 725 9.05e-143 437
Msa0039790 AT3G46840.1 37.967 777 417 24 1 765 11 734 1.03e-142 437
Msa0039790 AT5G59130.2 35.825 776 414 22 2 765 12 715 4.35e-141 432
Msa0039790 AT5G59130.3 36.996 719 387 19 59 765 22 686 8.60e-141 431
Msa0039790 AT5G59130.1 35.567 776 422 22 2 765 12 721 1.92e-140 431
Msa0039790 AT1G66220.1 36.317 782 431 21 2 765 12 744 3.48e-140 431
Msa0039790 AT4G21650.1 36.269 772 411 21 24 765 40 760 2.02e-138 427
Msa0039790 AT4G21630.1 35.456 801 430 22 2 765 3 753 4.40e-136 421
Msa0039790 AT1G66210.1 35.135 777 446 18 3 765 18 750 5.87e-136 421
Msa0039790 AT5G11940.1 36.364 759 424 20 24 765 36 752 1.81e-135 419
Msa0039790 AT5G45640.1 36.218 751 407 18 65 766 25 752 4.12e-134 416
Msa0039790 AT4G15040.2 36.842 722 396 16 51 765 17 685 2.61e-130 403
Msa0039790 AT4G15040.1 36.842 722 396 16 51 765 17 685 2.61e-130 403
Msa0039790 AT4G00230.2 42.808 577 286 15 16 584 28 568 7.71e-128 394
Msa0039790 AT5G03620.2 40.336 595 315 15 4 585 9 576 1.13e-125 388
Msa0039790 AT5G58840.3 39.353 587 289 15 1 585 11 532 5.93e-124 382
Msa0039790 AT4G21326.1 35.359 724 414 17 58 765 2 687 1.15e-122 384
Msa0039790 AT4G21323.1 34.570 755 433 20 26 763 81 791 1.19e-121 384
Msa0039790 AT1G32940.3 38.983 590 323 13 24 596 28 597 1.80e-117 367
Msa0039790 AT1G32970.1 40.278 576 309 14 206 765 166 722 1.73e-111 355
Msa0039790 AT2G19170.1 32.387 775 447 22 47 764 55 809 4.11e-105 341
Msa0039790 AT2G19170.2 32.387 775 447 22 47 764 55 809 4.11e-105 341
Msa0039790 AT4G30020.3 32.974 743 431 21 71 764 86 810 1.55e-103 337
Msa0039790 AT4G30020.1 32.974 743 431 21 71 764 86 810 1.55e-103 337
Msa0039790 AT4G30020.4 32.974 743 431 21 71 764 86 810 1.55e-103 337
Msa0039790 AT4G30020.2 32.974 743 431 21 71 764 86 810 1.55e-103 337
Msa0039790 AT1G20160.3 41.228 456 242 9 70 513 67 508 2.44e-99 318
Msa0039790 AT5G44530.1 32.527 744 437 24 71 765 106 833 8.80e-99 325
Msa0039790 AT4G20430.3 32.672 756 424 31 71 766 119 849 1.53e-95 317
Msa0039790 AT4G20430.1 32.672 756 424 31 71 766 119 849 1.53e-95 317
Msa0039790 AT1G30600.1 31.740 753 436 25 71 767 98 828 5.09e-95 315
Msa0039790 AT1G62340.1 32.097 782 449 25 47 765 67 829 3.23e-94 312
Msa0039790 AT5G44530.2 31.599 769 436 26 71 765 106 858 6.93e-94 312
Msa0039790 AT4G20430.2 32.483 745 416 30 71 766 119 825 2.82e-93 310
Msa0039790 AT5G58840.2 35.922 515 263 15 1 513 11 460 3.19e-88 286
Msa0039790 AT2G39850.1 30.230 784 461 25 23 765 27 765 3.47e-88 295
Msa0039790 AT4G21640.1 37.596 391 206 8 8 367 11 394 2.41e-70 245
Msa0039790 AT4G21640.1 38.762 307 169 8 464 765 435 727 1.55e-48 183
Msa0039790 AT5G44530.3 32.530 498 291 15 71 528 106 598 5.82e-62 220
Msa0039790 AT1G32980.1 42.781 187 101 3 549 734 3 184 6.60e-37 137
Msa0039790 AT5G59110.1 35.185 162 98 3 609 765 7 166 1.01e-22 96.3

Find 162 sgRNAs with CRISPR-Local

Find 215 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTGAAGAAAATTTAATTATA+AGG 0.168935 1_1:+69777895 None:intergenic
GTCATTGTTACACCATTTAA+AGG 0.178184 1_1:-69775180 Msa0039790:CDS
GCTGCTTGGAGTGGACTTAC+TGG 0.235422 1_1:-69775717 Msa0039790:CDS
CACACCAAACCTCCAAATTC+TGG 0.235592 1_1:+69775057 None:intergenic
TCATGTTCAGCTGGAAATTC+AGG 0.240133 1_1:-69776344 Msa0039790:CDS
TGTAGTTGGTACTTTGTATC+TGG 0.249389 1_1:+69777464 None:intergenic
GTTCATGGTGCTAATCTTCT+TGG 0.267962 1_1:-69777080 Msa0039790:CDS
TGTAACAATGACATGATATT+TGG 0.274740 1_1:+69775191 None:intergenic
TTAACAACAGCGCCTTTAAA+TGG 0.275106 1_1:+69775168 None:intergenic
CTTGTAAAATTCAATGTATC+TGG 0.289773 1_1:+69775138 None:intergenic
TGAAGAAAATTTAATTATAA+GGG 0.294452 1_1:+69777896 None:intergenic
AGGCAAAGTGAACCAGAATT+TGG 0.295595 1_1:-69775069 Msa0039790:CDS
TTAACCCTTCTATGATCTAT+TGG 0.295681 1_1:+69775681 None:intergenic
GTGAATCGTCGAAGCAAAAT+TGG 0.296323 1_1:+69775245 None:intergenic
GTACTTTGTATCTGGGAATA+TGG 0.302816 1_1:+69777472 None:intergenic
GTTAAGTTTAACATACTTTC+CGG 0.306723 1_1:-69775663 Msa0039790:CDS
ATAGCAGCTGGACTCCATTC+AGG 0.318680 1_1:+69775582 None:intergenic
GGTTCAAGACCAAGGAAATA+TGG 0.331175 1_1:+69777428 None:intergenic
GAGTCTTAGACACTGGTATT+TGG 0.332570 1_1:-69777346 Msa0039790:CDS
GTTTACCAATAGATCATAGA+AGG 0.337442 1_1:-69775686 Msa0039790:CDS
AGTTTATCTGTAGCTTCATT+TGG 0.341083 1_1:-69776392 Msa0039790:CDS
CTTTATTTCCATTGCACTGC+TGG 0.341417 1_1:-69777999 Msa0039790:five_prime_UTR
ACACCAGGTGCTACTATATC+AGG 0.364343 1_1:+69775750 None:intergenic
ACAATACCCTTTGGTTTACA+TGG 0.367797 1_1:-69776162 Msa0039790:CDS
GATGAAAATGCTGCTACTAT+AGG 0.369103 1_1:+69775810 None:intergenic
TGAACCAGAATTTGGAGGTT+TGG 0.376243 1_1:-69775061 Msa0039790:CDS
TGATCTATTGGTAAACTTGA+TGG 0.377526 1_1:+69775693 None:intergenic
CCATGACCATCTTGATCTCT+TGG 0.381927 1_1:+69777137 None:intergenic
CTTCAATCACCAACCTCTAT+AGG 0.387330 1_1:-69778077 None:intergenic
AATCTTCTTGGTTATGCCTA+TGG 0.387556 1_1:-69777068 Msa0039790:CDS
TCAGGAGCATCAATCTATAA+AGG 0.389240 1_1:-69776209 Msa0039790:CDS
GAGGTTTGGTGTGGAAAGAT+AGG 0.390179 1_1:-69775047 Msa0039790:CDS
AGTGAGAGTTTCATTGATAC+AGG 0.401477 1_1:-69777317 Msa0039790:CDS
AGGACATGACATTGAAGTTC+CGG 0.408580 1_1:+69775644 None:intergenic
CACACTGCAGCTACTGTTGC+CGG 0.410503 1_1:-69777110 Msa0039790:CDS
ATTTCAAGTGTGAGTAAACT+TGG 0.411469 1_1:+69775780 None:intergenic
GTTGCCGGATCTCCGGTTCA+TGG 0.413429 1_1:-69777095 Msa0039790:CDS
TGATCCAAGATCTTTGTGTT+TGG 0.414895 1_1:-69776120 Msa0039790:CDS
ACGGTTGATTCTTGTTGAAT+TGG 0.417625 1_1:+69778026 None:intergenic
CATTGCAATAAGAAGATTGT+AGG 0.420094 1_1:-69777230 Msa0039790:CDS
CATTCCTCTTGCTGTTCCAT+AGG 0.422540 1_1:+69777052 None:intergenic
CCTTCCAAACACAAAGATCT+TGG 0.423780 1_1:+69776116 None:intergenic
GACTTCTTGTTGTGTGTAGT+TGG 0.425321 1_1:+69777450 None:intergenic
TTCATTTGGAGCAATGGAAA+AGG 0.428283 1_1:-69776378 Msa0039790:CDS
AATTAGTCCAAGAGTGCAAA+AGG 0.429857 1_1:-69776042 Msa0039790:CDS
CATTTGGTTATAAAGTGAAA+TGG 0.430653 1_1:+69777868 None:intergenic
TTTGTGTTTGGAAGGTACTT+TGG 0.430850 1_1:-69776108 Msa0039790:CDS
CAGCAGTGCAATGGAAATAA+AGG 0.431356 1_1:+69778000 None:intergenic
GCAGAAGAAGCATCTCTAAG+AGG 0.432819 1_1:+69775510 None:intergenic
AACTTATGTTATTACAAGAA+TGG 0.435169 1_1:+69774812 None:intergenic
GGCATATATGTTATCACAAT+CGG 0.437021 1_1:+69775006 None:intergenic
AAGATTGTGATTTGTGATAG+AGG 0.446697 1_1:-69776065 Msa0039790:CDS
AGCTACTGTTGCCGGATCTC+CGG 0.449003 1_1:-69777102 Msa0039790:CDS
CCTAGAAAAGCTCTTGATCC+AGG 0.449023 1_1:-69775444 Msa0039790:CDS
TGGAAAGGTGCATGTGAAAC+TGG 0.450416 1_1:-69777272 Msa0039790:CDS
TTATCCATCTCTTTAGGTGG+TGG 0.450538 1_1:-69776437 Msa0039790:CDS
GTAACTAGTCTTGGACTCCT+AGG 0.451698 1_1:+69774964 None:intergenic
AGTTAGAAAACAATACCCTT+TGG 0.454153 1_1:-69776171 Msa0039790:CDS
TGAATACCACTCTGGGTGAC+TGG 0.456442 1_1:+69777655 None:intergenic
GCAGATGTTAGCCTTGGAAA+TGG 0.460229 1_1:-69776242 Msa0039790:CDS
TGCTGAATAGTAACTAGTCT+TGG 0.467311 1_1:+69774955 None:intergenic
AAGCTACAGATAAACTATCA+TGG 0.467658 1_1:+69776399 None:intergenic
CCTTTCCAGTGAGAAGGTAC+TGG 0.468930 1_1:+69777287 None:intergenic
ATAGTTGGAGTCTTAGACAC+TGG 0.469054 1_1:-69777353 Msa0039790:CDS
TCAGTTTCAAAGTGACATCT+AGG 0.470839 1_1:-69775089 Msa0039790:CDS
GTGTGAACATTCTTGCTGCT+TGG 0.471231 1_1:-69775731 Msa0039790:CDS
CTTACAAACACTGCAGCAAA+TGG 0.472737 1_1:-69775981 Msa0039790:CDS
TTTCCTGCAGATGTTAGCCT+TGG 0.473741 1_1:-69776248 Msa0039790:CDS
AGCACCATGAACCGGAGATC+CGG 0.473779 1_1:+69777091 None:intergenic
GCTAACCATGATGTTATAGT+TGG 0.475358 1_1:-69777368 Msa0039790:CDS
AACATTCTTGCTGCTTGGAG+TGG 0.477323 1_1:-69775726 Msa0039790:CDS
ATGTCATGTCCTCATGTAAG+TGG 0.481265 1_1:-69775633 Msa0039790:CDS
CTGTTGCTGCTTCATATCCA+TGG 0.481970 1_1:+69777192 None:intergenic
GTAGTTGGTACTTTGTATCT+GGG 0.485251 1_1:+69777465 None:intergenic
CATGGATATGAAGCAGCAAC+AGG 0.490558 1_1:-69777191 Msa0039790:CDS
GAAACATTTGTGAGACTGAC+AGG 0.491134 1_1:+69776314 None:intergenic
ATCTTCCTTGCTTGTATACA+CGG 0.491848 1_1:-69777825 Msa0039790:five_prime_UTR
CCAAGATCTTTGTGTTTGGA+AGG 0.493533 1_1:-69776116 Msa0039790:CDS
AGTATATGATATCGAACCTC+AGG 0.493737 1_1:-69775418 Msa0039790:CDS
TTTGTGAGACTGACAGGGTC+AGG 0.495230 1_1:+69776320 None:intergenic
TGGCCAGCACCATGATCATA+AGG 0.495707 1_1:+69775474 None:intergenic
TGTAGCTTCATTTGGAGCAA+TGG 0.496713 1_1:-69776384 Msa0039790:CDS
GGGTGACTGGAAAAGATGTC+TGG 0.499182 1_1:+69777668 None:intergenic
TTATTTAAGACTTAAGAGAA+AGG 0.500236 1_1:+69777947 None:intergenic
GGAAATGGAAGAAAATTCTC+AGG 0.500504 1_1:-69776227 Msa0039790:CDS
TTGGATCGTCGAACTGTCAC+GGG 0.501662 1_1:-69776089 Msa0039790:CDS
TCCAAGAGTGCAAAAGGGAC+AGG 0.505100 1_1:-69776036 Msa0039790:CDS
ACAAGAAGTCCATATTTCCT+TGG 0.505491 1_1:-69777437 Msa0039790:CDS
CACCGCACTGTTACCAATGT+TGG 0.506302 1_1:-69775225 Msa0039790:CDS
TTCAAAACACCAACAGAAGC+TGG 0.506627 1_1:-69777403 Msa0039790:CDS
AAACACAAAGATCTTGGATC+AGG 0.511063 1_1:+69776122 None:intergenic
TCATTTGGAGCAATGGAAAA+GGG 0.512583 1_1:-69776377 Msa0039790:CDS
CAGAATTTGGAGGTTTGGTG+TGG 0.515812 1_1:-69775056 Msa0039790:CDS
TAACTAGTCTTGGACTCCTA+GGG 0.518676 1_1:+69774965 None:intergenic
CAAAGTGAACCAGAATTTGG+AGG 0.522433 1_1:-69775066 Msa0039790:CDS
AGAAGATTAGCACCATGAAC+CGG 0.523555 1_1:+69777083 None:intergenic
TTTCCAAGGCTAACATCTGC+AGG 0.523747 1_1:+69776245 None:intergenic
TTTGGATCGTCGAACTGTCA+CGG 0.527993 1_1:-69776090 Msa0039790:CDS
TCAATGAAACTCTCACTCTC+AGG 0.530295 1_1:+69777323 None:intergenic
TCAAAGCTAAACATCCTGAA+TGG 0.530445 1_1:-69775596 Msa0039790:CDS
GGTTATAAAGTGAAATGGAT+AGG 0.531723 1_1:+69777873 None:intergenic
ATTAAAAGAGCTACCTATAG+AGG 0.531856 1_1:+69778064 None:intergenic
TTGTTGAATTGGTAAATTGA+AGG 0.533971 1_1:+69778037 None:intergenic
ACACCTTATGATCATGGTGC+TGG 0.538752 1_1:-69775477 Msa0039790:CDS
GGGGAAGAACTTCACATTGG+TGG 0.539133 1_1:+69774985 None:intergenic
AGGTTTGGTGTGGAAAGATA+GGG 0.539280 1_1:-69775046 Msa0039790:CDS
ATCGTCGAAGCAAAATTGGT+TGG 0.539328 1_1:+69775249 None:intergenic
GTGTATACAAGCAAGGAAGA+TGG 0.541226 1_1:+69777827 None:intergenic
GCTCCAACCGTGGTGATCCA+TGG 0.546621 1_1:+69776290 None:intergenic
GGAAACACAACTGATATAGC+AGG 0.548430 1_1:+69775279 None:intergenic
AAATGCTTCTCACACTATTG+TGG 0.548640 1_1:+69774716 None:intergenic
TGCTTCCCATGTAAACCAAA+GGG 0.549353 1_1:+69776156 None:intergenic
TTGCAGCTTACAAAGTGTGT+TGG 0.551123 1_1:-69776529 Msa0039790:CDS
AGCTACAGATAAACTATCAT+GGG 0.558604 1_1:+69776400 None:intergenic
TGTTGAATTGGTAAATTGAA+GGG 0.559566 1_1:+69778038 None:intergenic
TGAGAATCCATTAAAAGAGA+AGG 0.560660 1_1:-69774842 Msa0039790:three_prime_UTR
TCGATATCATATACTAAACC+TGG 0.561273 1_1:+69775426 None:intergenic
GACTCCACCACCTAAAGAGA+TGG 0.565490 1_1:+69776433 None:intergenic
TCACCATGGATCACCACGGT+TGG 0.567091 1_1:-69776293 Msa0039790:CDS
ACATGATATTTGGAAACAGC+AGG 0.567192 1_1:+69775201 None:intergenic
TGAAACCAGTACCTTCTCAC+TGG 0.571834 1_1:-69777292 Msa0039790:CDS
CAATGTGAAGTTCTTCCCCT+AGG 0.572767 1_1:-69774981 Msa0039790:exon
CCAAGAGATCAAGATGGTCA+TGG 0.573050 1_1:-69777137 Msa0039790:CDS
GCTTACAAAGTGTGTTGGAC+TGG 0.581550 1_1:-69776524 Msa0039790:CDS
CATTGTGCTAGCTCCAACCG+TGG 0.583490 1_1:+69776280 None:intergenic
CAATACCCTTTGGTTTACAT+GGG 0.583889 1_1:-69776161 Msa0039790:CDS
GGAAACAGCAGGACCAACAT+TGG 0.584506 1_1:+69775212 None:intergenic
TAGATAAGACTATACTCAAG+AGG 0.584910 1_1:+69777747 None:intergenic
TTTGAATTGGTTCAAGACCA+AGG 0.585704 1_1:+69777420 None:intergenic
CTACTGCTACTGCTGGAAGT+AGG 0.588254 1_1:+69775934 None:intergenic
TATGCCTATGGAACAGCAAG+AGG 0.591767 1_1:-69777056 Msa0039790:CDS
TACAAAGTGTGTTGGACTGG+TGG 0.597149 1_1:-69776521 Msa0039790:CDS
TTGCTTCCCATGTAAACCAA+AGG 0.598040 1_1:+69776155 None:intergenic
CTATGGAACAGCAAGAGGAA+TGG 0.598450 1_1:-69777051 Msa0039790:CDS
CTACTTCCAGCAGTAGCAGT+AGG 0.599375 1_1:-69775933 Msa0039790:CDS
TTAGTGTGCCAGCAGTGCAA+TGG 0.601116 1_1:+69777991 None:intergenic
AGACTCCAACTATAACATCA+TGG 0.601238 1_1:+69777363 None:intergenic
GTTGATACAGCTGTAGCTGA+TGG 0.601842 1_1:-69776470 Msa0039790:CDS
CATGCACCTTTCCAGTGAGA+AGG 0.602893 1_1:+69777281 None:intergenic
CTTAGCCGTGTATACAAGCA+AGG 0.603309 1_1:+69777820 None:intergenic
GGTGCATGTGAAACTGGTAG+AGG 0.604367 1_1:-69777266 Msa0039790:CDS
ATTAGTCCAAGAGTGCAAAA+GGG 0.604652 1_1:-69776041 Msa0039790:CDS
TTTCAAGTGTGAGTAAACTT+GGG 0.606574 1_1:+69775781 None:intergenic
AATGCTGCTACTATAGGAGA+TGG 0.611627 1_1:+69775816 None:intergenic
TTTACCAATAGATCATAGAA+GGG 0.613414 1_1:-69775685 Msa0039790:CDS
ACAGCAAGAGGAATGGCACC+AGG 0.615072 1_1:-69777044 Msa0039790:intron
CCAGTACCTTCTCACTGGAA+AGG 0.621307 1_1:-69777287 Msa0039790:CDS
TCCTCATGTAAGTGGAATCG+CGG 0.624644 1_1:-69775625 Msa0039790:CDS
GCAGCAAGAATGTTCACACC+AGG 0.640405 1_1:+69775735 None:intergenic
CACGGTTGGAGCTAGCACAA+TGG 0.640840 1_1:-69776279 Msa0039790:CDS
GTCTCACAAATGTTTCACCA+TGG 0.646444 1_1:-69776307 Msa0039790:CDS
AAACCTGATATAGTAGCACC+TGG 0.653822 1_1:-69775753 Msa0039790:CDS
AAATCACCAAGAGATCAAGA+TGG 0.659141 1_1:-69777143 Msa0039790:CDS
AACTAGTCTTGGACTCCTAG+GGG 0.659885 1_1:+69774966 None:intergenic
GGTGCAAGAATATTCTACCA+TGG 0.660702 1_1:-69777209 Msa0039790:CDS
GCAATGGAAATAAAGGTGAA+CGG 0.662242 1_1:+69778007 None:intergenic
AGAAACTCAAAGTAATCCTG+AGG 0.669990 1_1:+69775402 None:intergenic
CTAGGGGAAGAACTTCACAT+TGG 0.680242 1_1:+69774982 None:intergenic
GCCGCGATTCCACTTACATG+AGG 0.688521 1_1:+69775624 None:intergenic
AAACATTTGTGAGACTGACA+GGG 0.693774 1_1:+69776315 None:intergenic
TGTTTCACCATGGATCACCA+CGG 0.715840 1_1:-69776297 Msa0039790:CDS
GACCAACATTGGTAACAGTG+CGG 0.756399 1_1:+69775223 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TGAAGAAAATTTAATTATAA+GGG + chr1_1:69774846-69774865 None:intergenic 10.0%
!! GTGAAGAAAATTTAATTATA+AGG + chr1_1:69774847-69774866 None:intergenic 15.0%
!!! TTAACCATCTTTTATTTTTA+TGG - chr1_1:69775970-69775989 Msa0039790:CDS 15.0%
!!! TTATTTAAGACTTAAGAGAA+AGG + chr1_1:69774795-69774814 None:intergenic 20.0%
!! AAAAACTTACATCATTCATA+TGG - chr1_1:69775034-69775053 Msa0039790:CDS 20.0%
!!! CAAAATATTTTAGTAATACC+TGG + chr1_1:69775716-69775735 None:intergenic 20.0%
!!! CTTTTTTAAATTTTCCAATC+TGG + chr1_1:69775901-69775920 None:intergenic 20.0%
!!! AAACATTTTTCATTCTTTCT+AGG + chr1_1:69776086-69776105 None:intergenic 20.0%
!! AACATAAAGATAGTATTAGA+TGG + chr1_1:69776111-69776130 None:intergenic 20.0%
!! AAAAAACTACTAATTCTGAA+GGG + chr1_1:69777381-69777400 None:intergenic 20.0%
!!! TTATATACCTTCTCTTTTAA+TGG + chr1_1:69777907-69777926 None:intergenic 20.0%
!! AACTTATGTTATTACAAGAA+TGG + chr1_1:69777930-69777949 None:intergenic 20.0%
!!! ACATCTTTTTTTTTTTTTGG+TGG + chr1_1:69777980-69777999 None:intergenic 20.0%
!!! GTCACATCTTTTTTTTTTTT+TGG + chr1_1:69777983-69778002 None:intergenic 20.0%
! TGTTGAATTGGTAAATTGAA+GGG + chr1_1:69774704-69774723 None:intergenic 25.0%
! TTGTTGAATTGGTAAATTGA+AGG + chr1_1:69774705-69774724 None:intergenic 25.0%
! CATTTGGTTATAAAGTGAAA+TGG + chr1_1:69774874-69774893 None:intergenic 25.0%
!!! ACTAAGATTTTTGAAGCATT+TGG + chr1_1:69774890-69774909 None:intergenic 25.0%
! AGTTCATATGAAAATGAAGA+AGG - chr1_1:69775777-69775796 Msa0039790:CDS 25.0%
!!! CCATCTTTTATTTTTATGGA+CGG - chr1_1:69775974-69775993 Msa0039790:CDS 25.0%
!! AATGTTTTATCCATCTCTTT+AGG - chr1_1:69776296-69776315 Msa0039790:CDS 25.0%
! TTTACCAATAGATCATAGAA+GGG - chr1_1:69777054-69777073 Msa0039790:CDS 25.0%
! GTTAAGTTTAACATACTTTC+CGG - chr1_1:69777076-69777095 Msa0039790:CDS 25.0%
! GAAAAAACTACTAATTCTGA+AGG + chr1_1:69777382-69777401 None:intergenic 25.0%
! TGTAACAATGACATGATATT+TGG + chr1_1:69777551-69777570 None:intergenic 25.0%
! CTTGTAAAATTCAATGTATC+TGG + chr1_1:69777604-69777623 None:intergenic 25.0%
GGTTATAAAGTGAAATGGAT+AGG + chr1_1:69774869-69774888 None:intergenic 30.0%
! ATGCAACTCATCTTTTCAAT+GGG + chr1_1:69774957-69774976 None:intergenic 30.0%
! AATGCAACTCATCTTTTCAA+TGG + chr1_1:69774958-69774977 None:intergenic 30.0%
TAGATAAGACTATACTCAAG+AGG + chr1_1:69774995-69775014 None:intergenic 30.0%
!! AATTACAACACTGCTTTTCA+TGG - chr1_1:69775182-69775201 Msa0039790:CDS 30.0%
CATTGCAATAAGAAGATTGT+AGG - chr1_1:69775509-69775528 Msa0039790:CDS 30.0%
TGTTTAGTACAATTCCAGAT+TGG - chr1_1:69775884-69775903 Msa0039790:CDS 30.0%
CCGTCCATAAAAATAAAAGA+TGG + chr1_1:69775977-69775996 None:intergenic 30.0%
TTAACCGTGCATTATCTTTA+TGG - chr1_1:69776037-69776056 Msa0039790:CDS 30.0%
!! CTGTACATAAAGATAATGGA+TGG + chr1_1:69776181-69776200 None:intergenic 30.0%
CATCCATTATCTTTATGTAC+AGG - chr1_1:69776179-69776198 Msa0039790:CDS 30.0%
AGCTACAGATAAACTATCAT+GGG + chr1_1:69776342-69776361 None:intergenic 30.0%
AAGCTACAGATAAACTATCA+TGG + chr1_1:69776343-69776362 None:intergenic 30.0%
AGTTTATCTGTAGCTTCATT+TGG - chr1_1:69776347-69776366 Msa0039790:CDS 30.0%
! AGAATTTTCTTCCATTTCCA+AGG + chr1_1:69776511-69776530 None:intergenic 30.0%
AGTTAGAAAACAATACCCTT+TGG - chr1_1:69776568-69776587 Msa0039790:intron 30.0%
! AAGATTGTGATTTGTGATAG+AGG - chr1_1:69776674-69776693 Msa0039790:intron 30.0%
! GCTTTTCATAACACAAGATT+AGG - chr1_1:69776893-69776912 Msa0039790:intron 30.0%
! TTTCAAGTGTGAGTAAACTT+GGG + chr1_1:69776961-69776980 None:intergenic 30.0%
! ATTTCAAGTGTGAGTAAACT+TGG + chr1_1:69776962-69776981 None:intergenic 30.0%
TGATCTATTGGTAAACTTGA+TGG + chr1_1:69777049-69777068 None:intergenic 30.0%
GTTTACCAATAGATCATAGA+AGG - chr1_1:69777053-69777072 Msa0039790:CDS 30.0%
TTAACCCTTCTATGATCTAT+TGG + chr1_1:69777061-69777080 None:intergenic 30.0%
! TTTTCAACACCTTATGATCA+TGG - chr1_1:69777256-69777275 Msa0039790:CDS 30.0%
!!! GAGCTTTTCTAGGATTAATA+TGG + chr1_1:69777288-69777307 None:intergenic 30.0%
TCGATATCATATACTAAACC+TGG + chr1_1:69777316-69777335 None:intergenic 30.0%
GTCATTGTTACACCATTTAA+AGG - chr1_1:69777559-69777578 Msa0039790:CDS 30.0%
GGCATATATGTTATCACAAT+CGG + chr1_1:69777736-69777755 None:intergenic 30.0%
TGAGAATCCATTAAAAGAGA+AGG - chr1_1:69777897-69777916 Msa0039790:five_prime_UTR 30.0%
! ACGGTTGATTCTTGTTGAAT+TGG + chr1_1:69774716-69774735 None:intergenic 35.0%
GCAATGGAAATAAAGGTGAA+CGG + chr1_1:69774735-69774754 None:intergenic 35.0%
ATCTTCCTTGCTTGTATACA+CGG - chr1_1:69774914-69774933 Msa0039790:three_prime_UTR 35.0%
! CTTTTGATGAATACCACTCT+GGG + chr1_1:69775094-69775113 None:intergenic 35.0%
! ACTTTTGATGAATACCACTC+TGG + chr1_1:69775095-69775114 None:intergenic 35.0%
! AAAAAGCTAGAATCTGAAGC+TGG - chr1_1:69775236-69775255 Msa0039790:CDS 35.0%
GTACTTTGTATCTGGGAATA+TGG + chr1_1:69775270-69775289 None:intergenic 35.0%
! GTAGTTGGTACTTTGTATCT+GGG + chr1_1:69775277-69775296 None:intergenic 35.0%
! TGTAGTTGGTACTTTGTATC+TGG + chr1_1:69775278-69775297 None:intergenic 35.0%
ACAAGAAGTCCATATTTCCT+TGG - chr1_1:69775302-69775321 Msa0039790:CDS 35.0%
! TTTGAATTGGTTCAAGACCA+AGG + chr1_1:69775322-69775341 None:intergenic 35.0%
!! CTTCTGTTGGTGTTTTGAAT+TGG + chr1_1:69775335-69775354 None:intergenic 35.0%
GCTAACCATGATGTTATAGT+TGG - chr1_1:69775371-69775390 Msa0039790:CDS 35.0%
AGACTCCAACTATAACATCA+TGG + chr1_1:69775379-69775398 None:intergenic 35.0%
AGTGAGAGTTTCATTGATAC+AGG - chr1_1:69775422-69775441 Msa0039790:CDS 35.0%
AAATCACCAAGAGATCAAGA+TGG - chr1_1:69775596-69775615 Msa0039790:CDS 35.0%
AATCTTCTTGGTTATGCCTA+TGG - chr1_1:69775671-69775690 Msa0039790:CDS 35.0%
!! CATAGTTTTACCACCATACA+AGG - chr1_1:69775929-69775948 Msa0039790:CDS 35.0%
!!! TTTTTAGCTTCTGCCTTGTA+TGG + chr1_1:69775945-69775964 None:intergenic 35.0%
CTGTCCATAAAGATAATGCA+CGG + chr1_1:69776044-69776063 None:intergenic 35.0%
GCACCTGTACATAAAGATAA+TGG + chr1_1:69776185-69776204 None:intergenic 35.0%
! GTTTTATCCATCTCTTTAGG+TGG - chr1_1:69776299-69776318 Msa0039790:CDS 35.0%
! TTCATTTGGAGCAATGGAAA+AGG - chr1_1:69776361-69776380 Msa0039790:CDS 35.0%
! TCATTTGGAGCAATGGAAAA+GGG - chr1_1:69776362-69776381 Msa0039790:CDS 35.0%
!! GTTTTTGTTTCATGTTCAGC+TGG - chr1_1:69776386-69776405 Msa0039790:CDS 35.0%
AAACATTTGTGAGACTGACA+GGG + chr1_1:69776427-69776446 None:intergenic 35.0%
GGAAATGGAAGAAAATTCTC+AGG - chr1_1:69776512-69776531 Msa0039790:CDS 35.0%
!! TCAGGAGCATCAATCTATAA+AGG - chr1_1:69776530-69776549 Msa0039790:CDS 35.0%
! TTGTTTTCTAACTGAGAGCA+CGG + chr1_1:69776561-69776580 None:intergenic 35.0%
! ACAATACCCTTTGGTTTACA+TGG - chr1_1:69776577-69776596 Msa0039790:intron 35.0%
! CAATACCCTTTGGTTTACAT+GGG - chr1_1:69776578-69776597 Msa0039790:intron 35.0%
AAACACAAAGATCTTGGATC+AGG + chr1_1:69776620-69776639 None:intergenic 35.0%
TGATCCAAGATCTTTGTGTT+TGG - chr1_1:69776619-69776638 Msa0039790:intron 35.0%
!! TTTGTGTTTGGAAGGTACTT+TGG - chr1_1:69776631-69776650 Msa0039790:intron 35.0%
! AATTAGTCCAAGAGTGCAAA+AGG - chr1_1:69776697-69776716 Msa0039790:intron 35.0%
! ATTAGTCCAAGAGTGCAAAA+GGG - chr1_1:69776698-69776717 Msa0039790:intron 35.0%
GATGAAAATGCTGCTACTAT+AGG + chr1_1:69776932-69776951 None:intergenic 35.0%
TCAAAGCTAAACATCCTGAA+TGG - chr1_1:69777143-69777162 Msa0039790:CDS 35.0%
! ATTGCAGATTTTATAGCAGC+TGG + chr1_1:69777172-69777191 None:intergenic 35.0%
AGTATATGATATCGAACCTC+AGG - chr1_1:69777321-69777340 Msa0039790:CDS 35.0%
AGAAACTCAAAGTAATCCTG+AGG + chr1_1:69777340-69777359 None:intergenic 35.0%
ACATGATATTTGGAAACAGC+AGG + chr1_1:69777541-69777560 None:intergenic 35.0%
TTAACAACAGCGCCTTTAAA+TGG + chr1_1:69777574-69777593 None:intergenic 35.0%
TCAGTTTCAAAGTGACATCT+AGG - chr1_1:69777650-69777669 Msa0039790:CDS 35.0%
! TGCTGAATAGTAACTAGTCT+TGG + chr1_1:69777787-69777806 None:intergenic 35.0%
AAATGCTTCTCACACTATTG+TGG + chr1_1:69778026-69778045 None:intergenic 35.0%
CAGCAGTGCAATGGAAATAA+AGG + chr1_1:69774742-69774761 None:intergenic 40.0%
! CTTTATTTCCATTGCACTGC+TGG - chr1_1:69774740-69774759 Msa0039790:three_prime_UTR 40.0%
GTGTATACAAGCAAGGAAGA+TGG + chr1_1:69774915-69774934 None:intergenic 40.0%
!! CAACACTGCTTTTCATGGAA+TGG - chr1_1:69775187-69775206 Msa0039790:CDS 40.0%
! GACTTCTTGTTGTGTGTAGT+TGG + chr1_1:69775292-69775311 None:intergenic 40.0%
GGTTCAAGACCAAGGAAATA+TGG + chr1_1:69775314-69775333 None:intergenic 40.0%
TTCAAAACACCAACAGAAGC+TGG - chr1_1:69775336-69775355 Msa0039790:CDS 40.0%
! TTTTTCTGACCAGCTTCTGT+TGG + chr1_1:69775348-69775367 None:intergenic 40.0%
ATAGTTGGAGTCTTAGACAC+TGG - chr1_1:69775386-69775405 Msa0039790:CDS 40.0%
GAGTCTTAGACACTGGTATT+TGG - chr1_1:69775393-69775412 Msa0039790:CDS 40.0%
TCAATGAAACTCTCACTCTC+AGG + chr1_1:69775419-69775438 None:intergenic 40.0%
GGTGCAAGAATATTCTACCA+TGG - chr1_1:69775530-69775549 Msa0039790:CDS 40.0%
AGAAGATTAGCACCATGAAC+CGG + chr1_1:69775659-69775678 None:intergenic 40.0%
! GTTCATGGTGCTAATCTTCT+TGG - chr1_1:69775659-69775678 Msa0039790:CDS 40.0%
ACATATCTTCCAGCTTGCAT+GGG + chr1_1:69775867-69775886 None:intergenic 40.0%
AACATATCTTCCAGCTTGCA+TGG + chr1_1:69775868-69775887 None:intergenic 40.0%
TTGCAGCTTACAAAGTGTGT+TGG - chr1_1:69776210-69776229 Msa0039790:CDS 40.0%
TTATCCATCTCTTTAGGTGG+TGG - chr1_1:69776302-69776321 Msa0039790:CDS 40.0%
! TGTAGCTTCATTTGGAGCAA+TGG - chr1_1:69776355-69776374 Msa0039790:CDS 40.0%
TCATGTTCAGCTGGAAATTC+AGG - chr1_1:69776395-69776414 Msa0039790:CDS 40.0%
GAAACATTTGTGAGACTGAC+AGG + chr1_1:69776428-69776447 None:intergenic 40.0%
GTCTCACAAATGTTTCACCA+TGG - chr1_1:69776432-69776451 Msa0039790:CDS 40.0%
TGCTTCCCATGTAAACCAAA+GGG + chr1_1:69776586-69776605 None:intergenic 40.0%
TTGCTTCCCATGTAAACCAA+AGG + chr1_1:69776587-69776606 None:intergenic 40.0%
CCTTCCAAACACAAAGATCT+TGG + chr1_1:69776626-69776645 None:intergenic 40.0%
CCAAGATCTTTGTGTTTGGA+AGG - chr1_1:69776623-69776642 Msa0039790:intron 40.0%
CTTACAAACACTGCAGCAAA+TGG - chr1_1:69776758-69776777 Msa0039790:intron 40.0%
GTAGCAGTAGGAGAAAAAGA+AGG - chr1_1:69776818-69776837 Msa0039790:intron 40.0%
AATGCTGCTACTATAGGAGA+TGG + chr1_1:69776926-69776945 None:intergenic 40.0%
! GTAGCAGCATTTTCATCAAG+AGG - chr1_1:69776935-69776954 Msa0039790:intron 40.0%
AAACCTGATATAGTAGCACC+TGG - chr1_1:69776986-69777005 Msa0039790:intron 40.0%
AGGACATGACATTGAAGTTC+CGG + chr1_1:69777098-69777117 None:intergenic 40.0%
ATGTCATGTCCTCATGTAAG+TGG - chr1_1:69777106-69777125 Msa0039790:CDS 40.0%
GGAAACACAACTGATATAGC+AGG + chr1_1:69777463-69777482 None:intergenic 40.0%
!!! GCAAAATTGGTTGGTTTTGC+TGG + chr1_1:69777484-69777503 None:intergenic 40.0%
ATCGTCGAAGCAAAATTGGT+TGG + chr1_1:69777493-69777512 None:intergenic 40.0%
GTGAATCGTCGAAGCAAAAT+TGG + chr1_1:69777497-69777516 None:intergenic 40.0%
AGGCAAAGTGAACCAGAATT+TGG - chr1_1:69777670-69777689 Msa0039790:CDS 40.0%
CAAAGTGAACCAGAATTTGG+AGG - chr1_1:69777673-69777692 Msa0039790:CDS 40.0%
TGAACCAGAATTTGGAGGTT+TGG - chr1_1:69777678-69777697 Msa0039790:CDS 40.0%
!! AGGTTTGGTGTGGAAAGATA+GGG - chr1_1:69777693-69777712 Msa0039790:CDS 40.0%
!! TAACTAGTCTTGGACTCCTA+GGG + chr1_1:69777777-69777796 None:intergenic 40.0%
CTTAGCCGTGTATACAAGCA+AGG + chr1_1:69774922-69774941 None:intergenic 45.0%
TGAAACCAGTACCTTCTCAC+TGG - chr1_1:69775447-69775466 Msa0039790:CDS 45.0%
! TGGAAAGGTGCATGTGAAAC+TGG - chr1_1:69775467-69775486 Msa0039790:CDS 45.0%
! CTGTTGCTGCTTCATATCCA+TGG + chr1_1:69775550-69775569 None:intergenic 45.0%
CATGGATATGAAGCAGCAAC+AGG - chr1_1:69775548-69775567 Msa0039790:CDS 45.0%
CCATGACCATCTTGATCTCT+TGG + chr1_1:69775605-69775624 None:intergenic 45.0%
CCAAGAGATCAAGATGGTCA+TGG - chr1_1:69775602-69775621 Msa0039790:CDS 45.0%
TATGCCTATGGAACAGCAAG+AGG - chr1_1:69775683-69775702 Msa0039790:CDS 45.0%
!! CATTCCTCTTGCTGTTCCAT+AGG + chr1_1:69775690-69775709 None:intergenic 45.0%
CTATGGAACAGCAAGAGGAA+TGG - chr1_1:69775688-69775707 Msa0039790:CDS 45.0%
CTCTAATTTCCCATGCAAGC+TGG - chr1_1:69775855-69775874 Msa0039790:CDS 45.0%
TTAGCTTCTGCCTTGTATGG+TGG + chr1_1:69775942-69775961 None:intergenic 45.0%
GCTTACAAAGTGTGTTGGAC+TGG - chr1_1:69776215-69776234 Msa0039790:CDS 45.0%
! TACAAAGTGTGTTGGACTGG+TGG - chr1_1:69776218-69776237 Msa0039790:CDS 45.0%
GTTGATACAGCTGTAGCTGA+TGG - chr1_1:69776269-69776288 Msa0039790:CDS 45.0%
TGTTTCACCATGGATCACCA+CGG - chr1_1:69776442-69776461 Msa0039790:CDS 45.0%
! TTTCCTGCAGATGTTAGCCT+TGG - chr1_1:69776491-69776510 Msa0039790:CDS 45.0%
TTTCCAAGGCTAACATCTGC+AGG + chr1_1:69776497-69776516 None:intergenic 45.0%
!! GCAGATGTTAGCCTTGGAAA+TGG - chr1_1:69776497-69776516 Msa0039790:CDS 45.0%
TTTGGATCGTCGAACTGTCA+CGG - chr1_1:69776649-69776668 Msa0039790:intron 45.0%
GGACAGGTAGTGAAAAATGC+AGG - chr1_1:69776719-69776738 Msa0039790:intron 45.0%
CAGGTAGTGAAAAATGCAGG+AGG - chr1_1:69776722-69776741 Msa0039790:intron 45.0%
! GTGAAAAATGCAGGAGGTGT+AGG - chr1_1:69776728-69776747 Msa0039790:intron 45.0%
! TTTTCTCCTACTGCTACTGC+TGG + chr1_1:69776815-69776834 None:intergenic 45.0%
!! ACACCAGGTGCTACTATATC+AGG + chr1_1:69776992-69777011 None:intergenic 45.0%
GTGTGAACATTCTTGCTGCT+TGG - chr1_1:69777008-69777027 Msa0039790:intron 45.0%
! AACATTCTTGCTGCTTGGAG+TGG - chr1_1:69777013-69777032 Msa0039790:intron 45.0%
TCCTCATGTAAGTGGAATCG+CGG - chr1_1:69777114-69777133 Msa0039790:CDS 45.0%
!! GCAGAAGAAGCATCTCTAAG+AGG + chr1_1:69777232-69777251 None:intergenic 45.0%
ACACCTTATGATCATGGTGC+TGG - chr1_1:69777262-69777281 Msa0039790:CDS 45.0%
! CCTGGATCAAGAGCTTTTCT+AGG + chr1_1:69777298-69777317 None:intergenic 45.0%
CCTAGAAAAGCTCTTGATCC+AGG - chr1_1:69777295-69777314 Msa0039790:CDS 45.0%
! GACCAACATTGGTAACAGTG+CGG + chr1_1:69777519-69777538 None:intergenic 45.0%
CACACCAAACCTCCAAATTC+TGG + chr1_1:69777685-69777704 None:intergenic 45.0%
!! CAGAATTTGGAGGTTTGGTG+TGG - chr1_1:69777683-69777702 Msa0039790:CDS 45.0%
!! GAGGTTTGGTGTGGAAAGAT+AGG - chr1_1:69777692-69777711 Msa0039790:CDS 45.0%
CTAGGGGAAGAACTTCACAT+TGG + chr1_1:69777760-69777779 None:intergenic 45.0%
CAATGTGAAGTTCTTCCCCT+AGG - chr1_1:69777758-69777777 Msa0039790:CDS 45.0%
!! AACTAGTCTTGGACTCCTAG+GGG + chr1_1:69777776-69777795 None:intergenic 45.0%
!! GTAACTAGTCTTGGACTCCT+AGG + chr1_1:69777778-69777797 None:intergenic 45.0%
TTAGTGTGCCAGCAGTGCAA+TGG + chr1_1:69774751-69774770 None:intergenic 50.0%
GGGTGACTGGAAAAGATGTC+TGG + chr1_1:69775074-69775093 None:intergenic 50.0%
! TCTTTTCCAGTCACCCAGAG+TGG - chr1_1:69775078-69775097 Msa0039790:CDS 50.0%
TGAATACCACTCTGGGTGAC+TGG + chr1_1:69775087-69775106 None:intergenic 50.0%
! CCTTTCCAGTGAGAAGGTAC+TGG + chr1_1:69775455-69775474 None:intergenic 50.0%
CCAGTACCTTCTCACTGGAA+AGG - chr1_1:69775452-69775471 Msa0039790:CDS 50.0%
CATGCACCTTTCCAGTGAGA+AGG + chr1_1:69775461-69775480 None:intergenic 50.0%
GGTGCATGTGAAACTGGTAG+AGG - chr1_1:69775473-69775492 Msa0039790:CDS 50.0%
GACTCCACCACCTAAAGAGA+TGG + chr1_1:69776309-69776328 None:intergenic 50.0%
TTTGTGAGACTGACAGGGTC+AGG + chr1_1:69776422-69776441 None:intergenic 50.0%
TTGGATCGTCGAACTGTCAC+GGG - chr1_1:69776650-69776669 Msa0039790:intron 50.0%
! TCCAAGAGTGCAAAAGGGAC+AGG - chr1_1:69776703-69776722 Msa0039790:intron 50.0%
! ACCTGTCCCTTTTGCACTCT+TGG + chr1_1:69776707-69776726 None:intergenic 50.0%
CTACTGCTACTGCTGGAAGT+AGG + chr1_1:69776808-69776827 None:intergenic 50.0%
CTACTTCCAGCAGTAGCAGT+AGG - chr1_1:69776806-69776825 Msa0039790:intron 50.0%
GCAGCAAGAATGTTCACACC+AGG + chr1_1:69777007-69777026 None:intergenic 50.0%
ATAGCAGCTGGACTCCATTC+AGG + chr1_1:69777160-69777179 None:intergenic 50.0%
TGGCCAGCACCATGATCATA+AGG + chr1_1:69777268-69777287 None:intergenic 50.0%
CACCGCACTGTTACCAATGT+TGG - chr1_1:69777514-69777533 Msa0039790:CDS 50.0%
GGAAACAGCAGGACCAACAT+TGG + chr1_1:69777530-69777549 None:intergenic 50.0%
GGGGAAGAACTTCACATTGG+TGG + chr1_1:69777757-69777776 None:intergenic 50.0%
CACACTGCAGCTACTGTTGC+CGG - chr1_1:69775629-69775648 Msa0039790:CDS 55.0%
AGCTACTGTTGCCGGATCTC+CGG - chr1_1:69775637-69775656 Msa0039790:CDS 55.0%
AGCACCATGAACCGGAGATC+CGG + chr1_1:69775651-69775670 None:intergenic 55.0%
ACAGCAAGAGGAATGGCACC+AGG - chr1_1:69775695-69775714 Msa0039790:CDS 55.0%
TCACCATGGATCACCACGGT+TGG - chr1_1:69776446-69776465 Msa0039790:CDS 55.0%
CATTGTGCTAGCTCCAACCG+TGG + chr1_1:69776462-69776481 None:intergenic 55.0%
CACGGTTGGAGCTAGCACAA+TGG - chr1_1:69776460-69776479 Msa0039790:CDS 55.0%
! GCTGCTTGGAGTGGACTTAC+TGG - chr1_1:69777022-69777041 Msa0039790:intron 55.0%
GCCGCGATTCCACTTACATG+AGG + chr1_1:69777118-69777137 None:intergenic 55.0%
GTTGCCGGATCTCCGGTTCA+TGG - chr1_1:69775644-69775663 Msa0039790:CDS 60.0%
GCTCCAACCGTGGTGATCCA+TGG + chr1_1:69776452-69776471 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 69774676 69778085 69774676 ID=Msa0039790;Name=Msa0039790
chr1_1 mRNA 69774676 69778085 69774676 ID=Msa0039790-mRNA-1;Parent=Msa0039790;Name=Msa0039790-mRNA-1;_AED=0.01;_eAED=0.01;_QI=290|1|1|1|1|1|2|320|771
chr1_1 exon 69774676 69776560 69774676 ID=Msa0039790-mRNA-1:exon:22815;Parent=Msa0039790-mRNA-1
chr1_1 exon 69777045 69778085 69777045 ID=Msa0039790-mRNA-1:exon:22814;Parent=Msa0039790-mRNA-1
chr1_1 five_prime_UTR 69777796 69778085 69777796 ID=Msa0039790-mRNA-1:five_prime_utr;Parent=Msa0039790-mRNA-1
chr1_1 CDS 69777045 69777795 69777045 ID=Msa0039790-mRNA-1:cds;Parent=Msa0039790-mRNA-1
chr1_1 CDS 69774996 69776560 69774996 ID=Msa0039790-mRNA-1:cds;Parent=Msa0039790-mRNA-1
chr1_1 three_prime_UTR 69774676 69774995 69774676 ID=Msa0039790-mRNA-1:three_prime_utr;Parent=Msa0039790-mRNA-1
Gene Sequence

>Msa0039790

ATGAGTTGCATTCTAGCAACATGTTTCCTCTTGAGTATAGTCTTATCTACACATGCTGAATTTGTCAAAAAAACTTACATCATTCATATGGATCAATCAGCAAAACCAGACATCTTTTCCAGTCACCCAGAGTGGTATTCATCAAAAGTGAAATCAGTACTTTCTAAATCAGTAGAAGCTGAAATAGATAATAGTGAAGAAGAGAGAATCATTTACAATTACAACACTGCTTTTCATGGAATGGCTGCTAAATTAAGCACAGAAGAAGCAAAAAAGCTAGAATCTGAAGCTGGTGTTGTAGCCATATTCCCAGATACAAAGTACCAACTACACACAACAAGAAGTCCATATTTCCTTGGTCTTGAACCAATTCAAAACACCAACAGAAGCTGGTCAGAAAAACTAGCTAACCATGATGTTATAGTTGGAGTCTTAGACACTGGTATTTGGCCTGAGAGTGAGAGTTTCATTGATACAGGACTGAAACCAGTACCTTCTCACTGGAAAGGTGCATGTGAAACTGGTAGAGGATTCAGAAAACATCATTGCAATAAGAAGATTGTAGGTGCAAGAATATTCTACCATGGATATGAAGCAGCAACAGGTAAGATTGATGAGCAAGAAGATTACAAATCACCAAGAGATCAAGATGGTCATGGAACTCACACTGCAGCTACTGTTGCCGGATCTCCGGTTCATGGTGCTAATCTTCTTGGTTATGCCTATGGAACAGCAAGAGGAATGGCACCAGGTGCAAGAATTGCAGCTTACAAAGTGTGTTGGACTGGTGGATGTTTCAGCTCAGATATTCTATCAGCTGTTGATACAGCTGTAGCTGATGGAGTCAATGTTTTATCCATCTCTTTAGGTGGTGGAGTCTCATCTTACTCCCATGATAGTTTATCTGTAGCTTCATTTGGAGCAATGGAAAAGGGTGTTTTTGTTTCATGTTCAGCTGGAAATTCAGGACCTGACCCTGTCAGTCTCACAAATGTTTCACCATGGATCACCACGGTTGGAGCTAGCACAATGGATAGAGATTTTCCTGCAGATGTTAGCCTTGGAAATGGAAGAAAATTCTCAGGAGCATCAATCTATAAAGGAAAATCCGTGCTCTCAGTTAGAAAACAATACCCTTTGGTTTACATGGGAAGCAACTCAAGCAGTCCTGATCCAAGATCTTTGTGTTTGGAAGGTACTTTGGATCGTCGAACTGTCACGGGAAAGATTGTGATTTGTGATAGAGGAATTAGTCCAAGAGTGCAAAAGGGACAGGTAGTGAAAAATGCAGGAGGTGTAGGAATGATTCTTACAAACACTGCAGCAAATGGAGAAGAATTAGTAGCAGATTGTCACCTACTTCCAGCAGTAGCAGTAGGAGAAAAAGAAGGCAAAGATATCAAACAATATGTGTTAACAACTAAAAAAGCTACAGCTACATTAGCTTTTCATAACACAAGATTAGGAATTAGACCATCTCCTATAGTAGCAGCATTTTCATCAAGAGGCCCAAGTTTACTCACACTTGAAATTCTAAAACCTGATATAGTAGCACCTGGTGTGAACATTCTTGCTGCTTGGAGTGGACTTACTGGTCCATCAAGTTTACCAATAGATCATAGAAGGGTTAAGTTTAACATACTTTCCGGAACTTCAATGTCATGTCCTCATGTAAGTGGAATCGCGGCTATGATCAAAGCTAAACATCCTGAATGGAGTCCAGCTGCTATAAAATCTGCAATCATGACAACAGCTTATGTTCATGATAATACTATCAAACCTCTTAGAGATGCTTCTTCTGCTGAATTTTCAACACCTTATGATCATGGTGCTGGCCATATTAATCCTAGAAAAGCTCTTGATCCAGGTTTAGTATATGATATCGAACCTCAGGATTACTTTGAGTTTCTTTGCTCAAAGAAACTAAGCCCTTCAGAATTAGTAGTTTTTTCTAAAAATTCAAACAGAAATTGCAAACACACTCTTGCTAGTGCTAGTGACTTGAACTATCCTGCTATATCAGTTGTGTTTCCAGCAAAACCAACCAATTTTGCTTCGACGATTCACCGCACTGTTACCAATGTTGGTCCTGCTGTTTCCAAATATCATGTCATTGTTACACCATTTAAAGGCGCTGTTGTTAAAGTTGAGCCAGATACATTGAATTTTACAAGAAAATATCAGAAACTATCTTACAAGATCAGTTTCAAAGTGACATCTAGGCAAAGTGAACCAGAATTTGGAGGTTTGGTGTGGAAAGATAGGGTGCATAAAGTAAGAAGTCCGATTGTGATAACATATATGCCACCAATGTGA
Protein sequence

>Msa0039790

MSCILATCFLLSIVLSTHAEFVKKTYIIHMDQSAKPDIFSSHPEWYSSKVKSVLSKSVEAEIDNSEEERIIYNYNTAFHGMAAKLSTEEAKKLESEAGVVAIFPDTKYQLHTTRSPYFLGLEPIQNTNRSWSEKLANHDVIVGVLDTGIWPESESFIDTGLKPVPSHWKGACETGRGFRKHHCNKKIVGARIFYHGYEAATGKIDEQEDYKSPRDQDGHGTHTAATVAGSPVHGANLLGYAYGTARGMAPGARIAAYKVCWTGGCFSSDILSAVDTAVADGVNVLSISLGGGVSSYSHDSLSVASFGAMEKGVFVSCSAGNSGPDPVSLTNVSPWITTVGASTMDRDFPADVSLGNGRKFSGASIYKGKSVLSVRKQYPLVYMGSNSSSPDPRSLCLEGTLDRRTVTGKIVICDRGISPRVQKGQVVKNAGGVGMILTNTAANGEELVADCHLLPAVAVGEKEGKDIKQYVLTTKKATATLAFHNTRLGIRPSPIVAAFSSRGPSLLTLEILKPDIVAPGVNILAAWSGLTGPSSLPIDHRRVKFNILSGTSMSCPHVSGIAAMIKAKHPEWSPAAIKSAIMTTAYVHDNTIKPLRDASSAEFSTPYDHGAGHINPRKALDPGLVYDIEPQDYFEFLCSKKLSPSELVVFSKNSNRNCKHTLASASDLNYPAISVVFPAKPTNFASTIHRTVTNVGPAVSKYHVIVTPFKGAVVKVEPDTLNFTRKYQKLSYKISFKVTSRQSEPEFGGLVWKDRVHKVRSPIVITYMPPM*