AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1171340


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1171340 MtrunA17_Chr7g0266491 96.064 559 8 2 1 551 1 553 0.0 1077
Msa1171340 MtrunA17_Chr4g0003161 29.053 475 309 9 60 520 1 461 8.25e-59 203
Msa1171340 MtrunA17_Chr2g0333241 28.471 425 294 4 60 480 1 419 1.11e-56 197
Msa1171340 MtrunA17_Chr8g0350161 33.113 302 189 5 68 358 69 368 8.28e-39 145
Msa1171340 MtrunA17_Chr4g0073891 33.702 181 109 2 177 346 438 618 4.67e-25 109
Msa1171340 MtrunA17_Chr7g0253151 31.061 132 85 2 248 373 7 138 8.82e-15 72.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1171340 AT5G03940.1 80.474 548 102 3 6 551 20 564 0.0 882
Msa1171340 AT1G48900.1 29.424 469 315 9 60 520 1 461 8.20e-62 211
Msa1171340 AT1G48900.2 29.508 427 289 7 60 481 1 420 5.50e-61 207
Msa1171340 AT1G15310.1 27.862 463 304 8 60 512 1 443 1.98e-52 186
Msa1171340 AT5G49500.1 27.332 461 309 9 60 506 1 449 1.81e-51 184
Msa1171340 AT5G49500.2 29.012 324 222 5 189 506 6 327 8.69e-42 154
Msa1171340 AT2G45770.1 34.266 286 176 4 83 358 82 365 1.26e-40 151
Msa1171340 AT4G30600.2 33.702 181 109 2 177 346 441 621 1.72e-24 108
Msa1171340 AT4G30600.1 33.702 181 109 2 177 346 441 621 1.72e-24 108

Find 182 sgRNAs with CRISPR-Local

Find 431 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGAGAGGAATTTGGAGATTA+TGG 0.167511 8_1:-950987 Msa1171340:CDS
TAATTACATACATTTGATTT+TGG 0.169710 8_1:+949265 None:intergenic
TCGAGAAGCAGAGAGGAATT+TGG 0.235766 8_1:-950996 Msa1171340:CDS
AAAAGAGTTGCTCAGGATTC+AGG 0.239715 8_1:-950802 Msa1171340:CDS
CCTGGAGTTTGGTGAAATTT+AGG 0.247585 8_1:-949424 Msa1171340:three_prime_UTR
TTCTCCTTTGAGTTTGTTCC+AGG 0.251259 8_1:+955041 None:intergenic
AGGCAACCTCCTCGTGGATT+TGG 0.264733 8_1:-949619 Msa1171340:CDS
CGAAAGTCAATTCAAAATAT+TGG 0.268031 8_1:+949351 None:intergenic
CCGCGTCCTACCAACTTAAT+TGG 0.278636 8_1:+951586 None:intergenic
GGGGATTCTGCCAACAGTTC+TGG 0.296671 8_1:+950835 None:intergenic
AATCTTGAGATTGGAATAAC+TGG 0.302413 8_1:-952595 Msa1171340:CDS
AGGCTCCACAATATTGTCTT+TGG 0.320488 8_1:+954836 None:intergenic
AGCAAATTATTTCAAGAAAC+AGG 0.324652 8_1:-953999 Msa1171340:intron
TTCTACCCCGACCGAATGGC+TGG 0.326392 8_1:-951538 Msa1171340:CDS
ACTACTTTCAATCTTGAGAT+TGG 0.343939 8_1:-952604 Msa1171340:CDS
AATGACAGTGGGACCAGATT+TGG 0.346217 8_1:+954072 None:intergenic
GGCAACCTCCTCGTGGATTT+GGG 0.348400 8_1:-949618 Msa1171340:CDS
TATTGACCAGCTTACTATCT+TGG 0.348505 8_1:-953839 Msa1171340:CDS
CGAATGGCTGGGCGAATACT+AGG 0.353253 8_1:-951526 Msa1171340:CDS
CGAGTCATTGGGATGATTCC+TGG 0.363618 8_1:-951272 Msa1171340:CDS
AACTATTTCAAATGCGTGTT+CGG 0.364308 8_1:-950624 Msa1171340:CDS
TGGAGCCTATGCGAGATATT+AGG 0.368726 8_1:-954821 Msa1171340:CDS
AACTCGTACTGTTGCACAAA+TGG 0.369291 8_1:-951306 Msa1171340:CDS
TTTCTCCTCCTTGCAGTGCC+AGG 0.373193 8_1:+949682 None:intergenic
GTTCCATGATGACAGGTATC+TGG 0.374730 8_1:-951613 Msa1171340:intron
ATTTCAGCCCTGACCACAAC+TGG 0.384313 8_1:+955096 None:intergenic
ACCTTAACCAATTGTTGATC+GGG 0.385466 8_1:+954604 None:intergenic
CTGAGTTGAGTTGGTGAAGA+TGG 0.386701 8_1:-955405 Msa1171340:exon
GGTTCTGTGTCCCGAGTCAT+TGG 0.391809 8_1:-951284 Msa1171340:CDS
TGATTCGTCCAGTTGTGGTC+AGG 0.396228 8_1:-955104 Msa1171340:CDS
CTAGTATTCGCCCAGCCATT+CGG 0.398693 8_1:+951527 None:intergenic
CATCTGTCTGTCTCTTGAAC+AGG 0.400352 8_1:-949177 Msa1171340:three_prime_UTR
GCTTACTATCTTGGGTAAAC+AGG 0.402642 8_1:-953830 Msa1171340:intron
TGCACAAACCTTCTTACAAC+AGG 0.405371 8_1:+954676 None:intergenic
ATGAGTGTTGTCCTGGAGTT+TGG 0.414297 8_1:-949435 Msa1171340:three_prime_UTR
AAGAGTTGCATGCTAGTTGC+CGG 0.418576 8_1:-953883 Msa1171340:CDS
GGGAGATGTCCTTTCATTTG+TGG 0.426105 8_1:-951500 Msa1171340:CDS
TGGCTGGACTCCAGGGAGTT+GGG 0.427729 8_1:-954045 Msa1171340:CDS
ATTGACCAGCTTACTATCTT+GGG 0.431760 8_1:-953838 Msa1171340:CDS
TGTTGGCAGAATCCCCTGTT+AGG 0.440576 8_1:-950828 Msa1171340:CDS
CACCTTCCATTACACCCATT+AGG 0.440609 8_1:+950593 None:intergenic
CGAAAGAATTTCTGTAAGAA+AGG 0.442635 8_1:+955279 None:intergenic
TTAGTTCTAATTCTGCATAC+AGG 0.442859 8_1:+949208 None:intergenic
TCGGTACCTGCTGTATATAC+AGG 0.444563 8_1:+953364 None:intergenic
AGAAGAAGAGGAGGAGGAGA+AGG 0.448387 8_1:+955331 None:intergenic
TGATGAACTTGTACAATTGA+TGG 0.450286 8_1:-954122 Msa1171340:CDS
TGTGCAATCTGTTACCGATC+AGG 0.450503 8_1:-954659 Msa1171340:CDS
TATAGTAATGAGTGTTGTCC+TGG 0.453706 8_1:-949442 Msa1171340:three_prime_UTR
GTAGTAGTACTGAGTTGAGT+TGG 0.454449 8_1:-955414 Msa1171340:five_prime_UTR
ACCATCTAGCTTTGTCAAGA+TGG 0.456368 8_1:+952570 None:intergenic
TTGTTTATTTCCAGAGGAAA+GGG 0.462852 8_1:-950863 Msa1171340:intron
ATGAGTTAAAAGATGTGAAA+CGG 0.463351 8_1:-953117 Msa1171340:CDS
ATGTTTGGTCAGTTAACTAC+TGG 0.464315 8_1:-955075 Msa1171340:CDS
ATCTGTTACCGATCAGGCTG+TGG 0.465911 8_1:-954653 Msa1171340:CDS
TCAAAACTATAAATGAATCA+AGG 0.466958 8_1:+949306 None:intergenic
GAAATAGTTGAGCTACAAGT+TGG 0.467353 8_1:+950638 None:intergenic
TTCAGGGAAAACAGAGCAGC+AGG 0.469594 8_1:-950785 Msa1171340:intron
TTGGCTGGACTCCAGGGAGT+TGG 0.470608 8_1:-954046 Msa1171340:CDS
ATTCGCCCAGCCATTCGGTC+GGG 0.474602 8_1:+951532 None:intergenic
GTGGTCAGGGCTGAAATGTT+TGG 0.475946 8_1:-955090 Msa1171340:CDS
ACCCGATCAACAATTGGTTA+AGG 0.476728 8_1:-954605 Msa1171340:intron
GACCTTAACCAATTGTTGAT+CGG 0.476809 8_1:+954603 None:intergenic
GAGAGAGAGGCGTCGACAAA+TGG 0.477474 8_1:+955363 None:intergenic
GTCCATACCTTTGCCATACC+AGG 0.477722 8_1:+951254 None:intergenic
GAAGAACCTAATGGGTGTAA+TGG 0.479055 8_1:-950599 Msa1171340:CDS
ATTGATGGGTGGAGAGGTCT+CGG 0.479082 8_1:-954107 Msa1171340:CDS
AAATGTATGTAATTATGAAA+AGG 0.479872 8_1:-949257 Msa1171340:three_prime_UTR
AAAGAGTTGCTCAGGATTCA+GGG 0.481124 8_1:-950801 Msa1171340:CDS
AGCACTTAAGACAGAGGAAA+AGG 0.481940 8_1:-950539 Msa1171340:intron
ACAACTAACAAGACTTCTGT+TGG 0.482412 8_1:+953085 None:intergenic
TGTTCGGATGAAGAACCTAA+TGG 0.483285 8_1:-950608 Msa1171340:CDS
TAGGAGGAAAAGAGTTGCTC+AGG 0.484363 8_1:-950809 Msa1171340:CDS
GCCATTCGGTCGGGGTAGAA+AGG 0.484456 8_1:+951541 None:intergenic
TGTCCTTTCATTTGTGGAGA+AGG 0.486581 8_1:-951494 Msa1171340:CDS
ACAGATAGACAAAGCAATGA+TGG 0.487229 8_1:-953140 Msa1171340:intron
CTTGTTTATTTCCAGAGGAA+AGG 0.488526 8_1:-950864 Msa1171340:intron
TGAGTTAAAAGATGTGAAAC+GGG 0.488586 8_1:-953116 Msa1171340:CDS
GGCTGGGCGAATACTAGGAA+TGG 0.491731 8_1:-951521 Msa1171340:CDS
CATTGGGATGATTCCTGGTA+TGG 0.493705 8_1:-951267 Msa1171340:CDS
AGTCAAACCCGATCAACAAT+TGG 0.494660 8_1:-954611 Msa1171340:CDS
ACTCGTACTGTTGCACAAAT+GGG 0.495670 8_1:-951305 Msa1171340:CDS
CTACTGGTCTTGAATCTGCC+TGG 0.496338 8_1:-955059 Msa1171340:CDS
TAAGTCTTCCTGTTGTAAGA+AGG 0.496852 8_1:-954684 Msa1171340:CDS
AACAGAAGTCTTGTTAGTTG+TGG 0.499790 8_1:-953083 Msa1171340:CDS
TTTGAAATGCATATATTGGA+TGG 0.502839 8_1:-949288 Msa1171340:three_prime_UTR
ACCGATCAGGCTGTGGGTGT+TGG 0.504964 8_1:-954646 Msa1171340:CDS
AGAGTTGCATGCTAGTTGCC+GGG 0.509180 8_1:-953882 Msa1171340:CDS
TTCTTACAGAAATTCTTTCG+CGG 0.510015 8_1:-955276 Msa1171340:intron
TCTGCTTCTCGAATTTGAGC+AGG 0.510234 8_1:+951007 None:intergenic
GTTCGGATGAAGAACCTAAT+GGG 0.510846 8_1:-950607 Msa1171340:CDS
TGCCTATATCAGGCTCCACC+TGG 0.515675 8_1:-949700 Msa1171340:intron
GTGGTTATTGTTGACACTGC+TGG 0.517304 8_1:-953280 Msa1171340:CDS
AAGCGTAACTGTGAGAAGAA+TGG 0.518182 8_1:-955130 Msa1171340:CDS
GCCATCTTGACAAAGCTAGA+TGG 0.519028 8_1:-952571 Msa1171340:CDS
CGGTTGTCTTCCCAACTCCC+TGG 0.520103 8_1:+954035 None:intergenic
GTATGTAATTATGAAAAGGA+TGG 0.520684 8_1:-949253 Msa1171340:three_prime_UTR
TTAGTTGTGGATGCTATGAC+AGG 0.524157 8_1:-953070 Msa1171340:CDS
TCCTCAAGATTACTAAGTGT+TGG 0.525137 8_1:+950562 None:intergenic
CCAATTAAGTTGGTAGGACG+CGG 0.525708 8_1:-951586 Msa1171340:CDS
CTCCTCCTTGCAGTGCCAGG+TGG 0.527092 8_1:+949685 None:intergenic
ATCTGGAAAGCCAATTAAGT+TGG 0.532188 8_1:-951596 Msa1171340:CDS
GAAAGAATTTCTGTAAGAAA+GGG 0.533546 8_1:+955280 None:intergenic
GATTCGTCCAGTTGTGGTCA+GGG 0.534044 8_1:-955103 Msa1171340:CDS
CCTTGTTTAGCAATGTCTGA+TGG 0.535641 8_1:+953334 None:intergenic
GCTGGGCGAATACTAGGAAT+GGG 0.537490 8_1:-951520 Msa1171340:CDS
ATTTGCTAACTTTGCACACA+CGG 0.543445 8_1:+954015 None:intergenic
ATAGTCCAGTTTGGCAGTTG+TGG 0.544481 8_1:-955480 None:intergenic
GGTAGGACGCGGGGAACGCA+TGG 0.546745 8_1:-951575 Msa1171340:CDS
TCCAACACCCACAGCCTGAT+CGG 0.547331 8_1:+954645 None:intergenic
ATTGACATGCAACAATATGA+TGG 0.551838 8_1:-949568 Msa1171340:three_prime_UTR
CCTAAATTTCACCAAACTCC+AGG 0.553319 8_1:+949424 None:intergenic
CCATCAGACATTGCTAAACA+AGG 0.553327 8_1:-953334 Msa1171340:CDS
GAGAGGCGTCGACAAATGGC+GGG 0.554493 8_1:+955367 None:intergenic
CAGGAATCATCCCAATGACT+CGG 0.557170 8_1:+951273 None:intergenic
ATGACAGGGCAAGAAGCAGC+AGG 0.557985 8_1:-953055 Msa1171340:intron
TTCGCCCAGCCATTCGGTCG+GGG 0.560357 8_1:+951533 None:intergenic
ACCTTTCTACCCCGACCGAA+TGG 0.561059 8_1:-951542 Msa1171340:CDS
TCTACCCCGACCGAATGGCT+GGG 0.561326 8_1:-951537 Msa1171340:CDS
TGACACTGCTGGTAGGCTGC+AGG 0.561863 8_1:-953269 Msa1171340:intron
CAAAACTATAAATGAATCAA+GGG 0.563295 8_1:+949307 None:intergenic
GTAAGCTGGTCAATAGCAGC+AGG 0.564367 8_1:+953847 None:intergenic
AATTTGGATCAACATGTCAC+TGG 0.568531 8_1:-949535 Msa1171340:three_prime_UTR
TATTCGCCCAGCCATTCGGT+CGG 0.569867 8_1:+951531 None:intergenic
TGAATCGATCTAACAATGGA+AGG 0.573224 8_1:+949469 None:intergenic
AAGGGAAAAGCCAGAACTGT+TGG 0.573499 8_1:-950845 Msa1171340:CDS
TTTGACCAAAGACAATATTG+TGG 0.573841 8_1:-954841 Msa1171340:CDS
GGAGAAAGAAAGCAGAGTCA+AGG 0.579685 8_1:-949666 Msa1171340:CDS
GTGCCTTCTCCACAAATGAA+AGG 0.579893 8_1:+951491 None:intergenic
AGTCAATTCAAAATATTGGA+TGG 0.581427 8_1:+949355 None:intergenic
AGGCTCCACCTGGCACTGCA+AGG 0.582090 8_1:-949690 Msa1171340:CDS
AAGAGACAGACAGATGATGC+AGG 0.582560 8_1:+949184 None:intergenic
AGCAGGTCTATAAACATCCC+CGG 0.585086 8_1:+953864 None:intergenic
AGAGTCAAGGAGGTTATTTG+CGG 0.586249 8_1:-949653 Msa1171340:CDS
TGGAACAAACTCAAAGGAGA+AGG 0.586363 8_1:-955039 Msa1171340:intron
AGAGAGGCGTCGACAAATGG+CGG 0.588145 8_1:+955366 None:intergenic
GATGAACTTGTACAATTGAT+GGG 0.589831 8_1:-954121 Msa1171340:CDS
GCCAACACTTAGTAATCTTG+AGG 0.591019 8_1:-950563 Msa1171340:CDS
TTATTGTTGACACTGCTGGT+AGG 0.592237 8_1:-953276 Msa1171340:CDS
AAGGTTCGATGATGAGAGAG+AGG 0.594453 8_1:+955350 None:intergenic
GGAAAGCCAATTAAGTTGGT+AGG 0.595007 8_1:-951592 Msa1171340:CDS
GGATATGATTCGTCCAGTTG+TGG 0.595288 8_1:-955109 Msa1171340:CDS
CAATTAAGTTGGTAGGACGC+GGG 0.595793 8_1:-951585 Msa1171340:CDS
AGCAGCTTTGAGTGTCAAAG+AGG 0.598337 8_1:-952533 Msa1171340:intron
TTGACATGCAACAATATGAT+GGG 0.598344 8_1:-949567 Msa1171340:three_prime_UTR
AACCTAATGGGTGTAATGGA+AGG 0.598961 8_1:-950595 Msa1171340:CDS
GACGTCCCTGTATATACAGC+AGG 0.602587 8_1:-953370 Msa1171340:CDS
CGGTACCTGCTGTATATACA+GGG 0.602823 8_1:+953365 None:intergenic
GTTCTGTGTCCCGAGTCATT+GGG 0.606542 8_1:-951283 Msa1171340:CDS
CAGAAATGAGATGTACGTGC+GGG 0.606982 8_1:-949401 Msa1171340:three_prime_UTR
TCTGTTACCGATCAGGCTGT+GGG 0.610240 8_1:-954652 Msa1171340:CDS
CTAGATGGTGATTCAAGAGG+TGG 0.610528 8_1:-952556 Msa1171340:CDS
TGGCAGAATCCCCTGTTAGG+AGG 0.611355 8_1:-950825 Msa1171340:CDS
AGGAATCATCCCAATGACTC+GGG 0.615306 8_1:+951274 None:intergenic
ATAATAGAAGCAATGACCCC+TGG 0.615476 8_1:-950959 Msa1171340:intron
TTTATAAACAGATAATGCAC+AGG 0.617858 8_1:+949103 None:intergenic
GTGGGTGTTGGAGTCACTCG+AGG 0.626313 8_1:-954634 Msa1171340:CDS
TGTACAATTGATGGGTGGAG+AGG 0.626360 8_1:-954113 Msa1171340:CDS
TGAATGAATCGATCTAACAA+TGG 0.627827 8_1:+949465 None:intergenic
ACGTCAAGGCAACCTCCTCG+TGG 0.630526 8_1:-949625 Msa1171340:CDS
GATGATTCCTGGTATGGCAA+AGG 0.630568 8_1:-951261 Msa1171340:intron
GTTTACCCAAGATAGTAAGC+TGG 0.632085 8_1:+953833 None:intergenic
TCTGCCTGGAACAAACTCAA+AGG 0.633411 8_1:-955045 Msa1171340:CDS
AAGCTAGATGGTGATTCAAG+AGG 0.639369 8_1:-952559 Msa1171340:CDS
CTCCACCTGGCACTGCAAGG+AGG 0.641190 8_1:-949687 Msa1171340:CDS
CTAATGGGTGTAATGGAAGG+TGG 0.643784 8_1:-950592 Msa1171340:CDS
GCTCTCCTAATATCTCGCAT+AGG 0.645965 8_1:+954816 None:intergenic
CCAGCCAATAAAATGACAGT+GGG 0.646812 8_1:+954061 None:intergenic
CTCAAATTCGAGAAGCAGAG+AGG 0.649334 8_1:-951003 Msa1171340:CDS
TTGCTCCCAAATCCACGAGG+AGG 0.650329 8_1:+949613 None:intergenic
GATGCAACAAGAAGATGCTG+AGG 0.655115 8_1:-951384 Msa1171340:CDS
GAGTTGCATGCTAGTTGCCG+GGG 0.661574 8_1:-953881 Msa1171340:CDS
TGAGGAAGCACTTAAGACAG+AGG 0.664134 8_1:-950545 Msa1171340:CDS
AATTAAGTTGGTAGGACGCG+GGG 0.665000 8_1:-951584 Msa1171340:CDS
GCAGAAATGAGATGTACGTG+CGG 0.668500 8_1:-949402 Msa1171340:three_prime_UTR
GAAAGAAAGCAGAGTCAAGG+AGG 0.669836 8_1:-949663 Msa1171340:CDS
AATGTCTGATGGTTTAACAT+CGG 0.671775 8_1:+953345 None:intergenic
TCCAGCCAATAAAATGACAG+TGG 0.677478 8_1:+954060 None:intergenic
TATTTGCGGACTCAACGTCA+AGG 0.678247 8_1:-949639 Msa1171340:CDS
GACATGCAACAATATGATGG+GGG 0.693124 8_1:-949565 Msa1171340:three_prime_UTR
TGACATGCAACAATATGATG+GGG 0.701808 8_1:-949566 Msa1171340:three_prime_UTR
GAACTTGTACAATTGATGGG+TGG 0.725839 8_1:-954118 Msa1171340:CDS
TAGTTGTGGATGCTATGACA+GGG 0.765406 8_1:-953069 Msa1171340:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTAGGAAAAAATATAAT+TGG - chr8_1:950043-950062 Msa1171340:intron 10.0%
!!! TTTTAGGAAAAAATATAATT+GGG - chr8_1:950044-950063 Msa1171340:intron 10.0%
!!! ATTCTTATTTTTTAACAAAT+TGG - chr8_1:951004-951023 Msa1171340:CDS 10.0%
!!! TAATTTAAGACTTATAATTT+GGG + chr8_1:952257-952276 None:intergenic 10.0%
!!! ATAATTTAAGACTTATAATT+TGG + chr8_1:952258-952277 None:intergenic 10.0%
!! ATAAGTCTTAAATTATAATT+AGG - chr8_1:952262-952281 Msa1171340:intron 10.0%
!! AAATAAAATATATAAGAGAA+AGG + chr8_1:952871-952890 None:intergenic 10.0%
!!! TCTTATATATTTTATTTGAT+TGG - chr8_1:952874-952893 Msa1171340:intron 10.0%
!!! CTTATATATTTTATTTGATT+GGG - chr8_1:952875-952894 Msa1171340:intron 10.0%
!! CATGTATTTAAAAAAATAAA+TGG - chr8_1:955461-955480 Msa1171340:five_prime_UTR 10.0%
!!! TTTTTTAATGATCATATCAT+TGG + chr8_1:949566-949585 None:intergenic 15.0%
!!! ATTTTGTTCTTGTTTTTTTT+AGG - chr8_1:950028-950047 Msa1171340:intron 15.0%
!!! ATAAACTGATTCTAAATTAA+TGG - chr8_1:951561-951580 Msa1171340:CDS 15.0%
!!! AATCACATTTTGTAAATTAA+CGG + chr8_1:952150-952169 None:intergenic 15.0%
!! AAAGAGTAATAAATAGTTAA+GGG - chr8_1:952350-952369 Msa1171340:intron 15.0%
!! TTTATAAATAAGAATTAAGG+TGG - chr8_1:952488-952507 Msa1171340:intron 15.0%
!!! TCACATTATAGTTTTTAATA+TGG + chr8_1:952819-952838 None:intergenic 15.0%
!! GTAATAAGTAGAAATATTTA+GGG + chr8_1:953300-953319 None:intergenic 15.0%
!! TGTAATAAGTAGAAATATTT+AGG + chr8_1:953301-953320 None:intergenic 15.0%
!! AAAAATAATTAATGTTGTCT+TGG - chr8_1:954254-954273 Msa1171340:intron 15.0%
!!! TAATTACATACATTTGATTT+TGG + chr8_1:955251-955270 None:intergenic 15.0%
!! AAATGTATGTAATTATGAAA+AGG - chr8_1:955256-955275 Msa1171340:intron 15.0%
!!! ATGATATTTTCAATAATTTC+TGG + chr8_1:955444-955463 None:intergenic 15.0%
!! TGATAGATAAGATACTAATT+TGG - chr8_1:949316-949335 Msa1171340:three_prime_UTR 20.0%
!! TTTAATGTAATTACATGTGT+CGG - chr8_1:949597-949616 Msa1171340:exon 20.0%
!!! ATTATGAGTTTTAACTGATT+TGG - chr8_1:949750-949769 Msa1171340:intron 20.0%
!!! AATTTTTGTATAGTTTTCGT+AGG - chr8_1:949773-949792 Msa1171340:intron 20.0%
!! TACATAAAACATAACACAAA+TGG + chr8_1:949977-949996 None:intergenic 20.0%
!! ACAAATATACATTCATTTGT+GGG + chr8_1:950230-950249 None:intergenic 20.0%
!!! AACCAAAAAAAAGTATTAGA+AGG + chr8_1:950563-950582 None:intergenic 20.0%
!!! TTTTTTAACAAATTGGATTC+AGG - chr8_1:951011-951030 Msa1171340:CDS 20.0%
!!! CATATATTTTACTACCAAAT+TGG - chr8_1:951600-951619 Msa1171340:CDS 20.0%
!!! CTAACTAAAATATGGTTTTT+TGG + chr8_1:951785-951804 None:intergenic 20.0%
!!! CAAAAAACCATATTTTAGTT+AGG - chr8_1:951783-951802 Msa1171340:intron 20.0%
!! ACAAAAACCTAACTAAAATA+TGG + chr8_1:951793-951812 None:intergenic 20.0%
!!! ATCACATTTTGTAAATTAAC+GGG + chr8_1:952149-952168 None:intergenic 20.0%
!!! AGAAGGATGATAATTTTTTT+TGG + chr8_1:952189-952208 None:intergenic 20.0%
!! ACAAAATTATCCTTCATTAA+TGG - chr8_1:952294-952313 Msa1171340:intron 20.0%
!! GAAAGAGTAATAAATAGTTA+AGG - chr8_1:952349-952368 Msa1171340:intron 20.0%
!!! TAAATAGTTAAGGGTATTAT+AGG - chr8_1:952359-952378 Msa1171340:intron 20.0%
!! ATGTAACATTAATGTTTCAA+TGG - chr8_1:952384-952403 Msa1171340:intron 20.0%
!!! GGCTTTATAAATAAGAATTA+AGG - chr8_1:952485-952504 Msa1171340:intron 20.0%
!! GTATTGAAATGAAAAATTGA+AGG + chr8_1:952623-952642 None:intergenic 20.0%
!! TTAATATGGTTTAGAAACAT+AGG + chr8_1:952805-952824 None:intergenic 20.0%
!! TTATTACAGTTTCATGTATT+TGG - chr8_1:953313-953332 Msa1171340:CDS 20.0%
!! TGCAAATATATAATCAAAAC+TGG + chr8_1:953449-953468 None:intergenic 20.0%
!! AATACTTATAATGTGATAGA+AGG + chr8_1:954047-954066 None:intergenic 20.0%
!!! AGTAAGACATATTTTTTTGA+CGG - chr8_1:954130-954149 Msa1171340:CDS 20.0%
!! GGAAATTACATTAAGATAAT+AGG + chr8_1:954517-954536 None:intergenic 20.0%
!!! ATTAACTTTTTAAACAAGGA+AGG + chr8_1:954538-954557 None:intergenic 20.0%
!!! TCCTTGTTTAAAAAGTTAAT+TGG - chr8_1:954538-954557 Msa1171340:intron 20.0%
!!! TCCAATTAACTTTTTAAACA+AGG + chr8_1:954542-954561 None:intergenic 20.0%
!!! GAAGGAAATTATTTTATCTA+AGG + chr8_1:955029-955048 None:intergenic 20.0%
!! CAAAACTATAAATGAATCAA+GGG + chr8_1:955209-955228 None:intergenic 20.0%
!! TCAAAACTATAAATGAATCA+AGG + chr8_1:955210-955229 None:intergenic 20.0%
!!! TAGTTTTGAAATGCATATAT+TGG - chr8_1:955221-955240 Msa1171340:intron 20.0%
! GAAAGAATTTCTGTAAGAAA+GGG + chr8_1:949236-949255 None:intergenic 25.0%
! GTATCTTATCTATCAATGAA+TGG + chr8_1:949311-949330 None:intergenic 25.0%
! GATAAGATACTAATTTGGTT+TGG - chr8_1:949321-949340 Msa1171340:three_prime_UTR 25.0%
! TATATTCAAAACTACTGCAA+TGG - chr8_1:950103-950122 Msa1171340:intron 25.0%
! CAAATATACATTCATTTGTG+GGG + chr8_1:950229-950248 None:intergenic 25.0%
! CACAAATATACATTCATTTG+TGG + chr8_1:950231-950250 None:intergenic 25.0%
! CACAAATGAATGTATATTTG+TGG - chr8_1:950229-950248 Msa1171340:intron 25.0%
! AGCAAATTATTTCAAGAAAC+AGG - chr8_1:950514-950533 Msa1171340:intron 25.0%
!!! CACCTTCTAATACTTTTTTT+TGG - chr8_1:950558-950577 Msa1171340:CDS 25.0%
! GAATATGATTCGTTTCAATA+AGG + chr8_1:950595-950614 None:intergenic 25.0%
! ACTTCAATGAAACAAAAATC+TGG + chr8_1:950711-950730 None:intergenic 25.0%
! TGACTGACTATATTTAAATG+AGG + chr8_1:950770-950789 None:intergenic 25.0%
! TGTCTGGATAAAAATTATGA+AGG - chr8_1:950959-950978 Msa1171340:intron 25.0%
!! AATTAGTTATAGCTTGTATC+AGG - chr8_1:951118-951137 Msa1171340:intron 25.0%
!! CACATCAATTTTCTTCTTTT+TGG + chr8_1:951216-951235 None:intergenic 25.0%
! CAAAAAGAAGAAAATTGATG+TGG - chr8_1:951214-951233 Msa1171340:intron 25.0%
!! AAATTCTTTTATGCTCATCA+AGG - chr8_1:951333-951352 Msa1171340:CDS 25.0%
! ATGAGTTAAAAGATGTGAAA+CGG - chr8_1:951396-951415 Msa1171340:intron 25.0%
!!! TATGGTTTTTTGGTTTCTAA+AGG + chr8_1:951775-951794 None:intergenic 25.0%
! TATAATTATGTTCCTGATGT+TGG - chr8_1:951812-951831 Msa1171340:intron 25.0%
!! AAAACAGTGAAGTAGATTTT+GGG + chr8_1:951865-951884 None:intergenic 25.0%
!! TAAAACAGTGAAGTAGATTT+TGG + chr8_1:951866-951885 None:intergenic 25.0%
!!! TATTTTTGATTGAACAGCTT+TGG - chr8_1:951884-951903 Msa1171340:intron 25.0%
! TTATCCTTCATTAATGGTAT+AGG - chr8_1:952300-952319 Msa1171340:intron 25.0%
!! TTTTCCTATACCATTAATGA+AGG + chr8_1:952307-952326 None:intergenic 25.0%
! AGGTAAAACATCAAATTCAA+TGG + chr8_1:952715-952734 None:intergenic 25.0%
!! TTGATGTTTTACCTTCAAAA+TGG - chr8_1:952721-952740 Msa1171340:intron 25.0%
!! AAATTTTATGATACTCTCTG+TGG - chr8_1:952752-952771 Msa1171340:intron 25.0%
! ATAATCAAAACTGGAAAGAT+AGG + chr8_1:953440-953459 None:intergenic 25.0%
! TTAGTATAAAGAAACAACCA+GGG + chr8_1:953574-953593 None:intergenic 25.0%
! ATTAGTATAAAGAAACAACC+AGG + chr8_1:953575-953594 None:intergenic 25.0%
! AAATACACAACTATAATGTC+AGG - chr8_1:953848-953867 Msa1171340:CDS 25.0%
! TATGTCTTACTCTTTAGTAA+AGG + chr8_1:954121-954140 None:intergenic 25.0%
! TTAATTAGAGTAGTTGAAAG+TGG - chr8_1:954176-954195 Msa1171340:intron 25.0%
!! ATGAAATAAAGTACTATCTC+TGG + chr8_1:954341-954360 None:intergenic 25.0%
! TATTAAGATTCCACAAACAT+GGG - chr8_1:954573-954592 Msa1171340:intron 25.0%
! TACAACAAGATTCACAATAA+TGG + chr8_1:954738-954757 None:intergenic 25.0%
! AGTCAATTCAAAATATTGGA+TGG + chr8_1:955161-955180 None:intergenic 25.0%
! CGAAAGTCAATTCAAAATAT+TGG + chr8_1:955165-955184 None:intergenic 25.0%
!! TTTGAAATGCATATATTGGA+TGG - chr8_1:955225-955244 Msa1171340:intron 25.0%
! GTATGTAATTATGAAAAGGA+TGG - chr8_1:955260-955279 Msa1171340:intron 25.0%
!!! CTTGTAGAGTGTTTTATTTT+AGG - chr8_1:955361-955380 Msa1171340:CDS 25.0%
! TTTATAAACAGATAATGCAC+AGG + chr8_1:955413-955432 None:intergenic 25.0%
CGAAAGAATTTCTGTAAGAA+AGG + chr8_1:949237-949256 None:intergenic 30.0%
TTCTTACAGAAATTCTTTCG+CGG - chr8_1:949237-949256 Msa1171340:three_prime_UTR 30.0%
CTTATCTATCAATGAATGGA+GGG + chr8_1:949307-949326 None:intergenic 30.0%
TCTTATCTATCAATGAATGG+AGG + chr8_1:949308-949327 None:intergenic 30.0%
!! GATACTAATTTGGTTTGGTT+TGG - chr8_1:949326-949345 Msa1171340:three_prime_UTR 30.0%
! TTTGGTTTCAGAAAGAGATA+TGG - chr8_1:949344-949363 Msa1171340:three_prime_UTR 30.0%
TTGGTTTCAGAAAGAGATAT+GGG - chr8_1:949345-949364 Msa1171340:three_prime_UTR 30.0%
GTCAAATTGAAGACATGTTT+GGG + chr8_1:949635-949654 None:intergenic 30.0%
AGTCAAATTGAAGACATGTT+TGG + chr8_1:949636-949655 None:intergenic 30.0%
AACATGTCTTCAATTTGACT+TGG - chr8_1:949636-949655 Msa1171340:CDS 30.0%
TTTGACCAAAGACAATATTG+TGG - chr8_1:949672-949691 Msa1171340:CDS 30.0%
ATATTGTTCACCGTATAAAG+TGG - chr8_1:950197-950216 Msa1171340:intron 30.0%
AGTTCCATACAAGAACAAAA+TGG - chr8_1:950337-950356 Msa1171340:intron 30.0%
GTTCCATACAAGAACAAAAT+GGG - chr8_1:950338-950357 Msa1171340:intron 30.0%
TGATGAACTTGTACAATTGA+TGG - chr8_1:950391-950410 Msa1171340:intron 30.0%
GATGAACTTGTACAATTGAT+GGG - chr8_1:950392-950411 Msa1171340:intron 30.0%
! AAAGTATTAGAAGGTGATGA+AGG + chr8_1:950554-950573 None:intergenic 30.0%
AATCATATTCATCTGATCTC+AGG - chr8_1:950605-950624 Msa1171340:CDS 30.0%
ATCATATTCATCTGATCTCA+GGG - chr8_1:950606-950625 Msa1171340:CDS 30.0%
AGACAGATCATTAAAATCAG+TGG + chr8_1:950944-950963 None:intergenic 30.0%
!! ACTGATTTTAATGATCTGTC+TGG - chr8_1:950943-950962 Msa1171340:intron 30.0%
ATGAGTCAAACAATGCTAAT+TGG + chr8_1:951053-951072 None:intergenic 30.0%
AATGTCTGATGGTTTAACAT+CGG + chr8_1:951171-951190 None:intergenic 30.0%
TGAGTTAAAAGATGTGAAAC+GGG - chr8_1:951397-951416 Msa1171340:intron 30.0%
! ACTGATTCTAAATTAATGGC+TGG - chr8_1:951565-951584 Msa1171340:CDS 30.0%
AGAGTATAATAACCAACATC+AGG + chr8_1:951827-951846 None:intergenic 30.0%
ACTACTTTCAATCTTGAGAT+TGG - chr8_1:951909-951928 Msa1171340:intron 30.0%
AATCTTGAGATTGGAATAAC+TGG - chr8_1:951918-951937 Msa1171340:intron 30.0%
TGTTGAAAATTCTGGTATAG+CGG + chr8_1:952104-952123 None:intergenic 30.0%
AAGCAAATACAAGAACAAGA+AGG + chr8_1:952206-952225 None:intergenic 30.0%
! GACTTATAATTTGGGACATA+GGG + chr8_1:952249-952268 None:intergenic 30.0%
! AGACTTATAATTTGGGACAT+AGG + chr8_1:952250-952269 None:intergenic 30.0%
GTCTGTCAATAGTTAGTAAA+GGG - chr8_1:952453-952472 Msa1171340:intron 30.0%
TCAATAGTTAGTAAAGGGTT+AGG - chr8_1:952458-952477 Msa1171340:intron 30.0%
CAATAGTTAGTAAAGGGTTA+GGG - chr8_1:952459-952478 Msa1171340:intron 30.0%
AATAGTTAGTAAAGGGTTAG+GGG - chr8_1:952460-952479 Msa1171340:intron 30.0%
! TGAGTAACTCCAAATTTGTT+GGG - chr8_1:952528-952547 Msa1171340:intron 30.0%
GTAAACTGATAGGAAACAAT+TGG + chr8_1:952645-952664 None:intergenic 30.0%
CTTTATGTCAGTAAACTGAT+AGG + chr8_1:952655-952674 None:intergenic 30.0%
ACATAAAGCTAGAAATCACA+AGG - chr8_1:952667-952686 Msa1171340:intron 30.0%
! TGGAGATTAAGTTGTCAAAA+CGG + chr8_1:952695-952714 None:intergenic 30.0%
!!! TTTGTTTTGTGCCATTTTGA+AGG + chr8_1:952735-952754 None:intergenic 30.0%
ATTTAGGGATAGTTCATATG+CGG + chr8_1:953285-953304 None:intergenic 30.0%
TTAGTCCATCAACCTTAAAA+TGG - chr8_1:953388-953407 Msa1171340:intron 30.0%
TAGTATAAAGAAACAACCAG+GGG + chr8_1:953573-953592 None:intergenic 30.0%
GCATTCATATCTGTTGAATT+TGG - chr8_1:953599-953618 Msa1171340:intron 30.0%
TTGTTTATTTCCAGAGGAAA+GGG - chr8_1:953650-953669 Msa1171340:intron 30.0%
AACTATTTCAAATGCGTGTT+CGG - chr8_1:953889-953908 Msa1171340:CDS 30.0%
!!! TTATTTTAACCCACATCTAC+AGG - chr8_1:954381-954400 Msa1171340:intron 30.0%
GTATTAAGATTCCACAAACA+TGG - chr8_1:954572-954591 Msa1171340:intron 30.0%
AAAACATTCTAGTGAAGCTA+TGG - chr8_1:954684-954703 Msa1171340:CDS 30.0%
AAGCTATGGAGAAGAAATAA+AGG - chr8_1:954698-954717 Msa1171340:intron 30.0%
ATTGACATGCAACAATATGA+TGG - chr8_1:954945-954964 Msa1171340:intron 30.0%
TTGACATGCAACAATATGAT+GGG - chr8_1:954946-954965 Msa1171340:intron 30.0%
TGAATGAATCGATCTAACAA+TGG + chr8_1:955051-955070 None:intergenic 30.0%
!! TTAGTTCTAATTCTGCATAC+AGG + chr8_1:955308-955327 None:intergenic 30.0%
TCATCTCCTATTCTTCTGAT+TGG - chr8_1:949273-949292 Msa1171340:three_prime_UTR 35.0%
GAGTAACCAATCAGAAGAAT+AGG + chr8_1:949282-949301 None:intergenic 35.0%
TGGTTTCAGAAAGAGATATG+GGG - chr8_1:949346-949365 Msa1171340:three_prime_UTR 35.0%
ATGTTTGGTCAGTTAACTAC+TGG - chr8_1:949438-949457 Msa1171340:three_prime_UTR 35.0%
! ATTACATGTGTCGGTATTGT+TGG - chr8_1:949606-949625 Msa1171340:CDS 35.0%
!! CTCTTTTAGAAGCTGATGTA+AGG - chr8_1:949719-949738 Msa1171340:intron 35.0%
TAAGTCTTCCTGTTGTAAGA+AGG - chr8_1:949829-949848 Msa1171340:intron 35.0%
ACCTTAACCAATTGTTGATC+GGG + chr8_1:949912-949931 None:intergenic 35.0%
GACCTTAACCAATTGTTGAT+CGG + chr8_1:949913-949932 None:intergenic 35.0%
! ATGGATCACTCCATTTCTTT+TGG - chr8_1:950122-950141 Msa1171340:intron 35.0%
!! CACTCCATTTCTTTTGGAAA+TGG - chr8_1:950128-950147 Msa1171340:intron 35.0%
CTCTCCATTTCCAAAAGAAA+TGG + chr8_1:950135-950154 None:intergenic 35.0%
!! CATTTCTTTTGGAAATGGAG+AGG - chr8_1:950133-950152 Msa1171340:intron 35.0%
! ACACCCATTTTGTTCTTGTA+TGG + chr8_1:950344-950363 None:intergenic 35.0%
!! ACAAAATGGGTGTTGATTGT+TGG - chr8_1:950351-950370 Msa1171340:intron 35.0%
!! CAAAATGGGTGTTGATTGTT+GGG - chr8_1:950352-950371 Msa1171340:intron 35.0%
!! GAATTGACTTTTGCCAAATC+TGG - chr8_1:950428-950447 Msa1171340:intron 35.0%
! ATTTGCTAACTTTGCACACA+CGG + chr8_1:950501-950520 None:intergenic 35.0%
TCATATTCATCTGATCTCAG+GGG - chr8_1:950607-950626 Msa1171340:CDS 35.0%
TATTGACCAGCTTACTATCT+TGG - chr8_1:950674-950693 Msa1171340:intron 35.0%
ATTGACCAGCTTACTATCTT+GGG - chr8_1:950675-950694 Msa1171340:intron 35.0%
ACTACAATGCACATTCTTCA+TGG + chr8_1:950850-950869 None:intergenic 35.0%
ATTAGAAGTGATGTGTTTCC+TGG - chr8_1:950872-950891 Msa1171340:intron 35.0%
TTAGAAGTGATGTGTTTCCT+GGG - chr8_1:950873-950892 Msa1171340:intron 35.0%
!! GAAATTATGCTAGCCTTGAT+AGG - chr8_1:950901-950920 Msa1171340:intron 35.0%
! TAGTTATAGCTTGTATCAGG+TGG - chr8_1:951121-951140 Msa1171340:intron 35.0%
!!! TGCTAAACAAGGTTTTGAAG+AGG - chr8_1:951190-951209 Msa1171340:intron 35.0%
ACAGATAGACAAAGCAATGA+TGG - chr8_1:951373-951392 Msa1171340:CDS 35.0%
ACAACTAACAAGACTTCTGT+TGG + chr8_1:951431-951450 None:intergenic 35.0%
!! AACAGAAGTCTTGTTAGTTG+TGG - chr8_1:951430-951449 Msa1171340:intron 35.0%
CAACTTAAGTATGTGGTCAA+GGG - chr8_1:951640-951659 Msa1171340:intron 35.0%
ATTTCTGTACGCATAAGTCA+GGG + chr8_1:951672-951691 None:intergenic 35.0%
AATTTCTGTACGCATAAGTC+AGG + chr8_1:951673-951692 None:intergenic 35.0%
!!! AGTAGATTTTGGGATGGTTT+TGG + chr8_1:951855-951874 None:intergenic 35.0%
GTTGAAAATTCTGGTATAGC+GGG + chr8_1:952103-952122 None:intergenic 35.0%
GCTCGTAATGTTGAAAATTC+TGG + chr8_1:952112-952131 None:intergenic 35.0%
!! ATGTGATTTCTAGTTGCATG+AGG - chr8_1:952162-952181 Msa1171340:intron 35.0%
ATAGGGAGTAATTGACACAA+AGG + chr8_1:952232-952251 None:intergenic 35.0%
! ATAATTTGAGACGCAGAGTA+TGG - chr8_1:952423-952442 Msa1171340:intron 35.0%
! TAATTTGAGACGCAGAGTAT+GGG - chr8_1:952424-952443 Msa1171340:intron 35.0%
GGTCTGTCAATAGTTAGTAA+AGG - chr8_1:952452-952471 Msa1171340:intron 35.0%
AGAATTAAGGTGGAATCTGT+AGG - chr8_1:952498-952517 Msa1171340:intron 35.0%
GTGAGTAACTCCAAATTTGT+TGG - chr8_1:952527-952546 Msa1171340:intron 35.0%
CTAACATCTCCCAACAAATT+TGG + chr8_1:952540-952559 None:intergenic 35.0%
!! CAAATTTGTTGGGAGATGTT+AGG - chr8_1:952538-952557 Msa1171340:CDS 35.0%
ATCTGGAAAGCCAATTAAGT+TGG - chr8_1:952917-952936 Msa1171340:intron 35.0%
TTTAGGGATAGTTCATATGC+GGG + chr8_1:953284-953303 None:intergenic 35.0%
!! ATTTGGTGCCTTATAGCAAT+TGG - chr8_1:953330-953349 Msa1171340:CDS 35.0%
!! TTTGGTGCCTTATAGCAATT+GGG - chr8_1:953331-953350 Msa1171340:CDS 35.0%
!! TAAGGTTGATGGACTAAACT+TGG + chr8_1:953385-953404 None:intergenic 35.0%
!!! ATGCTCCATTTTAAGGTTGA+TGG + chr8_1:953396-953415 None:intergenic 35.0%
! ATACTCGATGCTCCATTTTA+AGG + chr8_1:953403-953422 None:intergenic 35.0%
AGAGAGGAATTTGGAGATTA+TGG - chr8_1:953526-953545 Msa1171340:intron 35.0%
! CCTCTGGAAATAAACAAGAA+AGG + chr8_1:953647-953666 None:intergenic 35.0%
! CCTTTCTTGTTTATTTCCAG+AGG - chr8_1:953644-953663 Msa1171340:intron 35.0%
CTTGTTTATTTCCAGAGGAA+AGG - chr8_1:953649-953668 Msa1171340:intron 35.0%
GAAATAGTTGAGCTACAAGT+TGG + chr8_1:953878-953897 None:intergenic 35.0%
TCCTCAAGATTACTAAGTGT+TGG + chr8_1:953954-953973 None:intergenic 35.0%
ACTGATGTGCATTTAATCCA+CGG - chr8_1:954474-954493 Msa1171340:intron 35.0%
ATTCAGAATATCTTCATCCG+TGG + chr8_1:954494-954513 None:intergenic 35.0%
AAAACATCCTAGTGAAGCTA+TGG - chr8_1:954640-954659 Msa1171340:CDS 35.0%
! AGCTTCACTAGAATGTTTTC+TGG + chr8_1:954683-954702 None:intergenic 35.0%
TGACATGCAACAATATGATG+GGG - chr8_1:954947-954966 Msa1171340:intron 35.0%
AATTTGGATCAACATGTCAC+TGG - chr8_1:954978-954997 Msa1171340:intron 35.0%
TGAATCGATCTAACAATGGA+AGG + chr8_1:955047-955066 None:intergenic 35.0%
! TATAGTAATGAGTGTTGTCC+TGG - chr8_1:955071-955090 Msa1171340:CDS 35.0%
! GTAGTAGTACTGAGTTGAGT+TGG - chr8_1:949099-949118 Msa1171340:three_prime_UTR 40.0%
AGAAGAAGAAGAAGAAGAGG+AGG + chr8_1:949194-949213 None:intergenic 40.0%
CGAAGAAGAAGAAGAAGAAG+AGG + chr8_1:949197-949216 None:intergenic 40.0%
AAGCGTAACTGTGAGAAGAA+TGG - chr8_1:949383-949402 Msa1171340:three_prime_UTR 40.0%
! TTCTCCTTTGAGTTTGTTCC+AGG + chr8_1:949475-949494 None:intergenic 40.0%
TGGAACAAACTCAAAGGAGA+AGG - chr8_1:949474-949493 Msa1171340:three_prime_UTR 40.0%
!! ATTTGACTTGGTTTGTGCAG+AGG - chr8_1:949648-949667 Msa1171340:CDS 40.0%
AGGCTCCACAATATTGTCTT+TGG + chr8_1:949680-949699 None:intergenic 40.0%
TGCACAAACCTTCTTACAAC+AGG + chr8_1:949840-949859 None:intergenic 40.0%
AGTCAAACCCGATCAACAAT+TGG - chr8_1:949902-949921 Msa1171340:intron 40.0%
ACCCGATCAACAATTGGTTA+AGG - chr8_1:949908-949927 Msa1171340:intron 40.0%
GAACTTGTACAATTGATGGG+TGG - chr8_1:950395-950414 Msa1171340:intron 40.0%
!!! TGGTCCCACTGTCATTTTAT+TGG - chr8_1:950448-950467 Msa1171340:intron 40.0%
CCAGCCAATAAAATGACAGT+GGG + chr8_1:950455-950474 None:intergenic 40.0%
TCCAGCCAATAAAATGACAG+TGG + chr8_1:950456-950475 None:intergenic 40.0%
!! ATTTTATTGGCTGGACTCCA+GGG - chr8_1:950461-950480 Msa1171340:intron 40.0%
TAGAAGGTGATGAAGGAGAT+TGG + chr8_1:950547-950566 None:intergenic 40.0%
TCGTTTCAATAAGGCGAAGA+AGG + chr8_1:950586-950605 None:intergenic 40.0%
GTTTACCCAAGATAGTAAGC+TGG + chr8_1:950683-950702 None:intergenic 40.0%
GCTTACTATCTTGGGTAAAC+AGG - chr8_1:950683-950702 Msa1171340:intron 40.0%
TAGCATAATTTCAGTAGCCC+AGG + chr8_1:950893-950912 None:intergenic 40.0%
! CCTTGTTTAGCAATGTCTGA+TGG + chr8_1:951182-951201 None:intergenic 40.0%
CCATCAGACATTGCTAAACA+AGG - chr8_1:951179-951198 Msa1171340:intron 40.0%
TTATTGTTGACACTGCTGGT+AGG - chr8_1:951237-951256 Msa1171340:intron 40.0%
TTAGTTGTGGATGCTATGAC+AGG - chr8_1:951443-951462 Msa1171340:intron 40.0%
TAGTTGTGGATGCTATGACA+GGG - chr8_1:951444-951463 Msa1171340:intron 40.0%
TACCAAATTGGTGTAATCCG+AGG - chr8_1:951612-951631 Msa1171340:intron 40.0%
ACCAAATTGGTGTAATCCGA+GGG - chr8_1:951613-951632 Msa1171340:intron 40.0%
! ATACTTAAGTTGCTTCCCCT+CGG + chr8_1:951632-951651 None:intergenic 40.0%
GCAACTTAAGTATGTGGTCA+AGG - chr8_1:951639-951658 Msa1171340:intron 40.0%
! AGAAATTCACCTTCTGAGAG+AGG - chr8_1:951686-951705 Msa1171340:intron 40.0%
TGTAAAGACCAACTCATTCG+AGG + chr8_1:951735-951754 None:intergenic 40.0%
!! CAGTGAAGTAGATTTTGGGA+TGG + chr8_1:951861-951880 None:intergenic 40.0%
!! ACCATCTAGCTTTGTCAAGA+TGG + chr8_1:951946-951965 None:intergenic 40.0%
AAGCTAGATGGTGATTCAAG+AGG - chr8_1:951954-951973 Msa1171340:intron 40.0%
GGTTAAGACGAGAACAAGTA+AGG + chr8_1:952072-952091 None:intergenic 40.0%
ACTAACTATTGACAGACCAG+AGG + chr8_1:952450-952469 None:intergenic 40.0%
AGTCCTCTGTATACAACTCT+AGG + chr8_1:952578-952597 None:intergenic 40.0%
TTTCCAGATACCTGTCATCA+TGG + chr8_1:952906-952925 None:intergenic 40.0%
!! GGAAAGCCAATTAAGTTGGT+AGG - chr8_1:952921-952940 Msa1171340:intron 40.0%
TGTCCTTTCATTTGTGGAGA+AGG - chr8_1:953019-953038 Msa1171340:intron 40.0%
! CACTCATGATCTTCTTTTGC+AGG + chr8_1:953156-953175 None:intergenic 40.0%
AACTCGTACTGTTGCACAAA+TGG - chr8_1:953207-953226 Msa1171340:intron 40.0%
ACTCGTACTGTTGCACAAAT+GGG - chr8_1:953208-953227 Msa1171340:intron 40.0%
CTTTCCTCCCAATTGCTATA+AGG + chr8_1:953341-953360 None:intergenic 40.0%
ATAGCAATTGGGAGGAAAGT+AGG - chr8_1:953342-953361 Msa1171340:CDS 40.0%
ATAATAGAAGCAATGACCCC+TGG - chr8_1:953554-953573 Msa1171340:intron 40.0%
! AACTCTTTTCCTCCTAACAG+GGG + chr8_1:953700-953719 None:intergenic 40.0%
! CAACTCTTTTCCTCCTAACA+GGG + chr8_1:953701-953720 None:intergenic 40.0%
AAAAGAGTTGCTCAGGATTC+AGG - chr8_1:953711-953730 Msa1171340:intron 40.0%
AAAGAGTTGCTCAGGATTCA+GGG - chr8_1:953712-953731 Msa1171340:intron 40.0%
TAATAGTGACCTTCGAAGTG+TGG - chr8_1:953791-953810 Msa1171340:intron 40.0%
GTATAGAAACCACACTTCGA+AGG + chr8_1:953803-953822 None:intergenic 40.0%
TGTTCGGATGAAGAACCTAA+TGG - chr8_1:953905-953924 Msa1171340:intron 40.0%
GTTCGGATGAAGAACCTAAT+GGG - chr8_1:953906-953925 Msa1171340:intron 40.0%
! GAAGAACCTAATGGGTGTAA+TGG - chr8_1:953914-953933 Msa1171340:intron 40.0%
! AACCTAATGGGTGTAATGGA+AGG - chr8_1:953918-953937 Msa1171340:intron 40.0%
GCCAACACTTAGTAATCTTG+AGG - chr8_1:953950-953969 Msa1171340:intron 40.0%
AGCACTTAAGACAGAGGAAA+AGG - chr8_1:953974-953993 Msa1171340:intron 40.0%
! AAAGTGGTAGTGCAGTAGTT+AGG - chr8_1:954192-954211 Msa1171340:intron 40.0%
TAGTGCAGTAGTTAGGACTT+GGG - chr8_1:954199-954218 Msa1171340:intron 40.0%
CGAAAGATACCTGTAGATGT+GGG + chr8_1:954393-954412 None:intergenic 40.0%
CCACATCTACAGGTATCTTT+CGG - chr8_1:954391-954410 Msa1171340:intron 40.0%
CACATCTACAGGTATCTTTC+GGG - chr8_1:954392-954411 Msa1171340:intron 40.0%
!!! CCTTCTACACCTTTTTTAGC+CGG - chr8_1:954617-954636 Msa1171340:CDS 40.0%
! GGATGTTTTCCGGCTAAAAA+AGG + chr8_1:954629-954648 None:intergenic 40.0%
! AGCTTCACTAGGATGTTTTC+CGG + chr8_1:954639-954658 None:intergenic 40.0%
TTCTTCTCCATAGCTTCACT+AGG + chr8_1:954650-954669 None:intergenic 40.0%
TTCTGCATTCTGCCTATATC+AGG - chr8_1:954803-954822 Msa1171340:CDS 40.0%
AGAGTCAAGGAGGTTATTTG+CGG - chr8_1:954860-954879 Msa1171340:intron 40.0%
GACATGCAACAATATGATGG+GGG - chr8_1:954948-954967 Msa1171340:intron 40.0%
! AACAATATGATGGGGGAGTT+TGG - chr8_1:954955-954974 Msa1171340:intron 40.0%
CCTAAATTTCACCAAACTCC+AGG + chr8_1:955092-955111 None:intergenic 40.0%
! CCTGGAGTTTGGTGAAATTT+AGG - chr8_1:955089-955108 Msa1171340:CDS 40.0%
!! CTGAGTTGAGTTGGTGAAGA+TGG - chr8_1:949108-949127 Msa1171340:three_prime_UTR 45.0%
AAGGTTCGATGATGAGAGAG+AGG + chr8_1:949166-949185 None:intergenic 45.0%
AGAAGAAGAAGAAGAGGAGG+AGG + chr8_1:949191-949210 None:intergenic 45.0%
CAGAAGAATAGGAGATGACG+TGG + chr8_1:949271-949290 None:intergenic 45.0%
GGATATGATTCGTCCAGTTG+TGG - chr8_1:949404-949423 Msa1171340:three_prime_UTR 45.0%
TCTGCCTGGAACAAACTCAA+AGG - chr8_1:949468-949487 Msa1171340:three_prime_UTR 45.0%
TGGAGCCTATGCGAGATATT+AGG - chr8_1:949692-949711 Msa1171340:intron 45.0%
GCTCTCCTAATATCTCGCAT+AGG + chr8_1:949700-949719 None:intergenic 45.0%
TGCATGCATGTTGTGTTTGC+AGG - chr8_1:949806-949825 Msa1171340:intron 45.0%
TGTGCAATCTGTTACCGATC+AGG - chr8_1:949854-949873 Msa1171340:intron 45.0%
GAGAGGATCTCAACTCATTG+TGG - chr8_1:950150-950169 Msa1171340:intron 45.0%
GGGGACTTGTCCACTTTATA+CGG + chr8_1:950210-950229 None:intergenic 45.0%
! TGTACAATTGATGGGTGGAG+AGG - chr8_1:950400-950419 Msa1171340:intron 45.0%
AATGACAGTGGGACCAGATT+TGG + chr8_1:950444-950463 None:intergenic 45.0%
!!! CCCACTGTCATTTTATTGGC+TGG - chr8_1:950452-950471 Msa1171340:intron 45.0%
!! CATTTTATTGGCTGGACTCC+AGG - chr8_1:950460-950479 Msa1171340:intron 45.0%
AAGAGTTGCATGCTAGTTGC+CGG - chr8_1:950630-950649 Msa1171340:CDS 45.0%
AGCAGGTCTATAAACATCCC+CGG + chr8_1:950652-950671 None:intergenic 45.0%
TGCTAAAGCAGCACCTATCA+AGG + chr8_1:950917-950936 None:intergenic 45.0%
CGGTACCTGCTGTATATACA+GGG + chr8_1:951151-951170 None:intergenic 45.0%
TCGGTACCTGCTGTATATAC+AGG + chr8_1:951152-951171 None:intergenic 45.0%
GTGGTTATTGTTGACACTGC+TGG - chr8_1:951233-951252 Msa1171340:intron 45.0%
CCAAATTGGTGTAATCCGAG+GGG - chr8_1:951614-951633 Msa1171340:intron 45.0%
GGGGAAGCAACTTAAGTATG+TGG - chr8_1:951633-951652 Msa1171340:intron 45.0%
GCCATCTTGACAAAGCTAGA+TGG - chr8_1:951942-951961 Msa1171340:intron 45.0%
CTAGATGGTGATTCAAGAGG+TGG - chr8_1:951957-951976 Msa1171340:intron 45.0%
!! AGCAGCTTTGAGTGTCAAAG+AGG - chr8_1:951980-951999 Msa1171340:intron 45.0%
!! CTGGTATAGCGGGTAACTAT+TGG + chr8_1:952093-952112 None:intergenic 45.0%
AGTTAGTAAAGGGTTAGGGG+TGG - chr8_1:952463-952482 Msa1171340:intron 45.0%
GTTAGTAAAGGGTTAGGGGT+GGG - chr8_1:952464-952483 Msa1171340:intron 45.0%
TTGGGAGATGTTAGGAGCTT+TGG - chr8_1:952546-952565 Msa1171340:CDS 45.0%
CAGCCTAGAGTTGTATACAG+AGG - chr8_1:952572-952591 Msa1171340:CDS 45.0%
TTGGGTAGTTCCATGATGAC+AGG - chr8_1:952893-952912 Msa1171340:intron 45.0%
GTTCCATGATGACAGGTATC+TGG - chr8_1:952900-952919 Msa1171340:intron 45.0%
!! CCAATTAAGTTGGTAGGACG+CGG - chr8_1:952927-952946 Msa1171340:intron 45.0%
!! CAATTAAGTTGGTAGGACGC+GGG - chr8_1:952928-952947 Msa1171340:intron 45.0%
!! AATTAAGTTGGTAGGACGCG+GGG - chr8_1:952929-952948 Msa1171340:intron 45.0%
GGGAGATGTCCTTTCATTTG+TGG - chr8_1:953013-953032 Msa1171340:intron 45.0%
GATGCAACAAGAAGATGCTG+AGG - chr8_1:953129-953148 Msa1171340:CDS 45.0%
AGGAATCATCCCAATGACTC+GGG + chr8_1:953242-953261 None:intergenic 45.0%
CAGGAATCATCCCAATGACT+CGG + chr8_1:953243-953262 None:intergenic 45.0%
CATTGGGATGATTCCTGGTA+TGG - chr8_1:953246-953265 Msa1171340:intron 45.0%
GATGATTCCTGGTATGGCAA+AGG - chr8_1:953252-953271 Msa1171340:intron 45.0%
TTCCTGGTATGGCAAAGGTA+TGG - chr8_1:953257-953276 Msa1171340:intron 45.0%
CATCTCATCTGCATGCTTAC+AGG - chr8_1:953478-953497 Msa1171340:intron 45.0%
TCTGCTTCTCGAATTTGAGC+AGG + chr8_1:953509-953528 None:intergenic 45.0%
CTCAAATTCGAGAAGCAGAG+AGG - chr8_1:953510-953529 Msa1171340:intron 45.0%
TCGAGAAGCAGAGAGGAATT+TGG - chr8_1:953517-953536 Msa1171340:intron 45.0%
AAGGGAAAAGCCAGAACTGT+TGG - chr8_1:953668-953687 Msa1171340:intron 45.0%
! GCAACTCTTTTCCTCCTAAC+AGG + chr8_1:953702-953721 None:intergenic 45.0%
TAGGAGGAAAAGAGTTGCTC+AGG - chr8_1:953704-953723 Msa1171340:intron 45.0%
CACCTTCCATTACACCCATT+AGG + chr8_1:953923-953942 None:intergenic 45.0%
! CTAATGGGTGTAATGGAAGG+TGG - chr8_1:953921-953940 Msa1171340:intron 45.0%
!! TGAGGAAGCACTTAAGACAG+AGG - chr8_1:953968-953987 Msa1171340:intron 45.0%
GTAGTGCAGTAGTTAGGACT+TGG - chr8_1:954198-954217 Msa1171340:intron 45.0%
CCGAAAGATACCTGTAGATG+TGG + chr8_1:954394-954413 None:intergenic 45.0%
AGATTCCACAAACATGGGTG+TGG - chr8_1:954578-954597 Msa1171340:intron 45.0%
TCAAACCACACCCATGTTTG+TGG + chr8_1:954586-954605 None:intergenic 45.0%
! CCGGCTAAAAAAGGTGTAGA+AGG + chr8_1:954620-954639 None:intergenic 45.0%
GGAGAAAGAAAGCAGAGTCA+AGG - chr8_1:954847-954866 Msa1171340:CDS 45.0%
GAAAGAAAGCAGAGTCAAGG+AGG - chr8_1:954850-954869 Msa1171340:intron 45.0%
TATTTGCGGACTCAACGTCA+AGG - chr8_1:954874-954893 Msa1171340:intron 45.0%
! TTTTTGCTCCCAAATCCACG+AGG + chr8_1:954906-954925 None:intergenic 45.0%
! TGATGGGGGAGTTTGGAATT+TGG - chr8_1:954962-954981 Msa1171340:intron 45.0%
! ATGAGTGTTGTCCTGGAGTT+TGG - chr8_1:955078-955097 Msa1171340:CDS 45.0%
GCAGAAATGAGATGTACGTG+CGG - chr8_1:955111-955130 Msa1171340:CDS 45.0%
CAGAAATGAGATGTACGTGC+GGG - chr8_1:955112-955131 Msa1171340:CDS 45.0%
AAGAGACAGACAGATGATGC+AGG + chr8_1:955332-955351 None:intergenic 45.0%
CATCTGTCTGTCTCTTGAAC+AGG - chr8_1:955336-955355 Msa1171340:CDS 45.0%
AGAAGAAGAGGAGGAGGAGA+AGG + chr8_1:949185-949204 None:intergenic 50.0%
TGATTCGTCCAGTTGTGGTC+AGG - chr8_1:949409-949428 Msa1171340:three_prime_UTR 50.0%
GATTCGTCCAGTTGTGGTCA+GGG - chr8_1:949410-949429 Msa1171340:three_prime_UTR 50.0%
ATTTCAGCCCTGACCACAAC+TGG + chr8_1:949420-949439 None:intergenic 50.0%
GTGGTCAGGGCTGAAATGTT+TGG - chr8_1:949423-949442 Msa1171340:three_prime_UTR 50.0%
!! CTACTGGTCTTGAATCTGCC+TGG - chr8_1:949454-949473 Msa1171340:three_prime_UTR 50.0%
TCCACTCCACACTACTCACA+CGG - chr8_1:949535-949554 Msa1171340:three_prime_UTR 50.0%
ATCTGTTACCGATCAGGCTG+TGG - chr8_1:949860-949879 Msa1171340:intron 50.0%
TCTGTTACCGATCAGGCTGT+GGG - chr8_1:949861-949880 Msa1171340:intron 50.0%
! ATTGATGGGTGGAGAGGTCT+CGG - chr8_1:950406-950425 Msa1171340:intron 50.0%
AGAGTTGCATGCTAGTTGCC+GGG - chr8_1:950631-950650 Msa1171340:CDS 50.0%
GTAAGCTGGTCAATAGCAGC+AGG + chr8_1:950669-950688 None:intergenic 50.0%
GACGTCCCTGTATATACAGC+AGG - chr8_1:951143-951162 Msa1171340:intron 50.0%
CCCCTCGGATTACACCAATT+TGG + chr8_1:951617-951636 None:intergenic 50.0%
CAAGAGTTGCCTCTCTCAGA+AGG + chr8_1:951698-951717 None:intergenic 50.0%
CTCCAGATCCTCGAATGAGT+TGG - chr8_1:951724-951743 Msa1171340:intron 50.0%
GACCAACTCATTCGAGGATC+TGG + chr8_1:951729-951748 None:intergenic 50.0%
CCGCGTCCTACCAACTTAAT+TGG + chr8_1:952930-952949 None:intergenic 50.0%
CTAGTATTCGCCCAGCCATT+CGG + chr8_1:952989-953008 None:intergenic 50.0%
GCTGGGCGAATACTAGGAAT+GGG - chr8_1:952993-953012 Msa1171340:intron 50.0%
GTTCTGTGTCCCGAGTCATT+GGG - chr8_1:953230-953249 Msa1171340:intron 50.0%
CGAGTCATTGGGATGATTCC+TGG - chr8_1:953241-953260 Msa1171340:intron 50.0%
GTCCATACCTTTGCCATACC+AGG + chr8_1:953262-953281 None:intergenic 50.0%
GGTGCCTTATAGCAATTGGG+AGG - chr8_1:953334-953353 Msa1171340:CDS 50.0%
!!! TCTGGCTTTTCCCTTTCCTC+TGG + chr8_1:953663-953682 None:intergenic 50.0%
TGTTGGCAGAATCCCCTGTT+AGG - chr8_1:953685-953704 Msa1171340:intron 50.0%
TTCAGGGAAAACAGAGCAGC+AGG - chr8_1:953728-953747 Msa1171340:intron 50.0%
TGCAGTAGTTAGGACTTGGG+AGG - chr8_1:954202-954221 Msa1171340:intron 50.0%
TCTACAGGTATCTTTCGGGC+AGG - chr8_1:954396-954415 Msa1171340:intron 50.0%
!! AGAGAGGCGTCGACAAATGG+CGG + chr8_1:949150-949169 None:intergenic 55.0%
!! GAGAGAGAGGCGTCGACAAA+TGG + chr8_1:949153-949172 None:intergenic 55.0%
TCCGTGTGAGTAGTGTGGAG+TGG + chr8_1:949539-949558 None:intergenic 55.0%
GTGTCTCCGTGTGAGTAGTG+TGG + chr8_1:949544-949563 None:intergenic 55.0%
TCCAACACCCACAGCCTGAT+CGG + chr8_1:949871-949890 None:intergenic 55.0%
GAGTTGCATGCTAGTTGCCG+GGG - chr8_1:950632-950651 Msa1171340:CDS 55.0%
ATGACAGGGCAAGAAGCAGC+AGG - chr8_1:951458-951477 Msa1171340:intron 55.0%
ACCTTTCTACCCCGACCGAA+TGG - chr8_1:952971-952990 Msa1171340:intron 55.0%
TATTCGCCCAGCCATTCGGT+CGG + chr8_1:952985-953004 None:intergenic 55.0%
CGAATGGCTGGGCGAATACT+AGG - chr8_1:952987-953006 Msa1171340:intron 55.0%
GGCTGGGCGAATACTAGGAA+TGG - chr8_1:952992-953011 Msa1171340:intron 55.0%
GGTTCTGTGTCCCGAGTCAT+TGG - chr8_1:953229-953248 Msa1171340:intron 55.0%
GGGGATTCTGCCAACAGTTC+TGG + chr8_1:953681-953700 None:intergenic 55.0%
TGGCAGAATCCCCTGTTAGG+AGG - chr8_1:953688-953707 Msa1171340:intron 55.0%
TGCCTATATCAGGCTCCACC+TGG - chr8_1:954813-954832 Msa1171340:CDS 55.0%
TGCCAGGTGGAGCCTGATAT+AGG + chr8_1:954818-954837 None:intergenic 55.0%
TTTCTCCTCCTTGCAGTGCC+AGG + chr8_1:954834-954853 None:intergenic 55.0%
AGGCAACCTCCTCGTGGATT+TGG - chr8_1:954894-954913 Msa1171340:intron 55.0%
GGCAACCTCCTCGTGGATTT+GGG - chr8_1:954895-954914 Msa1171340:intron 55.0%
TTGCTCCCAAATCCACGAGG+AGG + chr8_1:954903-954922 None:intergenic 55.0%
!! GAGAGGCGTCGACAAATGGC+GGG + chr8_1:949149-949168 None:intergenic 60.0%
ACCGATCAGGCTGTGGGTGT+TGG - chr8_1:949867-949886 Msa1171340:intron 60.0%
!! GTGGGTGTTGGAGTCACTCG+AGG - chr8_1:949879-949898 Msa1171340:intron 60.0%
TTGGCTGGACTCCAGGGAGT+TGG - chr8_1:950467-950486 Msa1171340:intron 60.0%
TGGCTGGACTCCAGGGAGTT+GGG - chr8_1:950468-950487 Msa1171340:intron 60.0%
CGGTTGTCTTCCCAACTCCC+TGG + chr8_1:950481-950500 None:intergenic 60.0%
TGACACTGCTGGTAGGCTGC+AGG - chr8_1:951244-951263 Msa1171340:intron 60.0%
AGACGCAGAGTATGGGCCTC+TGG - chr8_1:952431-952450 Msa1171340:intron 60.0%
GCCATTCGGTCGGGGTAGAA+AGG + chr8_1:952975-952994 None:intergenic 60.0%
TTCTACCCCGACCGAATGGC+TGG - chr8_1:952975-952994 Msa1171340:intron 60.0%
TCTACCCCGACCGAATGGCT+GGG - chr8_1:952976-952995 Msa1171340:intron 60.0%
ATTCGCCCAGCCATTCGGTC+GGG + chr8_1:952984-953003 None:intergenic 60.0%
ACGTCAAGGCAACCTCCTCG+TGG - chr8_1:954888-954907 Msa1171340:intron 60.0%
TTCGCCCAGCCATTCGGTCG+GGG + chr8_1:952983-953002 None:intergenic 65.0%
AGGCTCCACCTGGCACTGCA+AGG - chr8_1:954823-954842 Msa1171340:CDS 65.0%
CTCCACCTGGCACTGCAAGG+AGG - chr8_1:954826-954845 Msa1171340:CDS 65.0%
CTCCTCCTTGCAGTGCCAGG+TGG + chr8_1:954831-954850 None:intergenic 65.0%
GGTAGGACGCGGGGAACGCA+TGG - chr8_1:952938-952957 Msa1171340:intron 70.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 949044 955491 949044 ID=Msa1171340;Name=Msa1171340
chr8_1 mRNA 949044 955491 949044 ID=Msa1171340-mRNA-1;Parent=Msa1171340;Name=Msa1171340-mRNA-1;_AED=0.07;_eAED=0.07;_QI=83|0.92|0.93|1|1|1|15|562|551
chr8_1 exon 949044 949710 949044 ID=Msa1171340-mRNA-1:exon:290;Parent=Msa1171340-mRNA-1
chr8_1 exon 950540 950665 950540 ID=Msa1171340-mRNA-1:exon:289;Parent=Msa1171340-mRNA-1
chr8_1 exon 950786 950871 950786 ID=Msa1171340-mRNA-1:exon:288;Parent=Msa1171340-mRNA-1
chr8_1 exon 950960 951035 950960 ID=Msa1171340-mRNA-1:exon:287;Parent=Msa1171340-mRNA-1
chr8_1 exon 951262 951405 951262 ID=Msa1171340-mRNA-1:exon:286;Parent=Msa1171340-mRNA-1
chr8_1 exon 951483 951620 951483 ID=Msa1171340-mRNA-1:exon:285;Parent=Msa1171340-mRNA-1
chr8_1 exon 952534 952634 952534 ID=Msa1171340-mRNA-1:exon:284;Parent=Msa1171340-mRNA-1
chr8_1 exon 953056 953158 953056 ID=Msa1171340-mRNA-1:exon:283;Parent=Msa1171340-mRNA-1
chr8_1 exon 953270 953395 953270 ID=Msa1171340-mRNA-1:exon:282;Parent=Msa1171340-mRNA-1
chr8_1 exon 953831 953908 953831 ID=Msa1171340-mRNA-1:exon:281;Parent=Msa1171340-mRNA-1
chr8_1 exon 954000 954152 954000 ID=Msa1171340-mRNA-1:exon:280;Parent=Msa1171340-mRNA-1
chr8_1 exon 954606 954707 954606 ID=Msa1171340-mRNA-1:exon:279;Parent=Msa1171340-mRNA-1
chr8_1 exon 954800 954867 954800 ID=Msa1171340-mRNA-1:exon:278;Parent=Msa1171340-mRNA-1
chr8_1 exon 955040 955157 955040 ID=Msa1171340-mRNA-1:exon:277;Parent=Msa1171340-mRNA-1
chr8_1 exon 955277 955491 955277 ID=Msa1171340-mRNA-1:exon:276;Parent=Msa1171340-mRNA-1
chr8_1 five_prime_UTR 955409 955491 955409 ID=Msa1171340-mRNA-1:five_prime_utr;Parent=Msa1171340-mRNA-1
chr8_1 CDS 955277 955408 955277 ID=Msa1171340-mRNA-1:cds;Parent=Msa1171340-mRNA-1
chr8_1 CDS 955040 955157 955040 ID=Msa1171340-mRNA-1:cds;Parent=Msa1171340-mRNA-1
chr8_1 CDS 954800 954867 954800 ID=Msa1171340-mRNA-1:cds;Parent=Msa1171340-mRNA-1
chr8_1 CDS 954606 954707 954606 ID=Msa1171340-mRNA-1:cds;Parent=Msa1171340-mRNA-1
chr8_1 CDS 954000 954152 954000 ID=Msa1171340-mRNA-1:cds;Parent=Msa1171340-mRNA-1
chr8_1 CDS 953831 953908 953831 ID=Msa1171340-mRNA-1:cds;Parent=Msa1171340-mRNA-1
chr8_1 CDS 953270 953395 953270 ID=Msa1171340-mRNA-1:cds;Parent=Msa1171340-mRNA-1
chr8_1 CDS 953056 953158 953056 ID=Msa1171340-mRNA-1:cds;Parent=Msa1171340-mRNA-1
chr8_1 CDS 952534 952634 952534 ID=Msa1171340-mRNA-1:cds;Parent=Msa1171340-mRNA-1
chr8_1 CDS 951483 951620 951483 ID=Msa1171340-mRNA-1:cds;Parent=Msa1171340-mRNA-1
chr8_1 CDS 951262 951405 951262 ID=Msa1171340-mRNA-1:cds;Parent=Msa1171340-mRNA-1
chr8_1 CDS 950960 951035 950960 ID=Msa1171340-mRNA-1:cds;Parent=Msa1171340-mRNA-1
chr8_1 CDS 950786 950871 950786 ID=Msa1171340-mRNA-1:cds;Parent=Msa1171340-mRNA-1
chr8_1 CDS 950540 950665 950540 ID=Msa1171340-mRNA-1:cds;Parent=Msa1171340-mRNA-1
chr8_1 CDS 949606 949710 949606 ID=Msa1171340-mRNA-1:cds;Parent=Msa1171340-mRNA-1
chr8_1 three_prime_UTR 949044 949605 949044 ID=Msa1171340-mRNA-1:three_prime_utr;Parent=Msa1171340-mRNA-1
Gene Sequence

>Msa1171340

ATGGAAGCAGTACTAGCGTCCCGCCATTTGTCGACGCCTCTCTCTCATCATCGAACCTTCTCCTCCTCCTCTTCTTCTTCTTCTTCTTCGAACAAGCTTTGCTCTTCCCTTTCTTACAGAAATTCTTTCGCGTCGAAAAGCGTAACTGTGAGAAGAATGGATATGATTCGTCCAGTTGTGGTCAGGGCTGAAATGTTTGGTCAGTTAACTACTGGTCTTGAATCTGCCTGGAACAAACTCAAAGGAGAAGAGGTTTTGACCAAAGACAATATTGTGGAGCCTATGCGAGATATTAGGAGAGCTCTTTTAGAAGCTGATGTAAGTCTTCCTGTTGTAAGAAGGTTTGTGCAATCTGTTACCGATCAGGCTGTGGGTGTTGGAGTCACTCGAGGAGTCAAACCCGATCAACAATTGGTTAAGATTGTTCATGATGAACTTGTACAATTGATGGGTGGAGAGGTCTCGGAATTGACTTTTGCCAAATCTGGTCCCACTGTCATTTTATTGGCTGGACTCCAGGGAGTTGGGAAGACAACCGTGTGTGCAAAGTTAGCAAATTATTTCAAGAAACAGGGGAAGAGTTGCATGCTAGTTGCCGGGGATGTTTATAGACCTGCTGCTATTGACCAGCTTACTATCTTGGGTAAACAGGTGGACGTCCCTGTATATACAGCAGGTACCGATGTTAAACCATCAGACATTGCTAAACAAGGTTTTGAAGAGGCCAAAAAGAAGAAAATTGATGTGGTTATTGTTGACACTGCTGGTAGGCTGCAGATAGACAAAGCAATGATGGATGAGTTAAAAGATGTGAAACGGGTACTGAATCCAACAGAAGTCTTGTTAGTTGTGGATGCTATGACAGGGCAAGAAGCAGCAGCTTTGGTGACTACTTTCAATCTTGAGATTGGAATAACTGGTGCCATCTTGACAAAGCTAGATGGTGATTCAAGAGGTGGAGCAGCTTTGAGTGTCAAAGAGGTATCTGGAAAGCCAATTAAGTTGGTAGGACGCGGGGAACGCATGGAAGATCTTGAACCTTTCTACCCCGACCGAATGGCTGGGCGAATACTAGGAATGGGAGATGTCCTTTCATTTGTGGAGAAGGCACAAGAAGTTATGCAACAAGAAGATGCTGAGGACCTGCAAAAGAAGATCATGAGTGCAAAGTTTGACTTTAATGATTTTCTAAAGCAAACTCGTACTGTTGCACAAATGGGTTCTGTGTCCCGAGTCATTGGGATGATTCCTGGTATGGCAAAGGTTACTCCTGCTCAAATTCGAGAAGCAGAGAGGAATTTGGAGATTATGGAAGTGATAATAGAAGCAATGACCCCTGAGGAAAGGGAAAAGCCAGAACTGTTGGCAGAATCCCCTGTTAGGAGGAAAAGAGTTGCTCAGGATTCAGGGAAAACAGAGCAGCAGGTAAGCCAACTTGTAGCTCAACTATTTCAAATGCGTGTTCGGATGAAGAACCTAATGGGTGTAATGGAAGGTGGTTCAATGCCAACACTTAGTAATCTTGAGGAAGCACTTAAGACAGAGGAAAAGGCTCCACCTGGCACTGCAAGGAGGAGAAAGAAAGCAGAGTCAAGGAGGTTATTTGCGGACTCAACGTCAAGGCAACCTCCTCGTGGATTTGGGAGCAAAAACTAA

Protein sequence

>Msa1171340

MEAVLASRHLSTPLSHHRTFSSSSSSSSSSNKLCSSLSYRNSFASKSVTVRRMDMIRPVVVRAEMFGQLTTGLESAWNKLKGEEVLTKDNIVEPMRDIRRALLEADVSLPVVRRFVQSVTDQAVGVGVTRGVKPDQQLVKIVHDELVQLMGGEVSELTFAKSGPTVILLAGLQGVGKTTVCAKLANYFKKQGKSCMLVAGDVYRPAAIDQLTILGKQVDVPVYTAGTDVKPSDIAKQGFEEAKKKKIDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNLEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEDLQKKIMSAKFDFNDFLKQTRTVAQMGSVSRVIGMIPGMAKVTPAQIREAERNLEIMEVIIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSMPTLSNLEEALKTEEKAPPGTARRRKKAESRRLFADSTSRQPPRGFGSKN*