Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0502090 | XP_013459897.1 | 96.333 | 300 | 11 | 0 | 1 | 300 | 1 | 300 | 0.0 | 570 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0502090 | sp|Q9FLP3|MGE1_ARATH | 53.398 | 309 | 125 | 6 | 1 | 300 | 1 | 299 | 6.13e-100 | 298 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0502090 | A0A072UXX1 | 96.333 | 300 | 11 | 0 | 1 | 300 | 1 | 300 | 0.0 | 570 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0010490 | Msa0502090 | 0.807559 | 4.764419e-50 | -8.615850e-47 |
| Msa0011960 | Msa0502090 | 0.808054 | 3.739031e-50 | -8.615850e-47 |
| Msa0015090 | Msa0502090 | 0.800370 | 1.488064e-48 | -8.615850e-47 |
| Msa0027770 | Msa0502090 | 0.803355 | 3.626701e-49 | -8.615850e-47 |
| Msa0029260 | Msa0502090 | 0.828337 | 9.507506e-55 | -8.615850e-47 |
| Msa0030300 | Msa0502090 | 0.833180 | 6.184336e-56 | -8.615850e-47 |
| Msa0033950 | Msa0502090 | 0.817521 | 3.159405e-52 | -8.615850e-47 |
| Msa0034030 | Msa0502090 | 0.821587 | 3.729199e-53 | -8.615850e-47 |
| Msa0037770 | Msa0502090 | 0.806289 | 8.840683e-50 | -8.615850e-47 |
| Msa0043660 | Msa0502090 | 0.822551 | 2.229867e-53 | -8.615850e-47 |
| Msa0049750 | Msa0502090 | 0.803375 | 3.592623e-49 | -8.615850e-47 |
| Msa0051630 | Msa0502090 | 0.807639 | 4.580896e-50 | -8.615850e-47 |
| Msa0051740 | Msa0502090 | 0.816524 | 5.291328e-52 | -8.615850e-47 |
| Msa0051750 | Msa0502090 | 0.825316 | 5.010164e-54 | -8.615850e-47 |
| Msa0054440 | Msa0502090 | 0.823773 | 1.156322e-53 | -8.615850e-47 |
| Msa0054480 | Msa0502090 | 0.808962 | 2.393433e-50 | -8.615850e-47 |
| Msa0059950 | Msa0502090 | 0.812822 | 3.494331e-51 | -8.615850e-47 |
| Msa0071250 | Msa0502090 | 0.809609 | 1.738630e-50 | -8.615850e-47 |
| Msa0075500 | Msa0502090 | 0.836898 | 7.145716e-57 | -8.615850e-47 |
| Msa0076120 | Msa0502090 | 0.818791 | 1.630422e-52 | -8.615850e-47 |
| Msa0077900 | Msa0502090 | 0.817584 | 3.056976e-52 | -8.615850e-47 |
| Msa0090360 | Msa0502090 | 0.801084 | 1.063920e-48 | -8.615850e-47 |
| Msa0096700 | Msa0502090 | 0.854341 | 1.312720e-61 | -8.615850e-47 |
| Msa0098930 | Msa0502090 | 0.807444 | 5.039451e-50 | -8.615850e-47 |
| Msa0098990 | Msa0502090 | 0.821304 | 4.334428e-53 | -8.615850e-47 |
| Msa0105620 | Msa0502090 | 0.801409 | 9.125925e-49 | -8.615850e-47 |
| Msa0115400 | Msa0502090 | 0.825002 | 5.942537e-54 | -8.615850e-47 |
| Msa0127020 | Msa0502090 | 0.827298 | 1.690123e-54 | -8.615850e-47 |
| Msa0133410 | Msa0502090 | 0.823429 | 1.391694e-53 | -8.615850e-47 |
| Msa0137550 | Msa0502090 | 0.821180 | 4.629542e-53 | -8.615850e-47 |
| Msa0137840 | Msa0502090 | 0.801537 | 8.591806e-49 | -8.615850e-47 |
| Msa0138020 | Msa0502090 | 0.809581 | 1.762623e-50 | -8.615850e-47 |
| Msa0146770 | Msa0502090 | 0.816370 | 5.727442e-52 | -8.615850e-47 |
| Msa0149440 | Msa0502090 | 0.810772 | 9.763281e-51 | -8.615850e-47 |
| Msa0150300 | Msa0502090 | 0.804124 | 2.510913e-49 | -8.615850e-47 |
| Msa0150820 | Msa0502090 | 0.801054 | 1.078989e-48 | -8.615850e-47 |
| Msa0159170 | Msa0502090 | 0.820476 | 6.724326e-53 | -8.615850e-47 |
| Msa0168230 | Msa0502090 | 0.809205 | 2.122576e-50 | -8.615850e-47 |
| Msa0169280 | Msa0502090 | 0.826575 | 2.516141e-54 | -8.615850e-47 |
| Msa0169300 | Msa0502090 | 0.830457 | 2.905557e-55 | -8.615850e-47 |
| Msa0170430 | Msa0502090 | 0.810772 | 9.763281e-51 | -8.615850e-47 |
| Msa0179190 | Msa0502090 | 0.803967 | 2.707524e-49 | -8.615850e-47 |
| Msa0184040 | Msa0502090 | 0.804222 | 2.395446e-49 | -8.615850e-47 |
| Msa0184820 | Msa0502090 | 0.826009 | 3.432472e-54 | -8.615850e-47 |
| Msa0184880 | Msa0502090 | 0.808952 | 2.405347e-50 | -8.615850e-47 |
| Msa0187490 | Msa0502090 | 0.811406 | 7.112429e-51 | -8.615850e-47 |
| Msa0189300 | Msa0502090 | 0.836097 | 1.142533e-56 | -8.615850e-47 |
| Msa0202410 | Msa0502090 | 0.831475 | 1.634994e-55 | -8.615850e-47 |
| Msa0207030 | Msa0502090 | 0.826155 | 3.168644e-54 | -8.615850e-47 |
| Msa0223160 | Msa0502090 | 0.800798 | 1.217069e-48 | -8.615850e-47 |
| Msa0228120 | Msa0502090 | 0.805394 | 1.363572e-49 | -8.615850e-47 |
| Msa0228170 | Msa0502090 | 0.806442 | 8.210844e-50 | -8.615850e-47 |
| Msa0229170 | Msa0502090 | 0.812476 | 4.159735e-51 | -8.615850e-47 |
| Msa0231660 | Msa0502090 | 0.824151 | 9.428178e-54 | -8.615850e-47 |
| Msa0233370 | Msa0502090 | 0.804181 | 2.443643e-49 | -8.615850e-47 |
| Msa0365700 | Msa0502090 | 0.823759 | 1.164996e-53 | -8.615850e-47 |
| Msa0376600 | Msa0502090 | 0.804983 | 1.662159e-49 | -8.615850e-47 |
| Msa0380100 | Msa0502090 | 0.804163 | 2.464378e-49 | -8.615850e-47 |
| Msa0388700 | Msa0502090 | 0.866611 | 2.512577e-65 | -8.615850e-47 |
| Msa0392270 | Msa0502090 | 0.812094 | 5.039486e-51 | -8.615850e-47 |
| Msa0409090 | Msa0502090 | 0.849689 | 2.752357e-60 | -8.615850e-47 |
| Msa0421880 | Msa0502090 | 0.805444 | 1.330936e-49 | -8.615850e-47 |
| Msa0427580 | Msa0502090 | 0.837062 | 6.488646e-57 | -8.615850e-47 |
| Msa0430060 | Msa0502090 | 0.807442 | 5.045655e-50 | -8.615850e-47 |
| Msa0430150 | Msa0502090 | 0.803142 | 4.014657e-49 | -8.615850e-47 |
| Msa0467220 | Msa0502090 | 0.812029 | 5.207909e-51 | -8.615850e-47 |
| Msa0467780 | Msa0502090 | 0.820593 | 6.319931e-53 | -8.615850e-47 |
| Msa0481030 | Msa0502090 | 0.843211 | 1.610431e-58 | -8.615850e-47 |
| Msa0481280 | Msa0502090 | 0.843819 | 1.108532e-58 | -8.615850e-47 |
| Msa0481530 | Msa0502090 | 0.803675 | 3.113582e-49 | -8.615850e-47 |
| Msa0482130 | Msa0502090 | 0.863907 | 1.779721e-64 | -8.615850e-47 |
| Msa0241140 | Msa0502090 | 0.807267 | 5.495822e-50 | -8.615850e-47 |
| Msa0244980 | Msa0502090 | 0.820383 | 7.062897e-53 | -8.615850e-47 |
| Msa0245430 | Msa0502090 | 0.806637 | 7.468375e-50 | -8.615850e-47 |
| Msa0262370 | Msa0502090 | 0.828982 | 6.640390e-55 | -8.615850e-47 |
| Msa0271530 | Msa0502090 | 0.822272 | 2.588648e-53 | -8.615850e-47 |
| Msa0279220 | Msa0502090 | 0.809107 | 2.228422e-50 | -8.615850e-47 |
| Msa0279240 | Msa0502090 | 0.808143 | 3.578930e-50 | -8.615850e-47 |
| Msa0285330 | Msa0502090 | 0.844889 | 5.715155e-59 | -8.615850e-47 |
| Msa0296050 | Msa0502090 | -0.810017 | 1.420470e-50 | -8.615850e-47 |
| Msa0300150 | Msa0502090 | 0.822403 | 2.413930e-53 | -8.615850e-47 |
| Msa0303460 | Msa0502090 | 0.800695 | 1.277591e-48 | -8.615850e-47 |
| Msa0309750 | Msa0502090 | 0.818334 | 2.069474e-52 | -8.615850e-47 |
| Msa0322240 | Msa0502090 | 0.824141 | 9.480249e-54 | -8.615850e-47 |
| Msa0324240 | Msa0502090 | 0.816280 | 5.997403e-52 | -8.615850e-47 |
| Msa0325590 | Msa0502090 | 0.824995 | 5.964754e-54 | -8.615850e-47 |
| Msa0333850 | Msa0502090 | -0.810925 | 9.043591e-51 | -8.615850e-47 |
| Msa0333970 | Msa0502090 | -0.815906 | 7.269720e-52 | -8.615850e-47 |
| Msa0337590 | Msa0502090 | 0.813399 | 2.610777e-51 | -8.615850e-47 |
| Msa0351990 | Msa0502090 | 0.823009 | 1.744347e-53 | -8.615850e-47 |
| Msa0489410 | Msa0502090 | 0.838150 | 3.411543e-57 | -8.615850e-47 |
| Msa0497490 | Msa0502090 | 0.802621 | 5.142241e-49 | -8.615850e-47 |
| Msa0500470 | Msa0502090 | 0.832845 | 7.492331e-56 | -8.615850e-47 |
| Msa0502090 | Msa0511490 | 0.829355 | 5.391836e-55 | -8.615850e-47 |
| Msa0502090 | Msa0514180 | 0.814254 | 1.691825e-51 | -8.615850e-47 |
| Msa0502090 | Msa0518170 | 0.827917 | 1.200603e-54 | -8.615850e-47 |
| Msa0502090 | Msa0523050 | 0.817691 | 2.891693e-52 | -8.615850e-47 |
| Msa0502090 | Msa0542090 | 0.864355 | 1.290511e-64 | -8.615850e-47 |
| Msa0502090 | Msa0542130 | 0.862984 | 3.440753e-64 | -8.615850e-47 |
| Msa0502090 | Msa0554290 | 0.847902 | 8.619260e-60 | -8.615850e-47 |
| Msa0502090 | Msa0581110 | 0.810545 | 1.092962e-50 | -8.615850e-47 |
| Msa0502090 | Msa0581280 | 0.835281 | 1.838805e-56 | -8.615850e-47 |
| Msa0502090 | Msa0589190 | 0.810394 | 1.178120e-50 | -8.615850e-47 |
| Msa0502090 | Msa0600080 | 0.808363 | 3.212547e-50 | -8.615850e-47 |
| Msa0502090 | Msa0605000 | 0.847618 | 1.031680e-59 | -8.615850e-47 |
| Msa0502090 | Msa0609000 | 0.807749 | 4.341839e-50 | -8.615850e-47 |
| Msa0502090 | Msa0617640 | 0.801061 | 1.075697e-48 | -8.615850e-47 |
| Msa0502090 | Msa0618930 | 0.821892 | 3.170257e-53 | -8.615850e-47 |
| Msa0502090 | Msa0618950 | 0.815110 | 1.093164e-51 | -8.615850e-47 |
| Msa0502090 | Msa0618970 | 0.812856 | 3.434509e-51 | -8.615850e-47 |
| Msa0502090 | Msa0634890 | 0.800241 | 1.580417e-48 | -8.615850e-47 |
| Msa0502090 | Msa0649490 | 0.800763 | 1.237410e-48 | -8.615850e-47 |
| Msa0502090 | Msa0654620 | 0.802526 | 5.380709e-49 | -8.615850e-47 |
| Msa0502090 | Msa0672550 | 0.817650 | 2.954786e-52 | -8.615850e-47 |
| Msa0502090 | Msa0685140 | 0.857363 | 1.717747e-62 | -8.615850e-47 |
| Msa0502090 | Msa0689260 | 0.831933 | 1.260232e-55 | -8.615850e-47 |
| Msa0502090 | Msa0689440 | 0.814712 | 1.339518e-51 | -8.615850e-47 |
| Msa0502090 | Msa0691290 | 0.858066 | 1.063343e-62 | -8.615850e-47 |
| Msa0502090 | Msa0698800 | 0.814046 | 1.880874e-51 | -8.615850e-47 |
| Msa0502090 | Msa0702370 | 0.807461 | 4.999310e-50 | -8.615850e-47 |
| Msa0502090 | Msa0709160 | 0.840909 | 6.546598e-58 | -8.615850e-47 |
| Msa0502090 | Msa0711780 | 0.856691 | 2.710178e-62 | -8.615850e-47 |
| Msa0502090 | Msa0715650 | 0.822565 | 2.213420e-53 | -8.615850e-47 |
| Msa0502090 | Msa0715700 | 0.804294 | 2.315083e-49 | -8.615850e-47 |
| Msa0502090 | Msa0719420 | 0.819963 | 8.810416e-53 | -8.615850e-47 |
| Msa0502090 | Msa0719610 | 0.816626 | 5.018662e-52 | -8.615850e-47 |
| Msa0502090 | Msa0726080 | 0.812074 | 5.090727e-51 | -8.615850e-47 |
| Msa0502090 | Msa0738440 | 0.801284 | 9.681463e-49 | -8.615850e-47 |
| Msa0502090 | Msa0748170 | 0.803963 | 2.712616e-49 | -8.615850e-47 |
| Msa0502090 | Msa0763330 | 0.852023 | 6.058540e-61 | -8.615850e-47 |
| Msa0502090 | Msa0765180 | 0.812244 | 4.674040e-51 | -8.615850e-47 |
| Msa0502090 | Msa0772480 | 0.864347 | 1.298359e-64 | -8.615850e-47 |
| Msa0502090 | Msa0789680 | 0.819941 | 8.916245e-53 | -8.615850e-47 |
| Msa0502090 | Msa0793390 | 0.807201 | 5.675763e-50 | -8.615850e-47 |
| Msa0502090 | Msa0794670 | 0.860388 | 2.139389e-63 | -8.615850e-47 |
| Msa0502090 | Msa0796260 | 0.810023 | 1.416690e-50 | -8.615850e-47 |
| Msa0502090 | Msa0797250 | 0.803246 | 3.819576e-49 | -8.615850e-47 |
| Msa0502090 | Msa0798440 | 0.862116 | 6.364814e-64 | -8.615850e-47 |
| Msa0502090 | Msa0800370 | 0.828939 | 6.800874e-55 | -8.615850e-47 |
| Msa0502090 | Msa0802410 | 0.839438 | 1.584604e-57 | -8.615850e-47 |
| Msa0502090 | Msa0819060 | 0.814328 | 1.628931e-51 | -8.615850e-47 |
| Msa0502090 | Msa0827280 | 0.819147 | 1.352904e-52 | -8.615850e-47 |
| Msa0502090 | Msa0830540 | 0.875569 | 2.777957e-68 | -8.615850e-47 |
| Msa0502090 | Msa0841100 | 0.819924 | 8.993412e-53 | -8.615850e-47 |
| Msa0502090 | Msa0846230 | 0.817029 | 4.076439e-52 | -8.615850e-47 |
| Msa0502090 | Msa0859180 | 0.822448 | 2.356559e-53 | -8.615850e-47 |
| Msa0502090 | Msa0860030 | -0.803710 | 3.061550e-49 | -8.615850e-47 |
| Msa0502090 | Msa0876810 | 0.802251 | 6.128861e-49 | -8.615850e-47 |
| Msa0502090 | Msa0880040 | 0.823218 | 1.559459e-53 | -8.615850e-47 |
| Msa0502090 | Msa0880730 | 0.806166 | 9.387178e-50 | -8.615850e-47 |
| Msa0502090 | Msa0880810 | 0.808574 | 2.897341e-50 | -8.615850e-47 |
| Msa0502090 | Msa0897080 | 0.843432 | 1.406482e-58 | -8.615850e-47 |
| Msa0502090 | Msa0901450 | 0.841980 | 3.418349e-58 | -8.615850e-47 |
| Msa0502090 | Msa0925770 | 0.822749 | 2.005757e-53 | -8.615850e-47 |
| Msa0502090 | Msa0932570 | 0.824063 | 9.888987e-54 | -8.615850e-47 |
| Msa0502090 | Msa0945440 | 0.863355 | 2.640832e-64 | -8.615850e-47 |
| Msa0502090 | Msa0970530 | 0.872709 | 2.581523e-67 | -8.615850e-47 |
| Msa0502090 | Msa0970600 | 0.874815 | 5.027941e-68 | -8.615850e-47 |
| Msa0502090 | Msa0987370 | 0.837570 | 4.807263e-57 | -8.615850e-47 |
| Msa0502090 | Msa0989540 | 0.822573 | 2.203836e-53 | -8.615850e-47 |
| Msa0502090 | Msa1001350 | 0.840403 | 8.880568e-58 | -8.615850e-47 |
| Msa0502090 | Msa1024750 | 0.800292 | 1.543559e-48 | -8.615850e-47 |
| Msa0502090 | Msa1042660 | 0.801716 | 7.895948e-49 | -8.615850e-47 |
| Msa0502090 | Msa1063420 | 0.804034 | 2.622129e-49 | -8.615850e-47 |
| Msa0502090 | Msa1063510 | 0.810175 | 1.313415e-50 | -8.615850e-47 |
| Msa0502090 | Msa1080270 | 0.809343 | 1.982693e-50 | -8.615850e-47 |
| Msa0502090 | Msa1082250 | 0.816726 | 4.765667e-52 | -8.615850e-47 |
| Msa0502090 | Msa1088290 | 0.814537 | 1.464555e-51 | -8.615850e-47 |
| Msa0502090 | Msa1089320 | 0.836846 | 7.364650e-57 | -8.615850e-47 |
| Msa0502090 | Msa1100720 | 0.805951 | 1.041907e-49 | -8.615850e-47 |
| Msa0502090 | Msa1109680 | 0.802020 | 6.838806e-49 | -8.615850e-47 |
| Msa0502090 | Msa1126830 | 0.808094 | 3.666636e-50 | -8.615850e-47 |
| Msa0502090 | Msa1128570 | 0.821373 | 4.180317e-53 | -8.615850e-47 |
| Msa0502090 | Msa1133400 | 0.807002 | 6.252212e-50 | -8.615850e-47 |
| Msa0502090 | Msa1144040 | 0.841466 | 4.672150e-58 | -8.615850e-47 |
| Msa0502090 | Msa1160590 | 0.881370 | 2.539006e-70 | -8.615850e-47 |
| Msa0502090 | Msa1181250 | 0.826581 | 2.507399e-54 | -8.615850e-47 |
| Msa0502090 | Msa1181330 | 0.825829 | 3.786280e-54 | -8.615850e-47 |
| Msa0502090 | Msa1207310 | 0.819417 | 1.174552e-52 | -8.615850e-47 |
| Msa0502090 | Msa1208380 | 0.812695 | 3.725282e-51 | -8.615850e-47 |
| Msa0502090 | Msa1208880 | 0.816514 | 5.317022e-52 | -8.615850e-47 |
| Msa0502090 | Msa1209200 | 0.829522 | 4.911812e-55 | -8.615850e-47 |
| Msa0502090 | Msa1209260 | 0.828293 | 9.744295e-55 | -8.615850e-47 |
| Msa0502090 | Msa1209760 | 0.866621 | 2.493500e-65 | -8.615850e-47 |
| Msa0502090 | Msa1217470 | 0.816700 | 4.831188e-52 | -8.615850e-47 |
| Msa0502090 | Msa1218500 | 0.818341 | 2.061902e-52 | -8.615850e-47 |
| Msa0502090 | Msa1218580 | 0.807114 | 5.920548e-50 | -8.615850e-47 |
| Msa0502090 | Msa1219170 | 0.820670 | 6.066344e-53 | -8.615850e-47 |
| Msa0502090 | Msa1224810 | 0.800663 | 1.296626e-48 | -8.615850e-47 |
| Msa0502090 | Msa1226470 | 0.810039 | 1.405289e-50 | -8.615850e-47 |
| Msa0502090 | Msa1245930 | 0.823007 | 1.746001e-53 | -8.615850e-47 |
| Msa0502090 | Msa1250110 | 0.805663 | 1.197497e-49 | -8.615850e-47 |
| Msa0502090 | Msa1259060 | 0.826885 | 2.121860e-54 | -8.615850e-47 |
| Msa0502090 | Msa1264210 | 0.814617 | 1.406516e-51 | -8.615850e-47 |
| Msa0502090 | Msa1265630 | 0.803060 | 4.173364e-49 | -8.615850e-47 |
| Msa0502090 | Msa1270660 | 0.815994 | 6.948606e-52 | -8.615850e-47 |
| Msa0502090 | Msa1270730 | 0.804420 | 2.179339e-49 | -8.615850e-47 |
| Msa0502090 | Msa1294070 | 0.844739 | 6.272488e-59 | -8.615850e-47 |
| Msa0502090 | Msa1295930 | 0.813660 | 2.287877e-51 | -8.615850e-47 |
| Msa0502090 | Msa1307180 | 0.812439 | 4.237055e-51 | -8.615850e-47 |
| Msa0502090 | Msa1315750 | 0.833875 | 4.147516e-56 | -8.615850e-47 |
| Msa0502090 | Msa1316360 | 0.819944 | 8.899550e-53 | -8.615850e-47 |
| Msa0502090 | Msa1331320 | 0.808170 | 3.533243e-50 | -8.615850e-47 |
| Msa0502090 | Msa1331350 | 0.804751 | 1.858217e-49 | -8.615850e-47 |
| Msa0502090 | Msa1332590 | 0.815910 | 7.255248e-52 | -8.615850e-47 |
| Msa0502090 | Msa1336560 | 0.825631 | 4.219735e-54 | -8.615850e-47 |
| Msa0502090 | Msa1337480 | 0.801229 | 9.937627e-49 | -8.615850e-47 |
| Msa0502090 | Msa1358250 | 0.828107 | 1.080439e-54 | -8.615850e-47 |
| Msa0502090 | Msa1359970 | 0.831578 | 1.541987e-55 | -8.615850e-47 |
| Msa0502090 | Msa1362090 | 0.832661 | 8.322860e-56 | -8.615850e-47 |
| Msa0502090 | Msa1364210 | 0.836573 | 8.646289e-57 | -8.615850e-47 |
| Msa0502090 | Msa1369890 | 0.801046 | 1.083012e-48 | -8.615850e-47 |
| Msa0502090 | Msa1376130 | 0.801450 | 8.951471e-49 | -8.615850e-47 |
| Msa0502090 | Msa1377570 | 0.801003 | 1.105060e-48 | -8.615850e-47 |
| Msa0502090 | Msa1383740 | 0.805740 | 1.153588e-49 | -8.615850e-47 |
| Msa0502090 | Msa1392780 | 0.818641 | 1.762629e-52 | -8.615850e-47 |
| Msa0502090 | Msa1400220 | 0.820815 | 5.618707e-53 | -8.615850e-47 |
| Msa0502090 | Msa1400580 | 0.820165 | 7.920679e-53 | -8.615850e-47 |
| Msa0502090 | Msa1412130 | 0.804434 | 2.164523e-49 | -8.615850e-47 |
| Msa0502090 | Msa1419870 | 0.881664 | 1.989255e-70 | -8.615850e-47 |
| Msa0502090 | Msa1428780 | 0.814534 | 1.467186e-51 | -8.615850e-47 |
| Msa0502090 | Msa1428880 | 0.828240 | 1.003300e-54 | -8.615850e-47 |
| Msa0502090 | Msa1436520 | 0.833403 | 5.441838e-56 | -8.615850e-47 |
| Msa0502090 | Msa1436600 | 0.804575 | 2.022907e-49 | -8.615850e-47 |
| Msa0502090 | Msa1457920 | 0.836881 | 7.217226e-57 | -8.615850e-47 |
| Msa0502090 | Msa1458810 | 0.866702 | 2.350997e-65 | -8.615850e-47 |
| Msa0502090 | Msa1463600 | 0.803933 | 2.751526e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0502090 | MtrunA17_Chr3g0100051 | 96.333 | 300 | 11 | 0 | 1 | 300 | 1 | 300 | 0.0 | 570 |
| Msa0502090 | MtrunA17_Chr5g0444801 | 56.358 | 346 | 99 | 9 | 1 | 299 | 1 | 341 | 7.43e-103 | 304 |
| Msa0502090 | MtrunA17_Chr3g0100041 | 75.000 | 52 | 10 | 1 | 1 | 49 | 1 | 52 | 6.26e-14 | 71.6 |
| Msa0502090 | MtrunA17_Chr7g0254481 | 25.243 | 309 | 166 | 10 | 8 | 289 | 27 | 297 | 2.21e-11 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0502090 | AT5G55200.1 | 53.398 | 309 | 125 | 6 | 1 | 300 | 1 | 299 | 6.23e-101 | 298 |
| Msa0502090 | AT4G26780.1 | 53.774 | 318 | 115 | 5 | 1 | 290 | 1 | 314 | 2.01e-98 | 293 |
Find 101 sgRNAs with CRISPR-Local
Find 339 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGAAATTGGAAGGAAAATT+AGG | 0.127195 | 3_4:-44060654 | None:intergenic |
| GATGTCTTCTCTTATATTTC+AGG | 0.138831 | 3_4:+44065089 | Msa0502090:three_prime_UTR |
| ACTAGATGTTGCTGACAATT+TGG | 0.201252 | 3_4:+44062136 | Msa0502090:CDS |
| TGAAGAAATTCTTGAGTAAT+TGG | 0.221015 | 3_4:+44064985 | Msa0502090:three_prime_UTR |
| GCTTGGAAGCATCGGGTATT+TGG | 0.222694 | 3_4:-44064417 | None:intergenic |
| GATTTGATTCCATGAGATTT+TGG | 0.243685 | 3_4:+44065143 | Msa0502090:three_prime_UTR |
| TCCTCATCAATTACCCAATA+AGG | 0.247948 | 3_4:+44060801 | Msa0502090:CDS |
| CTTCAGCCATGTCCGTTTAT+AGG | 0.263445 | 3_4:+44060683 | Msa0502090:exon |
| TATTGGAGAATACAACAAAT+TGG | 0.281629 | 3_4:-44061563 | None:intergenic |
| TTAATAATAACAAGAGTATA+TGG | 0.282805 | 3_4:+44065121 | Msa0502090:three_prime_UTR |
| TACAACAAATTGGCTTGAAT+TGG | 0.292554 | 3_4:-44061553 | None:intergenic |
| TCATCCTTGACTCCAAGATT+TGG | 0.307717 | 3_4:+44061589 | Msa0502090:CDS |
| GGATCAAATGGTTCATTTGT+AGG | 0.319847 | 3_4:-44064373 | None:intergenic |
| ACAAAGCAGATGAATGATTA+TGG | 0.320630 | 3_4:+44064960 | Msa0502090:exon |
| GGAGTCAAGGATGAACTTAT+TGG | 0.324056 | 3_4:-44061580 | None:intergenic |
| AGGAAAATTAGGGTTGGAAT+TGG | 0.324677 | 3_4:-44060643 | None:intergenic |
| TACTTCGTCCAGCAGAAGTT+GGG | 0.331630 | 3_4:+44064912 | Msa0502090:CDS |
| GCGGCTTGATCAGATTCTTT+AGG | 0.338808 | 3_4:-44062206 | None:intergenic |
| TTCAGCCATGTCCGTTTATA+GGG | 0.341805 | 3_4:+44060684 | Msa0502090:exon |
| TTACGAGGGAGATACCTTAT+TGG | 0.352778 | 3_4:-44060815 | None:intergenic |
| CTAGATGTTGCTGACAATTT+GGG | 0.355715 | 3_4:+44062137 | Msa0502090:CDS |
| AGAAATTGGAAGGAAAATTA+GGG | 0.361321 | 3_4:-44060653 | None:intergenic |
| GGGTCATCACTTGAAGATTC+AGG | 0.372737 | 3_4:-44061631 | None:intergenic |
| TCCAACAGTGCCTGGAGGCT+TGG | 0.389340 | 3_4:-44064434 | None:intergenic |
| AAGCTTTATTAATTCATCTC+TGG | 0.396766 | 3_4:-44061856 | None:intergenic |
| AGAGAGAAGCGTGAAGGTTC+TGG | 0.402674 | 3_4:-44060722 | None:intergenic |
| GGAAAATTAGGGTTGGAATT+GGG | 0.405724 | 3_4:-44060642 | None:intergenic |
| TCCAAGCCTCCAGGCACTGT+TGG | 0.408980 | 3_4:+44064433 | Msa0502090:CDS |
| TACGAGGGAGATACCTTATT+GGG | 0.413867 | 3_4:-44060814 | None:intergenic |
| ATTAGGGTTGGAATTGGGAT+TGG | 0.414038 | 3_4:-44060637 | None:intergenic |
| TTCATTCTGATCAACTGCCT+TGG | 0.415646 | 3_4:-44061674 | None:intergenic |
| TTATGCCTGTTTGGATCAAA+TGG | 0.423526 | 3_4:-44064385 | None:intergenic |
| TTATTTGTTAAAATCATTGC+GGG | 0.424936 | 3_4:+44065394 | Msa0502090:three_prime_UTR |
| GAGGAAAGGTACTGAATTGA+TGG | 0.426869 | 3_4:-44060783 | None:intergenic |
| AAGATGGCATTATGCCTGTT+TGG | 0.429437 | 3_4:-44064394 | None:intergenic |
| GAGGAAGAAAATCCAAATCT+TGG | 0.432992 | 3_4:-44061601 | None:intergenic |
| GAAGATCAAACCAGTGGATC+AGG | 0.435406 | 3_4:+44061709 | Msa0502090:CDS |
| AGAACAACTCCAACAGTGCC+TGG | 0.449363 | 3_4:-44064442 | None:intergenic |
| TGTGTAACCCCAACTTCTGC+TGG | 0.449996 | 3_4:-44064920 | None:intergenic |
| ACCACTCCTGAAAACACTTC+TGG | 0.450423 | 3_4:+44062229 | Msa0502090:CDS |
| GCCTGGAGGCTTGGAAGCAT+CGG | 0.451549 | 3_4:-44064425 | None:intergenic |
| ATGAACCATTTGATCCAAAC+AGG | 0.454025 | 3_4:+44064380 | Msa0502090:CDS |
| GATTGGAGAGGGAAAGGAAA+GGG | 0.454055 | 3_4:-44060620 | None:intergenic |
| TAAATGATGGAAAATTTGCT+TGG | 0.463124 | 3_4:-44060541 | None:intergenic |
| GGAAAGGGTTTATGAAATAG+AGG | 0.464539 | 3_4:-44060605 | None:intergenic |
| GGTTTATGAAATAGAGGAAA+AGG | 0.469375 | 3_4:-44060599 | None:intergenic |
| GTTGGAATTGGGATTGGAGA+GGG | 0.476327 | 3_4:-44060631 | None:intergenic |
| TCGAGAAAGTACCCTATAAA+CGG | 0.476409 | 3_4:-44060695 | None:intergenic |
| ACATACCCCACATTAAGTTC+AGG | 0.494563 | 3_4:+44065223 | Msa0502090:three_prime_UTR |
| CCCGATGCTTCCAAGCCTCC+AGG | 0.496526 | 3_4:+44064424 | Msa0502090:CDS |
| AAGAGCTTCTTCAGTTGTAA+AGG | 0.501918 | 3_4:+44062160 | Msa0502090:CDS |
| AATTGGGATTGGAGAGGGAA+AGG | 0.502556 | 3_4:-44060626 | None:intergenic |
| TAATTTGTCAAATGCGGAAA+GGG | 0.503232 | 3_4:+44065064 | Msa0502090:three_prime_UTR |
| CCTGGAGGCTTGGAAGCATC+GGG | 0.503855 | 3_4:-44064424 | None:intergenic |
| AGCAACATCTAGTAAACTCT+TGG | 0.505918 | 3_4:-44062126 | None:intergenic |
| GATCAGAATGAAGAAGGTAA+AGG | 0.506235 | 3_4:+44061685 | Msa0502090:CDS |
| AATAAAGCTTGTTACTGAGA+AGG | 0.506809 | 3_4:+44061869 | Msa0502090:CDS |
| AGTGAAGGGAAAATAAATGA+TGG | 0.522219 | 3_4:-44060554 | None:intergenic |
| GAGAGCTCCTGAACTTAATG+TGG | 0.526562 | 3_4:-44065230 | None:intergenic |
| GTACTTCGTCCAGCAGAAGT+TGG | 0.529390 | 3_4:+44064911 | Msa0502090:CDS |
| GAAGTTGAAGCACAAAGAGA+TGG | 0.529951 | 3_4:+44061902 | Msa0502090:CDS |
| AAGAAGAAGAAGAAATTGGA+AGG | 0.531236 | 3_4:-44060663 | None:intergenic |
| ATTGGAAGGAAAATTAGGGT+TGG | 0.535469 | 3_4:-44060649 | None:intergenic |
| AGATGGAGAATGTCATGGAC+AGG | 0.536791 | 3_4:+44061961 | Msa0502090:CDS |
| TATAGTTGACTCTATTGTAG+TGG | 0.537329 | 3_4:+44065193 | Msa0502090:three_prime_UTR |
| TGAAGACAACCAAAATCTCA+TGG | 0.537916 | 3_4:-44065152 | None:intergenic |
| AAATCCAAATCTTGGAGTCA+AGG | 0.539566 | 3_4:-44061593 | None:intergenic |
| TGAAGATTCAGGTGAGGCCG+AGG | 0.545572 | 3_4:-44061620 | None:intergenic |
| TCTGCGTACTTATGCGGAGA+TGG | 0.546823 | 3_4:+44061944 | Msa0502090:CDS |
| GCAGTTGATCAGAATGAAGA+AGG | 0.554262 | 3_4:+44061679 | Msa0502090:CDS |
| ATTGGGTAATTGATGAGGAA+AGG | 0.561572 | 3_4:-44060797 | None:intergenic |
| TTATTCAGATTCAGATGTAG+AGG | 0.563147 | 3_4:+44061818 | Msa0502090:intron |
| CTTATTTGTTAAAATCATTG+CGG | 0.563600 | 3_4:+44065393 | Msa0502090:three_prime_UTR |
| AAAGTGGTGGAAAGAGGTTG+TGG | 0.570044 | 3_4:-44060757 | None:intergenic |
| AGCATCGGGTATTTGGAAGA+TGG | 0.570393 | 3_4:-44064410 | None:intergenic |
| AGTTGGGGTTACACATGAAG+TGG | 0.570863 | 3_4:+44064928 | Msa0502090:CDS |
| ACCTTATTGGGTAATTGATG+AGG | 0.571309 | 3_4:-44060802 | None:intergenic |
| GTAATTTGTCAAATGCGGAA+AGG | 0.571574 | 3_4:+44065063 | Msa0502090:three_prime_UTR |
| TAGACCCTAACCTGATCCAC+TGG | 0.577941 | 3_4:-44061719 | None:intergenic |
| CACTGTTGGAGTTGTTCTCA+AGG | 0.578915 | 3_4:+44064447 | Msa0502090:CDS |
| TGCGGAGATGGAGAATGTCA+TGG | 0.579947 | 3_4:+44061956 | Msa0502090:CDS |
| AGAGCTCCTGAACTTAATGT+GGG | 0.580871 | 3_4:-44065229 | None:intergenic |
| CGAAGCAGAGAGAAGCGTGA+AGG | 0.592243 | 3_4:-44060728 | None:intergenic |
| TGAACTACATTAAAAGCCAT+CGG | 0.599067 | 3_4:-44065015 | None:intergenic |
| TTAACAAATAAGCAAGTGAG+TGG | 0.600635 | 3_4:-44065382 | None:intergenic |
| GACTGAGAAACAACTTGCAG+AGG | 0.606225 | 3_4:+44062265 | Msa0502090:CDS |
| GGTTGGAATTGGGATTGGAG+AGG | 0.608036 | 3_4:-44060632 | None:intergenic |
| TAAAGTTCTGCGTACTTATG+CGG | 0.617863 | 3_4:+44061938 | Msa0502090:CDS |
| GTGAGTGGTAGCGAGAGTGT+TGG | 0.618119 | 3_4:-44065367 | None:intergenic |
| ACTTCGTCCAGCAGAAGTTG+GGG | 0.622891 | 3_4:+44064913 | Msa0502090:CDS |
| GAGCTGTAATTTGTCAAATG+CGG | 0.622927 | 3_4:+44065058 | Msa0502090:three_prime_UTR |
| CTCCTGAAAACACTTCTGGA+AGG | 0.623007 | 3_4:+44062233 | Msa0502090:CDS |
| GGATTGGAGAGGGAAAGGAA+AGG | 0.629621 | 3_4:-44060621 | None:intergenic |
| AAAGGTGAAGATCAAACCAG+TGG | 0.650547 | 3_4:+44061703 | Msa0502090:CDS |
| TGGGGTTACACATGAAGTGG+AGG | 0.652811 | 3_4:+44064931 | Msa0502090:CDS |
| ATCACTTGAAGATTCAGGTG+AGG | 0.657168 | 3_4:-44061626 | None:intergenic |
| AAGTACCCTATAAACGGACA+TGG | 0.685135 | 3_4:-44060689 | None:intergenic |
| TATTTGTTAAAATCATTGCG+GGG | 0.694636 | 3_4:+44065395 | Msa0502090:three_prime_UTR |
| GAGCTCCTGAACTTAATGTG+GGG | 0.705627 | 3_4:-44065228 | None:intergenic |
| ACAACTCCAACAGTGCCTGG+AGG | 0.719903 | 3_4:-44064439 | None:intergenic |
| GGACAGGACTAATCGCAATG+CGG | 0.753480 | 3_4:+44061977 | Msa0502090:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATTGAATTAAGTTTAAATT+TGG | + | chr3_4:44060958-44060977 | Msa0502090:intron | 10.0% |
| !! | TTATTTCATTTATTTAGATT+TGG | + | chr3_4:44063438-44063457 | Msa0502090:intron | 10.0% |
| !! | AAATAGAAAAGGAAAATTTA+GGG | - | chr3_4:44060917-44060936 | None:intergenic | 15.0% |
| !! | AAAATAGAAAAGGAAAATTT+AGG | - | chr3_4:44060918-44060937 | None:intergenic | 15.0% |
| !! | AAGTAAATAAAGTATAATCA+GGG | - | chr3_4:44060989-44061008 | None:intergenic | 15.0% |
| !! | AAAGTAAATAAAGTATAATC+AGG | - | chr3_4:44060990-44061009 | None:intergenic | 15.0% |
| !!! | TGATTATACTTTATTTACTT+TGG | + | chr3_4:44060989-44061008 | Msa0502090:intron | 15.0% |
| !! | TAGATTAATGATAGAAAAAT+AGG | + | chr3_4:44062436-44062455 | Msa0502090:intron | 15.0% |
| !!! | AAAGAAAAAAATATTTGTTG+CGG | - | chr3_4:44063198-44063217 | None:intergenic | 15.0% |
| !!! | TTGTTATTTACGATTTTTTT+TGG | - | chr3_4:44064184-44064203 | None:intergenic | 15.0% |
| !!! | TTTTGTAATTTGTATTGAAA+GGG | - | chr3_4:44064574-44064593 | None:intergenic | 15.0% |
| !!! | TTAATAATAACAAGAGTATA+TGG | + | chr3_4:44065121-44065140 | Msa0502090:three_prime_UTR | 15.0% |
| !!! | TTTTTTATTCAGAATTACGA+GGG | - | chr3_4:44060832-44060851 | None:intergenic | 20.0% |
| !!! | ATTTTTTATTCAGAATTACG+AGG | - | chr3_4:44060833-44060852 | None:intergenic | 20.0% |
| !!! | TTTATTTACTTTGGATGTTT+TGG | + | chr3_4:44060998-44061017 | Msa0502090:intron | 20.0% |
| !! | ATATAGAAAAAGGGAATTTA+GGG | - | chr3_4:44061059-44061078 | None:intergenic | 20.0% |
| !! | AATATAGAAAAAGGGAATTT+AGG | - | chr3_4:44061060-44061079 | None:intergenic | 20.0% |
| !!! | AATTCCCTTTTTCTATATTT+TGG | + | chr3_4:44061061-44061080 | Msa0502090:intron | 20.0% |
| !! | ATAGCCAAAATATAGAAAAA+GGG | - | chr3_4:44061068-44061087 | None:intergenic | 20.0% |
| !! | GTTTAAATTTATTGTTGATG+TGG | + | chr3_4:44061103-44061122 | Msa0502090:intron | 20.0% |
| !! | ATTAGGTTTACTTAACTATT+TGG | + | chr3_4:44061140-44061159 | Msa0502090:intron | 20.0% |
| !!! | ACATTTTTTTTGGTAAATCA+AGG | - | chr3_4:44061406-44061425 | None:intergenic | 20.0% |
| !! | ATAACTAAAACCAAAATTGA+GGG | - | chr3_4:44061477-44061496 | None:intergenic | 20.0% |
| !!! | TTCAAAAAAATTTGCTATAC+AGG | + | chr3_4:44062004-44062023 | Msa0502090:CDS | 20.0% |
| !!! | TTTCTTTTTGTTTTATACTG+TGG | + | chr3_4:44062040-44062059 | Msa0502090:intron | 20.0% |
| !!! | TTCTTTTTGTTTTATACTGT+GGG | + | chr3_4:44062041-44062060 | Msa0502090:intron | 20.0% |
| !! | ATAAATGTGGAAAATTGTAA+TGG | - | chr3_4:44062407-44062426 | None:intergenic | 20.0% |
| !! | TCTAGAAAATCATATAAATG+TGG | - | chr3_4:44062420-44062439 | None:intergenic | 20.0% |
| !! | ATTAATGATAGAAAAATAGG+TGG | + | chr3_4:44062439-44062458 | Msa0502090:intron | 20.0% |
| !!! | TTTAATTTTTTAGGCAACTA+CGG | - | chr3_4:44062513-44062532 | None:intergenic | 20.0% |
| !! | TTCTCTTACTATCAATATAT+TGG | + | chr3_4:44062808-44062827 | Msa0502090:intron | 20.0% |
| !! | TCTCTTACTATCAATATATT+GGG | + | chr3_4:44062809-44062828 | Msa0502090:intron | 20.0% |
| !!! | GTTGAAAAGAATTGTTATTT+TGG | - | chr3_4:44062963-44062982 | None:intergenic | 20.0% |
| !! | ATGTTAGGATTAAGAATAAA+GGG | - | chr3_4:44063026-44063045 | None:intergenic | 20.0% |
| !! | AATGTTAGGATTAAGAATAA+AGG | - | chr3_4:44063027-44063046 | None:intergenic | 20.0% |
| !! | GGTAGCTAAATATATATTAT+TGG | - | chr3_4:44063253-44063272 | None:intergenic | 20.0% |
| !! | AGTTATGTTTCAATAAATCT+AGG | + | chr3_4:44063518-44063537 | Msa0502090:intron | 20.0% |
| !! | GTTATGTTTCAATAAATCTA+GGG | + | chr3_4:44063519-44063538 | Msa0502090:intron | 20.0% |
| !! | TTATGTTTCAATAAATCTAG+GGG | + | chr3_4:44063520-44063539 | Msa0502090:intron | 20.0% |
| !! | AAGTTTATTGTTTAATGCAA+GGG | - | chr3_4:44063719-44063738 | None:intergenic | 20.0% |
| !!! | ATATTGGGATTTTAGTATAT+TGG | - | chr3_4:44064004-44064023 | None:intergenic | 20.0% |
| !!! | TTTAATAACTTGCATATTTG+TGG | - | chr3_4:44064100-44064119 | None:intergenic | 20.0% |
| !! | AAGTTATTAAAATTACCTGT+AGG | + | chr3_4:44064109-44064128 | Msa0502090:intron | 20.0% |
| !! | TAAATAATAAGATTGAACAC+TGG | - | chr3_4:44064297-44064316 | None:intergenic | 20.0% |
| !!! | ATATAGAAACATAGTTTTGA+AGG | - | chr3_4:44064544-44064563 | None:intergenic | 20.0% |
| !!! | TTCAAAACTATGTTTCTATA+TGG | + | chr3_4:44064543-44064562 | Msa0502090:intron | 20.0% |
| !!! | GTTTTGTAATTTGTATTGAA+AGG | - | chr3_4:44064575-44064594 | None:intergenic | 20.0% |
| !! | GTAAATAAAAAGGAATACTT+TGG | + | chr3_4:44064852-44064871 | Msa0502090:intron | 20.0% |
| !! | TATGATTTCCTAAAAAGAAA+GGG | - | chr3_4:44065270-44065289 | None:intergenic | 20.0% |
| !! | TTATGATTTCCTAAAAAGAA+AGG | - | chr3_4:44065271-44065290 | None:intergenic | 20.0% |
| !!! | TTTTTTATTTGATAAGTGCT+AGG | + | chr3_4:44065334-44065353 | Msa0502090:three_prime_UTR | 20.0% |
| !!! | CTTATTTGTTAAAATCATTG+CGG | + | chr3_4:44065393-44065412 | Msa0502090:three_prime_UTR | 20.0% |
| !!! | TTATTTGTTAAAATCATTGC+GGG | + | chr3_4:44065394-44065413 | Msa0502090:three_prime_UTR | 20.0% |
| !! | TAAATGATGGAAAATTTGCT+TGG | - | chr3_4:44060544-44060563 | None:intergenic | 25.0% |
| ! | AGAAATTGGAAGGAAAATTA+GGG | - | chr3_4:44060656-44060675 | None:intergenic | 25.0% |
| ! | AAGAAATTGGAAGGAAAATT+AGG | - | chr3_4:44060657-44060676 | None:intergenic | 25.0% |
| !!! | AAAGGAAAATTTAGGGTTTT+GGG | - | chr3_4:44060910-44060929 | None:intergenic | 25.0% |
| !!! | AAAAGGAAAATTTAGGGTTT+TGG | - | chr3_4:44060911-44060930 | None:intergenic | 25.0% |
| !! | CTTTTCTATTTTGTGATGTT+CGG | + | chr3_4:44060926-44060945 | Msa0502090:intron | 25.0% |
| !! | TTTTCTATTTTGTGATGTTC+GGG | + | chr3_4:44060927-44060946 | Msa0502090:intron | 25.0% |
| ! | CATAGCCAAAATATAGAAAA+AGG | - | chr3_4:44061069-44061088 | None:intergenic | 25.0% |
| ! | CATAACTAAAACCAAAATTG+AGG | - | chr3_4:44061478-44061497 | None:intergenic | 25.0% |
| ! | TATTGGAGAATACAACAAAT+TGG | - | chr3_4:44061566-44061585 | None:intergenic | 25.0% |
| !!! | AAGCTTTATTAATTCATCTC+TGG | - | chr3_4:44061859-44061878 | None:intergenic | 25.0% |
| !!! | TCTTTTTGTTTTATACTGTG+GGG | + | chr3_4:44062042-44062061 | Msa0502090:intron | 25.0% |
| !!! | GCTGCTTTCTTTAATTTTTT+AGG | - | chr3_4:44062522-44062541 | None:intergenic | 25.0% |
| ! | GAAGAGAATAAAAGAAAACT+AGG | + | chr3_4:44062553-44062572 | Msa0502090:intron | 25.0% |
| ! | AAAGCATATTACTAAGTTCA+TGG | - | chr3_4:44062612-44062631 | None:intergenic | 25.0% |
| !!! | TTAAGAGAAAGTGTTTTGTT+AGG | + | chr3_4:44062659-44062678 | Msa0502090:intron | 25.0% |
| ! | TATCAATATATTGGGATGAT+AGG | + | chr3_4:44062817-44062836 | Msa0502090:intron | 25.0% |
| ! | AGAATAAAGGGTTGTTTATT+AGG | - | chr3_4:44063014-44063033 | None:intergenic | 25.0% |
| !! | TTGACAAATAAACTCTTTTG+CGG | - | chr3_4:44063274-44063293 | None:intergenic | 25.0% |
| ! | GTTTATTTGTCAAAAATCAG+TGG | + | chr3_4:44063281-44063300 | Msa0502090:intron | 25.0% |
| ! | AGTTTATTGTTTAATGCAAG+GGG | - | chr3_4:44063718-44063737 | None:intergenic | 25.0% |
| ! | CAAGTTTATTGTTTAATGCA+AGG | - | chr3_4:44063720-44063739 | None:intergenic | 25.0% |
| ! | TGATTAATAGGAAACATGAT+GGG | - | chr3_4:44063928-44063947 | None:intergenic | 25.0% |
| ! | ATGATTAATAGGAAACATGA+TGG | - | chr3_4:44063929-44063948 | None:intergenic | 25.0% |
| ! | TATGTGTCGAAAGATATATT+GGG | - | chr3_4:44064019-44064038 | None:intergenic | 25.0% |
| ! | GTAAATTGATATCCATGTTT+AGG | + | chr3_4:44064211-44064230 | Msa0502090:intron | 25.0% |
| ! | TATTAAGTAATGTGCTTCAA+TGG | + | chr3_4:44064265-44064284 | Msa0502090:intron | 25.0% |
| ! | AATACTTTGGTTATATTTGC+AGG | + | chr3_4:44064865-44064884 | Msa0502090:intron | 25.0% |
| ! | TGAAGAAATTCTTGAGTAAT+TGG | + | chr3_4:44064985-44065004 | Msa0502090:three_prime_UTR | 25.0% |
| !! | TATTTGTTAAAATCATTGCG+GGG | + | chr3_4:44065395-44065414 | Msa0502090:three_prime_UTR | 25.0% |
| AGTGAAGGGAAAATAAATGA+TGG | - | chr3_4:44060557-44060576 | None:intergenic | 30.0% | |
| ATGAACAGAGAAAAAGTGAA+GGG | - | chr3_4:44060571-44060590 | None:intergenic | 30.0% | |
| TATGAACAGAGAAAAAGTGA+AGG | - | chr3_4:44060572-44060591 | None:intergenic | 30.0% | |
| GGTTTATGAAATAGAGGAAA+AGG | - | chr3_4:44060602-44060621 | None:intergenic | 30.0% | |
| AAGAAGAAGAAGAAATTGGA+AGG | - | chr3_4:44060666-44060685 | None:intergenic | 30.0% | |
| ACTGAATTGATGGAAAAAAG+TGG | - | chr3_4:44060776-44060795 | None:intergenic | 30.0% | |
| !!! | TAGGGTTTTATTAGGGTTTT+AGG | + | chr3_4:44060877-44060896 | Msa0502090:intron | 30.0% |
| !!! | AGGGTTTTATTAGGGTTTTA+GGG | + | chr3_4:44060878-44060897 | Msa0502090:intron | 30.0% |
| CGAACATCACAAAATAGAAA+AGG | - | chr3_4:44060928-44060947 | None:intergenic | 30.0% | |
| GGTTTACTTAACTATTTGGT+TGG | + | chr3_4:44061144-44061163 | Msa0502090:intron | 30.0% | |
| !! | ATATGTTTTTACGTACTCAC+CGG | - | chr3_4:44061186-44061205 | None:intergenic | 30.0% |
| TATCTACCAACAAAAAAACG+AGG | - | chr3_4:44061224-44061243 | None:intergenic | 30.0% | |
| !! | TACAACAAATTGGCTTGAAT+TGG | - | chr3_4:44061556-44061575 | None:intergenic | 30.0% |
| ! | AAGATTTGGATTTTCTTCCT+CGG | + | chr3_4:44061603-44061622 | Msa0502090:CDS | 30.0% |
| TTATTCAGATTCAGATGTAG+AGG | + | chr3_4:44061818-44061837 | Msa0502090:intron | 30.0% | |
| !! | AATAAAGCTTGTTACTGAGA+AGG | + | chr3_4:44061869-44061888 | Msa0502090:CDS | 30.0% |
| GCTATATCTCTTTAGTTGTT+AGG | + | chr3_4:44062306-44062325 | Msa0502090:intron | 30.0% | |
| ! | ATGTGGAAAATTGTAATGGA+AGG | - | chr3_4:44062403-44062422 | None:intergenic | 30.0% |
| ! | TTTGTTAGGAACCTTTCTTT+TGG | + | chr3_4:44062673-44062692 | Msa0502090:intron | 30.0% |
| CTTTCCATATACCAAAAGAA+AGG | - | chr3_4:44062687-44062706 | None:intergenic | 30.0% | |
| AAAGGGTTGTTTATTAGGAT+TGG | - | chr3_4:44063009-44063028 | None:intergenic | 30.0% | |
| CTTTCTTTATTACAACCATG+AGG | - | chr3_4:44063075-44063094 | None:intergenic | 30.0% | |
| GTAATAAAGAAAGACTGATC+AGG | + | chr3_4:44063082-44063101 | Msa0502090:intron | 30.0% | |
| !! | ATACAGTTGTTGATTTACTG+TGG | + | chr3_4:44063670-44063689 | Msa0502090:intron | 30.0% |
| GTTTATTGTTTAATGCAAGG+GGG | - | chr3_4:44063717-44063736 | None:intergenic | 30.0% | |
| ACATCTGTAGGATGATTAAT+AGG | - | chr3_4:44063940-44063959 | None:intergenic | 30.0% | |
| TTAATCATCCTACAGATGTT+AGG | + | chr3_4:44063941-44063960 | Msa0502090:intron | 30.0% | |
| ATTCTATTCCTAACATCTGT+AGG | - | chr3_4:44063952-44063971 | None:intergenic | 30.0% | |
| GTATGTGTCGAAAGATATAT+TGG | - | chr3_4:44064020-44064039 | None:intergenic | 30.0% | |
| ! | TTTTCAATCTACATTCCTAC+AGG | - | chr3_4:44064127-44064146 | None:intergenic | 30.0% |
| TTACAGGTACTTAAAAAGCA+CGG | + | chr3_4:44064334-44064353 | Msa0502090:intron | 30.0% | |
| !!! | AGCATGTAGTTTTGTACTTT+AGG | - | chr3_4:44064613-44064632 | None:intergenic | 30.0% |
| AAGTGTGATTGATCACATTT+AGG | - | chr3_4:44064722-44064741 | None:intergenic | 30.0% | |
| ! | AATGTGATCAATCACACTTT+TGG | + | chr3_4:44064723-44064742 | Msa0502090:intron | 30.0% |
| !!! | ACACTTTTGGTCTTGTTTTA+TGG | + | chr3_4:44064736-44064755 | Msa0502090:intron | 30.0% |
| CACGATGTGTGTAAATAAAA+AGG | + | chr3_4:44064842-44064861 | Msa0502090:intron | 30.0% | |
| ACAAAGCAGATGAATGATTA+TGG | + | chr3_4:44064960-44064979 | Msa0502090:exon | 30.0% | |
| ! | AGTAATTGGATATTTTCCGA+TGG | + | chr3_4:44064999-44065018 | Msa0502090:three_prime_UTR | 30.0% |
| TGAACTACATTAAAAGCCAT+CGG | - | chr3_4:44065018-44065037 | None:intergenic | 30.0% | |
| ! | TAATTTGTCAAATGCGGAAA+GGG | + | chr3_4:44065064-44065083 | Msa0502090:three_prime_UTR | 30.0% |
| GATGTCTTCTCTTATATTTC+AGG | + | chr3_4:44065089-44065108 | Msa0502090:three_prime_UTR | 30.0% | |
| ! | GATTTGATTCCATGAGATTT+TGG | + | chr3_4:44065143-44065162 | Msa0502090:three_prime_UTR | 30.0% |
| ! | TATAGTTGACTCTATTGTAG+TGG | + | chr3_4:44065193-44065212 | Msa0502090:three_prime_UTR | 30.0% |
| !! | AGTTTTGTCCCTTTCTTTTT+AGG | + | chr3_4:44065259-44065278 | Msa0502090:three_prime_UTR | 30.0% |
| TTAACAAATAAGCAAGTGAG+TGG | - | chr3_4:44065385-44065404 | None:intergenic | 30.0% | |
| !!! | GGGGCAAACATTTTTAAAAT+GGG | + | chr3_4:44065414-44065433 | Msa0502090:three_prime_UTR | 30.0% |
| GGAAAGGGTTTATGAAATAG+AGG | - | chr3_4:44060608-44060627 | None:intergenic | 35.0% | |
| GGAAAATTAGGGTTGGAATT+GGG | - | chr3_4:44060645-44060664 | None:intergenic | 35.0% | |
| AGGAAAATTAGGGTTGGAAT+TGG | - | chr3_4:44060646-44060665 | None:intergenic | 35.0% | |
| ATTGGAAGGAAAATTAGGGT+TGG | - | chr3_4:44060652-44060671 | None:intergenic | 35.0% | |
| GCTGAAGAAGAAGAAGAAAT+TGG | - | chr3_4:44060670-44060689 | None:intergenic | 35.0% | |
| !! | TCGAGAAAGTACCCTATAAA+CGG | - | chr3_4:44060698-44060717 | None:intergenic | 35.0% |
| GAATTGATGGAAAAAAGTGG+TGG | - | chr3_4:44060773-44060792 | None:intergenic | 35.0% | |
| ATTGGGTAATTGATGAGGAA+AGG | - | chr3_4:44060800-44060819 | None:intergenic | 35.0% | |
| TCCTCATCAATTACCCAATA+AGG | + | chr3_4:44060801-44060820 | Msa0502090:CDS | 35.0% | |
| ACCTTATTGGGTAATTGATG+AGG | - | chr3_4:44060805-44060824 | None:intergenic | 35.0% | |
| ! | TTTTCGCAATTTTGTGCTGT+AGG | + | chr3_4:44060858-44060877 | Msa0502090:intron | 35.0% |
| ! | TTTCGCAATTTTGTGCTGTA+GGG | + | chr3_4:44060859-44060878 | Msa0502090:intron | 35.0% |
| !!! | TTGTGCTGTAGGGTTTTATT+AGG | + | chr3_4:44060869-44060888 | Msa0502090:intron | 35.0% |
| !!! | TGTGCTGTAGGGTTTTATTA+GGG | + | chr3_4:44060870-44060889 | Msa0502090:intron | 35.0% |
| TAAACTAGCACACACATAAG+TGG | + | chr3_4:44061267-44061286 | Msa0502090:intron | 35.0% | |
| AAACTAGCACACACATAAGT+GGG | + | chr3_4:44061268-44061287 | Msa0502090:intron | 35.0% | |
| GTTATTGGGATCTATCTAAG+AGG | - | chr3_4:44061367-44061386 | None:intergenic | 35.0% | |
| AGATAGATCCCAATAACATG+AGG | + | chr3_4:44061370-44061389 | Msa0502090:intron | 35.0% | |
| GATAGATCCCAATAACATGA+GGG | + | chr3_4:44061371-44061390 | Msa0502090:intron | 35.0% | |
| ! | TGTGTATTGTCCCTCAATTT+TGG | + | chr3_4:44061464-44061483 | Msa0502090:intron | 35.0% |
| AAATCCAAATCTTGGAGTCA+AGG | - | chr3_4:44061596-44061615 | None:intergenic | 35.0% | |
| GAGGAAGAAAATCCAAATCT+TGG | - | chr3_4:44061604-44061623 | None:intergenic | 35.0% | |
| !!! | CTTTTTCGCTTGTTTTTGCA+GGG | - | chr3_4:44061654-44061673 | None:intergenic | 35.0% |
| AAAAACAAGCGAAAAAGCCA+AGG | + | chr3_4:44061657-44061676 | Msa0502090:CDS | 35.0% | |
| GATCAGAATGAAGAAGGTAA+AGG | + | chr3_4:44061685-44061704 | Msa0502090:CDS | 35.0% | |
| TAAAGTTCTGCGTACTTATG+CGG | + | chr3_4:44061938-44061957 | Msa0502090:CDS | 35.0% | |
| AGCAACATCTAGTAAACTCT+TGG | - | chr3_4:44062129-44062148 | None:intergenic | 35.0% | |
| ACTAGATGTTGCTGACAATT+TGG | + | chr3_4:44062136-44062155 | Msa0502090:CDS | 35.0% | |
| CTAGATGTTGCTGACAATTT+GGG | + | chr3_4:44062137-44062156 | Msa0502090:CDS | 35.0% | |
| AAGAGCTTCTTCAGTTGTAA+AGG | + | chr3_4:44062160-44062179 | Msa0502090:CDS | 35.0% | |
| ! | ACAACTGACTCTGAAAAGAA+TGG | - | chr3_4:44062350-44062369 | None:intergenic | 35.0% |
| ! | GAAAAATAGGTGGATTCTGA+AGG | + | chr3_4:44062449-44062468 | Msa0502090:intron | 35.0% |
| ! | GGAACCTTTCTTTTGGTATA+TGG | + | chr3_4:44062680-44062699 | Msa0502090:intron | 35.0% |
| ATGGAAAGAATTCCCAAAAC+TGG | + | chr3_4:44062699-44062718 | Msa0502090:intron | 35.0% | |
| TGGAAAGAATTCCCAAAACT+GGG | + | chr3_4:44062700-44062719 | Msa0502090:intron | 35.0% | |
| ! | ATTCATTTCTGCCCAGTTTT+GGG | - | chr3_4:44062714-44062733 | None:intergenic | 35.0% |
| ! | TATTCATTTCTGCCCAGTTT+TGG | - | chr3_4:44062715-44062734 | None:intergenic | 35.0% |
| ATTGCAAGAGAAGATACGAA+AGG | + | chr3_4:44062840-44062859 | Msa0502090:intron | 35.0% | |
| AGATGATAAACTTGCACTCA+AGG | + | chr3_4:44062873-44062892 | Msa0502090:intron | 35.0% | |
| TTATTACAACCATGAGGACA+AGG | - | chr3_4:44063069-44063088 | None:intergenic | 35.0% | |
| GATAGAATCCGATGGAAAAA+AGG | + | chr3_4:44063106-44063125 | Msa0502090:intron | 35.0% | |
| !!! | TTCATTGGCCTTTTTTCCAT+CGG | - | chr3_4:44063117-44063136 | None:intergenic | 35.0% |
| ! | GGGCTTTTAAGCAAAACTTA+GGG | + | chr3_4:44063540-44063559 | Msa0502090:intron | 35.0% |
| ! | GGCTTTTAAGCAAAACTTAG+GGG | + | chr3_4:44063541-44063560 | Msa0502090:intron | 35.0% |
| ! | GCTTTTAAGCAAAACTTAGG+GGG | + | chr3_4:44063542-44063561 | Msa0502090:intron | 35.0% |
| CAGGAAAAGAAATTGCTCTA+CGG | - | chr3_4:44063568-44063587 | None:intergenic | 35.0% | |
| CAACTGTATCTGTAACAACT+AGG | - | chr3_4:44063659-44063678 | None:intergenic | 35.0% | |
| ACTTGTATCTTTCACTGTTC+CGG | + | chr3_4:44063735-44063754 | Msa0502090:intron | 35.0% | |
| ACAGACACTTATGAAGAAAC+CGG | - | chr3_4:44063757-44063776 | None:intergenic | 35.0% | |
| AAGAACCAGAAAGTAATCCA+AGG | - | chr3_4:44063782-44063801 | None:intergenic | 35.0% | |
| ! | TTAATAGGAAACATGATGGG+TGG | - | chr3_4:44063925-44063944 | None:intergenic | 35.0% |
| TAGATAGACGAGCTTATCTT+AGG | - | chr3_4:44064055-44064074 | None:intergenic | 35.0% | |
| TATTTGTGGTCTACTCGTAA+TGG | - | chr3_4:44064086-44064105 | None:intergenic | 35.0% | |
| GGATCAAATGGTTCATTTGT+AGG | - | chr3_4:44064376-44064395 | None:intergenic | 35.0% | |
| ATGAACCATTTGATCCAAAC+AGG | + | chr3_4:44064380-44064399 | Msa0502090:CDS | 35.0% | |
| TTATGCCTGTTTGGATCAAA+TGG | - | chr3_4:44064388-44064407 | None:intergenic | 35.0% | |
| ! | ATTTTCAGTTCCTGCAAAGA+GGG | - | chr3_4:44064642-44064661 | None:intergenic | 35.0% |
| ! | AATTTTCAGTTCCTGCAAAG+AGG | - | chr3_4:44064643-44064662 | None:intergenic | 35.0% |
| CTTTGCAGGAACTGAAAATT+AGG | + | chr3_4:44064643-44064662 | Msa0502090:intron | 35.0% | |
| AGATGGAGAAATATCACGAA+TGG | - | chr3_4:44064805-44064824 | None:intergenic | 35.0% | |
| ! | TTCAGATTGATGGTATGAGA+TGG | - | chr3_4:44064822-44064841 | None:intergenic | 35.0% |
| ! | GAGCTGTAATTTGTCAAATG+CGG | + | chr3_4:44065058-44065077 | Msa0502090:three_prime_UTR | 35.0% |
| ! | GTAATTTGTCAAATGCGGAA+AGG | + | chr3_4:44065063-44065082 | Msa0502090:three_prime_UTR | 35.0% |
| TGAAGACAACCAAAATCTCA+TGG | - | chr3_4:44065155-44065174 | None:intergenic | 35.0% | |
| !! | CGGGGCAAACATTTTTAAAA+TGG | + | chr3_4:44065413-44065432 | Msa0502090:three_prime_UTR | 35.0% |
| ATTAGGGTTGGAATTGGGAT+TGG | - | chr3_4:44060640-44060659 | None:intergenic | 40.0% | |
| TTCAGCCATGTCCGTTTATA+GGG | + | chr3_4:44060684-44060703 | Msa0502090:exon | 40.0% | |
| AAGTACCCTATAAACGGACA+TGG | - | chr3_4:44060692-44060711 | None:intergenic | 40.0% | |
| ! | TGGAAAAAAGTGGTGGAAAG+AGG | - | chr3_4:44060766-44060785 | None:intergenic | 40.0% |
| !! | GAGGAAAGGTACTGAATTGA+TGG | - | chr3_4:44060786-44060805 | None:intergenic | 40.0% |
| TACGAGGGAGATACCTTATT+GGG | - | chr3_4:44060817-44060836 | None:intergenic | 40.0% | |
| TTACGAGGGAGATACCTTAT+TGG | - | chr3_4:44060818-44060837 | None:intergenic | 40.0% | |
| TATTGTTGATGTGGCACAAG+TGG | + | chr3_4:44061112-44061131 | Msa0502090:intron | 40.0% | |
| TGGCACAAGTGGTAGATATT+AGG | + | chr3_4:44061123-44061142 | Msa0502090:intron | 40.0% | |
| !!! | TGTCAGCCTCGTTTTTTTGT+TGG | + | chr3_4:44061215-44061234 | Msa0502090:intron | 40.0% |
| ! | TGTGTGTGCTAGTTTACAAG+TGG | - | chr3_4:44061263-44061282 | None:intergenic | 40.0% |
| AAACACCGAAATTCCTAGGT+TGG | - | chr3_4:44061313-44061332 | None:intergenic | 40.0% | |
| ! | CTCACAAGTTCTAACTCAAC+TGG | - | chr3_4:44061337-44061356 | None:intergenic | 40.0% |
| ACAGAGTCCCTCATGTTATT+GGG | - | chr3_4:44061381-44061400 | None:intergenic | 40.0% | |
| AACAGAGTCCCTCATGTTAT+TGG | - | chr3_4:44061382-44061401 | None:intergenic | 40.0% | |
| TGAGGGACAATACACAATCT+AGG | - | chr3_4:44061460-44061479 | None:intergenic | 40.0% | |
| GGAGTCAAGGATGAACTTAT+TGG | - | chr3_4:44061583-44061602 | None:intergenic | 40.0% | |
| TCATCCTTGACTCCAAGATT+TGG | + | chr3_4:44061589-44061608 | Msa0502090:CDS | 40.0% | |
| ATCACTTGAAGATTCAGGTG+AGG | - | chr3_4:44061629-44061648 | None:intergenic | 40.0% | |
| !!! | GCTTTTTCGCTTGTTTTTGC+AGG | - | chr3_4:44061655-44061674 | None:intergenic | 40.0% |
| TTCATTCTGATCAACTGCCT+TGG | - | chr3_4:44061677-44061696 | None:intergenic | 40.0% | |
| GCAGTTGATCAGAATGAAGA+AGG | + | chr3_4:44061679-44061698 | Msa0502090:CDS | 40.0% | |
| AAAGGTGAAGATCAAACCAG+TGG | + | chr3_4:44061703-44061722 | Msa0502090:CDS | 40.0% | |
| CAATCTGACAACAGAAAGTG+TGG | + | chr3_4:44061765-44061784 | Msa0502090:intron | 40.0% | |
| GAAGTTGAAGCACAAAGAGA+TGG | + | chr3_4:44061902-44061921 | Msa0502090:CDS | 40.0% | |
| AAATAGCCCTCAAGTGTGAA+AGG | - | chr3_4:44062919-44062938 | None:intergenic | 40.0% | |
| GCTAAGAAGTTAATGCTAGG+TGG | - | chr3_4:44062985-44063004 | None:intergenic | 40.0% | |
| GGAGCTAAGAAGTTAATGCT+AGG | - | chr3_4:44062988-44063007 | None:intergenic | 40.0% | |
| GAGAGGATGACTGTAATGTT+AGG | - | chr3_4:44063041-44063060 | None:intergenic | 40.0% | |
| ! | AGCTAGCTAAGTTTTCACGA+GGG | - | chr3_4:44063466-44063485 | None:intergenic | 40.0% |
| ! | AAGCTAGCTAAGTTTTCACG+AGG | - | chr3_4:44063467-44063486 | None:intergenic | 40.0% |
| ! | GGGGCTTTTAAGCAAAACTT+AGG | + | chr3_4:44063539-44063558 | Msa0502090:intron | 40.0% |
| AGCCATATATCCCACTAAGT+GGG | - | chr3_4:44063601-44063620 | None:intergenic | 40.0% | |
| AAGCCATATATCCCACTAAG+TGG | - | chr3_4:44063602-44063621 | None:intergenic | 40.0% | |
| ACTTAGTGGGATATATGGCT+TGG | + | chr3_4:44063601-44063620 | Msa0502090:intron | 40.0% | |
| TTCATAAGTGTCTGTCACCT+TGG | + | chr3_4:44063762-44063781 | Msa0502090:intron | 40.0% | |
| TGTCACCTTGGATTACTTTC+TGG | + | chr3_4:44063774-44063793 | Msa0502090:intron | 40.0% | |
| AGATTGCTGACATGATCTCA+AGG | - | chr3_4:44063815-44063834 | None:intergenic | 40.0% | |
| CTTTCTGCCAGCAAAATCAA+GGG | - | chr3_4:44063891-44063910 | None:intergenic | 40.0% | |
| ! | GATTAACATCTGCTGCTTAC+AGG | + | chr3_4:44064318-44064337 | Msa0502090:intron | 40.0% |
| AAGATGGCATTATGCCTGTT+TGG | - | chr3_4:44064397-44064416 | None:intergenic | 40.0% | |
| ACACATCGTGTTCAGATTGA+TGG | - | chr3_4:44064832-44064851 | None:intergenic | 40.0% | |
| CTTTGGTTATATTTGCAGGC+AGG | + | chr3_4:44064869-44064888 | Msa0502090:intron | 40.0% | |
| ACATACCCCACATTAAGTTC+AGG | + | chr3_4:44065223-44065242 | Msa0502090:three_prime_UTR | 40.0% | |
| AGAGCTCCTGAACTTAATGT+GGG | - | chr3_4:44065232-44065251 | None:intergenic | 40.0% | |
| GATTGGAGAGGGAAAGGAAA+GGG | - | chr3_4:44060623-44060642 | None:intergenic | 45.0% | |
| AATTGGGATTGGAGAGGGAA+AGG | - | chr3_4:44060629-44060648 | None:intergenic | 45.0% | |
| GTTGGAATTGGGATTGGAGA+GGG | - | chr3_4:44060634-44060653 | None:intergenic | 45.0% | |
| CTTCAGCCATGTCCGTTTAT+AGG | + | chr3_4:44060683-44060702 | Msa0502090:exon | 45.0% | |
| ! | AAAGTGGTGGAAAGAGGTTG+TGG | - | chr3_4:44060760-44060779 | None:intergenic | 45.0% |
| ! | TTTTTACGTACTCACCGGCA+AGG | - | chr3_4:44061181-44061200 | None:intergenic | 45.0% |
| CACACATAAGTGGGTGATTC+CGG | + | chr3_4:44061277-44061296 | Msa0502090:intron | 45.0% | |
| ACACATAAGTGGGTGATTCC+GGG | + | chr3_4:44061278-44061297 | Msa0502090:intron | 45.0% | |
| TGGCAAACACCGAAATTCCT+AGG | - | chr3_4:44061317-44061336 | None:intergenic | 45.0% | |
| GGGTCATCACTTGAAGATTC+AGG | - | chr3_4:44061634-44061653 | None:intergenic | 45.0% | |
| GAAGATCAAACCAGTGGATC+AGG | + | chr3_4:44061709-44061728 | Msa0502090:CDS | 45.0% | |
| TCAAACCAGTGGATCAGGTT+AGG | + | chr3_4:44061714-44061733 | Msa0502090:intron | 45.0% | |
| CAAACCAGTGGATCAGGTTA+GGG | + | chr3_4:44061715-44061734 | Msa0502090:intron | 45.0% | |
| AGATGGAGAATGTCATGGAC+AGG | + | chr3_4:44061961-44061980 | Msa0502090:CDS | 45.0% | |
| GCGGCTTGATCAGATTCTTT+AGG | - | chr3_4:44062209-44062228 | None:intergenic | 45.0% | |
| !! | AAGTGTTTTCAGGAGTGGTG+CGG | - | chr3_4:44062228-44062247 | None:intergenic | 45.0% |
| ACCACTCCTGAAAACACTTC+TGG | + | chr3_4:44062229-44062248 | Msa0502090:CDS | 45.0% | |
| !!! | TCCAGAAGTGTTTTCAGGAG+TGG | - | chr3_4:44062233-44062252 | None:intergenic | 45.0% |
| CTCCTGAAAACACTTCTGGA+AGG | + | chr3_4:44062233-44062252 | Msa0502090:CDS | 45.0% | |
| !!! | CACCTTCCAGAAGTGTTTTC+AGG | - | chr3_4:44062238-44062257 | None:intergenic | 45.0% |
| GACTGAGAAACAACTTGCAG+AGG | + | chr3_4:44062265-44062284 | Msa0502090:CDS | 45.0% | |
| TGAAAGGACGGTGCTCATTT+GGG | - | chr3_4:44062903-44062922 | None:intergenic | 45.0% | |
| ATGAGGACAAGGTTGTTGAG+AGG | - | chr3_4:44063058-44063077 | None:intergenic | 45.0% | |
| TCTCAACAACCTTGTCCTCA+TGG | + | chr3_4:44063057-44063076 | Msa0502090:intron | 45.0% | |
| GATCAGGAGATAGAATCCGA+TGG | + | chr3_4:44063098-44063117 | Msa0502090:intron | 45.0% | |
| TATCGGGAGATACGGTTCAT+TGG | - | chr3_4:44063132-44063151 | None:intergenic | 45.0% | |
| AATGAACCGTATCTCCCGAT+AGG | + | chr3_4:44063131-44063150 | Msa0502090:intron | 45.0% | |
| ! | GCGAAGCTATTTGTTGGCAA+GGG | + | chr3_4:44063159-44063178 | Msa0502090:intron | 45.0% |
| ! | CGAAGCTATTTGTTGGCAAG+GGG | + | chr3_4:44063160-44063179 | Msa0502090:intron | 45.0% |
| ! | CTAGCTAAGTTTTCACGAGG+GGG | - | chr3_4:44063464-44063483 | None:intergenic | 45.0% |
| ! | GCTAGCTAAGTTTTCACGAG+GGG | - | chr3_4:44063465-44063484 | None:intergenic | 45.0% |
| TCCGCTCGCAAAAAACCTAT+CGG | - | chr3_4:44063498-44063517 | None:intergenic | 45.0% | |
| ACCCCACTTAGTGGGATATA+TGG | + | chr3_4:44063596-44063615 | Msa0502090:intron | 45.0% | |
| GCCATATATCCCACTAAGTG+GGG | - | chr3_4:44063600-44063619 | None:intergenic | 45.0% | |
| ! | TAGTGGGATATATGGCTTGG+TGG | + | chr3_4:44063604-44063623 | Msa0502090:intron | 45.0% |
| GCTGACATGATCTCAAGGTT+TGG | - | chr3_4:44063810-44063829 | None:intergenic | 45.0% | |
| GCTTTCTGCCAGCAAAATCA+AGG | - | chr3_4:44063892-44063911 | None:intergenic | 45.0% | |
| CCAGTCTACTCTCCTAAACA+TGG | - | chr3_4:44064226-44064245 | None:intergenic | 45.0% | |
| CCATGTTTAGGAGAGTAGAC+TGG | + | chr3_4:44064223-44064242 | Msa0502090:intron | 45.0% | |
| ! | AGCATCGGGTATTTGGAAGA+TGG | - | chr3_4:44064413-44064432 | None:intergenic | 45.0% |
| CACTGTTGGAGTTGTTCTCA+AGG | + | chr3_4:44064447-44064466 | Msa0502090:CDS | 45.0% | |
| ! | TGCTTTTAGTCCCTCTTTGC+AGG | + | chr3_4:44064629-44064648 | Msa0502090:intron | 45.0% |
| TACTTCGTCCAGCAGAAGTT+GGG | + | chr3_4:44064912-44064931 | Msa0502090:CDS | 45.0% | |
| AGTTGGGGTTACACATGAAG+TGG | + | chr3_4:44064928-44064947 | Msa0502090:CDS | 45.0% | |
| GAGCTCCTGAACTTAATGTG+GGG | - | chr3_4:44065231-44065250 | None:intergenic | 45.0% | |
| GAGAGCTCCTGAACTTAATG+TGG | - | chr3_4:44065233-44065252 | None:intergenic | 45.0% | |
| !!! | ATAAATTTAAACATTTTTTT+TGG | - | chr3_4:44061416-44061435 | None:intergenic | 5.0% |
| !!! | AATTTATATTTTTTGTTTTT+AGG | - | chr3_4:44064671-44064690 | None:intergenic | 5.0% |
| GGATTGGAGAGGGAAAGGAA+AGG | - | chr3_4:44060624-44060643 | None:intergenic | 50.0% | |
| GGTTGGAATTGGGATTGGAG+AGG | - | chr3_4:44060635-44060654 | None:intergenic | 50.0% | |
| ! | AGAGAGAAGCGTGAAGGTTC+TGG | - | chr3_4:44060725-44060744 | None:intergenic | 50.0% |
| TGGTGTAGTTCGATCCTTGC+CGG | + | chr3_4:44061164-44061183 | Msa0502090:intron | 50.0% | |
| GGCGTCCAACCTAGGAATTT+CGG | + | chr3_4:44061305-44061324 | Msa0502090:intron | 50.0% | |
| TAGACCCTAACCTGATCCAC+TGG | - | chr3_4:44061722-44061741 | None:intergenic | 50.0% | |
| TCTGCGTACTTATGCGGAGA+TGG | + | chr3_4:44061944-44061963 | Msa0502090:CDS | 50.0% | |
| TGCGGAGATGGAGAATGTCA+TGG | + | chr3_4:44061956-44061975 | Msa0502090:CDS | 50.0% | |
| GGACAGGACTAATCGCAATG+CGG | + | chr3_4:44061977-44061996 | Msa0502090:CDS | 50.0% | |
| GAAAGGACGGTGCTCATTTG+GGG | - | chr3_4:44062902-44062921 | None:intergenic | 50.0% | |
| GTGAAAGGACGGTGCTCATT+TGG | - | chr3_4:44062904-44062923 | None:intergenic | 50.0% | |
| CACCGTCCTTTCACACTTGA+GGG | + | chr3_4:44062910-44062929 | Msa0502090:intron | 50.0% | |
| AGCCCTCAAGTGTGAAAGGA+CGG | - | chr3_4:44062915-44062934 | None:intergenic | 50.0% | |
| ! | GGCGAAGCTATTTGTTGGCA+AGG | + | chr3_4:44063158-44063177 | Msa0502090:intron | 50.0% |
| ! | AGCTATTTGTTGGCAAGGGG+TGG | + | chr3_4:44063163-44063182 | Msa0502090:intron | 50.0% |
| CGCAAAAAACCTATCGGCAG+CGG | - | chr3_4:44063492-44063511 | None:intergenic | 50.0% | |
| !!! | GCCGATAGGTTTTTTGCGAG+CGG | + | chr3_4:44063494-44063513 | Msa0502090:intron | 50.0% |
| CTGCTGAAACCCCACTTAGT+GGG | + | chr3_4:44063588-44063607 | Msa0502090:intron | 50.0% | |
| TTTAATGCAAGGGGGTCGCA+TGG | - | chr3_4:44063709-44063728 | None:intergenic | 50.0% | |
| CAGCAAAATCAAGGGCAAGC+TGG | - | chr3_4:44063883-44063902 | None:intergenic | 50.0% | |
| ! | CAGCTTGCCCTTGATTTTGC+TGG | + | chr3_4:44063881-44063900 | Msa0502090:intron | 50.0% |
| !! | AACATGATGGGTGGCAGCAT+TGG | - | chr3_4:44063916-44063935 | None:intergenic | 50.0% |
| !! | GCTTGGAAGCATCGGGTATT+TGG | - | chr3_4:44064420-44064439 | None:intergenic | 50.0% |
| AGAACAACTCCAACAGTGCC+TGG | - | chr3_4:44064445-44064464 | None:intergenic | 50.0% | |
| GTACTTCGTCCAGCAGAAGT+TGG | + | chr3_4:44064911-44064930 | Msa0502090:CDS | 50.0% | |
| ACTTCGTCCAGCAGAAGTTG+GGG | + | chr3_4:44064913-44064932 | Msa0502090:CDS | 50.0% | |
| TGTGTAACCCCAACTTCTGC+TGG | - | chr3_4:44064923-44064942 | None:intergenic | 50.0% | |
| TGGGGTTACACATGAAGTGG+AGG | + | chr3_4:44064931-44064950 | Msa0502090:CDS | 50.0% | |
| ! | CGAAGCAGAGAGAAGCGTGA+AGG | - | chr3_4:44060731-44060750 | None:intergenic | 55.0% |
| AAGTGGGTGATTCCGGGTCA+CGG | + | chr3_4:44061284-44061303 | Msa0502090:intron | 55.0% | |
| TGAAGATTCAGGTGAGGCCG+AGG | - | chr3_4:44061623-44061642 | None:intergenic | 55.0% | |
| GCACCGTCCTTTCACACTTG+AGG | + | chr3_4:44062909-44062928 | Msa0502090:intron | 55.0% | |
| AACCGTATCTCCCGATAGGC+AGG | + | chr3_4:44063135-44063154 | Msa0502090:intron | 55.0% | |
| ACCGTATCTCCCGATAGGCA+GGG | + | chr3_4:44063136-44063155 | Msa0502090:intron | 55.0% | |
| ATAGCTTCGCCCCTGCCTAT+CGG | - | chr3_4:44063149-44063168 | None:intergenic | 55.0% | |
| GCAGGGGCGAAGCTATTTGT+TGG | + | chr3_4:44063153-44063172 | Msa0502090:intron | 55.0% | |
| TTGTTGGCAAGGGGTGGCTT+TGG | + | chr3_4:44063169-44063188 | Msa0502090:intron | 55.0% | |
| CTAAGTGGGGTTTCAGCAGC+AGG | - | chr3_4:44063587-44063606 | None:intergenic | 55.0% | |
| GCTGCTGAAACCCCACTTAG+TGG | + | chr3_4:44063587-44063606 | Msa0502090:intron | 55.0% | |
| ACAACTCCAACAGTGCCTGG+AGG | - | chr3_4:44064442-44064461 | None:intergenic | 55.0% | |
| ! | GTGAGTGGTAGCGAGAGTGT+TGG | - | chr3_4:44065370-44065389 | None:intergenic | 55.0% |
| CCCCTGCCTATCGGGAGATA+CGG | - | chr3_4:44063140-44063159 | None:intergenic | 60.0% | |
| CCGTATCTCCCGATAGGCAG+GGG | + | chr3_4:44063137-44063156 | Msa0502090:intron | 60.0% | |
| TAGCTTCGCCCCTGCCTATC+GGG | - | chr3_4:44063148-44063167 | None:intergenic | 60.0% | |
| !! | CCTGGAGGCTTGGAAGCATC+GGG | - | chr3_4:44064427-44064446 | None:intergenic | 60.0% |
| ! | GCCTGGAGGCTTGGAAGCAT+CGG | - | chr3_4:44064428-44064447 | None:intergenic | 60.0% |
| ! | TCCAAGCCTCCAGGCACTGT+TGG | + | chr3_4:44064433-44064452 | Msa0502090:CDS | 60.0% |
| TCCAACAGTGCCTGGAGGCT+TGG | - | chr3_4:44064437-44064456 | None:intergenic | 60.0% | |
| ! | CTAGGTTGGACGCCGTGACC+CGG | - | chr3_4:44061299-44061318 | None:intergenic | 65.0% |
| CTAGCTTCGCCGCTGCCGAT+AGG | + | chr3_4:44063480-44063499 | Msa0502090:intron | 65.0% | |
| CCCGATGCTTCCAAGCCTCC+AGG | + | chr3_4:44064424-44064443 | Msa0502090:CDS | 65.0% | |
| CGGGTCACGGCGTCCAACCT+AGG | + | chr3_4:44061297-44061316 | Msa0502090:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_4 | gene | 44060511 | 44065441 | 44060511 | ID=Msa0502090;Name=Msa0502090 |
| chr3_4 | mRNA | 44060511 | 44065441 | 44060511 | ID=Msa0502090-mRNA-1;Parent=Msa0502090;Name=Msa0502090-mRNA-1;_AED=0.28;_eAED=0.28;_QI=180|1|1|1|1|1|6|465|300 |
| chr3_4 | exon | 44060511 | 44060822 | 44060511 | ID=Msa0502090-mRNA-1:exon:9352;Parent=Msa0502090-mRNA-1 |
| chr3_4 | exon | 44061547 | 44061730 | 44061547 | ID=Msa0502090-mRNA-1:exon:9353;Parent=Msa0502090-mRNA-1 |
| chr3_4 | exon | 44061826 | 44062025 | 44061826 | ID=Msa0502090-mRNA-1:exon:9354;Parent=Msa0502090-mRNA-1 |
| chr3_4 | exon | 44062119 | 44062286 | 44062119 | ID=Msa0502090-mRNA-1:exon:9355;Parent=Msa0502090-mRNA-1 |
| chr3_4 | exon | 44064340 | 44064468 | 44064340 | ID=Msa0502090-mRNA-1:exon:9356;Parent=Msa0502090-mRNA-1 |
| chr3_4 | exon | 44064887 | 44065441 | 44064887 | ID=Msa0502090-mRNA-1:exon:9357;Parent=Msa0502090-mRNA-1 |
| chr3_4 | five_prime_UTR | 44060511 | 44060690 | 44060511 | ID=Msa0502090-mRNA-1:five_prime_utr;Parent=Msa0502090-mRNA-1 |
| chr3_4 | CDS | 44060691 | 44060822 | 44060691 | ID=Msa0502090-mRNA-1:cds;Parent=Msa0502090-mRNA-1 |
| chr3_4 | CDS | 44061547 | 44061730 | 44061547 | ID=Msa0502090-mRNA-1:cds;Parent=Msa0502090-mRNA-1 |
| chr3_4 | CDS | 44061826 | 44062025 | 44061826 | ID=Msa0502090-mRNA-1:cds;Parent=Msa0502090-mRNA-1 |
| chr3_4 | CDS | 44062119 | 44062286 | 44062119 | ID=Msa0502090-mRNA-1:cds;Parent=Msa0502090-mRNA-1 |
| chr3_4 | CDS | 44064340 | 44064468 | 44064340 | ID=Msa0502090-mRNA-1:cds;Parent=Msa0502090-mRNA-1 |
| chr3_4 | CDS | 44064887 | 44064976 | 44064887 | ID=Msa0502090-mRNA-1:cds;Parent=Msa0502090-mRNA-1 |
| chr3_4 | three_prime_UTR | 44064977 | 44065441 | 44064977 | ID=Msa0502090-mRNA-1:three_prime_utr;Parent=Msa0502090-mRNA-1 |
| Gene Sequence |
| Protein sequence |
