Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0087020 | PNY14079.1 | 65.660 | 265 | 91 | 0 | 150 | 414 | 266 | 530 | 4.72e-119 | 374 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0087020 | A0A2K3PFL3 | 65.660 | 265 | 91 | 0 | 150 | 414 | 266 | 530 | 2.25e-119 | 374 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0017280 | Msa0087020 | 0.830422 | 2.962979e-55 | -8.615850e-47 |
| Msa0017290 | Msa0087020 | 0.991580 | 2.068112e-188 | -8.615850e-47 |
| Msa0065500 | Msa0087020 | 0.966657 | 3.247095e-126 | -8.615850e-47 |
| Msa0087010 | Msa0087020 | 0.833202 | 6.106014e-56 | -8.615850e-47 |
| Msa0087020 | Msa0157210 | 0.877267 | 7.208894e-69 | -8.615850e-47 |
| Msa0087020 | Msa0520410 | 0.801413 | 9.112669e-49 | -8.615850e-47 |
| Msa0087020 | Msa0606960 | 0.891961 | 2.461870e-74 | -8.615850e-47 |
| Msa0087020 | Msa1009560 | 0.803323 | 3.682321e-49 | -8.615850e-47 |
| Msa0087020 | Msa1192990 | 0.839018 | 2.035760e-57 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0087020 | MtrunA17_Chr6g0476101 | 39.024 | 246 | 145 | 3 | 150 | 394 | 48 | 289 | 1.03e-58 | 193 |
| Msa0087020 | MtrunA17_Chr3g0112101 | 35.581 | 267 | 169 | 3 | 150 | 415 | 348 | 612 | 4.39e-52 | 186 |
| Msa0087020 | MtrunA17_Chr6g0455641 | 31.298 | 262 | 166 | 3 | 150 | 404 | 222 | 476 | 7.04e-40 | 150 |
| Msa0087020 | MtrunA17_Chr6g0454041 | 31.873 | 251 | 169 | 2 | 155 | 404 | 335 | 584 | 2.54e-38 | 147 |
| Msa0087020 | MtrunA17_Chr2g0302451 | 30.970 | 268 | 178 | 4 | 150 | 413 | 454 | 718 | 1.54e-36 | 142 |
| Msa0087020 | MtrunA17_Chr6g0454051 | 28.458 | 253 | 175 | 4 | 157 | 404 | 287 | 538 | 2.08e-34 | 135 |
| Msa0087020 | MtrunA17_Chr3g0126261 | 30.859 | 256 | 173 | 4 | 160 | 413 | 177 | 430 | 7.45e-34 | 133 |
| Msa0087020 | MtrunA17_Chr6g0454061 | 27.099 | 262 | 183 | 5 | 150 | 404 | 223 | 483 | 7.16e-33 | 130 |
| Msa0087020 | MtrunA17_Chr2g0323591 | 35.922 | 103 | 61 | 3 | 15 | 114 | 21 | 121 | 2.84e-13 | 67.8 |
| Msa0087020 | MtrunA17_Chr6g0476241 | 41.772 | 79 | 44 | 2 | 36 | 113 | 24 | 101 | 8.27e-12 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0087020 | AT3G22220.3 | 36.090 | 266 | 164 | 4 | 150 | 414 | 338 | 598 | 2.96e-48 | 176 |
| Msa0087020 | AT3G22220.4 | 36.090 | 266 | 164 | 4 | 150 | 414 | 338 | 598 | 2.96e-48 | 176 |
| Msa0087020 | AT3G22220.2 | 36.090 | 266 | 164 | 4 | 150 | 414 | 338 | 598 | 2.96e-48 | 176 |
| Msa0087020 | AT3G22220.1 | 36.090 | 266 | 164 | 4 | 150 | 414 | 338 | 598 | 2.96e-48 | 176 |
| Msa0087020 | AT5G33406.1 | 41.346 | 208 | 120 | 1 | 215 | 422 | 11 | 216 | 6.00e-48 | 171 |
| Msa0087020 | AT4G15020.2 | 35.714 | 266 | 167 | 4 | 150 | 414 | 342 | 604 | 3.30e-47 | 173 |
| Msa0087020 | AT4G15020.1 | 35.714 | 266 | 167 | 4 | 150 | 414 | 342 | 604 | 3.30e-47 | 173 |
| Msa0087020 | AT3G17450.2 | 30.802 | 237 | 159 | 4 | 148 | 380 | 448 | 683 | 1.63e-37 | 145 |
| Msa0087020 | AT3G17450.1 | 30.802 | 237 | 159 | 4 | 148 | 380 | 448 | 683 | 1.63e-37 | 145 |
| Msa0087020 | AT1G79740.3 | 31.559 | 263 | 173 | 5 | 160 | 421 | 130 | 386 | 4.22e-35 | 136 |
| Msa0087020 | AT1G79740.2 | 31.559 | 263 | 173 | 5 | 160 | 421 | 130 | 386 | 4.22e-35 | 136 |
| Msa0087020 | AT1G79740.1 | 31.559 | 263 | 173 | 5 | 160 | 421 | 263 | 519 | 8.83e-35 | 137 |
| Msa0087020 | AT1G79740.4 | 31.559 | 263 | 173 | 5 | 160 | 421 | 263 | 519 | 8.83e-35 | 137 |
| Msa0087020 | AT3G13030.3 | 26.019 | 319 | 209 | 7 | 115 | 422 | 160 | 462 | 4.41e-30 | 122 |
| Msa0087020 | AT3G13030.4 | 26.019 | 319 | 209 | 7 | 115 | 422 | 160 | 462 | 4.41e-30 | 122 |
| Msa0087020 | AT3G13030.1 | 26.019 | 319 | 209 | 7 | 115 | 422 | 160 | 462 | 4.41e-30 | 122 |
| Msa0087020 | AT3G13030.2 | 26.019 | 319 | 209 | 7 | 115 | 422 | 160 | 462 | 4.41e-30 | 122 |
| Msa0087020 | AT3G13020.1 | 29.478 | 268 | 163 | 7 | 150 | 407 | 270 | 521 | 1.79e-28 | 118 |
| Msa0087020 | AT1G36095.1 | 27.881 | 269 | 144 | 6 | 55 | 273 | 29 | 297 | 1.30e-23 | 100 |
| Msa0087020 | AT3G13030.5 | 23.765 | 324 | 177 | 8 | 115 | 422 | 160 | 429 | 4.62e-21 | 95.9 |
| Msa0087020 | AT3G13010.1 | 23.887 | 247 | 174 | 7 | 159 | 404 | 252 | 485 | 1.94e-15 | 79.0 |
Find 100 sgRNAs with CRISPR-Local
Find 336 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAATCTGTTGCTTCCTCTAT+TGG | 0.169469 | 1_2:-67807281 | Msa0087020:CDS |
| TCAAGAGTGGTCAGACTTAA+AGG | 0.233829 | 1_2:-67805971 | Msa0087020:CDS |
| TTGTTCTTCAAGTCGCATTT+TGG | 0.258584 | 1_2:-67805912 | Msa0087020:CDS |
| AATCTGTTGCTTCCTCTATT+GGG | 0.309777 | 1_2:-67807280 | Msa0087020:CDS |
| TTTCATCTATAACCATTCTT+TGG | 0.337391 | 1_2:-67806124 | Msa0087020:CDS |
| TAGAAAGCTTTCTTCTTCAA+TGG | 0.342613 | 1_2:-67805578 | Msa0087020:CDS |
| TTAAATTGGCAGAAGCAATA+AGG | 0.345705 | 1_2:-67805498 | Msa0087020:CDS |
| GGATAAGTATAGGGCTAGTT+CGG | 0.346870 | 1_2:-67805527 | Msa0087020:CDS |
| AGTCTACGGGAGGAATTTCC+AGG | 0.367684 | 1_2:-67807160 | Msa0087020:CDS |
| TGATGACATCCATGCAGATT+TGG | 0.370501 | 1_2:-67805548 | Msa0087020:CDS |
| GTTACAACCTTCTTTACTCT+TGG | 0.375352 | 1_2:+67806168 | None:intergenic |
| GTTTATGCTCTTAAAGCTAT+GGG | 0.386704 | 1_2:-67805880 | Msa0087020:CDS |
| TAGTTCGGGTAACTTTAAAT+TGG | 0.394568 | 1_2:-67805512 | Msa0087020:CDS |
| GTTGAGGGAGAAGGCTGAAA+TGG | 0.395558 | 1_2:-67806091 | Msa0087020:CDS |
| CACGTGTGATTATTGTTTGT+TGG | 0.404102 | 1_2:-67807183 | Msa0087020:CDS |
| TGTTTATGCTCTTAAAGCTA+TGG | 0.411079 | 1_2:-67805881 | Msa0087020:CDS |
| TGCAGATTTGGATAAGTATA+GGG | 0.412113 | 1_2:-67805536 | Msa0087020:CDS |
| ATGCAGATTTGGATAAGTAT+AGG | 0.415922 | 1_2:-67805537 | Msa0087020:CDS |
| GATGGAAGTATAACAGTGTA+AGG | 0.417281 | 1_2:-67807229 | Msa0087020:CDS |
| GATTTAATGCTAGAAAAGAT+TGG | 0.417475 | 1_2:-67806198 | Msa0087020:CDS |
| TTGAGATTGTTGACAGGAGG+TGG | 0.418360 | 1_2:-67805720 | Msa0087020:CDS |
| GACTGAAATGGAGAGTCTTC+CGG | 0.425050 | 1_2:-67806940 | Msa0087020:CDS |
| TTATTGTTTGTTGGAGTCTA+CGG | 0.429758 | 1_2:-67807174 | Msa0087020:CDS |
| CAGGGCCAAACAAAATCAAA+TGG | 0.435077 | 1_2:-67807141 | Msa0087020:CDS |
| GATAAGTATAGGGCTAGTTC+GGG | 0.441052 | 1_2:-67805526 | Msa0087020:CDS |
| ATCAAGCAATGGTGGGAGTA+AGG | 0.451264 | 1_2:-67805795 | Msa0087020:CDS |
| GAAGGTTGGTAAGTGGGAAA+AGG | 0.452327 | 1_2:-67806968 | Msa0087020:CDS |
| TGTTGCTTCCTCTATTGGGC+TGG | 0.453869 | 1_2:-67807276 | Msa0087020:CDS |
| CAAAATCAAATGGGAGTGAC+AGG | 0.455222 | 1_2:-67807131 | Msa0087020:CDS |
| CATCATCCGTTGCATGCAGC+TGG | 0.456532 | 1_2:-67805685 | Msa0087020:CDS |
| TCACCGGCATTAGAAGATAA+TGG | 0.457229 | 1_2:+67807317 | None:intergenic |
| AAGGTTGGTAAGTGGGAAAA+GGG | 0.459998 | 1_2:-67806967 | Msa0087020:CDS |
| ATCTTGAGCCTCATTTGAAA+CGG | 0.462692 | 1_2:+67807022 | None:intergenic |
| GCAGCACGACTTCAAGAGAT+TGG | 0.466842 | 1_2:-67806990 | Msa0087020:CDS |
| GAGTCTTCCGGCCACTAAGA+AGG | 0.470821 | 1_2:-67806928 | Msa0087020:CDS |
| AGAAGTTGCCTTCTTACCCT+TGG | 0.474519 | 1_2:+67805936 | None:intergenic |
| AGCCTAAGTACTCTTATAAG+AGG | 0.478383 | 1_2:+67805856 | None:intergenic |
| TGGTTTGACCAGCCCAATAG+AGG | 0.478495 | 1_2:+67807268 | None:intergenic |
| GGATTGTTATAAAAGTGCTT+CGG | 0.481643 | 1_2:+67805649 | None:intergenic |
| TATTGTTTGTTGGAGTCTAC+GGG | 0.483113 | 1_2:-67807173 | Msa0087020:CDS |
| CAAACTTTCTTCAATTGCAA+AGG | 0.488401 | 1_2:-67806035 | Msa0087020:CDS |
| CATCCTATGTCAGGAAGGGT+TGG | 0.491956 | 1_2:+67807248 | None:intergenic |
| GAAAAGGGCAAGGACTGAAA+TGG | 0.492542 | 1_2:-67806952 | Msa0087020:CDS |
| ACACAAGGAATTAGTCTTGT+CGG | 0.492872 | 1_2:-67806147 | Msa0087020:CDS |
| CGAAATAGTAGTCACTTACC+AGG | 0.504939 | 1_2:+67805451 | None:intergenic |
| TTATACTTCCATCCTATGTC+AGG | 0.505546 | 1_2:+67807239 | None:intergenic |
| AGATTGGAAGGTTGGTAAGT+GGG | 0.515155 | 1_2:-67806974 | Msa0087020:CDS |
| ACTTCAAGAGATTGGAAGGT+TGG | 0.517951 | 1_2:-67806982 | Msa0087020:CDS |
| GAGGATACGCGTACATCTCC+TGG | 0.518363 | 1_2:-67805469 | Msa0087020:CDS |
| CTGTCAACAATCTCAAGGAT+TGG | 0.518832 | 1_2:+67805727 | None:intergenic |
| ACTAAGAAGGGTAATACAAA+AGG | 0.520152 | 1_2:-67806915 | Msa0087020:intron |
| TTTGAATTTGTTGAGGGAGA+AGG | 0.521056 | 1_2:-67806100 | Msa0087020:CDS |
| GGTGAAATCCGTTTCAAATG+AGG | 0.523303 | 1_2:-67807030 | Msa0087020:CDS |
| ACAAATTCAAAACCAAAGAA+TGG | 0.528552 | 1_2:+67806112 | None:intergenic |
| TGATATATGAAACTCATAGC+AGG | 0.529944 | 1_2:+67805814 | None:intergenic |
| TAAAGCTTGCTTAACGACAC+TGG | 0.531131 | 1_2:-67807102 | Msa0087020:CDS |
| GTATTACCCTTCTTAGTGGC+CGG | 0.542772 | 1_2:+67806921 | None:intergenic |
| TGACGAAGCCAAGGGTAAGA+AGG | 0.542807 | 1_2:-67805944 | Msa0087020:CDS |
| TCCTTGAGATTGTTGACAGG+AGG | 0.550735 | 1_2:-67805723 | Msa0087020:CDS |
| AAACCAACCCTTCCTGACAT+AGG | 0.551809 | 1_2:-67807251 | Msa0087020:CDS |
| TTTCATATATCAAGCAATGG+TGG | 0.551820 | 1_2:-67805803 | Msa0087020:CDS |
| AAAGGTGAGTGACGAAGCCA+AGG | 0.551906 | 1_2:-67805953 | Msa0087020:CDS |
| CACGACTTCAAGAGATTGGA+AGG | 0.552643 | 1_2:-67806986 | Msa0087020:CDS |
| CAACCCTTCCTGACATAGGA+TGG | 0.554812 | 1_2:-67807247 | Msa0087020:CDS |
| TTCATATATCAAGCAATGGT+GGG | 0.555106 | 1_2:-67805802 | Msa0087020:CDS |
| GAGATTGGAAGGTTGGTAAG+TGG | 0.556292 | 1_2:-67806975 | Msa0087020:CDS |
| AGGGCCAAACAAAATCAAAT+GGG | 0.560257 | 1_2:-67807140 | Msa0087020:CDS |
| AGTCTTCCGGCCACTAAGAA+GGG | 0.561768 | 1_2:-67806927 | Msa0087020:CDS |
| TGAGATTGTTGACAGGAGGT+GGG | 0.563133 | 1_2:-67805719 | Msa0087020:CDS |
| GCACCATTATCTTCTAATGC+CGG | 0.566676 | 1_2:-67807320 | Msa0087020:CDS |
| AGCTAATGAGGAAGCTAGAG+TGG | 0.569343 | 1_2:-67807057 | Msa0087020:CDS |
| CAATCCTTGAGATTGTTGAC+AGG | 0.573892 | 1_2:-67805726 | Msa0087020:CDS |
| TGAGGAAGCTAGAGTGGCAA+AGG | 0.574189 | 1_2:-67807051 | Msa0087020:CDS |
| CCACTCTTGAGAAGTGAACA+TGG | 0.582860 | 1_2:+67805984 | None:intergenic |
| TCTTATAAGAGTACTTAGGC+TGG | 0.583735 | 1_2:-67805854 | Msa0087020:CDS |
| ACCTCCTGTCAACAATCTCA+AGG | 0.585500 | 1_2:+67805722 | None:intergenic |
| TATACTTATCCAAATCTGCA+TGG | 0.585773 | 1_2:+67805539 | None:intergenic |
| ACTTCCATCCTATGTCAGGA+AGG | 0.587027 | 1_2:+67807243 | None:intergenic |
| CTTCCATCCTATGTCAGGAA+GGG | 0.587261 | 1_2:+67807244 | None:intergenic |
| TCTATACAATGTGCTGCACA+TGG | 0.597200 | 1_2:+67806219 | None:intergenic |
| TTGTGCAGCAGAAGAATCAC+CGG | 0.597962 | 1_2:+67807301 | None:intergenic |
| TGGTAAGTGGGAAAAGGGCA+AGG | 0.600199 | 1_2:-67806962 | Msa0087020:CDS |
| TGAGGCTCAAGATGATGAAG+AGG | 0.609931 | 1_2:-67807012 | Msa0087020:CDS |
| AAATGTCCAGCTGCATGCAA+CGG | 0.610121 | 1_2:+67805679 | None:intergenic |
| TGATTAGACATGGAGTCACA+AGG | 0.610919 | 1_2:-67806065 | Msa0087020:CDS |
| TTGCTTAACGACACTGGAGG+AGG | 0.611100 | 1_2:-67807096 | Msa0087020:CDS |
| GATATATGAAACTCATAGCA+GGG | 0.619541 | 1_2:+67805815 | None:intergenic |
| ATGGAAGTATAACAGTGTAA+GGG | 0.622725 | 1_2:-67807228 | Msa0087020:CDS |
| GAGATTGTTGACAGGAGGTG+GGG | 0.629952 | 1_2:-67805718 | Msa0087020:CDS |
| CCATGTTCACTTCTCAAGAG+TGG | 0.631953 | 1_2:-67805984 | Msa0087020:CDS |
| GAGTTTCATATATCAAGCAA+TGG | 0.636888 | 1_2:-67805806 | Msa0087020:CDS |
| TTTATGCTCTTAAAGCTATG+GGG | 0.638889 | 1_2:-67805879 | Msa0087020:CDS |
| GAAATGGAGTTGATTAGACA+TGG | 0.642103 | 1_2:-67806075 | Msa0087020:CDS |
| GTCTACGGGAGGAATTTCCA+GGG | 0.658920 | 1_2:-67807159 | Msa0087020:CDS |
| GGCCTCTTATAAGAGTACTT+AGG | 0.659644 | 1_2:-67805858 | Msa0087020:CDS |
| GTAAAGAAGGTTGTAACACA+AGG | 0.668251 | 1_2:-67806162 | Msa0087020:CDS |
| TGTTTGTTGGAGTCTACGGG+AGG | 0.672619 | 1_2:-67807170 | Msa0087020:CDS |
| AGAAGCAATAAGGCACAGAG+AGG | 0.676918 | 1_2:-67805488 | Msa0087020:CDS |
| AAGGTGAGTGACGAAGCCAA+GGG | 0.690496 | 1_2:-67805952 | Msa0087020:CDS |
| AGCTTGCTTAACGACACTGG+AGG | 0.743395 | 1_2:-67807099 | Msa0087020:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATCAAATTAAGAAAAAATT+TGG | - | chr1_2:67807031-67807050 | Msa0087020:CDS | 10.0% |
| !! | AATCAAATTAAGAAAAAATT+TGG | - | chr1_2:67807031-67807050 | Msa0087020:CDS | 10.0% |
| !!! | TTGGAAAAATATTTTTGTAA+AGG | - | chr1_2:67806521-67806540 | Msa0087020:intron | 15.0% |
| !!! | TTGGAAAAATATTTTTGTAA+AGG | - | chr1_2:67806521-67806540 | Msa0087020:intron | 15.0% |
| !! | TAAAAGAACATTAAATCCAA+TGG | + | chr1_2:67805915-67805934 | None:intergenic | 20.0% |
| !! | AAGTATTAAAGATAGAGATA+AGG | - | chr1_2:67805971-67805990 | Msa0087020:CDS | 20.0% |
| !! | ATCAAAAAGTTTCAAATTGA+TGG | - | chr1_2:67806067-67806086 | Msa0087020:CDS | 20.0% |
| !!! | AAAAGCAATTTTTGATATGT+TGG | - | chr1_2:67806352-67806371 | Msa0087020:intron | 20.0% |
| !! | GTAATAATACATGATATGTT+TGG | + | chr1_2:67806488-67806507 | None:intergenic | 20.0% |
| !! | TATTACGTTCTTTAATTGTT+TGG | - | chr1_2:67806502-67806521 | Msa0087020:intron | 20.0% |
| !! | TAAAAGAACATTAAATCCAA+TGG | + | chr1_2:67805915-67805934 | None:intergenic | 20.0% |
| !! | AAGTATTAAAGATAGAGATA+AGG | - | chr1_2:67805971-67805990 | Msa0087020:CDS | 20.0% |
| !! | ATCAAAAAGTTTCAAATTGA+TGG | - | chr1_2:67806067-67806086 | Msa0087020:CDS | 20.0% |
| !!! | AAAAGCAATTTTTGATATGT+TGG | - | chr1_2:67806352-67806371 | Msa0087020:intron | 20.0% |
| !! | GTAATAATACATGATATGTT+TGG | + | chr1_2:67806488-67806507 | None:intergenic | 20.0% |
| !! | TATTACGTTCTTTAATTGTT+TGG | - | chr1_2:67806502-67806521 | Msa0087020:intron | 20.0% |
| !!! | ATTGATTTTAAGAGCTAATG+AGG | - | chr1_2:67805734-67805753 | Msa0087020:CDS | 25.0% |
| ! | AAAAAAAGCGAGTTATATAC+TGG | + | chr1_2:67806016-67806035 | None:intergenic | 25.0% |
| !!! | ACTCGCTTTTTTTATCTAAA+TGG | - | chr1_2:67806023-67806042 | Msa0087020:CDS | 25.0% |
| !! | AAATTGATGGTTGAAGAAAT+TGG | - | chr1_2:67806080-67806099 | Msa0087020:CDS | 25.0% |
| ! | GGATAATACTAATCAAATGT+TGG | - | chr1_2:67806172-67806191 | Msa0087020:CDS | 25.0% |
| !!! | CATATCAAAAATTGCTTTTC+CGG | + | chr1_2:67806351-67806370 | None:intergenic | 25.0% |
| !! | ATATGTTGGATGAATTTGTT+GGG | - | chr1_2:67806366-67806385 | Msa0087020:intron | 25.0% |
| ! | GATTTAATGCTAGAAAAGAT+TGG | - | chr1_2:67806605-67806624 | Msa0087020:intron | 25.0% |
| ! | AAAAATTCCAAGAGTAAAGA+AGG | - | chr1_2:67806628-67806647 | Msa0087020:intron | 25.0% |
| ! | TTTCATCTATAACCATTCTT+TGG | - | chr1_2:67806679-67806698 | Msa0087020:intron | 25.0% |
| ! | ACAAATTCAAAACCAAAGAA+TGG | + | chr1_2:67806694-67806713 | None:intergenic | 25.0% |
| !!! | TTTGGTTTTGAATTTGTTGA+GGG | - | chr1_2:67806697-67806716 | Msa0087020:intron | 25.0% |
| !!! | TGGTTCTAATTTTTTGTCTT+AGG | + | chr1_2:67806802-67806821 | None:intergenic | 25.0% |
| ! | AGATAAAAATGATGCGTTAT+TGG | - | chr1_2:67807183-67807202 | Msa0087020:CDS | 25.0% |
| !!! | ATTGATTTTAAGAGCTAATG+AGG | - | chr1_2:67805734-67805753 | Msa0087020:CDS | 25.0% |
| ! | AAAAAAAGCGAGTTATATAC+TGG | + | chr1_2:67806016-67806035 | None:intergenic | 25.0% |
| !!! | ACTCGCTTTTTTTATCTAAA+TGG | - | chr1_2:67806023-67806042 | Msa0087020:CDS | 25.0% |
| !! | AAATTGATGGTTGAAGAAAT+TGG | - | chr1_2:67806080-67806099 | Msa0087020:CDS | 25.0% |
| ! | GGATAATACTAATCAAATGT+TGG | - | chr1_2:67806172-67806191 | Msa0087020:CDS | 25.0% |
| !!! | CATATCAAAAATTGCTTTTC+CGG | + | chr1_2:67806351-67806370 | None:intergenic | 25.0% |
| !! | ATATGTTGGATGAATTTGTT+GGG | - | chr1_2:67806366-67806385 | Msa0087020:intron | 25.0% |
| ! | GATTTAATGCTAGAAAAGAT+TGG | - | chr1_2:67806605-67806624 | Msa0087020:intron | 25.0% |
| ! | AAAAATTCCAAGAGTAAAGA+AGG | - | chr1_2:67806628-67806647 | Msa0087020:intron | 25.0% |
| ! | TTTCATCTATAACCATTCTT+TGG | - | chr1_2:67806679-67806698 | Msa0087020:intron | 25.0% |
| ! | ACAAATTCAAAACCAAAGAA+TGG | + | chr1_2:67806694-67806713 | None:intergenic | 25.0% |
| !!! | TTTGGTTTTGAATTTGTTGA+GGG | - | chr1_2:67806697-67806716 | Msa0087020:intron | 25.0% |
| !!! | TGGTTCTAATTTTTTGTCTT+AGG | + | chr1_2:67806802-67806821 | None:intergenic | 25.0% |
| ! | AGATAAAAATGATGCGTTAT+TGG | - | chr1_2:67807183-67807202 | Msa0087020:CDS | 25.0% |
| ! | ATGGAAGTATAACAGTGTAA+GGG | - | chr1_2:67805575-67805594 | Msa0087020:CDS | 30.0% |
| ! | TTATTGTTTGTTGGAGTCTA+CGG | - | chr1_2:67805629-67805648 | Msa0087020:CDS | 30.0% |
| ! | TTTTGTATTACCCTTCTTAG+TGG | + | chr1_2:67805889-67805908 | None:intergenic | 30.0% |
| ACTAAGAAGGGTAATACAAA+AGG | - | chr1_2:67805888-67805907 | Msa0087020:CDS | 30.0% | |
| ! | AATGTTCTTTTAAACACCTG+AGG | - | chr1_2:67805923-67805942 | Msa0087020:CDS | 30.0% |
| GTTGAAGAAATTGGTCAATA+TGG | - | chr1_2:67806089-67806108 | Msa0087020:CDS | 30.0% | |
| GATATGTTGGATGAATTTGT+TGG | - | chr1_2:67806365-67806384 | Msa0087020:intron | 30.0% | |
| !! | TATGTTGGATGAATTTGTTG+GGG | - | chr1_2:67806367-67806386 | Msa0087020:intron | 30.0% |
| !!! | CTTTGGTTTTGAATTTGTTG+AGG | - | chr1_2:67806696-67806715 | Msa0087020:intron | 30.0% |
| CAAACTTTCTTCAATTGCAA+AGG | - | chr1_2:67806768-67806787 | Msa0087020:intron | 30.0% | |
| TGTTTATGCTCTTAAAGCTA+TGG | - | chr1_2:67806922-67806941 | Msa0087020:CDS | 30.0% | |
| GTTTATGCTCTTAAAGCTAT+GGG | - | chr1_2:67806923-67806942 | Msa0087020:CDS | 30.0% | |
| TTTATGCTCTTAAAGCTATG+GGG | - | chr1_2:67806924-67806943 | Msa0087020:CDS | 30.0% | |
| GATATATGAAACTCATAGCA+GGG | + | chr1_2:67806991-67807010 | None:intergenic | 30.0% | |
| TGATATATGAAACTCATAGC+AGG | + | chr1_2:67806992-67807011 | None:intergenic | 30.0% | |
| GAGTTTCATATATCAAGCAA+TGG | - | chr1_2:67806997-67807016 | Msa0087020:CDS | 30.0% | |
| TTTCATATATCAAGCAATGG+TGG | - | chr1_2:67807000-67807019 | Msa0087020:CDS | 30.0% | |
| TTCATATATCAAGCAATGGT+GGG | - | chr1_2:67807001-67807020 | Msa0087020:CDS | 30.0% | |
| !! | GGATTGTTATAAAAGTGCTT+CGG | + | chr1_2:67807157-67807176 | None:intergenic | 30.0% |
| !! | GCATCATTTTTATCTATTGC+TGG | + | chr1_2:67807178-67807197 | None:intergenic | 30.0% |
| AAAAATGATGCGTTATTGGA+TGG | - | chr1_2:67807187-67807206 | Msa0087020:CDS | 30.0% | |
| TAGAAAGCTTTCTTCTTCAA+TGG | - | chr1_2:67807225-67807244 | Msa0087020:CDS | 30.0% | |
| TATACTTATCCAAATCTGCA+TGG | + | chr1_2:67807267-67807286 | None:intergenic | 30.0% | |
| ATGCAGATTTGGATAAGTAT+AGG | - | chr1_2:67807266-67807285 | Msa0087020:CDS | 30.0% | |
| TGCAGATTTGGATAAGTATA+GGG | - | chr1_2:67807267-67807286 | Msa0087020:CDS | 30.0% | |
| TAGTTCGGGTAACTTTAAAT+TGG | - | chr1_2:67807291-67807310 | Msa0087020:CDS | 30.0% | |
| TTAAATTGGCAGAAGCAATA+AGG | - | chr1_2:67807305-67807324 | Msa0087020:CDS | 30.0% | |
| ! | ATGGAAGTATAACAGTGTAA+GGG | - | chr1_2:67805575-67805594 | Msa0087020:CDS | 30.0% |
| ! | TTATTGTTTGTTGGAGTCTA+CGG | - | chr1_2:67805629-67805648 | Msa0087020:CDS | 30.0% |
| ! | TTTTGTATTACCCTTCTTAG+TGG | + | chr1_2:67805889-67805908 | None:intergenic | 30.0% |
| ACTAAGAAGGGTAATACAAA+AGG | - | chr1_2:67805888-67805907 | Msa0087020:CDS | 30.0% | |
| ! | AATGTTCTTTTAAACACCTG+AGG | - | chr1_2:67805923-67805942 | Msa0087020:CDS | 30.0% |
| GTTGAAGAAATTGGTCAATA+TGG | - | chr1_2:67806089-67806108 | Msa0087020:CDS | 30.0% | |
| GATATGTTGGATGAATTTGT+TGG | - | chr1_2:67806365-67806384 | Msa0087020:intron | 30.0% | |
| !! | TATGTTGGATGAATTTGTTG+GGG | - | chr1_2:67806367-67806386 | Msa0087020:intron | 30.0% |
| !!! | CTTTGGTTTTGAATTTGTTG+AGG | - | chr1_2:67806696-67806715 | Msa0087020:intron | 30.0% |
| CAAACTTTCTTCAATTGCAA+AGG | - | chr1_2:67806768-67806787 | Msa0087020:intron | 30.0% | |
| TGTTTATGCTCTTAAAGCTA+TGG | - | chr1_2:67806922-67806941 | Msa0087020:CDS | 30.0% | |
| GTTTATGCTCTTAAAGCTAT+GGG | - | chr1_2:67806923-67806942 | Msa0087020:CDS | 30.0% | |
| TTTATGCTCTTAAAGCTATG+GGG | - | chr1_2:67806924-67806943 | Msa0087020:CDS | 30.0% | |
| GATATATGAAACTCATAGCA+GGG | + | chr1_2:67806991-67807010 | None:intergenic | 30.0% | |
| TGATATATGAAACTCATAGC+AGG | + | chr1_2:67806992-67807011 | None:intergenic | 30.0% | |
| GAGTTTCATATATCAAGCAA+TGG | - | chr1_2:67806997-67807016 | Msa0087020:CDS | 30.0% | |
| TTTCATATATCAAGCAATGG+TGG | - | chr1_2:67807000-67807019 | Msa0087020:CDS | 30.0% | |
| TTCATATATCAAGCAATGGT+GGG | - | chr1_2:67807001-67807020 | Msa0087020:CDS | 30.0% | |
| !! | GGATTGTTATAAAAGTGCTT+CGG | + | chr1_2:67807157-67807176 | None:intergenic | 30.0% |
| !! | GCATCATTTTTATCTATTGC+TGG | + | chr1_2:67807178-67807197 | None:intergenic | 30.0% |
| AAAAATGATGCGTTATTGGA+TGG | - | chr1_2:67807187-67807206 | Msa0087020:CDS | 30.0% | |
| TAGAAAGCTTTCTTCTTCAA+TGG | - | chr1_2:67807225-67807244 | Msa0087020:CDS | 30.0% | |
| TATACTTATCCAAATCTGCA+TGG | + | chr1_2:67807267-67807286 | None:intergenic | 30.0% | |
| ATGCAGATTTGGATAAGTAT+AGG | - | chr1_2:67807266-67807285 | Msa0087020:CDS | 30.0% | |
| TGCAGATTTGGATAAGTATA+GGG | - | chr1_2:67807267-67807286 | Msa0087020:CDS | 30.0% | |
| TAGTTCGGGTAACTTTAAAT+TGG | - | chr1_2:67807291-67807310 | Msa0087020:CDS | 30.0% | |
| TTAAATTGGCAGAAGCAATA+AGG | - | chr1_2:67807305-67807324 | Msa0087020:CDS | 30.0% | |
| ! | AATCTGTTGCTTCCTCTATT+GGG | - | chr1_2:67805523-67805542 | Msa0087020:CDS | 35.0% |
| TTATACTTCCATCCTATGTC+AGG | + | chr1_2:67805567-67805586 | None:intergenic | 35.0% | |
| ! | GATGGAAGTATAACAGTGTA+AGG | - | chr1_2:67805574-67805593 | Msa0087020:CDS | 35.0% |
| CACGTGTGATTATTGTTTGT+TGG | - | chr1_2:67805620-67805639 | Msa0087020:CDS | 35.0% | |
| ! | TATTGTTTGTTGGAGTCTAC+GGG | - | chr1_2:67805630-67805649 | Msa0087020:CDS | 35.0% |
| AGGGCCAAACAAAATCAAAT+GGG | - | chr1_2:67805663-67805682 | Msa0087020:CDS | 35.0% | |
| !! | CACTCCCATTTGATTTTGTT+TGG | + | chr1_2:67805670-67805689 | None:intergenic | 35.0% |
| ATCTTGAGCCTCATTTGAAA+CGG | + | chr1_2:67805784-67805803 | None:intergenic | 35.0% | |
| TTTCTCAACTCATGATAGGA+AGG | + | chr1_2:67806131-67806150 | None:intergenic | 35.0% | |
| CCAACTCTTTGTTAAGACAT+GGG | + | chr1_2:67806154-67806173 | None:intergenic | 35.0% | |
| TCCAACTCTTTGTTAAGACA+TGG | + | chr1_2:67806155-67806174 | None:intergenic | 35.0% | |
| TCAAATGTTGGAGACTAACA+AGG | - | chr1_2:67806184-67806203 | Msa0087020:CDS | 35.0% | |
| CAATGTTCTTCCCTTTGTAT+CGG | + | chr1_2:67806255-67806274 | None:intergenic | 35.0% | |
| TTAATAAACATAGTGCCTGG+CGG | + | chr1_2:67806299-67806318 | None:intergenic | 35.0% | |
| CTCTTAATAAACATAGTGCC+TGG | + | chr1_2:67806302-67806321 | None:intergenic | 35.0% | |
| GAAGAAAGTAGAAACCTTAC+CGG | + | chr1_2:67806453-67806472 | None:intergenic | 35.0% | |
| ! | CATGGAGTCCAAAAGATTTT+TGG | + | chr1_2:67806569-67806588 | None:intergenic | 35.0% |
| GTTACAACCTTCTTTACTCT+TGG | + | chr1_2:67806638-67806657 | None:intergenic | 35.0% | |
| GTAAAGAAGGTTGTAACACA+AGG | - | chr1_2:67806641-67806660 | Msa0087020:intron | 35.0% | |
| !! | ACACAAGGAATTAGTCTTGT+CGG | - | chr1_2:67806656-67806675 | Msa0087020:intron | 35.0% |
| !! | TTTGAATTTGTTGAGGGAGA+AGG | - | chr1_2:67806703-67806722 | Msa0087020:intron | 35.0% |
| ! | GAAATGGAGTTGATTAGACA+TGG | - | chr1_2:67806728-67806747 | Msa0087020:intron | 35.0% |
| ! | TTGTTCTTCAAGTCGCATTT+TGG | - | chr1_2:67806891-67806910 | Msa0087020:intron | 35.0% |
| ! | TGTTCTTCAAGTCGCATTTT+GGG | - | chr1_2:67806892-67806911 | Msa0087020:intron | 35.0% |
| AGCCTAAGTACTCTTATAAG+AGG | + | chr1_2:67806950-67806969 | None:intergenic | 35.0% | |
| !! | TCTTATAAGAGTACTTAGGC+TGG | - | chr1_2:67806949-67806968 | Msa0087020:CDS | 35.0% |
| ! | AATCTGTTGCTTCCTCTATT+GGG | - | chr1_2:67805523-67805542 | Msa0087020:CDS | 35.0% |
| TTATACTTCCATCCTATGTC+AGG | + | chr1_2:67805567-67805586 | None:intergenic | 35.0% | |
| ! | GATGGAAGTATAACAGTGTA+AGG | - | chr1_2:67805574-67805593 | Msa0087020:CDS | 35.0% |
| CACGTGTGATTATTGTTTGT+TGG | - | chr1_2:67805620-67805639 | Msa0087020:CDS | 35.0% | |
| ! | TATTGTTTGTTGGAGTCTAC+GGG | - | chr1_2:67805630-67805649 | Msa0087020:CDS | 35.0% |
| AGGGCCAAACAAAATCAAAT+GGG | - | chr1_2:67805663-67805682 | Msa0087020:CDS | 35.0% | |
| !! | CACTCCCATTTGATTTTGTT+TGG | + | chr1_2:67805670-67805689 | None:intergenic | 35.0% |
| ATCTTGAGCCTCATTTGAAA+CGG | + | chr1_2:67805784-67805803 | None:intergenic | 35.0% | |
| TTTCTCAACTCATGATAGGA+AGG | + | chr1_2:67806131-67806150 | None:intergenic | 35.0% | |
| CCAACTCTTTGTTAAGACAT+GGG | + | chr1_2:67806154-67806173 | None:intergenic | 35.0% | |
| TCCAACTCTTTGTTAAGACA+TGG | + | chr1_2:67806155-67806174 | None:intergenic | 35.0% | |
| TCAAATGTTGGAGACTAACA+AGG | - | chr1_2:67806184-67806203 | Msa0087020:CDS | 35.0% | |
| CAATGTTCTTCCCTTTGTAT+CGG | + | chr1_2:67806255-67806274 | None:intergenic | 35.0% | |
| TTAATAAACATAGTGCCTGG+CGG | + | chr1_2:67806299-67806318 | None:intergenic | 35.0% | |
| CTCTTAATAAACATAGTGCC+TGG | + | chr1_2:67806302-67806321 | None:intergenic | 35.0% | |
| GAAGAAAGTAGAAACCTTAC+CGG | + | chr1_2:67806453-67806472 | None:intergenic | 35.0% | |
| ! | CATGGAGTCCAAAAGATTTT+TGG | + | chr1_2:67806569-67806588 | None:intergenic | 35.0% |
| GTTACAACCTTCTTTACTCT+TGG | + | chr1_2:67806638-67806657 | None:intergenic | 35.0% | |
| GTAAAGAAGGTTGTAACACA+AGG | - | chr1_2:67806641-67806660 | Msa0087020:intron | 35.0% | |
| !! | ACACAAGGAATTAGTCTTGT+CGG | - | chr1_2:67806656-67806675 | Msa0087020:intron | 35.0% |
| !! | TTTGAATTTGTTGAGGGAGA+AGG | - | chr1_2:67806703-67806722 | Msa0087020:intron | 35.0% |
| ! | GAAATGGAGTTGATTAGACA+TGG | - | chr1_2:67806728-67806747 | Msa0087020:intron | 35.0% |
| ! | TTGTTCTTCAAGTCGCATTT+TGG | - | chr1_2:67806891-67806910 | Msa0087020:intron | 35.0% |
| ! | TGTTCTTCAAGTCGCATTTT+GGG | - | chr1_2:67806892-67806911 | Msa0087020:intron | 35.0% |
| AGCCTAAGTACTCTTATAAG+AGG | + | chr1_2:67806950-67806969 | None:intergenic | 35.0% | |
| !! | TCTTATAAGAGTACTTAGGC+TGG | - | chr1_2:67806949-67806968 | Msa0087020:CDS | 35.0% |
| GCACCATTATCTTCTAATGC+CGG | - | chr1_2:67805483-67805502 | Msa0087020:CDS | 40.0% | |
| TCACCGGCATTAGAAGATAA+TGG | + | chr1_2:67805489-67805508 | None:intergenic | 40.0% | |
| ! | CAATCTGTTGCTTCCTCTAT+TGG | - | chr1_2:67805522-67805541 | Msa0087020:CDS | 40.0% |
| !! | CATTTGATTTTGTTTGGCCC+TGG | + | chr1_2:67805664-67805683 | None:intergenic | 40.0% |
| CAGGGCCAAACAAAATCAAA+TGG | - | chr1_2:67805662-67805681 | Msa0087020:CDS | 40.0% | |
| CAAAATCAAATGGGAGTGAC+AGG | - | chr1_2:67805672-67805691 | Msa0087020:CDS | 40.0% | |
| ! | TAAAGCTTGCTTAACGACAC+TGG | - | chr1_2:67805701-67805720 | Msa0087020:CDS | 40.0% |
| GGTGAAATCCGTTTCAAATG+AGG | - | chr1_2:67805773-67805792 | Msa0087020:CDS | 40.0% | |
| ACTTCAAGAGATTGGAAGGT+TGG | - | chr1_2:67805821-67805840 | Msa0087020:CDS | 40.0% | |
| !! | AGATTGGAAGGTTGGTAAGT+GGG | - | chr1_2:67805829-67805848 | Msa0087020:CDS | 40.0% |
| !! | AAGGTTGGTAAGTGGGAAAA+GGG | - | chr1_2:67805836-67805855 | Msa0087020:CDS | 40.0% |
| GGGTAATACAAAAGGTCCAT+TGG | - | chr1_2:67805896-67805915 | Msa0087020:CDS | 40.0% | |
| TTAAACACCTGAGGCAACAT+TGG | - | chr1_2:67805932-67805951 | Msa0087020:CDS | 40.0% | |
| TAAACACCTGAGGCAACATT+GGG | - | chr1_2:67805933-67805952 | Msa0087020:CDS | 40.0% | |
| TGGGTTTCTCAACTCATGAT+AGG | + | chr1_2:67806135-67806154 | None:intergenic | 40.0% | |
| CCCATGTCTTAACAAAGAGT+TGG | - | chr1_2:67806151-67806170 | Msa0087020:CDS | 40.0% | |
| AATGTTGGAGACTAACAAGG+CGG | - | chr1_2:67806187-67806206 | Msa0087020:CDS | 40.0% | |
| GGTTGTTCAATAATGTCCGA+TGG | - | chr1_2:67806224-67806243 | Msa0087020:CDS | 40.0% | |
| GTTCAATAATGTCCGATGGT+TGG | - | chr1_2:67806228-67806247 | Msa0087020:CDS | 40.0% | |
| ! | TTTTTAATCAACTCTCCGCC+AGG | - | chr1_2:67806281-67806300 | Msa0087020:intron | 40.0% |
| ! | TTTTCCGGTTTTCACTTCTG+AGG | + | chr1_2:67806336-67806355 | None:intergenic | 40.0% |
| !! | GATGAATTTGTTGGGGAGAT+TGG | - | chr1_2:67806374-67806393 | Msa0087020:intron | 40.0% |
| CTTACCGGCCAAAACATAAT+TGG | + | chr1_2:67806438-67806457 | None:intergenic | 40.0% | |
| !!! | CAATTATGTTTTGGCCGGTA+AGG | - | chr1_2:67806436-67806455 | Msa0087020:intron | 40.0% |
| ! | CAGCGAGACCAAAAATCTTT+TGG | - | chr1_2:67806558-67806577 | Msa0087020:intron | 40.0% |
| TCTATACAATGTGCTGCACA+TGG | + | chr1_2:67806587-67806606 | None:intergenic | 40.0% | |
| TGATTAGACATGGAGTCACA+AGG | - | chr1_2:67806738-67806757 | Msa0087020:intron | 40.0% | |
| TCAAGAGTGGTCAGACTTAA+AGG | - | chr1_2:67806832-67806851 | Msa0087020:intron | 40.0% | |
| !! | GGCCTCTTATAAGAGTACTT+AGG | - | chr1_2:67806945-67806964 | Msa0087020:CDS | 40.0% |
| CTGTCAACAATCTCAAGGAT+TGG | + | chr1_2:67807079-67807098 | None:intergenic | 40.0% | |
| CAATCCTTGAGATTGTTGAC+AGG | - | chr1_2:67807077-67807096 | Msa0087020:CDS | 40.0% | |
| TGATGACATCCATGCAGATT+TGG | - | chr1_2:67807255-67807274 | Msa0087020:CDS | 40.0% | |
| !! | GGATAAGTATAGGGCTAGTT+CGG | - | chr1_2:67807276-67807295 | Msa0087020:CDS | 40.0% |
| !! | GATAAGTATAGGGCTAGTTC+GGG | - | chr1_2:67807277-67807296 | Msa0087020:CDS | 40.0% |
| GCACCATTATCTTCTAATGC+CGG | - | chr1_2:67805483-67805502 | Msa0087020:CDS | 40.0% | |
| TCACCGGCATTAGAAGATAA+TGG | + | chr1_2:67805489-67805508 | None:intergenic | 40.0% | |
| ! | CAATCTGTTGCTTCCTCTAT+TGG | - | chr1_2:67805522-67805541 | Msa0087020:CDS | 40.0% |
| !! | CATTTGATTTTGTTTGGCCC+TGG | + | chr1_2:67805664-67805683 | None:intergenic | 40.0% |
| CAGGGCCAAACAAAATCAAA+TGG | - | chr1_2:67805662-67805681 | Msa0087020:CDS | 40.0% | |
| CAAAATCAAATGGGAGTGAC+AGG | - | chr1_2:67805672-67805691 | Msa0087020:CDS | 40.0% | |
| ! | TAAAGCTTGCTTAACGACAC+TGG | - | chr1_2:67805701-67805720 | Msa0087020:CDS | 40.0% |
| GGTGAAATCCGTTTCAAATG+AGG | - | chr1_2:67805773-67805792 | Msa0087020:CDS | 40.0% | |
| ACTTCAAGAGATTGGAAGGT+TGG | - | chr1_2:67805821-67805840 | Msa0087020:CDS | 40.0% | |
| !! | AGATTGGAAGGTTGGTAAGT+GGG | - | chr1_2:67805829-67805848 | Msa0087020:CDS | 40.0% |
| !! | AAGGTTGGTAAGTGGGAAAA+GGG | - | chr1_2:67805836-67805855 | Msa0087020:CDS | 40.0% |
| GGGTAATACAAAAGGTCCAT+TGG | - | chr1_2:67805896-67805915 | Msa0087020:CDS | 40.0% | |
| TTAAACACCTGAGGCAACAT+TGG | - | chr1_2:67805932-67805951 | Msa0087020:CDS | 40.0% | |
| TAAACACCTGAGGCAACATT+GGG | - | chr1_2:67805933-67805952 | Msa0087020:CDS | 40.0% | |
| TGGGTTTCTCAACTCATGAT+AGG | + | chr1_2:67806135-67806154 | None:intergenic | 40.0% | |
| CCCATGTCTTAACAAAGAGT+TGG | - | chr1_2:67806151-67806170 | Msa0087020:CDS | 40.0% | |
| AATGTTGGAGACTAACAAGG+CGG | - | chr1_2:67806187-67806206 | Msa0087020:CDS | 40.0% | |
| GGTTGTTCAATAATGTCCGA+TGG | - | chr1_2:67806224-67806243 | Msa0087020:CDS | 40.0% | |
| GTTCAATAATGTCCGATGGT+TGG | - | chr1_2:67806228-67806247 | Msa0087020:CDS | 40.0% | |
| ! | TTTTTAATCAACTCTCCGCC+AGG | - | chr1_2:67806281-67806300 | Msa0087020:intron | 40.0% |
| ! | TTTTCCGGTTTTCACTTCTG+AGG | + | chr1_2:67806336-67806355 | None:intergenic | 40.0% |
| !! | GATGAATTTGTTGGGGAGAT+TGG | - | chr1_2:67806374-67806393 | Msa0087020:intron | 40.0% |
| CTTACCGGCCAAAACATAAT+TGG | + | chr1_2:67806438-67806457 | None:intergenic | 40.0% | |
| !!! | CAATTATGTTTTGGCCGGTA+AGG | - | chr1_2:67806436-67806455 | Msa0087020:intron | 40.0% |
| ! | CAGCGAGACCAAAAATCTTT+TGG | - | chr1_2:67806558-67806577 | Msa0087020:intron | 40.0% |
| TCTATACAATGTGCTGCACA+TGG | + | chr1_2:67806587-67806606 | None:intergenic | 40.0% | |
| TGATTAGACATGGAGTCACA+AGG | - | chr1_2:67806738-67806757 | Msa0087020:intron | 40.0% | |
| TCAAGAGTGGTCAGACTTAA+AGG | - | chr1_2:67806832-67806851 | Msa0087020:intron | 40.0% | |
| !! | GGCCTCTTATAAGAGTACTT+AGG | - | chr1_2:67806945-67806964 | Msa0087020:CDS | 40.0% |
| CTGTCAACAATCTCAAGGAT+TGG | + | chr1_2:67807079-67807098 | None:intergenic | 40.0% | |
| CAATCCTTGAGATTGTTGAC+AGG | - | chr1_2:67807077-67807096 | Msa0087020:CDS | 40.0% | |
| TGATGACATCCATGCAGATT+TGG | - | chr1_2:67807255-67807274 | Msa0087020:CDS | 40.0% | |
| !! | GGATAAGTATAGGGCTAGTT+CGG | - | chr1_2:67807276-67807295 | Msa0087020:CDS | 40.0% |
| !! | GATAAGTATAGGGCTAGTTC+GGG | - | chr1_2:67807277-67807296 | Msa0087020:CDS | 40.0% |
| TTGTGCAGCAGAAGAATCAC+CGG | + | chr1_2:67805505-67805524 | None:intergenic | 45.0% | |
| AAACCAACCCTTCCTGACAT+AGG | - | chr1_2:67805552-67805571 | Msa0087020:CDS | 45.0% | |
| CTTCCATCCTATGTCAGGAA+GGG | + | chr1_2:67805562-67805581 | None:intergenic | 45.0% | |
| ACTTCCATCCTATGTCAGGA+AGG | + | chr1_2:67805563-67805582 | None:intergenic | 45.0% | |
| AGCTAATGAGGAAGCTAGAG+TGG | - | chr1_2:67805746-67805765 | Msa0087020:CDS | 45.0% | |
| TGAGGCTCAAGATGATGAAG+AGG | - | chr1_2:67805791-67805810 | Msa0087020:CDS | 45.0% | |
| CACGACTTCAAGAGATTGGA+AGG | - | chr1_2:67805817-67805836 | Msa0087020:CDS | 45.0% | |
| !! | GAGATTGGAAGGTTGGTAAG+TGG | - | chr1_2:67805828-67805847 | Msa0087020:CDS | 45.0% |
| !! | GAAGGTTGGTAAGTGGGAAA+AGG | - | chr1_2:67805835-67805854 | Msa0087020:CDS | 45.0% |
| GAAAAGGGCAAGGACTGAAA+TGG | - | chr1_2:67805851-67805870 | Msa0087020:CDS | 45.0% | |
| GACTGAAATGGAGAGTCTTC+CGG | - | chr1_2:67805863-67805882 | Msa0087020:CDS | 45.0% | |
| GTATTACCCTTCTTAGTGGC+CGG | + | chr1_2:67805885-67805904 | None:intergenic | 45.0% | |
| ! | CATTTTCCCAATGTTGCCTC+AGG | + | chr1_2:67805942-67805961 | None:intergenic | 45.0% |
| CTCAACTCATGATAGGAAGG+AGG | + | chr1_2:67806128-67806147 | None:intergenic | 45.0% | |
| AAGGCGGAAGCAGACAAATA+TGG | - | chr1_2:67806203-67806222 | Msa0087020:CDS | 45.0% | |
| ! | CTTTGTATCGGTCCAACCAT+CGG | + | chr1_2:67806243-67806262 | None:intergenic | 45.0% |
| GATGGTTGGACCGATACAAA+GGG | - | chr1_2:67806242-67806261 | Msa0087020:CDS | 45.0% | |
| GCTTCCTCAGAAGTGAAAAC+CGG | - | chr1_2:67806329-67806348 | Msa0087020:intron | 45.0% | |
| AACATAATTGGCCCCGTTGT+CGG | + | chr1_2:67806426-67806445 | None:intergenic | 45.0% | |
| ! | CAACGGGGCCAATTATGTTT+TGG | - | chr1_2:67806427-67806446 | Msa0087020:intron | 45.0% |
| !!! | ATTTTTGGTCTCGCTGCTTG+AGG | + | chr1_2:67806554-67806573 | None:intergenic | 45.0% |
| CCACTCTTGAGAAGTGAACA+TGG | + | chr1_2:67806822-67806841 | None:intergenic | 45.0% | |
| CCATGTTCACTTCTCAAGAG+TGG | - | chr1_2:67806819-67806838 | Msa0087020:intron | 45.0% | |
| AGAAGTTGCCTTCTTACCCT+TGG | + | chr1_2:67806870-67806889 | None:intergenic | 45.0% | |
| ! | ATCAAGCAATGGTGGGAGTA+AGG | - | chr1_2:67807008-67807027 | Msa0087020:CDS | 45.0% |
| TCCTTGAGATTGTTGACAGG+AGG | - | chr1_2:67807080-67807099 | Msa0087020:CDS | 45.0% | |
| ACCTCCTGTCAACAATCTCA+AGG | + | chr1_2:67807084-67807103 | None:intergenic | 45.0% | |
| TTGAGATTGTTGACAGGAGG+TGG | - | chr1_2:67807083-67807102 | Msa0087020:CDS | 45.0% | |
| TGAGATTGTTGACAGGAGGT+GGG | - | chr1_2:67807084-67807103 | Msa0087020:CDS | 45.0% | |
| AAATGTCCAGCTGCATGCAA+CGG | + | chr1_2:67807127-67807146 | None:intergenic | 45.0% | |
| AGAAGCAATAAGGCACAGAG+AGG | - | chr1_2:67807315-67807334 | Msa0087020:CDS | 45.0% | |
| TTGTGCAGCAGAAGAATCAC+CGG | + | chr1_2:67805505-67805524 | None:intergenic | 45.0% | |
| AAACCAACCCTTCCTGACAT+AGG | - | chr1_2:67805552-67805571 | Msa0087020:CDS | 45.0% | |
| CTTCCATCCTATGTCAGGAA+GGG | + | chr1_2:67805562-67805581 | None:intergenic | 45.0% | |
| ACTTCCATCCTATGTCAGGA+AGG | + | chr1_2:67805563-67805582 | None:intergenic | 45.0% | |
| AGCTAATGAGGAAGCTAGAG+TGG | - | chr1_2:67805746-67805765 | Msa0087020:CDS | 45.0% | |
| TGAGGCTCAAGATGATGAAG+AGG | - | chr1_2:67805791-67805810 | Msa0087020:CDS | 45.0% | |
| CACGACTTCAAGAGATTGGA+AGG | - | chr1_2:67805817-67805836 | Msa0087020:CDS | 45.0% | |
| !! | GAGATTGGAAGGTTGGTAAG+TGG | - | chr1_2:67805828-67805847 | Msa0087020:CDS | 45.0% |
| !! | GAAGGTTGGTAAGTGGGAAA+AGG | - | chr1_2:67805835-67805854 | Msa0087020:CDS | 45.0% |
| GAAAAGGGCAAGGACTGAAA+TGG | - | chr1_2:67805851-67805870 | Msa0087020:CDS | 45.0% | |
| GACTGAAATGGAGAGTCTTC+CGG | - | chr1_2:67805863-67805882 | Msa0087020:CDS | 45.0% | |
| GTATTACCCTTCTTAGTGGC+CGG | + | chr1_2:67805885-67805904 | None:intergenic | 45.0% | |
| ! | CATTTTCCCAATGTTGCCTC+AGG | + | chr1_2:67805942-67805961 | None:intergenic | 45.0% |
| CTCAACTCATGATAGGAAGG+AGG | + | chr1_2:67806128-67806147 | None:intergenic | 45.0% | |
| AAGGCGGAAGCAGACAAATA+TGG | - | chr1_2:67806203-67806222 | Msa0087020:CDS | 45.0% | |
| ! | CTTTGTATCGGTCCAACCAT+CGG | + | chr1_2:67806243-67806262 | None:intergenic | 45.0% |
| GATGGTTGGACCGATACAAA+GGG | - | chr1_2:67806242-67806261 | Msa0087020:CDS | 45.0% | |
| GCTTCCTCAGAAGTGAAAAC+CGG | - | chr1_2:67806329-67806348 | Msa0087020:intron | 45.0% | |
| AACATAATTGGCCCCGTTGT+CGG | + | chr1_2:67806426-67806445 | None:intergenic | 45.0% | |
| ! | CAACGGGGCCAATTATGTTT+TGG | - | chr1_2:67806427-67806446 | Msa0087020:intron | 45.0% |
| !!! | ATTTTTGGTCTCGCTGCTTG+AGG | + | chr1_2:67806554-67806573 | None:intergenic | 45.0% |
| CCACTCTTGAGAAGTGAACA+TGG | + | chr1_2:67806822-67806841 | None:intergenic | 45.0% | |
| CCATGTTCACTTCTCAAGAG+TGG | - | chr1_2:67806819-67806838 | Msa0087020:intron | 45.0% | |
| AGAAGTTGCCTTCTTACCCT+TGG | + | chr1_2:67806870-67806889 | None:intergenic | 45.0% | |
| ! | ATCAAGCAATGGTGGGAGTA+AGG | - | chr1_2:67807008-67807027 | Msa0087020:CDS | 45.0% |
| TCCTTGAGATTGTTGACAGG+AGG | - | chr1_2:67807080-67807099 | Msa0087020:CDS | 45.0% | |
| ACCTCCTGTCAACAATCTCA+AGG | + | chr1_2:67807084-67807103 | None:intergenic | 45.0% | |
| TTGAGATTGTTGACAGGAGG+TGG | - | chr1_2:67807083-67807102 | Msa0087020:CDS | 45.0% | |
| TGAGATTGTTGACAGGAGGT+GGG | - | chr1_2:67807084-67807103 | Msa0087020:CDS | 45.0% | |
| AAATGTCCAGCTGCATGCAA+CGG | + | chr1_2:67807127-67807146 | None:intergenic | 45.0% | |
| AGAAGCAATAAGGCACAGAG+AGG | - | chr1_2:67807315-67807334 | Msa0087020:CDS | 45.0% | |
| ! | TGTTGCTTCCTCTATTGGGC+TGG | - | chr1_2:67805527-67805546 | Msa0087020:CDS | 50.0% |
| TGGTTTGACCAGCCCAATAG+AGG | + | chr1_2:67805538-67805557 | None:intergenic | 50.0% | |
| CATCCTATGTCAGGAAGGGT+TGG | + | chr1_2:67805558-67805577 | None:intergenic | 50.0% | |
| CAACCCTTCCTGACATAGGA+TGG | - | chr1_2:67805556-67805575 | Msa0087020:CDS | 50.0% | |
| ! | TGTTTGTTGGAGTCTACGGG+AGG | - | chr1_2:67805633-67805652 | Msa0087020:CDS | 50.0% |
| AGTCTACGGGAGGAATTTCC+AGG | - | chr1_2:67805643-67805662 | Msa0087020:CDS | 50.0% | |
| GTCTACGGGAGGAATTTCCA+GGG | - | chr1_2:67805644-67805663 | Msa0087020:CDS | 50.0% | |
| ! | AGCTTGCTTAACGACACTGG+AGG | - | chr1_2:67805704-67805723 | Msa0087020:CDS | 50.0% |
| TTGCTTAACGACACTGGAGG+AGG | - | chr1_2:67805707-67805726 | Msa0087020:CDS | 50.0% | |
| TGAGGAAGCTAGAGTGGCAA+AGG | - | chr1_2:67805752-67805771 | Msa0087020:CDS | 50.0% | |
| GCAGCACGACTTCAAGAGAT+TGG | - | chr1_2:67805813-67805832 | Msa0087020:CDS | 50.0% | |
| TGGTAAGTGGGAAAAGGGCA+AGG | - | chr1_2:67805841-67805860 | Msa0087020:CDS | 50.0% | |
| AGTCTTCCGGCCACTAAGAA+GGG | - | chr1_2:67805876-67805895 | Msa0087020:CDS | 50.0% | |
| TAGGAAGGAGGCTTCAAGTG+AGG | + | chr1_2:67806116-67806135 | None:intergenic | 50.0% | |
| CGATGGTTGGACCGATACAA+AGG | - | chr1_2:67806241-67806260 | Msa0087020:CDS | 50.0% | |
| !!! | GGGGCCAATTATGTTTTGGC+CGG | - | chr1_2:67806431-67806450 | Msa0087020:intron | 50.0% |
| GTTGAGGGAGAAGGCTGAAA+TGG | - | chr1_2:67806712-67806731 | Msa0087020:intron | 50.0% | |
| AAAGGTGAGTGACGAAGCCA+AGG | - | chr1_2:67806850-67806869 | Msa0087020:intron | 50.0% | |
| AAGGTGAGTGACGAAGCCAA+GGG | - | chr1_2:67806851-67806870 | Msa0087020:intron | 50.0% | |
| TGACGAAGCCAAGGGTAAGA+AGG | - | chr1_2:67806859-67806878 | Msa0087020:intron | 50.0% | |
| GAGATTGTTGACAGGAGGTG+GGG | - | chr1_2:67807085-67807104 | Msa0087020:CDS | 50.0% | |
| ! | TGTTGCTTCCTCTATTGGGC+TGG | - | chr1_2:67805527-67805546 | Msa0087020:CDS | 50.0% |
| TGGTTTGACCAGCCCAATAG+AGG | + | chr1_2:67805538-67805557 | None:intergenic | 50.0% | |
| CATCCTATGTCAGGAAGGGT+TGG | + | chr1_2:67805558-67805577 | None:intergenic | 50.0% | |
| CAACCCTTCCTGACATAGGA+TGG | - | chr1_2:67805556-67805575 | Msa0087020:CDS | 50.0% | |
| ! | TGTTTGTTGGAGTCTACGGG+AGG | - | chr1_2:67805633-67805652 | Msa0087020:CDS | 50.0% |
| AGTCTACGGGAGGAATTTCC+AGG | - | chr1_2:67805643-67805662 | Msa0087020:CDS | 50.0% | |
| GTCTACGGGAGGAATTTCCA+GGG | - | chr1_2:67805644-67805663 | Msa0087020:CDS | 50.0% | |
| ! | AGCTTGCTTAACGACACTGG+AGG | - | chr1_2:67805704-67805723 | Msa0087020:CDS | 50.0% |
| TTGCTTAACGACACTGGAGG+AGG | - | chr1_2:67805707-67805726 | Msa0087020:CDS | 50.0% | |
| TGAGGAAGCTAGAGTGGCAA+AGG | - | chr1_2:67805752-67805771 | Msa0087020:CDS | 50.0% | |
| GCAGCACGACTTCAAGAGAT+TGG | - | chr1_2:67805813-67805832 | Msa0087020:CDS | 50.0% | |
| TGGTAAGTGGGAAAAGGGCA+AGG | - | chr1_2:67805841-67805860 | Msa0087020:CDS | 50.0% | |
| AGTCTTCCGGCCACTAAGAA+GGG | - | chr1_2:67805876-67805895 | Msa0087020:CDS | 50.0% | |
| TAGGAAGGAGGCTTCAAGTG+AGG | + | chr1_2:67806116-67806135 | None:intergenic | 50.0% | |
| CGATGGTTGGACCGATACAA+AGG | - | chr1_2:67806241-67806260 | Msa0087020:CDS | 50.0% | |
| !!! | GGGGCCAATTATGTTTTGGC+CGG | - | chr1_2:67806431-67806450 | Msa0087020:intron | 50.0% |
| GTTGAGGGAGAAGGCTGAAA+TGG | - | chr1_2:67806712-67806731 | Msa0087020:intron | 50.0% | |
| AAAGGTGAGTGACGAAGCCA+AGG | - | chr1_2:67806850-67806869 | Msa0087020:intron | 50.0% | |
| AAGGTGAGTGACGAAGCCAA+GGG | - | chr1_2:67806851-67806870 | Msa0087020:intron | 50.0% | |
| TGACGAAGCCAAGGGTAAGA+AGG | - | chr1_2:67806859-67806878 | Msa0087020:intron | 50.0% | |
| GAGATTGTTGACAGGAGGTG+GGG | - | chr1_2:67807085-67807104 | Msa0087020:CDS | 50.0% | |
| GAGTCTTCCGGCCACTAAGA+AGG | - | chr1_2:67805875-67805894 | Msa0087020:CDS | 55.0% | |
| CGAAAGCTGTGTTGTGCAGC+TGG | - | chr1_2:67806397-67806416 | Msa0087020:intron | 55.0% | |
| GTGCAGCTGGTTACCGACAA+CGG | - | chr1_2:67806410-67806429 | Msa0087020:intron | 55.0% | |
| TGCAGCTGGTTACCGACAAC+GGG | - | chr1_2:67806411-67806430 | Msa0087020:intron | 55.0% | |
| CATCATCCGTTGCATGCAGC+TGG | - | chr1_2:67807118-67807137 | Msa0087020:CDS | 55.0% | |
| GAGGATACGCGTACATCTCC+TGG | - | chr1_2:67807334-67807353 | Msa0087020:CDS | 55.0% | |
| GAGTCTTCCGGCCACTAAGA+AGG | - | chr1_2:67805875-67805894 | Msa0087020:CDS | 55.0% | |
| CGAAAGCTGTGTTGTGCAGC+TGG | - | chr1_2:67806397-67806416 | Msa0087020:intron | 55.0% | |
| GTGCAGCTGGTTACCGACAA+CGG | - | chr1_2:67806410-67806429 | Msa0087020:intron | 55.0% | |
| TGCAGCTGGTTACCGACAAC+GGG | - | chr1_2:67806411-67806430 | Msa0087020:intron | 55.0% | |
| CATCATCCGTTGCATGCAGC+TGG | - | chr1_2:67807118-67807137 | Msa0087020:CDS | 55.0% | |
| GAGGATACGCGTACATCTCC+TGG | - | chr1_2:67807334-67807353 | Msa0087020:CDS | 55.0% | |
| GCAGCTGGTTACCGACAACG+GGG | - | chr1_2:67806412-67806431 | Msa0087020:intron | 60.0% | |
| GCAGCTGGTTACCGACAACG+GGG | - | chr1_2:67806412-67806431 | Msa0087020:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 67805462 | 67807363 | 67805462 | ID=Msa0087020;Name=Msa0087020 |
| chr1_2 | mRNA | 67805462 | 67807363 | 67805462 | ID=Msa0087020-mRNA-1;Parent=Msa0087020;Name=Msa0087020-mRNA-1;_AED=0.51;_eAED=0.51;_QI=0|0|0|1|1|1|2|0|422 |
| chr1_2 | exon | 67806916 | 67807363 | 67806916 | ID=Msa0087020-mRNA-1:exon:23106;Parent=Msa0087020-mRNA-1 |
| chr1_2 | exon | 67805462 | 67806282 | 67805462 | ID=Msa0087020-mRNA-1:exon:23105;Parent=Msa0087020-mRNA-1 |
| chr1_2 | CDS | 67806916 | 67807363 | 67806916 | ID=Msa0087020-mRNA-1:cds;Parent=Msa0087020-mRNA-1 |
| chr1_2 | CDS | 67805462 | 67806282 | 67805462 | ID=Msa0087020-mRNA-1:cds;Parent=Msa0087020-mRNA-1 |
| Gene Sequence |
| Protein sequence |
