Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0523110 | PNX96892.1 | 99.777 | 449 | 1 | 0 | 1 | 449 | 1 | 449 | 0.0 | 943 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0523110 | sp|Q39445|TBB_CICAR | 98.664 | 449 | 6 | 0 | 1 | 449 | 1 | 449 | 0.0 | 934 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0523110 | A0A2K3N1J7 | 99.777 | 449 | 1 | 0 | 1 | 449 | 1 | 449 | 0.0 | 943 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0013970 | Msa0523110 | 0.813773 | 2.160546e-51 | -8.615850e-47 |
| Msa0040790 | Msa0523110 | 0.814819 | 1.268478e-51 | -8.615850e-47 |
| Msa0057900 | Msa0523110 | 0.808998 | 2.350734e-50 | -8.615850e-47 |
| Msa0079280 | Msa0523110 | 0.800420 | 1.453320e-48 | -8.615850e-47 |
| Msa0124910 | Msa0523110 | 0.818192 | 2.228336e-52 | -8.615850e-47 |
| Msa0143590 | Msa0523110 | 0.813682 | 2.261740e-51 | -8.615850e-47 |
| Msa0184500 | Msa0523110 | 0.811453 | 6.950090e-51 | -8.615850e-47 |
| Msa0197140 | Msa0523110 | 0.805216 | 1.485661e-49 | -8.615850e-47 |
| Msa0209140 | Msa0523110 | 0.833777 | 4.388850e-56 | -8.615850e-47 |
| Msa0224110 | Msa0523110 | 0.809042 | 2.300202e-50 | -8.615850e-47 |
| Msa0385310 | Msa0523110 | 0.993555 | 1.478884e-200 | -8.615850e-47 |
| Msa0386880 | Msa0523110 | 0.819772 | 9.745691e-53 | -8.615850e-47 |
| Msa0387930 | Msa0523110 | 0.816265 | 6.045274e-52 | -8.615850e-47 |
| Msa0430230 | Msa0523110 | 0.849251 | 3.646643e-60 | -8.615850e-47 |
| Msa0479420 | Msa0523110 | 0.965870 | 3.612789e-125 | -8.615850e-47 |
| Msa0249850 | Msa0523110 | 0.812191 | 4.799928e-51 | -8.615850e-47 |
| Msa0276850 | Msa0523110 | 0.803154 | 3.990642e-49 | -8.615850e-47 |
| Msa0276860 | Msa0523110 | 0.822249 | 2.620570e-53 | -8.615850e-47 |
| Msa0288620 | Msa0523110 | 0.802095 | 6.601661e-49 | -8.615850e-47 |
| Msa0309720 | Msa0523110 | 0.815934 | 7.166960e-52 | -8.615850e-47 |
| Msa0326710 | Msa0523110 | 0.856152 | 3.903174e-62 | -8.615850e-47 |
| Msa0490430 | Msa0523110 | 0.809620 | 1.728907e-50 | -8.615850e-47 |
| Msa0518590 | Msa0523110 | 0.806802 | 6.892429e-50 | -8.615850e-47 |
| Msa0519150 | Msa0523110 | 0.804224 | 2.394000e-49 | -8.615850e-47 |
| Msa0523110 | Msa0525880 | 0.830418 | 2.970140e-55 | -8.615850e-47 |
| Msa0523110 | Msa0563090 | 0.811874 | 5.628751e-51 | -8.615850e-47 |
| Msa0523110 | Msa0574900 | 0.810789 | 9.677901e-51 | -8.615850e-47 |
| Msa0523110 | Msa0617940 | 0.871161 | 8.435281e-67 | -8.615850e-47 |
| Msa0523110 | Msa0692790 | 0.866816 | 2.161575e-65 | -8.615850e-47 |
| Msa0523110 | Msa0703950 | 0.808235 | 3.421929e-50 | -8.615850e-47 |
| Msa0523110 | Msa0930770 | 0.806091 | 9.731427e-50 | -8.615850e-47 |
| Msa0523110 | Msa1013190 | 0.807620 | 4.623407e-50 | -8.615850e-47 |
| Msa0523110 | Msa1024570 | 0.814157 | 1.777342e-51 | -8.615850e-47 |
| Msa0523110 | Msa1031180 | 0.800761 | 1.238364e-48 | -8.615850e-47 |
| Msa0523110 | Msa1031390 | 0.805171 | 1.518490e-49 | -8.615850e-47 |
| Msa0523110 | Msa1045280 | 0.810128 | 1.344482e-50 | -8.615850e-47 |
| Msa0523110 | Msa1070890 | 0.855102 | 7.901614e-62 | -8.615850e-47 |
| Msa0523110 | Msa1078830 | 0.816078 | 6.657033e-52 | -8.615850e-47 |
| Msa0523110 | Msa1078890 | 0.838423 | 2.901416e-57 | -8.615850e-47 |
| Msa0523110 | Msa1088320 | 0.814383 | 1.584245e-51 | -8.615850e-47 |
| Msa0523110 | Msa1101120 | 0.812939 | 3.293461e-51 | -8.615850e-47 |
| Msa0523110 | Msa1119430 | 0.809602 | 1.745141e-50 | -8.615850e-47 |
| Msa0523110 | Msa1147700 | 0.825449 | 4.658584e-54 | -8.615850e-47 |
| Msa0523110 | Msa1165090 | 0.822638 | 2.128049e-53 | -8.615850e-47 |
| Msa0523110 | Msa1166100 | 0.811971 | 5.361527e-51 | -8.615850e-47 |
| Msa0523110 | Msa1169220 | 0.805356 | 1.388789e-49 | -8.615850e-47 |
| Msa0523110 | Msa1169660 | 0.809026 | 2.318845e-50 | -8.615850e-47 |
| Msa0523110 | Msa1323070 | 0.800782 | 1.226462e-48 | -8.615850e-47 |
| Msa0523110 | Msa1326180 | 0.814079 | 1.849292e-51 | -8.615850e-47 |
| Msa0523110 | Msa1331300 | 0.804530 | 2.067066e-49 | -8.615850e-47 |
| Msa0523110 | Msa1365820 | 0.829471 | 5.054007e-55 | -8.615850e-47 |
| Msa0523110 | Msa1368390 | 0.814231 | 1.711445e-51 | -8.615850e-47 |
| Msa0523110 | Msa1373170 | 0.828197 | 1.027481e-54 | -8.615850e-47 |
| Msa0523110 | Msa1383820 | 0.990040 | 8.737000e-181 | -8.615850e-47 |
| Msa0523110 | Msa1396410 | 0.807798 | 4.238718e-50 | -8.615850e-47 |
| Msa0523110 | Msa1404680 | 0.840515 | 8.301297e-58 | -8.615850e-47 |
| Msa0523110 | Msa1455400 | 0.824540 | 7.637439e-54 | -8.615850e-47 |
| Msa0523110 | Msa1457770 | 0.826079 | 3.302502e-54 | -8.615850e-47 |
| Msa0523110 | Msa1464880 | 0.807559 | 4.765011e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0523110 | MtrunA17_Chr3g0142731 | 99.333 | 450 | 2 | 1 | 1 | 449 | 1 | 450 | 0.0 | 936 |
| Msa0523110 | MtrunA17_Chr2g0292921 | 94.907 | 432 | 20 | 1 | 1 | 432 | 1 | 430 | 0.0 | 839 |
| Msa0523110 | MtrunA17_Chr7g0255791 | 93.750 | 432 | 25 | 1 | 1 | 432 | 1 | 430 | 0.0 | 833 |
| Msa0523110 | MtrunA17_Chr4g0051631 | 93.981 | 432 | 24 | 1 | 1 | 432 | 1 | 430 | 0.0 | 832 |
| Msa0523110 | MtrunA17_Chr1g0203181 | 93.287 | 432 | 27 | 1 | 1 | 432 | 1 | 430 | 0.0 | 831 |
| Msa0523110 | MtrunA17_Chr4g0008401 | 92.593 | 432 | 30 | 1 | 1 | 432 | 1 | 430 | 0.0 | 827 |
| Msa0523110 | MtrunA17_Chr4g0008361 | 92.361 | 432 | 31 | 1 | 1 | 432 | 1 | 430 | 0.0 | 824 |
| Msa0523110 | MtrunA17_Chr8g0386781 | 92.558 | 430 | 30 | 1 | 1 | 430 | 1 | 428 | 0.0 | 820 |
| Msa0523110 | MtrunA17_Chr4g0007371 | 92.627 | 434 | 28 | 2 | 1 | 432 | 1 | 432 | 0.0 | 820 |
| Msa0523110 | MtrunA17_Chr8g0393021 | 89.640 | 444 | 40 | 3 | 1 | 441 | 1 | 441 | 0.0 | 817 |
| Msa0523110 | MtrunA17_Chr8g0378821 | 40.553 | 434 | 250 | 1 | 1 | 426 | 1 | 434 | 1.01e-124 | 369 |
| Msa0523110 | MtrunA17_Chr1g0206881 | 40.611 | 458 | 244 | 4 | 1 | 447 | 1 | 441 | 7.79e-123 | 365 |
| Msa0523110 | MtrunA17_Chr3g0140821 | 40.220 | 455 | 244 | 4 | 1 | 444 | 1 | 438 | 1.23e-122 | 364 |
| Msa0523110 | MtrunA17_Chr4g0054511 | 40.220 | 455 | 244 | 4 | 1 | 444 | 1 | 438 | 2.83e-122 | 363 |
| Msa0523110 | MtrunA17_Chr7g0253411 | 39.159 | 452 | 253 | 2 | 1 | 444 | 1 | 438 | 3.63e-122 | 363 |
| Msa0523110 | MtrunA17_Chr6g0461281 | 39.955 | 448 | 259 | 3 | 1 | 438 | 1 | 448 | 4.57e-122 | 363 |
| Msa0523110 | MtrunA17_Chr2g0300671 | 36.830 | 448 | 267 | 4 | 1 | 440 | 1 | 440 | 1.38e-100 | 307 |
| Msa0523110 | MtrunA17_Chr2g0300491 | 36.504 | 452 | 270 | 4 | 1 | 440 | 1 | 447 | 1.28e-99 | 306 |
| Msa0523110 | MtrunA17_Chr7g0275431 | 35.498 | 462 | 267 | 10 | 2 | 444 | 3 | 452 | 1.17e-96 | 298 |
| Msa0523110 | MtrunA17_Chr3g0109241 | 30.370 | 135 | 86 | 1 | 271 | 397 | 4 | 138 | 1.73e-20 | 87.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0523110 | AT1G75780.1 | 94.676 | 432 | 22 | 1 | 1 | 432 | 1 | 431 | 0.0 | 840 |
| Msa0523110 | AT1G20010.1 | 94.213 | 432 | 24 | 1 | 1 | 432 | 1 | 431 | 0.0 | 836 |
| Msa0523110 | AT5G12250.1 | 93.287 | 432 | 27 | 1 | 1 | 432 | 1 | 430 | 0.0 | 832 |
| Msa0523110 | AT5G23860.2 | 93.519 | 432 | 26 | 1 | 1 | 432 | 1 | 430 | 0.0 | 831 |
| Msa0523110 | AT5G23860.1 | 93.519 | 432 | 26 | 1 | 1 | 432 | 1 | 430 | 0.0 | 831 |
| Msa0523110 | AT5G62690.1 | 93.287 | 432 | 27 | 1 | 1 | 432 | 1 | 430 | 0.0 | 828 |
| Msa0523110 | AT5G62700.1 | 93.287 | 432 | 27 | 1 | 1 | 432 | 1 | 430 | 0.0 | 828 |
| Msa0523110 | AT2G29550.1 | 93.072 | 433 | 28 | 1 | 1 | 433 | 1 | 431 | 0.0 | 825 |
| Msa0523110 | AT5G44340.1 | 92.361 | 432 | 31 | 1 | 1 | 432 | 1 | 430 | 0.0 | 820 |
| Msa0523110 | AT4G20890.1 | 93.023 | 430 | 28 | 1 | 1 | 430 | 1 | 428 | 0.0 | 819 |
| Msa0523110 | AT1G64740.1 | 40.092 | 434 | 252 | 1 | 1 | 426 | 1 | 434 | 2.52e-124 | 369 |
| Msa0523110 | AT5G19780.1 | 40.323 | 434 | 251 | 1 | 1 | 426 | 1 | 434 | 4.99e-124 | 368 |
| Msa0523110 | AT5G19770.1 | 40.323 | 434 | 251 | 1 | 1 | 426 | 1 | 434 | 4.99e-124 | 368 |
| Msa0523110 | AT1G50010.1 | 40.732 | 437 | 245 | 3 | 1 | 426 | 1 | 434 | 3.55e-122 | 363 |
| Msa0523110 | AT1G04820.1 | 40.732 | 437 | 245 | 3 | 1 | 426 | 1 | 434 | 3.55e-122 | 363 |
| Msa0523110 | AT4G14960.2 | 40.503 | 437 | 246 | 3 | 1 | 426 | 1 | 434 | 2.67e-121 | 361 |
| Msa0523110 | AT4G14960.1 | 40.360 | 389 | 218 | 3 | 1 | 378 | 1 | 386 | 6.81e-102 | 311 |
| Msa0523110 | AT5G05620.1 | 35.065 | 462 | 269 | 10 | 2 | 444 | 3 | 452 | 1.17e-95 | 296 |
| Msa0523110 | AT3G61650.1 | 34.979 | 466 | 272 | 10 | 2 | 448 | 3 | 456 | 2.05e-95 | 295 |
Find 174 sgRNAs with CRISPR-Local
Find 278 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAAGATGAAGAATGAGATTT+AGG | 0.135702 | 3_4:-76456490 | None:intergenic |
| GGGACAGATAGATTTATTTA+TGG | 0.176111 | 3_4:-76456382 | None:intergenic |
| TCGCTTTGTCTTTGAGAAAA+TGG | 0.195099 | 3_4:+76459987 | Msa0523110:three_prime_UTR |
| CCCAGAATTTGGATCCAATT+TGG | 0.211203 | 3_4:-76456558 | None:intergenic |
| AATCTGGTGCTGGTAATAAT+TGG | 0.217101 | 3_4:+76456803 | Msa0523110:CDS |
| ACCAAATTGGATCCAAATTC+TGG | 0.227415 | 3_4:+76456557 | Msa0523110:CDS |
| GCATATCACCTCCCAGAATT+TGG | 0.235569 | 3_4:-76456569 | None:intergenic |
| TATTACACTTCAAATGAAAT+TGG | 0.243042 | 3_4:-76459832 | None:intergenic |
| GATTTAGGGTTTGGTGTGTT+TGG | 0.246640 | 3_4:-76456475 | None:intergenic |
| CTTGGAGGAGGCACGGGTTC+TGG | 0.250950 | 3_4:+76458680 | Msa0523110:CDS |
| ATTTAGGGTTTGGTGTGTTT+GGG | 0.257151 | 3_4:-76456474 | None:intergenic |
| CACATTTGTTGAGTCAGTTC+CGG | 0.265997 | 3_4:-76459218 | None:intergenic |
| CTTCAATTCAGGAGATGTTT+AGG | 0.278983 | 3_4:+76459474 | Msa0523110:CDS |
| GAATACATTCATAGCTTTAT+AGG | 0.282507 | 3_4:-76459926 | None:intergenic |
| TGGGAACTCAACTTCAATTC+AGG | 0.292593 | 3_4:+76459463 | Msa0523110:CDS |
| ACATGTTGTCTGAGGTTTCC+TGG | 0.293676 | 3_4:+76459068 | Msa0523110:CDS |
| TGTATAGTAATAAAACCATT+AGG | 0.296035 | 3_4:-76459729 | None:intergenic |
| CGTCCTGATAATTTCGTGTT+TGG | 0.301654 | 3_4:+76456778 | Msa0523110:CDS |
| TGTTCCTAGAGCAGTTCTTA+TGG | 0.307963 | 3_4:+76456699 | Msa0523110:CDS |
| GGCCAATGCGGTAACCAAAT+TGG | 0.311892 | 3_4:+76456544 | Msa0523110:CDS |
| GGACGACATCTTCAAATTCT+TGG | 0.312961 | 3_4:-76459432 | None:intergenic |
| ACATTTGTTGAGTCAGTTCC+GGG | 0.324818 | 3_4:-76459217 | None:intergenic |
| AGTATCAGATCTGGTCCTTT+TGG | 0.326490 | 3_4:+76456745 | Msa0523110:CDS |
| GAAGAATGAGATTTAGGGTT+TGG | 0.343322 | 3_4:-76456484 | None:intergenic |
| AGCAGCACACATCATATTCT+TGG | 0.353564 | 3_4:-76459246 | None:intergenic |
| AAGATGAAGAATGAGATTTA+GGG | 0.355346 | 3_4:-76456489 | None:intergenic |
| GATTTGTTCATCAACCTCTT+TGG | 0.362636 | 3_4:-76459327 | None:intergenic |
| CTATTGCATCCTGGTATTGT+TGG | 0.375777 | 3_4:-76459625 | None:intergenic |
| ATTCTTCATACTTTGTTGAA+TGG | 0.376461 | 3_4:+76459369 | Msa0523110:CDS |
| CTCTATTGATATCAAAGATT+AGG | 0.378228 | 3_4:+76458711 | Msa0523110:CDS |
| CCCAGTATACCAATGCAAAA+AGG | 0.378377 | 3_4:-76459537 | None:intergenic |
| GTTTCATTTCATTTGTTTCA+AGG | 0.382153 | 3_4:-76456274 | None:intergenic |
| CACTTTATGACATTTGCTTC+AGG | 0.383936 | 3_4:+76458882 | Msa0523110:CDS |
| ACACTAGACTTCACATTGTT+GGG | 0.386553 | 3_4:-76459395 | None:intergenic |
| CACACTAGACTTCACATTGT+TGG | 0.390184 | 3_4:-76459396 | None:intergenic |
| CTATCGGGGTAATGCCCTAA+TGG | 0.391267 | 3_4:+76459714 | Msa0523110:three_prime_UTR |
| TGTCCAAACACGAAATTATC+AGG | 0.392526 | 3_4:-76456781 | None:intergenic |
| TCTATTGATATCAAAGATTA+GGG | 0.396270 | 3_4:+76458712 | Msa0523110:CDS |
| CTCATGCTTCATTTGAAAGC+TGG | 0.396801 | 3_4:+76460073 | Msa0523110:three_prime_UTR |
| CAAGTTTGCCACTCCCTTGG+AGG | 0.398051 | 3_4:+76458665 | Msa0523110:CDS |
| AAGAATAAAAGAAAAGCTTA+TGG | 0.400250 | 3_4:-76459783 | None:intergenic |
| AGAGAGTAACATGAATGATT+TGG | 0.405537 | 3_4:+76459592 | Msa0523110:CDS |
| CACTCCCTTGGAGGAGGCAC+GGG | 0.410186 | 3_4:+76458674 | Msa0523110:CDS |
| TTTCAAGTTTGCCACTCCCT+TGG | 0.411514 | 3_4:+76458662 | Msa0523110:CDS |
| AGCAGTTTACTGCAATGTTC+CGG | 0.413290 | 3_4:+76459507 | Msa0523110:CDS |
| ATGGAAAGAGAGGGAAATGC+GGG | 0.413953 | 3_4:-76456363 | None:intergenic |
| GGTAATAATGGAGGGGATGG+AGG | 0.414094 | 3_4:-76456331 | None:intergenic |
| ACAGATAGTGTAGCATTATA+TGG | 0.417861 | 3_4:-76458809 | None:intergenic |
| AATTTCGTGTTTGGACAATC+TGG | 0.419616 | 3_4:+76456787 | Msa0523110:CDS |
| GACGACATCTTCAAATTCTT+GGG | 0.419923 | 3_4:-76459431 | None:intergenic |
| AGTCAAGTATCGGCCATGTC+GGG | 0.423301 | 3_4:-76459273 | None:intergenic |
| TCTTGGAGTAAGGGACTTGA+TGG | 0.427904 | 3_4:-76460050 | None:intergenic |
| GTATAGTAATAAAACCATTA+GGG | 0.428564 | 3_4:-76459728 | None:intergenic |
| AGAGAGATCTTGCACGTTCA+AGG | 0.432109 | 3_4:+76456520 | Msa0523110:CDS |
| GTGTATTACAATGAAGCTTC+TGG | 0.433261 | 3_4:+76456667 | Msa0523110:CDS |
| ATCTGGTGCTGGTAATAATT+GGG | 0.444114 | 3_4:+76456804 | Msa0523110:CDS |
| ACAACTGTGTCAGATACCTT+TGG | 0.444799 | 3_4:-76458782 | None:intergenic |
| GGAGGCACGGGTTCTGGCAT+GGG | 0.445967 | 3_4:+76458686 | Msa0523110:CDS |
| AGATTTATTTATGGAAAGAG+AGG | 0.446051 | 3_4:-76456373 | None:intergenic |
| CTGAATGCGTCCTGTCAGAC+AGG | 0.447758 | 3_4:+76459881 | Msa0523110:three_prime_UTR |
| GTCAATCAACTCAGCACCTT+CGG | 0.448375 | 3_4:-76456842 | None:intergenic |
| ACCTTCGGTATAATGACCTT+TGG | 0.450279 | 3_4:-76456827 | None:intergenic |
| GAAGCATGAGTCTTGGAGTA+AGG | 0.450845 | 3_4:-76460060 | None:intergenic |
| GGTTAATATGGTAATAATGG+AGG | 0.455599 | 3_4:-76456340 | None:intergenic |
| GTCAATTGAACTCTGATCTC+AGG | 0.457782 | 3_4:+76459090 | Msa0523110:CDS |
| TTTCATTTCATTTGTTTCAA+GGG | 0.458775 | 3_4:-76456273 | None:intergenic |
| TTGGTATACTGGGGAGGGAA+TGG | 0.459874 | 3_4:+76459547 | Msa0523110:CDS |
| TTCAAATGAAGCATGAGTCT+TGG | 0.462295 | 3_4:-76460067 | None:intergenic |
| TTCTCAAAGACAAAGCGAAT+AGG | 0.466949 | 3_4:-76459982 | None:intergenic |
| TGAAATGAAATGAAATGAAA+TGG | 0.467125 | 3_4:-76456447 | None:intergenic |
| CCACTCCCTTGGAGGAGGCA+CGG | 0.467869 | 3_4:+76458673 | Msa0523110:CDS |
| ATCCAATTTGGTTACCGCAT+TGG | 0.468483 | 3_4:-76456546 | None:intergenic |
| CCTCCTCAGCTATTGCATCC+TGG | 0.470174 | 3_4:-76459634 | None:intergenic |
| AAAGTAAGCATCATTCTGTC+TGG | 0.471664 | 3_4:-76458743 | None:intergenic |
| CCAAATTGGATCCAAATTCT+GGG | 0.472580 | 3_4:+76456558 | Msa0523110:CDS |
| AGAAGGTGAGGAACATTATG+AGG | 0.473711 | 3_4:+76459673 | Msa0523110:CDS |
| GAGTCAGTTCCGGGACAGTA+AGG | 0.474292 | 3_4:-76459208 | None:intergenic |
| AGGTGGAAATGATACTCAAT+TGG | 0.476330 | 3_4:+76456633 | Msa0523110:CDS |
| AGGAGGCACGGGTTCTGGCA+TGG | 0.476981 | 3_4:+76458685 | Msa0523110:CDS |
| TACACTATCTGTCCACCAAC+TGG | 0.477941 | 3_4:+76458820 | Msa0523110:CDS |
| TGATTTCTGCAACTATGAGC+GGG | 0.478950 | 3_4:+76459042 | Msa0523110:CDS |
| ACATTATGAGGAGCAGTAGC+TGG | 0.483996 | 3_4:+76459685 | Msa0523110:exon |
| GAGAATTGTGATTGCTTGCA+AGG | 0.495773 | 3_4:+76456895 | Msa0523110:CDS |
| GTAATAATGGAGGGGATGGA+GGG | 0.496457 | 3_4:-76456330 | None:intergenic |
| TTTGCACCTCTCACTTCTCG+TGG | 0.496790 | 3_4:+76459167 | Msa0523110:CDS |
| TATGGTAATAATGGAGGGGA+TGG | 0.497034 | 3_4:-76456334 | None:intergenic |
| GAACACGGCATTGATCCAAC+TGG | 0.497409 | 3_4:+76456595 | Msa0523110:CDS |
| AGTTGAGTTCCCAATAAAAG+TGG | 0.497826 | 3_4:-76459453 | None:intergenic |
| ATCGAGTGTAAAGCAAAGAT+AGG | 0.499869 | 3_4:-76460026 | None:intergenic |
| GAAGATGATTATGAAGAAGA+AGG | 0.502318 | 3_4:+76459656 | Msa0523110:CDS |
| AAAAGTGAAGACGAGGGAAT+GGG | 0.507198 | 3_4:-76459133 | None:intergenic |
| AGTAGCTGGATCAAACTATC+GGG | 0.507378 | 3_4:+76459699 | Msa0523110:exon |
| GTGTCAGATACCTTTGGAGA+TGG | 0.509553 | 3_4:-76458776 | None:intergenic |
| CAGTAGCTGGATCAAACTAT+CGG | 0.516295 | 3_4:+76459698 | Msa0523110:exon |
| TTGCATTGGTATACTGGGGA+GGG | 0.517335 | 3_4:+76459542 | Msa0523110:CDS |
| CCGTGCCTCCTCCAAGGGAG+TGG | 0.517493 | 3_4:-76458673 | None:intergenic |
| GTTCTTATGGATCTTGAGCC+TGG | 0.519442 | 3_4:+76456712 | Msa0523110:CDS |
| GAAATAGTGTGCATGCCGTT+TGG | 0.520155 | 3_4:+76460111 | Msa0523110:three_prime_UTR |
| CTGATACTTTCCATGGTACC+AGG | 0.522407 | 3_4:-76456730 | None:intergenic |
| GTTAATATGGTAATAATGGA+GGG | 0.522460 | 3_4:-76456339 | None:intergenic |
| TGATTATCTTCTCAACCAAA+CGG | 0.525031 | 3_4:-76460126 | None:intergenic |
| ATAGAATAACCCTGTCTGAC+AGG | 0.525232 | 3_4:-76459891 | None:intergenic |
| GTGTTTGGACAATCTGGTGC+TGG | 0.529479 | 3_4:+76456793 | Msa0523110:CDS |
| TGGGGAGGGAATGGATGAGA+TGG | 0.529822 | 3_4:+76459556 | Msa0523110:CDS |
| GTTTGCCACTCCCTTGGAGG+AGG | 0.531497 | 3_4:+76458668 | Msa0523110:CDS |
| ACCATGGAAAGTATCAGATC+TGG | 0.532094 | 3_4:+76456736 | Msa0523110:CDS |
| GGAAAATATGTAAGCGAAGG+TGG | 0.533206 | 3_4:+76456616 | Msa0523110:CDS |
| GAACTCTGATCTCAGGAAGC+TGG | 0.535008 | 3_4:+76459097 | Msa0523110:CDS |
| TGTCAGATACCTTTGGAGAT+GGG | 0.536713 | 3_4:-76458775 | None:intergenic |
| GGATCTTGAGCCTGGTACCA+TGG | 0.537137 | 3_4:+76456720 | Msa0523110:CDS |
| TTTAGGGTTTGGTGTGTTTG+GGG | 0.538731 | 3_4:-76456473 | None:intergenic |
| TATCTGTCCCTCTCTTCGAT+TGG | 0.540481 | 3_4:+76456395 | Msa0523110:five_prime_UTR |
| CAATTCAGGAGATGTTTAGG+AGG | 0.541715 | 3_4:+76459477 | Msa0523110:CDS |
| CAGAACCCGTGCCTCCTCCA+AGG | 0.541892 | 3_4:-76458679 | None:intergenic |
| CAGTCAAGTATCGGCCATGT+CGG | 0.542390 | 3_4:-76459274 | None:intergenic |
| AGATCCATAAGAACTGCTCT+AGG | 0.542823 | 3_4:-76456703 | None:intergenic |
| AGAGGTGATACTTACAGCTA+GGG | 0.546469 | 3_4:-76458922 | None:intergenic |
| AATGGATGAGATGGAGTTCA+CGG | 0.548252 | 3_4:+76459565 | Msa0523110:CDS |
| GGACGAAAGATCTTACCAAA+AGG | 0.548367 | 3_4:-76456760 | None:intergenic |
| AAGCATGAGTCTTGGAGTAA+GGG | 0.549329 | 3_4:-76460059 | None:intergenic |
| TATGGAAAGAGAGGGAAATG+CGG | 0.552645 | 3_4:-76456364 | None:intergenic |
| GTATGTATCCCTTACTGTCC+CGG | 0.555378 | 3_4:+76459199 | Msa0523110:CDS |
| TTGCACCTCTCACTTCTCGT+GGG | 0.556219 | 3_4:+76459168 | Msa0523110:CDS |
| AGAAAATGCAGATGAGTGTA+TGG | 0.557071 | 3_4:+76458844 | Msa0523110:CDS |
| CGGAACTGACTCAACAAATG+TGG | 0.558969 | 3_4:+76459219 | Msa0523110:CDS |
| TTGCAGATGCAGTCAAGTAT+CGG | 0.563760 | 3_4:-76459283 | None:intergenic |
| GACATCTTCAAATTCTTGGG+TGG | 0.565762 | 3_4:-76459428 | None:intergenic |
| ACATCTTCAAATTCTTGGGT+GGG | 0.570008 | 3_4:-76459427 | None:intergenic |
| TTTGAGAAAATGGTTGCACT+TGG | 0.570956 | 3_4:+76459997 | Msa0523110:three_prime_UTR |
| ACCAGATCTGATACTTTCCA+TGG | 0.574855 | 3_4:-76456737 | None:intergenic |
| TTTGCATTGGTATACTGGGG+AGG | 0.575042 | 3_4:+76459541 | Msa0523110:CDS |
| CCAGGATGCAATAGCTGAGG+AGG | 0.575079 | 3_4:+76459634 | Msa0523110:CDS |
| TGATTATGAAGAAGAAGGTG+AGG | 0.578671 | 3_4:+76459661 | Msa0523110:CDS |
| GCTGGTAATAATTGGGCCAA+AGG | 0.579903 | 3_4:+76456811 | Msa0523110:CDS |
| AGAACCCGTGCCTCCTCCAA+GGG | 0.582447 | 3_4:-76458678 | None:intergenic |
| GATTTATTTATGGAAAGAGA+GGG | 0.584606 | 3_4:-76456372 | None:intergenic |
| AGATCAGAGTTCAATTGACC+AGG | 0.587313 | 3_4:-76459086 | None:intergenic |
| ACTGCATCTGCAATGTTCAG+AGG | 0.592344 | 3_4:+76459293 | Msa0523110:CDS |
| AGCGGTTCCAATCGAAGAGA+GGG | 0.594080 | 3_4:-76456402 | None:intergenic |
| AATTCAGGAGATGTTTAGGA+GGG | 0.594241 | 3_4:+76459478 | Msa0523110:CDS |
| AACAAATGAAATGAAACGAA+CGG | 0.594732 | 3_4:+76456280 | Msa0523110:five_prime_UTR |
| GCTGTAGTAGATACACAGAT+AGG | 0.595672 | 3_4:-76459761 | None:intergenic |
| TTAATATGGTAATAATGGAG+GGG | 0.596912 | 3_4:-76456338 | None:intergenic |
| GTCAAGTATCGGCCATGTCG+GGG | 0.598025 | 3_4:-76459272 | None:intergenic |
| CTGATTTCTGCAACTATGAG+CGG | 0.598763 | 3_4:+76459041 | Msa0523110:CDS |
| AGCAGAGTACCAACAATACC+AGG | 0.600651 | 3_4:+76459616 | Msa0523110:CDS |
| GCGGGGTTACATGTTGTCTG+AGG | 0.600876 | 3_4:+76459060 | Msa0523110:CDS |
| AGTCAGTTCCGGGACAGTAA+GGG | 0.601789 | 3_4:-76459207 | None:intergenic |
| GAAATGATACTCAATTGGAA+AGG | 0.601847 | 3_4:+76456638 | Msa0523110:CDS |
| GGAACTGACTCAACAAATGT+GGG | 0.606867 | 3_4:+76459220 | Msa0523110:CDS |
| ACAATGAAGCTTCTGGTGGT+AGG | 0.609506 | 3_4:+76456674 | Msa0523110:CDS |
| GCCAAAGGTCATTATACCGA+AGG | 0.611568 | 3_4:+76456826 | Msa0523110:CDS |
| TCATAGTTGCAGAAATCAGA+TGG | 0.613887 | 3_4:-76459037 | None:intergenic |
| AACAAAAGAATATGATTGAG+CGG | 0.615012 | 3_4:-76456420 | None:intergenic |
| GAGCGGTTCCAATCGAAGAG+AGG | 0.617083 | 3_4:-76456403 | None:intergenic |
| CACGTTCAAGGTGGCCAATG+CGG | 0.629178 | 3_4:+76456532 | Msa0523110:CDS |
| ACTGGAAAATATGTAAGCGA+AGG | 0.632683 | 3_4:+76456613 | Msa0523110:CDS |
| CAAAGACAAAGCGAATAGGT+AGG | 0.633490 | 3_4:-76459978 | None:intergenic |
| TGTGCTGCTGATCCCCGACA+TGG | 0.635297 | 3_4:+76459260 | Msa0523110:CDS |
| TGGAAAGAGAGGGAAATGCG+GGG | 0.638492 | 3_4:-76456362 | None:intergenic |
| AGGAAAGATGAGCACCAAAG+AGG | 0.640000 | 3_4:+76459313 | Msa0523110:CDS |
| TGAGACCCACGAGAAGTGAG+AGG | 0.646294 | 3_4:-76459173 | None:intergenic |
| TGAATGCGTCCTGTCAGACA+GGG | 0.651862 | 3_4:+76459882 | Msa0523110:three_prime_UTR |
| ATTGATATCAAAGATTAGGG+AGG | 0.653042 | 3_4:+76458715 | Msa0523110:CDS |
| GATTTCTGCAACTATGAGCG+GGG | 0.659247 | 3_4:+76459043 | Msa0523110:CDS |
| GGAAAGAGAGGGAAATGCGG+GGG | 0.664393 | 3_4:-76456361 | None:intergenic |
| ATACCAGGATGCAATAGCTG+AGG | 0.682886 | 3_4:+76459631 | Msa0523110:CDS |
| GAGGTGATACTTACAGCTAG+GGG | 0.687744 | 3_4:-76458921 | None:intergenic |
| GTAGCTGGATCAAACTATCG+GGG | 0.708017 | 3_4:+76459700 | Msa0523110:exon |
| GAGGTGATATGCGATGAACA+CGG | 0.708035 | 3_4:+76456580 | Msa0523110:CDS |
| GAGATCTTGCACGTTCAAGG+TGG | 0.713098 | 3_4:+76456523 | Msa0523110:CDS |
| TATTACAATGAAGCTTCTGG+TGG | 0.730410 | 3_4:+76456670 | Msa0523110:CDS |
| AATTGGATCCAAATTCTGGG+AGG | 0.748217 | 3_4:+76456561 | Msa0523110:CDS |
| GGATGAGATGGAGTTCACGG+AGG | 0.764427 | 3_4:+76459568 | Msa0523110:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAATTATTTATAAAAT+AGG | + | chr3_4:76457454-76457473 | Msa0523110:intron | 0.0% |
| !!! | ATTTTTATTTTGTTTTGTTT+TGG | - | chr3_4:76456308-76456327 | None:intergenic | 10.0% |
| !!! | GAAAAATAATAACTTTTTTT+TGG | - | chr3_4:76457558-76457577 | None:intergenic | 10.0% |
| !!! | AGAACTAATTTTTATAAAAA+TGG | + | chr3_4:76457735-76457754 | Msa0523110:intron | 10.0% |
| !!! | CATAAAATCTATTTTTTTAA+AGG | + | chr3_4:76457839-76457858 | Msa0523110:intron | 10.0% |
| !! | ATCAATTATAAAAAAAGTAA+AGG | - | chr3_4:76457878-76457897 | None:intergenic | 10.0% |
| !!! | TTTTTGTGTAATAATAATGA+TGG | + | chr3_4:76457274-76457293 | Msa0523110:intron | 15.0% |
| !!! | TAATAATGATGGTATATTTT+AGG | + | chr3_4:76457285-76457304 | Msa0523110:intron | 15.0% |
| !!! | AATAATGATGGTATATTTTA+GGG | + | chr3_4:76457286-76457305 | Msa0523110:intron | 15.0% |
| !! | TGAAATGAAATGAAATGAAA+TGG | - | chr3_4:76456450-76456469 | None:intergenic | 20.0% |
| !! | TATTATTACACAAAAAGTCA+CGG | - | chr3_4:76457270-76457289 | None:intergenic | 20.0% |
| !! | TTCATTTCAATTGTTTGTTT+AGG | + | chr3_4:76457595-76457614 | Msa0523110:intron | 20.0% |
| !!! | AATGGTTTTTTATGAATAGT+AGG | + | chr3_4:76457753-76457772 | Msa0523110:intron | 20.0% |
| !! | TTCTACCAAAAAAAAAATCA+TGG | + | chr3_4:76457966-76457985 | Msa0523110:intron | 20.0% |
| !! | AATTCCAATGTTTGTAAAAA+TGG | - | chr3_4:76458024-76458043 | None:intergenic | 20.0% |
| !! | AAAAAGAACAATATATTTCG+TGG | - | chr3_4:76458111-76458130 | None:intergenic | 20.0% |
| !!! | AAATTTCATTCAATTTTGTC+AGG | + | chr3_4:76458638-76458657 | Msa0523110:intron | 20.0% |
| !! | TCTATTGATATCAAAGATTA+GGG | + | chr3_4:76458712-76458731 | Msa0523110:CDS | 20.0% |
| !! | GTATAGTAATAAAACCATTA+GGG | - | chr3_4:76459731-76459750 | None:intergenic | 20.0% |
| !! | TGTATAGTAATAAAACCATT+AGG | - | chr3_4:76459732-76459751 | None:intergenic | 20.0% |
| !! | AAGAATAAAAGAAAAGCTTA+TGG | - | chr3_4:76459786-76459805 | None:intergenic | 20.0% |
| !! | TATTACACTTCAAATGAAAT+TGG | - | chr3_4:76459835-76459854 | None:intergenic | 20.0% |
| ! | GTTTCATTTCATTTGTTTCA+AGG | - | chr3_4:76456277-76456296 | None:intergenic | 25.0% |
| ! | AACAAATGAAATGAAACGAA+CGG | + | chr3_4:76456280-76456299 | Msa0523110:five_prime_UTR | 25.0% |
| !! | TTAATATGGTAATAATGGAG+GGG | - | chr3_4:76456341-76456360 | None:intergenic | 25.0% |
| !! | GTTAATATGGTAATAATGGA+GGG | - | chr3_4:76456342-76456361 | None:intergenic | 25.0% |
| ! | GATTTATTTATGGAAAGAGA+GGG | - | chr3_4:76456375-76456394 | None:intergenic | 25.0% |
| ! | AGATTTATTTATGGAAAGAG+AGG | - | chr3_4:76456376-76456395 | None:intergenic | 25.0% |
| ! | AACAAAAGAATATGATTGAG+CGG | - | chr3_4:76456423-76456442 | None:intergenic | 25.0% |
| ! | AAGATGAAGAATGAGATTTA+GGG | - | chr3_4:76456492-76456511 | None:intergenic | 25.0% |
| !! | AGAGGATCTAATTCAATTTT+TGG | + | chr3_4:76457145-76457164 | Msa0523110:intron | 25.0% |
| !! | GAGGATCTAATTCAATTTTT+GGG | + | chr3_4:76457146-76457165 | Msa0523110:intron | 25.0% |
| ! | TCATTCTGAGTACAAAATAT+AGG | - | chr3_4:76457242-76457261 | None:intergenic | 25.0% |
| ! | TTGATATGTCAGATATGATA+CGG | + | chr3_4:76457310-76457329 | Msa0523110:intron | 25.0% |
| ! | ATGCACTACTATAAAAGATA+AGG | - | chr3_4:76457429-76457448 | None:intergenic | 25.0% |
| ! | TTAAATAAAACATACCGACA+TGG | + | chr3_4:76457499-76457518 | Msa0523110:intron | 25.0% |
| ! | GAAAAAAATCTGAATCAAAC+AGG | - | chr3_4:76457536-76457555 | None:intergenic | 25.0% |
| !! | GCTAATAGCTTTTCATTTTA+AGG | - | chr3_4:76457662-76457681 | None:intergenic | 25.0% |
| ! | TGCCAAAAGAAAAATAATAC+CGG | - | chr3_4:76457945-76457964 | None:intergenic | 25.0% |
| !!! | TTTTTAAGAAAGTAGACTGA+AGG | + | chr3_4:76458209-76458228 | Msa0523110:intron | 25.0% |
| !!! | TTTTAAGAAAGTAGACTGAA+GGG | + | chr3_4:76458210-76458229 | Msa0523110:intron | 25.0% |
| ! | AATAGAGAGAAAATCTTATG+TGG | + | chr3_4:76458289-76458308 | Msa0523110:intron | 25.0% |
| ! | TTTGTAATATGTCACAGAAT+TGG | + | chr3_4:76458521-76458540 | Msa0523110:intron | 25.0% |
| ! | TGATCTTTATGTTAGATTTG+TGG | + | chr3_4:76458579-76458598 | Msa0523110:intron | 25.0% |
| ! | CTCTATTGATATCAAAGATT+AGG | + | chr3_4:76458711-76458730 | Msa0523110:CDS | 25.0% |
| ! | ATTCTTCATACTTTGTTGAA+TGG | + | chr3_4:76459369-76459388 | Msa0523110:CDS | 25.0% |
| !!! | GAATACATTCATAGCTTTAT+AGG | - | chr3_4:76459929-76459948 | None:intergenic | 25.0% |
| ! | AAGCTGGAAAAAAAAATGTA+TGG | + | chr3_4:76460089-76460108 | Msa0523110:three_prime_UTR | 25.0% |
| ! | TTGAGAAGATAATCAAAAAG+TGG | + | chr3_4:76460134-76460153 | Msa0523110:three_prime_UTR | 25.0% |
| GGTTAATATGGTAATAATGG+AGG | - | chr3_4:76456343-76456362 | None:intergenic | 30.0% | |
| GGGACAGATAGATTTATTTA+TGG | - | chr3_4:76456385-76456404 | None:intergenic | 30.0% | |
| GAAGATGAAGAATGAGATTT+AGG | - | chr3_4:76456493-76456512 | None:intergenic | 30.0% | |
| GAAATGATACTCAATTGGAA+AGG | + | chr3_4:76456638-76456657 | Msa0523110:CDS | 30.0% | |
| CTCAATTGTGATTAATGTCT+TGG | + | chr3_4:76456943-76456962 | Msa0523110:intron | 30.0% | |
| TACTTCAATTACTATACTGC+AGG | - | chr3_4:76457096-76457115 | None:intergenic | 30.0% | |
| ! | GAAACATGATGATGATTGAA+AGG | + | chr3_4:76457387-76457406 | Msa0523110:intron | 30.0% |
| CACTACTATAAAAGATAAGG+TGG | - | chr3_4:76457426-76457445 | None:intergenic | 30.0% | |
| ATTGATTGTAGTCACAGAAA+TGG | + | chr3_4:76457892-76457911 | Msa0523110:intron | 30.0% | |
| TTGATTGTAGTCACAGAAAT+GGG | + | chr3_4:76457893-76457912 | Msa0523110:intron | 30.0% | |
| !! | GACCGGTATTATTTTTCTTT+TGG | + | chr3_4:76457940-76457959 | Msa0523110:intron | 30.0% |
| !!! | ACGTGCCATGATTTTTTTTT+TGG | - | chr3_4:76457974-76457993 | None:intergenic | 30.0% |
| CCAATGTTTGTAAAAATGGT+TGG | - | chr3_4:76458020-76458039 | None:intergenic | 30.0% | |
| !! | CCAACCATTTTTACAAACAT+TGG | + | chr3_4:76458017-76458036 | Msa0523110:intron | 30.0% |
| ! | TACATTGGTTATTCTACAGA+TGG | - | chr3_4:76458085-76458104 | None:intergenic | 30.0% |
| TATATTTCGTGGATCTACAT+TGG | - | chr3_4:76458100-76458119 | None:intergenic | 30.0% | |
| AGTGTTTCTCAACAATAGAA+TGG | + | chr3_4:76458470-76458489 | Msa0523110:intron | 30.0% | |
| GTGTTTCTCAACAATAGAAT+GGG | + | chr3_4:76458471-76458490 | Msa0523110:intron | 30.0% | |
| TGTTTCTCAACAATAGAATG+GGG | + | chr3_4:76458472-76458491 | Msa0523110:intron | 30.0% | |
| ATTGATATCAAAGATTAGGG+AGG | + | chr3_4:76458715-76458734 | Msa0523110:CDS | 30.0% | |
| ACAGATAGTGTAGCATTATA+TGG | - | chr3_4:76458812-76458831 | None:intergenic | 30.0% | |
| TCAGTACCTCAATTAATCAA+AGG | + | chr3_4:76458951-76458970 | Msa0523110:intron | 30.0% | |
| AGACAACCTTTGATTAATTG+AGG | - | chr3_4:76458960-76458979 | None:intergenic | 30.0% | |
| AGAGAGTAACATGAATGATT+TGG | + | chr3_4:76459592-76459611 | Msa0523110:CDS | 30.0% | |
| GAAGATGATTATGAAGAAGA+AGG | + | chr3_4:76459656-76459675 | Msa0523110:CDS | 30.0% | |
| TGATTATCTTCTCAACCAAA+CGG | - | chr3_4:76460129-76460148 | None:intergenic | 30.0% | |
| GGGGGTTAATATGGTAATAA+TGG | - | chr3_4:76456346-76456365 | None:intergenic | 35.0% | |
| !! | ATTTAGGGTTTGGTGTGTTT+GGG | - | chr3_4:76456477-76456496 | None:intergenic | 35.0% |
| ! | GAAGAATGAGATTTAGGGTT+TGG | - | chr3_4:76456487-76456506 | None:intergenic | 35.0% |
| ACCAAATTGGATCCAAATTC+TGG | + | chr3_4:76456557-76456576 | Msa0523110:CDS | 35.0% | |
| CCAAATTGGATCCAAATTCT+GGG | + | chr3_4:76456558-76456577 | Msa0523110:CDS | 35.0% | |
| ! | TCGCTTACATATTTTCCAGT+TGG | - | chr3_4:76456613-76456632 | None:intergenic | 35.0% |
| ACTGGAAAATATGTAAGCGA+AGG | + | chr3_4:76456613-76456632 | Msa0523110:CDS | 35.0% | |
| AGGTGGAAATGATACTCAAT+TGG | + | chr3_4:76456633-76456652 | Msa0523110:CDS | 35.0% | |
| GTGTATTACAATGAAGCTTC+TGG | + | chr3_4:76456667-76456686 | Msa0523110:CDS | 35.0% | |
| TATTACAATGAAGCTTCTGG+TGG | + | chr3_4:76456670-76456689 | Msa0523110:CDS | 35.0% | |
| TGTCCAAACACGAAATTATC+AGG | - | chr3_4:76456784-76456803 | None:intergenic | 35.0% | |
| AATTTCGTGTTTGGACAATC+TGG | + | chr3_4:76456787-76456806 | Msa0523110:CDS | 35.0% | |
| !! | AATCTGGTGCTGGTAATAAT+TGG | + | chr3_4:76456803-76456822 | Msa0523110:CDS | 35.0% |
| !! | ATCTGGTGCTGGTAATAATT+GGG | + | chr3_4:76456804-76456823 | Msa0523110:CDS | 35.0% |
| AATCGTCACGATTTCAATCA+TGG | - | chr3_4:76457043-76457062 | None:intergenic | 35.0% | |
| !! | TACTGACTTTCTGTAGATCT+TGG | + | chr3_4:76457364-76457383 | Msa0523110:intron | 35.0% |
| ! | ACTGACTTTCTGTAGATCTT+GGG | + | chr3_4:76457365-76457384 | Msa0523110:intron | 35.0% |
| ATACCGACATGGAGTATATA+GGG | + | chr3_4:76457510-76457529 | Msa0523110:intron | 35.0% | |
| GAAAAATAATACCGGTCTGT+CGG | - | chr3_4:76457937-76457956 | None:intergenic | 35.0% | |
| !!! | CAAGACCAAGAATTTTGGTT+TGG | + | chr3_4:76458313-76458332 | Msa0523110:intron | 35.0% |
| TGTGACCAAACCAAAATTCT+TGG | - | chr3_4:76458433-76458452 | None:intergenic | 35.0% | |
| TGTGACCAAACCAAAATTCT+TGG | + | chr3_4:76458433-76458452 | Msa0523110:intron | 35.0% | |
| ATTGTTGAGAAACACTTGTG+TGG | - | chr3_4:76458466-76458485 | None:intergenic | 35.0% | |
| AAAGTAAGCATCATTCTGTC+TGG | - | chr3_4:76458746-76458765 | None:intergenic | 35.0% | |
| AGAAAATGCAGATGAGTGTA+TGG | + | chr3_4:76458844-76458863 | Msa0523110:CDS | 35.0% | |
| CACTTTATGACATTTGCTTC+AGG | + | chr3_4:76458882-76458901 | Msa0523110:CDS | 35.0% | |
| !! | TTGAGGTACTGAAAAAGAAG+AGG | - | chr3_4:76458943-76458962 | None:intergenic | 35.0% |
| CTCATTGTGTAATTGCAGTT+GGG | + | chr3_4:76459006-76459025 | Msa0523110:intron | 35.0% | |
| TCATTGTGTAATTGCAGTTG+GGG | + | chr3_4:76459007-76459026 | Msa0523110:intron | 35.0% | |
| TCATAGTTGCAGAAATCAGA+TGG | - | chr3_4:76459040-76459059 | None:intergenic | 35.0% | |
| CCATAAAAAAGTGAAGACGA+GGG | - | chr3_4:76459142-76459161 | None:intergenic | 35.0% | |
| ACCATAAAAAAGTGAAGACG+AGG | - | chr3_4:76459143-76459162 | None:intergenic | 35.0% | |
| !!! | CGTCTTCACTTTTTTATGGT+TGG | + | chr3_4:76459143-76459162 | Msa0523110:CDS | 35.0% |
| ! | GATTTGTTCATCAACCTCTT+TGG | - | chr3_4:76459330-76459349 | None:intergenic | 35.0% |
| ACACTAGACTTCACATTGTT+GGG | - | chr3_4:76459398-76459417 | None:intergenic | 35.0% | |
| ACATCTTCAAATTCTTGGGT+GGG | - | chr3_4:76459430-76459449 | None:intergenic | 35.0% | |
| GACGACATCTTCAAATTCTT+GGG | - | chr3_4:76459434-76459453 | None:intergenic | 35.0% | |
| !! | AAGATGTCGTCCACTTTTAT+TGG | + | chr3_4:76459443-76459462 | Msa0523110:CDS | 35.0% |
| !! | AGATGTCGTCCACTTTTATT+GGG | + | chr3_4:76459444-76459463 | Msa0523110:CDS | 35.0% |
| AGTTGAGTTCCCAATAAAAG+TGG | - | chr3_4:76459456-76459475 | None:intergenic | 35.0% | |
| CTTCAATTCAGGAGATGTTT+AGG | + | chr3_4:76459474-76459493 | Msa0523110:CDS | 35.0% | |
| AATTCAGGAGATGTTTAGGA+GGG | + | chr3_4:76459478-76459497 | Msa0523110:CDS | 35.0% | |
| !! | CCTTTTTGCATTGGTATACT+GGG | + | chr3_4:76459537-76459556 | Msa0523110:CDS | 35.0% |
| !! | CTTTTTGCATTGGTATACTG+GGG | + | chr3_4:76459538-76459557 | Msa0523110:CDS | 35.0% |
| TGATTATGAAGAAGAAGGTG+AGG | + | chr3_4:76459661-76459680 | Msa0523110:CDS | 35.0% | |
| TTCTCAAAGACAAAGCGAAT+AGG | - | chr3_4:76459985-76460004 | None:intergenic | 35.0% | |
| ! | TCGCTTTGTCTTTGAGAAAA+TGG | + | chr3_4:76459987-76460006 | Msa0523110:three_prime_UTR | 35.0% |
| TTTGAGAAAATGGTTGCACT+TGG | + | chr3_4:76459997-76460016 | Msa0523110:three_prime_UTR | 35.0% | |
| ATCGAGTGTAAAGCAAAGAT+AGG | - | chr3_4:76460029-76460048 | None:intergenic | 35.0% | |
| TTCAAATGAAGCATGAGTCT+TGG | - | chr3_4:76460070-76460089 | None:intergenic | 35.0% | |
| ! | TATGGTAATAATGGAGGGGA+TGG | - | chr3_4:76456337-76456356 | None:intergenic | 40.0% |
| TATGGAAAGAGAGGGAAATG+CGG | - | chr3_4:76456367-76456386 | None:intergenic | 40.0% | |
| !! | TTTAGGGTTTGGTGTGTTTG+GGG | - | chr3_4:76456476-76456495 | None:intergenic | 40.0% |
| !! | GATTTAGGGTTTGGTGTGTT+TGG | - | chr3_4:76456478-76456497 | None:intergenic | 40.0% |
| ATCCAATTTGGTTACCGCAT+TGG | - | chr3_4:76456549-76456568 | None:intergenic | 40.0% | |
| CCCAGAATTTGGATCCAATT+TGG | - | chr3_4:76456561-76456580 | None:intergenic | 40.0% | |
| AATTGGATCCAAATTCTGGG+AGG | + | chr3_4:76456561-76456580 | Msa0523110:CDS | 40.0% | |
| GGAAAATATGTAAGCGAAGG+TGG | + | chr3_4:76456616-76456635 | Msa0523110:CDS | 40.0% | |
| TGTTCCTAGAGCAGTTCTTA+TGG | + | chr3_4:76456699-76456718 | Msa0523110:CDS | 40.0% | |
| AGATCCATAAGAACTGCTCT+AGG | - | chr3_4:76456706-76456725 | None:intergenic | 40.0% | |
| !! | ACCATGGAAAGTATCAGATC+TGG | + | chr3_4:76456736-76456755 | Msa0523110:CDS | 40.0% |
| ACCAGATCTGATACTTTCCA+TGG | - | chr3_4:76456740-76456759 | None:intergenic | 40.0% | |
| ! | AGTATCAGATCTGGTCCTTT+TGG | + | chr3_4:76456745-76456764 | Msa0523110:CDS | 40.0% |
| GGACGAAAGATCTTACCAAA+AGG | - | chr3_4:76456763-76456782 | None:intergenic | 40.0% | |
| CGTCCTGATAATTTCGTGTT+TGG | + | chr3_4:76456778-76456797 | Msa0523110:CDS | 40.0% | |
| ACCTTCGGTATAATGACCTT+TGG | - | chr3_4:76456830-76456849 | None:intergenic | 40.0% | |
| GAGAATTGTGATTGCTTGCA+AGG | + | chr3_4:76456895-76456914 | Msa0523110:CDS | 40.0% | |
| TTGAAATCGTGACGATTCAG+AGG | + | chr3_4:76457046-76457065 | Msa0523110:intron | 40.0% | |
| ! | GTGCACTCTGAAAATTCTAG+AGG | + | chr3_4:76457127-76457146 | Msa0523110:intron | 40.0% |
| ! | ATGATGATTGAAAGGCATGC+AGG | + | chr3_4:76457395-76457414 | Msa0523110:intron | 40.0% |
| CATACCGACATGGAGTATAT+AGG | + | chr3_4:76457509-76457528 | Msa0523110:intron | 40.0% | |
| AGTAGTGTTACACAGAGCTA+TGG | + | chr3_4:76458242-76458261 | Msa0523110:intron | 40.0% | |
| TATGGTCAAGGTTTCCTAAC+TGG | + | chr3_4:76458260-76458279 | Msa0523110:intron | 40.0% | |
| ATGGTCAAGGTTTCCTAACT+GGG | + | chr3_4:76458261-76458280 | Msa0523110:intron | 40.0% | |
| TCTCTATTGTTTGCCCAGTT+AGG | - | chr3_4:76458277-76458296 | None:intergenic | 40.0% | |
| ! | GTGGTCAAGACCAAGAATTT+TGG | + | chr3_4:76458308-76458327 | Msa0523110:intron | 40.0% |
| AAGAGAGAAGAGAGAGAAGA+GGG | + | chr3_4:76458352-76458371 | Msa0523110:intron | 40.0% | |
| !!! | CTGGACCAAGAATTTTGGTT+TGG | - | chr3_4:76458441-76458460 | None:intergenic | 40.0% |
| CAAACCAAAATTCTTGGTCC+AGG | + | chr3_4:76458439-76458458 | Msa0523110:intron | 40.0% | |
| ! | TGTCAGATACCTTTGGAGAT+GGG | - | chr3_4:76458778-76458797 | None:intergenic | 40.0% |
| ACAACTGTGTCAGATACCTT+TGG | - | chr3_4:76458785-76458804 | None:intergenic | 40.0% | |
| ! | CATCTGCATTTTCTACCAGT+TGG | - | chr3_4:76458838-76458857 | None:intergenic | 40.0% |
| AGAGGTGATACTTACAGCTA+GGG | - | chr3_4:76458925-76458944 | None:intergenic | 40.0% | |
| AAGAGGTGATACTTACAGCT+AGG | - | chr3_4:76458926-76458945 | None:intergenic | 40.0% | |
| CCAACTGCAATTACACAATG+AGG | - | chr3_4:76459008-76459027 | None:intergenic | 40.0% | |
| CCTCATTGTGTAATTGCAGT+TGG | + | chr3_4:76459005-76459024 | Msa0523110:intron | 40.0% | |
| CTGATTTCTGCAACTATGAG+CGG | + | chr3_4:76459041-76459060 | Msa0523110:CDS | 40.0% | |
| TGATTTCTGCAACTATGAGC+GGG | + | chr3_4:76459042-76459061 | Msa0523110:CDS | 40.0% | |
| AGATCAGAGTTCAATTGACC+AGG | - | chr3_4:76459089-76459108 | None:intergenic | 40.0% | |
| GTCAATTGAACTCTGATCTC+AGG | + | chr3_4:76459090-76459109 | Msa0523110:CDS | 40.0% | |
| AAAAGTGAAGACGAGGGAAT+GGG | - | chr3_4:76459136-76459155 | None:intergenic | 40.0% | |
| AAAAAGTGAAGACGAGGGAA+TGG | - | chr3_4:76459137-76459156 | None:intergenic | 40.0% | |
| !!! | CCCTCGTCTTCACTTTTTTA+TGG | + | chr3_4:76459139-76459158 | Msa0523110:CDS | 40.0% |
| ! | ACATTTGTTGAGTCAGTTCC+GGG | - | chr3_4:76459220-76459239 | None:intergenic | 40.0% |
| ! | CACATTTGTTGAGTCAGTTC+CGG | - | chr3_4:76459221-76459240 | None:intergenic | 40.0% |
| ! | GGAACTGACTCAACAAATGT+GGG | + | chr3_4:76459220-76459239 | Msa0523110:CDS | 40.0% |
| AGCAGCACACATCATATTCT+TGG | - | chr3_4:76459249-76459268 | None:intergenic | 40.0% | |
| TTGCAGATGCAGTCAAGTAT+CGG | - | chr3_4:76459286-76459305 | None:intergenic | 40.0% | |
| CACACTAGACTTCACATTGT+TGG | - | chr3_4:76459399-76459418 | None:intergenic | 40.0% | |
| GACATCTTCAAATTCTTGGG+TGG | - | chr3_4:76459431-76459450 | None:intergenic | 40.0% | |
| GGACGACATCTTCAAATTCT+TGG | - | chr3_4:76459435-76459454 | None:intergenic | 40.0% | |
| TGGGAACTCAACTTCAATTC+AGG | + | chr3_4:76459463-76459482 | Msa0523110:CDS | 40.0% | |
| CAATTCAGGAGATGTTTAGG+AGG | + | chr3_4:76459477-76459496 | Msa0523110:CDS | 40.0% | |
| AGCAGTTTACTGCAATGTTC+CGG | + | chr3_4:76459507-76459526 | Msa0523110:CDS | 40.0% | |
| !! | GCCTTTTTGCATTGGTATAC+TGG | + | chr3_4:76459536-76459555 | Msa0523110:CDS | 40.0% |
| CCCAGTATACCAATGCAAAA+AGG | - | chr3_4:76459540-76459559 | None:intergenic | 40.0% | |
| AATGGATGAGATGGAGTTCA+CGG | + | chr3_4:76459565-76459584 | Msa0523110:CDS | 40.0% | |
| CTATTGCATCCTGGTATTGT+TGG | - | chr3_4:76459628-76459647 | None:intergenic | 40.0% | |
| AGAAGGTGAGGAACATTATG+AGG | + | chr3_4:76459673-76459692 | Msa0523110:CDS | 40.0% | |
| CAGTAGCTGGATCAAACTAT+CGG | + | chr3_4:76459698-76459717 | Msa0523110:exon | 40.0% | |
| AGTAGCTGGATCAAACTATC+GGG | + | chr3_4:76459699-76459718 | Msa0523110:exon | 40.0% | |
| GCTGTAGTAGATACACAGAT+AGG | - | chr3_4:76459764-76459783 | None:intergenic | 40.0% | |
| ATAGAATAACCCTGTCTGAC+AGG | - | chr3_4:76459894-76459913 | None:intergenic | 40.0% | |
| CAAAGACAAAGCGAATAGGT+AGG | - | chr3_4:76459981-76460000 | None:intergenic | 40.0% | |
| AAGCATGAGTCTTGGAGTAA+GGG | - | chr3_4:76460062-76460081 | None:intergenic | 40.0% | |
| CTCATGCTTCATTTGAAAGC+TGG | + | chr3_4:76460073-76460092 | Msa0523110:three_prime_UTR | 40.0% | |
| ! | GTAATAATGGAGGGGATGGA+GGG | - | chr3_4:76456333-76456352 | None:intergenic | 45.0% |
| ATGGAAAGAGAGGGAAATGC+GGG | - | chr3_4:76456366-76456385 | None:intergenic | 45.0% | |
| TATCTGTCCCTCTCTTCGAT+TGG | + | chr3_4:76456395-76456414 | Msa0523110:five_prime_UTR | 45.0% | |
| AGAGAGATCTTGCACGTTCA+AGG | + | chr3_4:76456520-76456539 | Msa0523110:CDS | 45.0% | |
| GCATATCACCTCCCAGAATT+TGG | - | chr3_4:76456572-76456591 | None:intergenic | 45.0% | |
| GAGGTGATATGCGATGAACA+CGG | + | chr3_4:76456580-76456599 | Msa0523110:CDS | 45.0% | |
| ACAATGAAGCTTCTGGTGGT+AGG | + | chr3_4:76456674-76456693 | Msa0523110:CDS | 45.0% | |
| GTTCTTATGGATCTTGAGCC+TGG | + | chr3_4:76456712-76456731 | Msa0523110:CDS | 45.0% | |
| CTGATACTTTCCATGGTACC+AGG | - | chr3_4:76456733-76456752 | None:intergenic | 45.0% | |
| GCTGGTAATAATTGGGCCAA+AGG | + | chr3_4:76456811-76456830 | Msa0523110:CDS | 45.0% | |
| GCCAAAGGTCATTATACCGA+AGG | + | chr3_4:76456826-76456845 | Msa0523110:CDS | 45.0% | |
| GTCAATCAACTCAGCACCTT+CGG | - | chr3_4:76456845-76456864 | None:intergenic | 45.0% | |
| ! | ATGATTGAAAGGCATGCAGG+AGG | + | chr3_4:76457398-76457417 | Msa0523110:intron | 45.0% |
| ! | TGATTGAAAGGCATGCAGGA+GGG | + | chr3_4:76457399-76457418 | Msa0523110:intron | 45.0% |
| AGGCCCTATATACTCCATGT+CGG | - | chr3_4:76457516-76457535 | None:intergenic | 45.0% | |
| CTGTCGGTGGTTGTAATCAT+AGG | - | chr3_4:76457921-76457940 | None:intergenic | 45.0% | |
| AAATAATACCGGTCTGTCGG+TGG | - | chr3_4:76457934-76457953 | None:intergenic | 45.0% | |
| GTTACACAGAGCTATGGTCA+AGG | + | chr3_4:76458248-76458267 | Msa0523110:intron | 45.0% | |
| GAAGAGAGAAGAGAGAGAAG+AGG | + | chr3_4:76458351-76458370 | Msa0523110:intron | 45.0% | |
| GAGAGAAGAGAAGAGAGAGA+AGG | + | chr3_4:76458395-76458414 | Msa0523110:intron | 45.0% | |
| ! | TGGACCTGGACCAAGAATTT+TGG | - | chr3_4:76458446-76458465 | None:intergenic | 45.0% |
| !! | TTTCAAGTTTGCCACTCCCT+TGG | + | chr3_4:76458662-76458681 | Msa0523110:CDS | 45.0% |
| ! | CTCTGTTTTCCCATCTCCAA+AGG | + | chr3_4:76458766-76458785 | Msa0523110:CDS | 45.0% |
| ! | GTGTCAGATACCTTTGGAGA+TGG | - | chr3_4:76458779-76458798 | None:intergenic | 45.0% |
| TACACTATCTGTCCACCAAC+TGG | + | chr3_4:76458820-76458839 | Msa0523110:CDS | 45.0% | |
| ! | CTGCATTTTCTACCAGTTGG+TGG | - | chr3_4:76458835-76458854 | None:intergenic | 45.0% |
| GAGGTGATACTTACAGCTAG+GGG | - | chr3_4:76458924-76458943 | None:intergenic | 45.0% | |
| GATTTCTGCAACTATGAGCG+GGG | + | chr3_4:76459043-76459062 | Msa0523110:CDS | 45.0% | |
| ! | ACATGTTGTCTGAGGTTTCC+TGG | + | chr3_4:76459068-76459087 | Msa0523110:CDS | 45.0% |
| GTATGTATCCCTTACTGTCC+CGG | + | chr3_4:76459199-76459218 | Msa0523110:CDS | 45.0% | |
| ! | CGGAACTGACTCAACAAATG+TGG | + | chr3_4:76459219-76459238 | Msa0523110:CDS | 45.0% |
| ACTGCATCTGCAATGTTCAG+AGG | + | chr3_4:76459293-76459312 | Msa0523110:CDS | 45.0% | |
| AGGAAAGATGAGCACCAAAG+AGG | + | chr3_4:76459313-76459332 | Msa0523110:CDS | 45.0% | |
| AATGCAAAAAGGCTTTGCGC+CGG | - | chr3_4:76459529-76459548 | None:intergenic | 45.0% | |
| ! | TTTGCATTGGTATACTGGGG+AGG | + | chr3_4:76459541-76459560 | Msa0523110:CDS | 45.0% |
| ! | TTGCATTGGTATACTGGGGA+GGG | + | chr3_4:76459542-76459561 | Msa0523110:CDS | 45.0% |
| ! | AGCAGAGTACCAACAATACC+AGG | + | chr3_4:76459616-76459635 | Msa0523110:CDS | 45.0% |
| ATACCAGGATGCAATAGCTG+AGG | + | chr3_4:76459631-76459650 | Msa0523110:CDS | 45.0% | |
| ACATTATGAGGAGCAGTAGC+TGG | + | chr3_4:76459685-76459704 | Msa0523110:exon | 45.0% | |
| GTAGCTGGATCAAACTATCG+GGG | + | chr3_4:76459700-76459719 | Msa0523110:exon | 45.0% | |
| TCTTGGAGTAAGGGACTTGA+TGG | - | chr3_4:76460053-76460072 | None:intergenic | 45.0% | |
| GAAGCATGAGTCTTGGAGTA+AGG | - | chr3_4:76460063-76460082 | None:intergenic | 45.0% | |
| GAAATAGTGTGCATGCCGTT+TGG | + | chr3_4:76460111-76460130 | Msa0523110:three_prime_UTR | 45.0% | |
| ! | GGTAATAATGGAGGGGATGG+AGG | - | chr3_4:76456334-76456353 | None:intergenic | 50.0% |
| GGGAAATGCGGGGGTTAATA+TGG | - | chr3_4:76456355-76456374 | None:intergenic | 50.0% | |
| TGGAAAGAGAGGGAAATGCG+GGG | - | chr3_4:76456365-76456384 | None:intergenic | 50.0% | |
| AGCGGTTCCAATCGAAGAGA+GGG | - | chr3_4:76456405-76456424 | None:intergenic | 50.0% | |
| GAGATCTTGCACGTTCAAGG+TGG | + | chr3_4:76456523-76456542 | Msa0523110:CDS | 50.0% | |
| GGCCAATGCGGTAACCAAAT+TGG | + | chr3_4:76456544-76456563 | Msa0523110:CDS | 50.0% | |
| !! | GAACACGGCATTGATCCAAC+TGG | + | chr3_4:76456595-76456614 | Msa0523110:CDS | 50.0% |
| GTGTTTGGACAATCTGGTGC+TGG | + | chr3_4:76456793-76456812 | Msa0523110:CDS | 50.0% | |
| GATTACAACCACCGACAGAC+CGG | + | chr3_4:76457923-76457942 | Msa0523110:intron | 50.0% | |
| GAGAAACACTTGTGTGGACC+TGG | - | chr3_4:76458460-76458479 | None:intergenic | 50.0% | |
| GAACTCTGATCTCAGGAAGC+TGG | + | chr3_4:76459097-76459116 | Msa0523110:CDS | 50.0% | |
| TTTGCACCTCTCACTTCTCG+TGG | + | chr3_4:76459167-76459186 | Msa0523110:CDS | 50.0% | |
| TTGCACCTCTCACTTCTCGT+GGG | + | chr3_4:76459168-76459187 | Msa0523110:CDS | 50.0% | |
| AGTCAGTTCCGGGACAGTAA+GGG | - | chr3_4:76459210-76459229 | None:intergenic | 50.0% | |
| !! | AGTCAAGTATCGGCCATGTC+GGG | - | chr3_4:76459276-76459295 | None:intergenic | 50.0% |
| !! | CAGTCAAGTATCGGCCATGT+CGG | - | chr3_4:76459277-76459296 | None:intergenic | 50.0% |
| ! | GGCGCAAAGCCTTTTTGCAT+TGG | + | chr3_4:76459528-76459547 | Msa0523110:CDS | 50.0% |
| TTGGTATACTGGGGAGGGAA+TGG | + | chr3_4:76459547-76459566 | Msa0523110:CDS | 50.0% | |
| CTATCGGGGTAATGCCCTAA+TGG | + | chr3_4:76459714-76459733 | Msa0523110:three_prime_UTR | 50.0% | |
| TGAATGCGTCCTGTCAGACA+GGG | + | chr3_4:76459882-76459901 | Msa0523110:three_prime_UTR | 50.0% | |
| GGAAAGAGAGGGAAATGCGG+GGG | - | chr3_4:76456364-76456383 | None:intergenic | 55.0% | |
| GAGCGGTTCCAATCGAAGAG+AGG | - | chr3_4:76456406-76456425 | None:intergenic | 55.0% | |
| CACGTTCAAGGTGGCCAATG+CGG | + | chr3_4:76456532-76456551 | Msa0523110:CDS | 55.0% | |
| GGATCTTGAGCCTGGTACCA+TGG | + | chr3_4:76456720-76456739 | Msa0523110:CDS | 55.0% | |
| CAAGTTTGCCACTCCCTTGG+AGG | + | chr3_4:76458665-76458684 | Msa0523110:CDS | 55.0% | |
| GCGGGGTTACATGTTGTCTG+AGG | + | chr3_4:76459060-76459079 | Msa0523110:CDS | 55.0% | |
| TGAGACCCACGAGAAGTGAG+AGG | - | chr3_4:76459176-76459195 | None:intergenic | 55.0% | |
| GAGTCAGTTCCGGGACAGTA+AGG | - | chr3_4:76459211-76459230 | None:intergenic | 55.0% | |
| !! | GTCAAGTATCGGCCATGTCG+GGG | - | chr3_4:76459275-76459294 | None:intergenic | 55.0% |
| TGGGGAGGGAATGGATGAGA+TGG | + | chr3_4:76459556-76459575 | Msa0523110:CDS | 55.0% | |
| GGATGAGATGGAGTTCACGG+AGG | + | chr3_4:76459568-76459587 | Msa0523110:CDS | 55.0% | |
| CCTCCTCAGCTATTGCATCC+TGG | - | chr3_4:76459637-76459656 | None:intergenic | 55.0% | |
| CCAGGATGCAATAGCTGAGG+AGG | + | chr3_4:76459634-76459653 | Msa0523110:CDS | 55.0% | |
| CTGAATGCGTCCTGTCAGAC+AGG | + | chr3_4:76459881-76459900 | Msa0523110:three_prime_UTR | 55.0% | |
| GTTTGCCACTCCCTTGGAGG+AGG | + | chr3_4:76458668-76458687 | Msa0523110:CDS | 60.0% | |
| AGAACCCGTGCCTCCTCCAA+GGG | - | chr3_4:76458681-76458700 | None:intergenic | 60.0% | |
| ! | TGTGCTGCTGATCCCCGACA+TGG | + | chr3_4:76459260-76459279 | Msa0523110:CDS | 60.0% |
| CCACTCCCTTGGAGGAGGCA+CGG | + | chr3_4:76458673-76458692 | Msa0523110:CDS | 65.0% | |
| ! | CACTCCCTTGGAGGAGGCAC+GGG | + | chr3_4:76458674-76458693 | Msa0523110:CDS | 65.0% |
| CAGAACCCGTGCCTCCTCCA+AGG | - | chr3_4:76458682-76458701 | None:intergenic | 65.0% | |
| ! | CTTGGAGGAGGCACGGGTTC+TGG | + | chr3_4:76458680-76458699 | Msa0523110:CDS | 65.0% |
| ! | AGGAGGCACGGGTTCTGGCA+TGG | + | chr3_4:76458685-76458704 | Msa0523110:CDS | 65.0% |
| ! | GGAGGCACGGGTTCTGGCAT+GGG | + | chr3_4:76458686-76458705 | Msa0523110:CDS | 65.0% |
| CCGTGCCTCCTCCAAGGGAG+TGG | - | chr3_4:76458676-76458695 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_4 | gene | 76456274 | 76460172 | 76456274 | ID=Msa0523110;Name=Msa0523110 |
| chr3_4 | mRNA | 76456274 | 76460172 | 76456274 | ID=Msa0523110-mRNA-1;Parent=Msa0523110;Name=Msa0523110-mRNA-1;_AED=0.01;_eAED=0.01;_QI=243|1|1|1|1|1|3|469|449 |
| chr3_4 | exon | 76456274 | 76456916 | 76456274 | ID=Msa0523110-mRNA-1:exon:22121;Parent=Msa0523110-mRNA-1 |
| chr3_4 | exon | 76458660 | 76458929 | 76458660 | ID=Msa0523110-mRNA-1:exon:22122;Parent=Msa0523110-mRNA-1 |
| chr3_4 | exon | 76459024 | 76460172 | 76459024 | ID=Msa0523110-mRNA-1:exon:22123;Parent=Msa0523110-mRNA-1 |
| chr3_4 | five_prime_UTR | 76456274 | 76456516 | 76456274 | ID=Msa0523110-mRNA-1:five_prime_utr;Parent=Msa0523110-mRNA-1 |
| chr3_4 | CDS | 76456517 | 76456916 | 76456517 | ID=Msa0523110-mRNA-1:cds;Parent=Msa0523110-mRNA-1 |
| chr3_4 | CDS | 76458660 | 76458929 | 76458660 | ID=Msa0523110-mRNA-1:cds;Parent=Msa0523110-mRNA-1 |
| chr3_4 | CDS | 76459024 | 76459703 | 76459024 | ID=Msa0523110-mRNA-1:cds;Parent=Msa0523110-mRNA-1 |
| chr3_4 | three_prime_UTR | 76459704 | 76460172 | 76459704 | ID=Msa0523110-mRNA-1:three_prime_utr;Parent=Msa0523110-mRNA-1 |
| Gene Sequence |
| Protein sequence |
