AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1284520


Find 268 sgRNAs with CRISPR-Local

Find 906 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-GE

Chromosome Type Strat End Strand Name
chr8_3 gene 26910161 26924319 26910161 ID=Msa1284520;Name=Msa1284520
chr8_3 mRNA 26910161 26924319 26910161 ID=Msa1284520-mRNA-1;Parent=Msa1284520;Name=Msa1284520-mRNA-1;_AED=0.05;_eAED=0.05;_QI=118|1|0.94|1|1|1|19|419|1103
chr8_3 exon 26910161 26910657 26910161 ID=Msa1284520-mRNA-1:exon:9342;Parent=Msa1284520-mRNA-1
chr8_3 exon 26910747 26910827 26910747 ID=Msa1284520-mRNA-1:exon:9341;Parent=Msa1284520-mRNA-1
chr8_3 exon 26911208 26911315 26911208 ID=Msa1284520-mRNA-1:exon:9340;Parent=Msa1284520-mRNA-1
chr8_3 exon 26911529 26911603 26911529 ID=Msa1284520-mRNA-1:exon:9339;Parent=Msa1284520-mRNA-1
chr8_3 exon 26911702 26911821 26911702 ID=Msa1284520-mRNA-1:exon:9338;Parent=Msa1284520-mRNA-1
chr8_3 exon 26912071 26912247 26912071 ID=Msa1284520-mRNA-1:exon:9337;Parent=Msa1284520-mRNA-1
chr8_3 exon 26912343 26912459 26912343 ID=Msa1284520-mRNA-1:exon:9336;Parent=Msa1284520-mRNA-1
chr8_3 exon 26912543 26912662 26912543 ID=Msa1284520-mRNA-1:exon:9335;Parent=Msa1284520-mRNA-1
chr8_3 exon 26913694 26913765 26913694 ID=Msa1284520-mRNA-1:exon:9334;Parent=Msa1284520-mRNA-1
chr8_3 exon 26914667 26914883 26914667 ID=Msa1284520-mRNA-1:exon:9333;Parent=Msa1284520-mRNA-1
chr8_3 exon 26915687 26915799 26915687 ID=Msa1284520-mRNA-1:exon:9332;Parent=Msa1284520-mRNA-1
chr8_3 exon 26916234 26916401 26916234 ID=Msa1284520-mRNA-1:exon:9331;Parent=Msa1284520-mRNA-1
chr8_3 exon 26916478 26916618 26916478 ID=Msa1284520-mRNA-1:exon:9330;Parent=Msa1284520-mRNA-1
chr8_3 exon 26917023 26917265 26917023 ID=Msa1284520-mRNA-1:exon:9329;Parent=Msa1284520-mRNA-1
chr8_3 exon 26917348 26917425 26917348 ID=Msa1284520-mRNA-1:exon:9328;Parent=Msa1284520-mRNA-1
chr8_3 exon 26919343 26919614 26919343 ID=Msa1284520-mRNA-1:exon:9327;Parent=Msa1284520-mRNA-1
chr8_3 exon 26920415 26920989 26920415 ID=Msa1284520-mRNA-1:exon:9326;Parent=Msa1284520-mRNA-1
chr8_3 exon 26921966 26922150 26921966 ID=Msa1284520-mRNA-1:exon:9325;Parent=Msa1284520-mRNA-1
chr8_3 exon 26923830 26924319 26923830 ID=Msa1284520-mRNA-1:exon:9324;Parent=Msa1284520-mRNA-1
chr8_3 five_prime_UTR 26924202 26924319 26924202 ID=Msa1284520-mRNA-1:five_prime_utr;Parent=Msa1284520-mRNA-1
chr8_3 CDS 26923830 26924201 26923830 ID=Msa1284520-mRNA-1:cds;Parent=Msa1284520-mRNA-1
chr8_3 CDS 26921966 26922150 26921966 ID=Msa1284520-mRNA-1:cds;Parent=Msa1284520-mRNA-1
chr8_3 CDS 26920415 26920989 26920415 ID=Msa1284520-mRNA-1:cds;Parent=Msa1284520-mRNA-1
chr8_3 CDS 26919343 26919614 26919343 ID=Msa1284520-mRNA-1:cds;Parent=Msa1284520-mRNA-1
chr8_3 CDS 26917348 26917425 26917348 ID=Msa1284520-mRNA-1:cds;Parent=Msa1284520-mRNA-1
chr8_3 CDS 26917023 26917265 26917023 ID=Msa1284520-mRNA-1:cds;Parent=Msa1284520-mRNA-1
chr8_3 CDS 26916478 26916618 26916478 ID=Msa1284520-mRNA-1:cds;Parent=Msa1284520-mRNA-1
chr8_3 CDS 26916234 26916401 26916234 ID=Msa1284520-mRNA-1:cds;Parent=Msa1284520-mRNA-1
chr8_3 CDS 26915687 26915799 26915687 ID=Msa1284520-mRNA-1:cds;Parent=Msa1284520-mRNA-1
chr8_3 CDS 26914667 26914883 26914667 ID=Msa1284520-mRNA-1:cds;Parent=Msa1284520-mRNA-1
chr8_3 CDS 26913694 26913765 26913694 ID=Msa1284520-mRNA-1:cds;Parent=Msa1284520-mRNA-1
chr8_3 CDS 26912543 26912662 26912543 ID=Msa1284520-mRNA-1:cds;Parent=Msa1284520-mRNA-1
chr8_3 CDS 26912343 26912459 26912343 ID=Msa1284520-mRNA-1:cds;Parent=Msa1284520-mRNA-1
chr8_3 CDS 26912071 26912247 26912071 ID=Msa1284520-mRNA-1:cds;Parent=Msa1284520-mRNA-1
chr8_3 CDS 26911702 26911821 26911702 ID=Msa1284520-mRNA-1:cds;Parent=Msa1284520-mRNA-1
chr8_3 CDS 26911529 26911603 26911529 ID=Msa1284520-mRNA-1:cds;Parent=Msa1284520-mRNA-1
chr8_3 CDS 26911208 26911315 26911208 ID=Msa1284520-mRNA-1:cds;Parent=Msa1284520-mRNA-1
chr8_3 CDS 26910747 26910827 26910747 ID=Msa1284520-mRNA-1:cds;Parent=Msa1284520-mRNA-1
chr8_3 CDS 26910580 26910657 26910580 ID=Msa1284520-mRNA-1:cds;Parent=Msa1284520-mRNA-1
chr8_3 three_prime_UTR 26910161 26910579 26910161 ID=Msa1284520-mRNA-1:three_prime_utr;Parent=Msa1284520-mRNA-1
Gene Sequence

>Msa1284520

ATGGCTCTCAAATTTCCAAACACTTCAAACCCATTTCTTCTTTCATCATCACCACTAACCCCATCTCTTCAAAATCCTAACTTTTTCACGCTAGGCTTCAGTAACAACCGCAGAAAGCTCAAGCTTCGAGCTTCATCTACAGCAGACCCAAATGGCGCTGATGGGTCATCTTGGTCAGAGTCGTTGGACCGGGCTTCGAGGCGGTTTTTGGTGAAATATAGGGATTTGGTGAAGAAAGAGACGGGTGTTGATTTGGGAGATGGGGTTGGGAAGGTTGGTGAGTTTGTGGATGGTGTGAGGAAGGTTGGAAGTGAGTTGAAAACTCCGAGTTTGGATGAGTTTGTTGATTGGAACCGGTTCGAGAATTGGAAGAATGTCAACAACTGGGAACCTAGGCGAATCGGTGCTTTAGTTCTGTATATATTTGTTGTGGCATTTGCTTGTAGAGGAGTATTTGTAGCAATTCAAGCACCTTTCCTAAACCGCCAGAGGAAAGAGTTGACTGAAGCTTACATGGAAGCGTTAGTTCCTGAACCATCCCCGACTAACATCAGAAAATTTAAGAAGGGTATGTGGAGGAAGACAATGCCAAAAGGCCTGAAAATTAAAAAGTTTATTGAAGGACCTGATGGAACACGTGTTTATGATTCCACTTTTGTTGGAGACGATGCATCGGACGATGATCCGGAATCTTCTGATGAACATGTAAAACAAATTGTTGGGGATGAAGAAAGGTTAAACAGTGAAGAGAAGAAAGAATTAACCAAAGACCTGAAAATTAAAAAGTTTATTGAAGGACCTGATGGAACACGTGTTTATGATTCCACTTTTGTTGGAGACGATGCATCTGACGATGATCCGGAATCTTCTGATGAACATGTAAAACAAATTGTTGGGGATGAAGAAAGGTTAAACAGTGAAGAGAAGAAAGAATTAACCAAAGACCTGAAAATTAAAAAGTTTATTGAAGGACCTGATGGAACACGTGTTTATGATTCCACTTTTGTTGGAGAAGATGCATCGGACGATGATCCGGAATCTTCTGATGAACATGTAAAACAAATTGTTGGGGATGAAGAAAGGTTAAACAGTGAAGAGAAGAAAGAATTAACCAAAGACCTGGCCATCTCAGGCGAAGTTCAAACTGAGGGCACATGGCGTGAGAGACTTCATAAATGGAGGGAAATCCTTGGAAAAGAACGTCTTGTTGAGCAATTAAATTCCTTAGCCAAATATGAAGTTGATTTTGACATGAAAGAGGTTGAAAATAGTCTTCGCAAAGAAGCGGTAGAAAAGGCGAGAACCACTCAGGGAACAAGGGCTTTGTGGATAGCTAAGAGATGGTGGAGATATCGTCCTAAACTTCCTTATAATTACTTTCTTGACAAACTTGATTGTTCGGAGGTAGAAGCTGTTATCTTTACCGAAGACATGAAAAGATTATACGTGACAATGAAAGAAGGCTTCCCATTGGAATATGTTGTTGATATTCCTCTTGATCCTTATCTTTTTGAGATTATTTCGAATTCTGGAGTGGAAGTAGATCTCCTTCAGAAGCAACAAATCCATTATTTTTTCAAGGTTGCGATTGCATTTTTACCTGGAATACTAATTCTAATTCTTATGAAGCAGTCTTTGGCCCTTCTGCACATCACTTCCAGTCGTTTTATTTACAAGAAGTATAATCAACTCTTCGATATGGCTTATGCCGAAAATTTCATTCTGCCAGTTGGAGATGTTGGTGAAACAAAATCTATGTCCAAGGAAGTTGTGTTGGGAGGTGATGTTTGGGATCTGCTTGATGAGTTGATGATCTATATGAGAAATCCTATGCAGTTCTATGAAAGGGATGTGAAGTTTGTTCGGGGTGTTCTACTCTCTGGACCTCCAGGAACAGGAAAAACACTTTTTGCAAGGACACTTGCAAAACAAAGTGGACTGCCTTTTGTTTTTGCTTCTGGCGCTGAGTTCACAGATAGTGAAAAGAGTGGAGCTGCTAGGATTAACAAGATGTTCTCCCTTGCTAGGAGAAATGCACCTTGTTTTGTATTTGTGGATGAAATAGATGCCATTGCTGGAAGACATACTCGGAAGGATCCACGTAGAAAAGCAACTTTTGAGGCTCTTCTTACACAGCTTGATGGAGAGAAGGAAAAAACTGGTATTGACCGTGTATCCCTCAGACAAGCGGTCATATTTATCTGTGCCACAAATAGAGCAGATGAGTTAGATCTTGACTTTGTTCGACCTGGACGAATCGATCGTCGTCTATACATTGGTTTGCCTGATGCAGAACAAAGAATCAAAATTTTTGGTGTTCATAGTTCTGGAATGCAATTTGCAGAGGATGTGAATTTCTCAAAGCTTGTCTTCCGTACAGTTGGATTCTCTGGTGCAGATATAAGAAACCTTGTCAATGAAGCAGCAATAATGTCGGTGAGAAATGGGCATCCAAAAATATTCCAGCAAGACATTACTGATGTATTAGATAAACAACTGCTTGAGGGTATGGGTGTCCTTATCACTGAGGATGAGCAGAAGAAGTGTGAAGAAAGAGTATCTTTTGAAAAAAAGAGACTGCTTGCTGTACATGAAGCCGGTCATATTGTGCTTGCTCACTTGTTTCCTAGGTTTGATTTGCATGCATTTTCACAGCTCCTGCCCGGTGGTAAGGAAACTGCAATAACTGTTTTCAATCCTCGAGAAGATATGGTAGACCAAGGTTATACAACTTTTGGTTACTTGAAGATGCAAATGGTAGTGGCTCATGGCGGTCGATGTGCTGAACATGTTATATTTGGCGAGAATATTACTGATGGAGGAAGGGATGATCTCGAAAAGATAACAAAGATTGCTCGGGAGATGGTAATCAGCCCTCAAAATAAAAAGTTGGGGTTAATAGGTTTAACTAAAAGGGTTGGCTTAGCTGATCAACCAGATGCTTCAGATGTTGACTTGATAAAATATAGATGGGATGATCCTCAAGTAGTTCCTACAAAGATGTCAGTGGAGTTATCTGAGCTCTATACACGGGAGTTGACAAGGTACATTGAAGAGACCGAAGAACTTGCGATGAATGCTTTGAGGGATAATAAGCACATCCTAGACATGGTTGCAAGAGAACTATTGGAGAAGTCAAGAATAACTGGATTGGAGGTTGAAGAAAAAATGAAACAACTGTCTCCAGTAATGTTTGACGACTTTGTGAAGCCATTCCAAGTAGACATCGAAGAGGATGGACCATTGCCGCATAACGATGATATACACTATCGAACACCTGACTTATACCCGGCTCCTCTCCATAGATGTTAA

Protein sequence

>Msa1284520

MALKFPNTSNPFLLSSSPLTPSLQNPNFFTLGFSNNRRKLKLRASSTADPNGADGSSWSESLDRASRRFLVKYRDLVKKETGVDLGDGVGKVGEFVDGVRKVGSELKTPSLDEFVDWNRFENWKNVNNWEPRRIGALVLYIFVVAFACRGVFVAIQAPFLNRQRKELTEAYMEALVPEPSPTNIRKFKKGMWRKTMPKGLKIKKFIEGPDGTRVYDSTFVGDDASDDDPESSDEHVKQIVGDEERLNSEEKKELTKDLKIKKFIEGPDGTRVYDSTFVGDDASDDDPESSDEHVKQIVGDEERLNSEEKKELTKDLKIKKFIEGPDGTRVYDSTFVGEDASDDDPESSDEHVKQIVGDEERLNSEEKKELTKDLAISGEVQTEGTWRERLHKWREILGKERLVEQLNSLAKYEVDFDMKEVENSLRKEAVEKARTTQGTRALWIAKRWWRYRPKLPYNYFLDKLDCSEVEAVIFTEDMKRLYVTMKEGFPLEYVVDIPLDPYLFEIISNSGVEVDLLQKQQIHYFFKVAIAFLPGILILILMKQSLALLHITSSRFIYKKYNQLFDMAYAENFILPVGDVGETKSMSKEVVLGGDVWDLLDELMIYMRNPMQFYERDVKFVRGVLLSGPPGTGKTLFARTLAKQSGLPFVFASGAEFTDSEKSGAARINKMFSLARRNAPCFVFVDEIDAIAGRHTRKDPRRKATFEALLTQLDGEKEKTGIDRVSLRQAVIFICATNRADELDLDFVRPGRIDRRLYIGLPDAEQRIKIFGVHSSGMQFAEDVNFSKLVFRTVGFSGADIRNLVNEAAIMSVRNGHPKIFQQDITDVLDKQLLEGMGVLITEDEQKKCEERVSFEKKRLLAVHEAGHIVLAHLFPRFDLHAFSQLLPGGKETAITVFNPREDMVDQGYTTFGYLKMQMVVAHGGRCAEHVIFGENITDGGRDDLEKITKIAREMVISPQNKKLGLIGLTKRVGLADQPDASDVDLIKYRWDDPQVVPTKMSVELSELYTRELTRYIEETEELAMNALRDNKHILDMVARELLEKSRITGLEVEEKMKQLSPVMFDDFVKPFQVDIEEDGPLPHNDDIHYRTPDLYPAPLHRC*