Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0097310 | XP_003589103.3 | 97.269 | 769 | 16 | 1 | 1 | 769 | 2 | 765 | 0.0 | 1540 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0097310 | sp|O65351|SBT17_ARATH | 60.649 | 770 | 285 | 6 | 2 | 769 | 4 | 757 | 0.0 | 970 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0097310 | Q2HRK7 | 97.269 | 769 | 16 | 1 | 1 | 769 | 2 | 765 | 0.0 | 1540 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0052200 | Msa0097310 | 0.994014 | 6.534657e-204 | -8.615850e-47 |
Msa0053480 | Msa0097310 | 0.809047 | 2.294496e-50 | -8.615850e-47 |
Msa0097310 | Msa0143360 | 0.814661 | 1.375260e-51 | -8.615850e-47 |
Msa0097310 | Msa0708090 | 0.806584 | 7.662881e-50 | -8.615850e-47 |
Msa0097310 | Msa0708230 | 0.800507 | 1.395262e-48 | -8.615850e-47 |
Msa0097310 | Msa1041770 | 0.802763 | 4.808318e-49 | -8.615850e-47 |
Msa0097310 | Msa1042380 | 0.813872 | 2.053782e-51 | -8.615850e-47 |
Msa0097310 | Msa1080280 | 0.813379 | 2.637533e-51 | -8.615850e-47 |
Msa0097310 | Msa1125050 | 0.806851 | 6.729695e-50 | -8.615850e-47 |
Msa0097310 | Msa1125100 | 0.815501 | 8.951391e-52 | -8.615850e-47 |
Msa0097310 | Msa1125150 | 0.811479 | 6.858568e-51 | -8.615850e-47 |
Msa0097310 | Msa1244300 | 0.823804 | 1.137073e-53 | -8.615850e-47 |
Msa0097310 | Msa1296610 | 0.801227 | 9.943526e-49 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0097310 | MtrunA17_Chr1g0152771 | 97.269 | 769 | 16 | 1 | 1 | 769 | 2 | 765 | 0.0 | 1540 |
Msa0097310 | MtrunA17_Chr3g0134621 | 69.571 | 769 | 201 | 3 | 1 | 769 | 3 | 738 | 0.0 | 1082 |
Msa0097310 | MtrunA17_Chr4g0053781 | 62.286 | 761 | 268 | 6 | 9 | 768 | 14 | 756 | 0.0 | 991 |
Msa0097310 | MtrunA17_Chr5g0401511 | 57.632 | 760 | 309 | 5 | 11 | 768 | 14 | 762 | 0.0 | 899 |
Msa0097310 | MtrunA17_Chr4g0020651 | 57.012 | 763 | 313 | 6 | 9 | 768 | 8 | 758 | 0.0 | 874 |
Msa0097310 | MtrunA17_Chr2g0300751 | 50.063 | 791 | 348 | 11 | 6 | 769 | 5 | 775 | 0.0 | 737 |
Msa0097310 | MtrunA17_Chr1g0204321 | 47.141 | 787 | 383 | 11 | 1 | 768 | 6 | 778 | 0.0 | 721 |
Msa0097310 | MtrunA17_Chr8g0344331 | 50.131 | 766 | 342 | 16 | 24 | 769 | 32 | 777 | 0.0 | 708 |
Msa0097310 | MtrunA17_Chr4g0037221 | 49.001 | 751 | 348 | 11 | 32 | 764 | 32 | 765 | 0.0 | 700 |
Msa0097310 | MtrunA17_Chr4g0070391 | 49.482 | 772 | 358 | 11 | 6 | 769 | 7 | 754 | 0.0 | 697 |
Msa0097310 | MtrunA17_Chr8g0344971 | 46.382 | 774 | 374 | 13 | 9 | 764 | 7 | 757 | 0.0 | 642 |
Msa0097310 | MtrunA17_Chr7g0246461 | 43.268 | 765 | 362 | 9 | 30 | 768 | 23 | 741 | 0.0 | 620 |
Msa0097310 | MtrunA17_Chr7g0262161 | 44.021 | 761 | 388 | 16 | 28 | 769 | 22 | 763 | 0.0 | 593 |
Msa0097310 | MtrunA17_Chr3g0120521 | 43.221 | 745 | 381 | 15 | 37 | 764 | 48 | 767 | 0.0 | 588 |
Msa0097310 | MtrunA17_Chr4g0057481 | 45.559 | 698 | 349 | 13 | 84 | 768 | 12 | 691 | 0.0 | 576 |
Msa0097310 | MtrunA17_Chr4g0076611 | 43.217 | 715 | 368 | 12 | 66 | 765 | 1 | 692 | 0.0 | 566 |
Msa0097310 | MtrunA17_Chr4g0057471 | 43.497 | 715 | 374 | 12 | 66 | 767 | 12 | 709 | 0.0 | 566 |
Msa0097310 | MtrunA17_Chr4g0057531 | 41.299 | 770 | 405 | 14 | 23 | 764 | 24 | 774 | 0.0 | 562 |
Msa0097310 | MtrunA17_Chr4g0057491 | 46.154 | 637 | 318 | 11 | 141 | 768 | 3 | 623 | 0.0 | 538 |
Msa0097310 | MtrunA17_Chr5g0423261 | 46.395 | 638 | 317 | 11 | 140 | 768 | 2 | 623 | 0.0 | 533 |
Msa0097310 | MtrunA17_Chr8g0345971 | 41.138 | 756 | 396 | 16 | 31 | 764 | 28 | 756 | 2.36e-176 | 525 |
Msa0097310 | MtrunA17_Chr4g0057061 | 41.419 | 775 | 385 | 20 | 19 | 769 | 48 | 777 | 6.20e-176 | 524 |
Msa0097310 | MtrunA17_Chr4g0057511 | 46.203 | 632 | 311 | 14 | 147 | 768 | 5 | 617 | 1.89e-175 | 517 |
Msa0097310 | MtrunA17_Chr5g0398331 | 41.767 | 747 | 382 | 16 | 32 | 765 | 43 | 749 | 6.08e-175 | 521 |
Msa0097310 | MtrunA17_Chr1g0189251 | 39.947 | 751 | 407 | 14 | 31 | 764 | 28 | 751 | 1.66e-174 | 520 |
Msa0097310 | MtrunA17_Chr5g0407701 | 40.841 | 737 | 378 | 16 | 48 | 764 | 49 | 747 | 6.36e-174 | 518 |
Msa0097310 | MtrunA17_Chr8g0345981 | 41.434 | 753 | 394 | 20 | 33 | 764 | 29 | 755 | 1.49e-173 | 517 |
Msa0097310 | MtrunA17_Chr5g0398241 | 41.191 | 789 | 396 | 19 | 1 | 765 | 8 | 752 | 3.64e-172 | 513 |
Msa0097310 | MtrunA17_Chr5g0398311 | 42.148 | 745 | 378 | 13 | 32 | 765 | 43 | 745 | 4.67e-172 | 513 |
Msa0097310 | MtrunA17_Chr8g0369891 | 40.690 | 725 | 361 | 17 | 64 | 764 | 71 | 750 | 5.14e-172 | 513 |
Msa0097310 | MtrunA17_Chr7g0250481 | 40.526 | 760 | 387 | 21 | 49 | 764 | 57 | 795 | 3.80e-171 | 512 |
Msa0097310 | MtrunA17_Chr2g0285121 | 41.169 | 753 | 378 | 20 | 57 | 768 | 56 | 784 | 4.03e-171 | 512 |
Msa0097310 | MtrunA17_Chr5g0398401 | 41.445 | 789 | 394 | 20 | 1 | 765 | 8 | 752 | 1.41e-170 | 509 |
Msa0097310 | MtrunA17_Chr8g0345991 | 39.600 | 750 | 412 | 16 | 31 | 764 | 27 | 751 | 1.23e-169 | 507 |
Msa0097310 | MtrunA17_Chr8g0377961 | 40.629 | 763 | 400 | 19 | 28 | 765 | 39 | 773 | 2.56e-169 | 507 |
Msa0097310 | MtrunA17_Chr2g0285111 | 41.375 | 742 | 375 | 20 | 64 | 768 | 69 | 787 | 2.71e-169 | 507 |
Msa0097310 | MtrunA17_Chr7g0276151 | 39.075 | 778 | 425 | 14 | 3 | 764 | 9 | 753 | 1.06e-168 | 505 |
Msa0097310 | MtrunA17_Chr5g0398351 | 40.510 | 785 | 407 | 18 | 1 | 765 | 759 | 1503 | 5.53e-167 | 521 |
Msa0097310 | MtrunA17_Chr5g0398351 | 41.012 | 751 | 383 | 15 | 32 | 765 | 25 | 732 | 5.57e-160 | 502 |
Msa0097310 | MtrunA17_Chr4g0057461 | 42.391 | 644 | 337 | 14 | 141 | 767 | 3 | 629 | 3.00e-166 | 494 |
Msa0097310 | MtrunA17_Chr4g0026641 | 39.822 | 786 | 416 | 21 | 1 | 764 | 1 | 751 | 1.74e-163 | 491 |
Msa0097310 | MtrunA17_Chr8g0345961 | 39.924 | 789 | 414 | 22 | 8 | 769 | 4 | 759 | 3.80e-163 | 491 |
Msa0097310 | MtrunA17_Chr7g0250411 | 40.508 | 748 | 393 | 22 | 49 | 766 | 58 | 783 | 2.36e-162 | 489 |
Msa0097310 | MtrunA17_Chr7g0250371 | 39.723 | 793 | 410 | 25 | 12 | 764 | 18 | 782 | 3.70e-160 | 484 |
Msa0097310 | MtrunA17_Chr2g0303881 | 40.349 | 746 | 392 | 19 | 42 | 764 | 8 | 723 | 2.74e-159 | 479 |
Msa0097310 | MtrunA17_Chr7g0250391 | 40.613 | 751 | 388 | 22 | 47 | 764 | 55 | 780 | 1.75e-158 | 479 |
Msa0097310 | MtrunA17_Chr1g0189561 | 37.786 | 786 | 427 | 23 | 6 | 764 | 8 | 758 | 1.52e-157 | 476 |
Msa0097310 | MtrunA17_Chr3g0136151 | 38.052 | 770 | 421 | 19 | 21 | 767 | 26 | 762 | 1.91e-155 | 471 |
Msa0097310 | MtrunA17_Chr7g0250331 | 39.762 | 757 | 370 | 23 | 66 | 764 | 76 | 804 | 1.58e-154 | 470 |
Msa0097310 | MtrunA17_Chr8g0354771 | 37.940 | 767 | 433 | 15 | 15 | 760 | 13 | 757 | 1.01e-152 | 464 |
Msa0097310 | MtrunA17_Chr7g0266051 | 40.678 | 708 | 372 | 19 | 66 | 764 | 35 | 703 | 1.75e-151 | 459 |
Msa0097310 | MtrunA17_Chr7g0248871 | 37.139 | 797 | 427 | 23 | 2 | 764 | 5 | 761 | 2.54e-151 | 460 |
Msa0097310 | MtrunA17_Chr7g0227991 | 37.212 | 739 | 411 | 15 | 33 | 764 | 39 | 731 | 2.51e-149 | 454 |
Msa0097310 | MtrunA17_Chr3g0143251 | 38.346 | 798 | 425 | 26 | 4 | 767 | 1 | 765 | 4.96e-149 | 454 |
Msa0097310 | MtrunA17_Chr6g0470881 | 38.030 | 731 | 379 | 19 | 49 | 764 | 56 | 727 | 5.27e-146 | 445 |
Msa0097310 | MtrunA17_Chr6g0470851 | 35.817 | 765 | 424 | 19 | 11 | 764 | 19 | 727 | 8.59e-146 | 445 |
Msa0097310 | MtrunA17_Chr8g0334521 | 36.093 | 773 | 429 | 18 | 3 | 764 | 13 | 731 | 1.37e-144 | 442 |
Msa0097310 | MtrunA17_Chr5g0439271 | 40.879 | 614 | 314 | 13 | 178 | 764 | 8 | 599 | 7.44e-144 | 435 |
Msa0097310 | MtrunA17_Chr8g0351011 | 37.831 | 756 | 404 | 23 | 28 | 764 | 41 | 749 | 1.11e-141 | 435 |
Msa0097310 | MtrunA17_Chr1g0146251 | 36.933 | 750 | 411 | 21 | 28 | 764 | 32 | 732 | 9.60e-141 | 432 |
Msa0097310 | MtrunA17_Chr1g0146271 | 36.751 | 751 | 409 | 21 | 28 | 764 | 32 | 730 | 1.02e-139 | 429 |
Msa0097310 | MtrunA17_Chr1g0170081 | 35.052 | 776 | 431 | 24 | 7 | 764 | 8 | 728 | 2.63e-137 | 423 |
Msa0097310 | MtrunA17_Chr8g0354741 | 39.688 | 640 | 349 | 11 | 135 | 765 | 21 | 632 | 3.31e-137 | 419 |
Msa0097310 | MtrunA17_Chr3g0079971 | 35.550 | 782 | 426 | 23 | 3 | 764 | 6 | 729 | 4.82e-136 | 419 |
Msa0097310 | MtrunA17_Chr7g0246451 | 36.618 | 751 | 419 | 20 | 28 | 764 | 36 | 743 | 1.30e-135 | 419 |
Msa0097310 | MtrunA17_Chr8g0334491 | 36.649 | 734 | 389 | 22 | 47 | 764 | 52 | 725 | 8.28e-133 | 411 |
Msa0097310 | MtrunA17_Chr7g0248861 | 40.131 | 613 | 316 | 17 | 32 | 612 | 29 | 622 | 4.75e-126 | 397 |
Msa0097310 | MtrunA17_Chr7g0248861 | 51.770 | 226 | 104 | 4 | 132 | 355 | 637 | 859 | 6.05e-56 | 206 |
Msa0097310 | MtrunA17_Chr8g0376841 | 39.646 | 565 | 303 | 13 | 28 | 574 | 37 | 581 | 6.08e-119 | 370 |
Msa0097310 | MtrunA17_Chr5g0447171 | 37.452 | 526 | 253 | 10 | 290 | 765 | 7 | 506 | 9.01e-99 | 315 |
Msa0097310 | MtrunA17_Chr2g0301011 | 36.131 | 548 | 274 | 11 | 94 | 637 | 3 | 478 | 1.62e-97 | 311 |
Msa0097310 | MtrunA17_Chr4g0071871 | 32.237 | 760 | 423 | 29 | 63 | 764 | 86 | 811 | 5.08e-94 | 311 |
Msa0097310 | MtrunA17_Chr3g0143241 | 39.588 | 485 | 257 | 15 | 4 | 465 | 1 | 472 | 2.03e-92 | 300 |
Msa0097310 | MtrunA17_Chr2g0298601 | 32.500 | 760 | 425 | 28 | 61 | 764 | 84 | 811 | 7.85e-91 | 303 |
Msa0097310 | MtrunA17_Chr7g0261691 | 44.058 | 345 | 181 | 6 | 130 | 465 | 6 | 347 | 8.84e-89 | 283 |
Msa0097310 | MtrunA17_Chr7g0250461 | 40.670 | 418 | 221 | 13 | 49 | 444 | 58 | 470 | 1.20e-86 | 282 |
Msa0097310 | MtrunA17_Chr4g0075331 | 32.562 | 648 | 379 | 19 | 67 | 666 | 15 | 652 | 2.73e-77 | 264 |
Msa0097310 | MtrunA17_Chr7g0261701 | 44.000 | 300 | 148 | 5 | 465 | 764 | 8 | 287 | 1.54e-76 | 249 |
Msa0097310 | MtrunA17_Chr6g0480721 | 40.615 | 325 | 172 | 6 | 66 | 384 | 5 | 314 | 3.39e-74 | 253 |
Msa0097310 | MtrunA17_Chr6g0480721 | 39.604 | 303 | 157 | 9 | 464 | 764 | 319 | 597 | 4.98e-52 | 192 |
Msa0097310 | MtrunA17_Chr2g0302951 | 33.439 | 631 | 361 | 21 | 54 | 631 | 95 | 719 | 4.28e-74 | 258 |
Msa0097310 | MtrunA17_Chr8g0380961 | 31.467 | 750 | 440 | 26 | 67 | 765 | 118 | 844 | 7.71e-73 | 254 |
Msa0097310 | MtrunA17_Chr4g0026651 | 42.193 | 301 | 143 | 5 | 81 | 351 | 2 | 301 | 2.12e-69 | 231 |
Msa0097310 | MtrunA17_Chr4g0035881 | 37.940 | 369 | 164 | 6 | 216 | 574 | 4 | 317 | 2.74e-63 | 214 |
Msa0097310 | MtrunA17_Chr7g0250441 | 44.291 | 289 | 141 | 7 | 481 | 766 | 11 | 282 | 2.49e-62 | 211 |
Msa0097310 | MtrunA17_Chr8g0346361 | 38.253 | 332 | 182 | 6 | 434 | 764 | 185 | 494 | 3.89e-62 | 217 |
Msa0097310 | MtrunA17_Chr8g0346361 | 46.040 | 202 | 90 | 4 | 154 | 353 | 4 | 188 | 3.42e-46 | 172 |
Msa0097310 | MtrunA17_Chr3g0097061 | 37.971 | 345 | 172 | 11 | 94 | 426 | 3 | 317 | 2.10e-58 | 205 |
Msa0097310 | MtrunA17_Chr3g0097061 | 38.462 | 143 | 76 | 2 | 514 | 652 | 307 | 441 | 1.80e-19 | 92.0 |
Msa0097310 | MtrunA17_Chr3g0105461 | 37.466 | 363 | 168 | 10 | 4 | 351 | 1 | 319 | 9.77e-56 | 195 |
Msa0097310 | MtrunA17_Chr3g0103071 | 39.146 | 281 | 156 | 5 | 267 | 537 | 4 | 279 | 1.94e-54 | 189 |
Msa0097310 | MtrunA17_Chr3g0105451 | 37.374 | 297 | 155 | 8 | 476 | 767 | 9 | 279 | 1.85e-50 | 178 |
Msa0097310 | MtrunA17_Chr2g0301031 | 38.290 | 269 | 135 | 6 | 502 | 764 | 1 | 244 | 1.21e-48 | 172 |
Msa0097310 | MtrunA17_Chr2g0301911 | 34.783 | 368 | 197 | 12 | 149 | 505 | 25 | 360 | 1.27e-48 | 176 |
Msa0097310 | MtrunA17_Chr3g0103061 | 36.466 | 266 | 147 | 6 | 6 | 255 | 2 | 261 | 3.26e-48 | 171 |
Msa0097310 | MtrunA17_Chr2g0312861 | 38.113 | 265 | 141 | 6 | 502 | 764 | 1 | 244 | 2.37e-47 | 170 |
Msa0097310 | MtrunA17_Chr4g0026661 | 39.773 | 264 | 140 | 6 | 502 | 764 | 12 | 257 | 6.92e-47 | 167 |
Msa0097310 | MtrunA17_Chr2g0312841 | 44.898 | 196 | 90 | 4 | 154 | 347 | 9 | 188 | 5.53e-43 | 154 |
Msa0097310 | MtrunA17_Chr4g0071191 | 38.208 | 212 | 111 | 5 | 483 | 692 | 57 | 250 | 6.74e-36 | 136 |
Msa0097310 | MtrunA17_Chr2g0301921 | 35.714 | 224 | 121 | 5 | 543 | 764 | 1 | 203 | 1.05e-34 | 131 |
Msa0097310 | MtrunA17_Chr5g0436021 | 43.373 | 166 | 81 | 2 | 179 | 341 | 31 | 186 | 1.20e-34 | 130 |
Msa0097310 | MtrunA17_Chr3g0103081 | 40.645 | 155 | 77 | 4 | 610 | 764 | 1 | 140 | 2.63e-31 | 119 |
Msa0097310 | MtrunA17_Chr2g0301021 | 29.700 | 367 | 153 | 12 | 109 | 471 | 98 | 363 | 4.24e-31 | 125 |
Msa0097310 | MtrunA17_Chr5g0418921 | 44.853 | 136 | 74 | 1 | 471 | 605 | 1 | 136 | 8.02e-29 | 113 |
Msa0097310 | MtrunA17_Chr3g0142981 | 40.462 | 173 | 67 | 3 | 182 | 351 | 32 | 171 | 2.44e-27 | 110 |
Msa0097310 | MtrunA17_Chr5g0398341 | 48.454 | 97 | 49 | 1 | 543 | 639 | 1 | 96 | 2.02e-22 | 92.4 |
Msa0097310 | MtrunA17_Chr3g0143021 | 41.000 | 100 | 59 | 0 | 66 | 165 | 7 | 106 | 1.21e-21 | 90.9 |
Msa0097310 | MtrunA17_Chr3g0143231 | 54.444 | 90 | 40 | 1 | 485 | 574 | 1 | 89 | 7.39e-21 | 87.8 |
Msa0097310 | MtrunA17_Chr3g0142971 | 54.651 | 86 | 38 | 1 | 485 | 570 | 1 | 85 | 8.27e-20 | 84.7 |
Msa0097310 | MtrunA17_Chr4g0035871 | 37.415 | 147 | 86 | 3 | 35 | 178 | 7 | 150 | 2.51e-18 | 82.8 |
Msa0097310 | MtrunA17_Chr5g0436031 | 30.814 | 172 | 105 | 5 | 594 | 764 | 20 | 178 | 4.21e-17 | 80.9 |
Msa0097310 | MtrunA17_Chr5g0439281 | 33.600 | 125 | 73 | 3 | 66 | 180 | 73 | 197 | 9.89e-17 | 79.3 |
Msa0097310 | MtrunA17_Chr8g0376851 | 31.214 | 173 | 102 | 5 | 597 | 765 | 11 | 170 | 1.01e-14 | 72.8 |
Msa0097310 | MtrunA17_Chr3g0077671 | 47.887 | 71 | 36 | 1 | 533 | 602 | 236 | 306 | 4.46e-14 | 73.9 |
Msa0097310 | MtrunA17_Chr8g0346961 | 34.146 | 123 | 72 | 3 | 572 | 693 | 1 | 115 | 2.57e-12 | 64.3 |
Msa0097310 | MtrunA17_Chr3g0143011 | 50.847 | 59 | 29 | 0 | 302 | 360 | 1 | 59 | 3.20e-11 | 59.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0097310 | AT5G67360.1 | 60.649 | 770 | 285 | 6 | 2 | 769 | 4 | 757 | 0.0 | 970 |
Msa0097310 | AT2G05920.1 | 51.905 | 761 | 335 | 10 | 13 | 768 | 17 | 751 | 0.0 | 739 |
Msa0097310 | AT5G51750.1 | 47.471 | 771 | 376 | 10 | 13 | 768 | 20 | 776 | 0.0 | 713 |
Msa0097310 | AT3G14067.1 | 48.143 | 781 | 372 | 10 | 4 | 768 | 6 | 769 | 0.0 | 712 |
Msa0097310 | AT3G14240.1 | 48.074 | 753 | 365 | 10 | 32 | 767 | 27 | 770 | 0.0 | 692 |
Msa0097310 | AT4G34980.1 | 47.021 | 772 | 382 | 12 | 4 | 764 | 1 | 756 | 0.0 | 679 |
Msa0097310 | AT1G04110.1 | 42.018 | 783 | 408 | 15 | 10 | 767 | 10 | 771 | 0.0 | 588 |
Msa0097310 | AT2G04160.1 | 44.966 | 745 | 367 | 16 | 37 | 764 | 50 | 768 | 0.0 | 585 |
Msa0097310 | AT1G01900.1 | 44.638 | 746 | 393 | 9 | 30 | 768 | 41 | 773 | 0.0 | 583 |
Msa0097310 | AT5G59810.1 | 42.595 | 763 | 381 | 16 | 30 | 764 | 39 | 772 | 0.0 | 562 |
Msa0097310 | AT5G45650.2 | 39.520 | 792 | 403 | 16 | 28 | 767 | 22 | 789 | 2.37e-179 | 533 |
Msa0097310 | AT5G45650.1 | 39.520 | 792 | 403 | 16 | 28 | 767 | 22 | 789 | 2.37e-179 | 533 |
Msa0097310 | AT5G59120.1 | 39.651 | 744 | 393 | 14 | 30 | 764 | 29 | 725 | 4.12e-164 | 492 |
Msa0097310 | AT5G59090.1 | 39.406 | 741 | 393 | 16 | 33 | 764 | 33 | 726 | 5.63e-162 | 487 |
Msa0097310 | AT1G20160.2 | 40.385 | 728 | 378 | 18 | 65 | 767 | 27 | 723 | 2.43e-161 | 485 |
Msa0097310 | AT5G59090.3 | 39.406 | 741 | 391 | 17 | 33 | 764 | 33 | 724 | 1.18e-160 | 483 |
Msa0097310 | AT1G20160.1 | 40.385 | 728 | 378 | 18 | 65 | 767 | 66 | 762 | 1.62e-160 | 484 |
Msa0097310 | AT5G59090.2 | 39.271 | 741 | 389 | 16 | 33 | 764 | 33 | 721 | 1.68e-160 | 483 |
Msa0097310 | AT5G58840.1 | 38.220 | 764 | 394 | 19 | 9 | 764 | 11 | 704 | 2.28e-156 | 472 |
Msa0097310 | AT5G58830.1 | 37.154 | 759 | 404 | 16 | 11 | 764 | 13 | 703 | 2.09e-152 | 461 |
Msa0097310 | AT5G03620.1 | 38.501 | 787 | 413 | 22 | 10 | 764 | 9 | 756 | 1.19e-150 | 459 |
Msa0097310 | AT5G59130.4 | 36.883 | 770 | 421 | 18 | 4 | 764 | 10 | 723 | 2.01e-150 | 457 |
Msa0097310 | AT5G59130.1 | 36.753 | 770 | 418 | 19 | 4 | 764 | 10 | 719 | 1.31e-147 | 450 |
Msa0097310 | AT5G59130.2 | 37.013 | 770 | 410 | 21 | 4 | 764 | 10 | 713 | 3.70e-147 | 448 |
Msa0097310 | AT5G59130.3 | 37.379 | 725 | 395 | 16 | 46 | 764 | 13 | 684 | 7.07e-147 | 447 |
Msa0097310 | AT3G46850.1 | 37.384 | 757 | 407 | 20 | 25 | 764 | 26 | 732 | 2.92e-146 | 446 |
Msa0097310 | AT5G58820.1 | 36.068 | 768 | 403 | 19 | 9 | 764 | 7 | 698 | 1.06e-144 | 441 |
Msa0097310 | AT4G10550.1 | 36.318 | 793 | 448 | 19 | 1 | 765 | 2 | 765 | 1.18e-144 | 444 |
Msa0097310 | AT4G10550.3 | 36.168 | 788 | 447 | 18 | 5 | 765 | 23 | 781 | 1.27e-143 | 441 |
Msa0097310 | AT1G20150.1 | 37.549 | 759 | 424 | 19 | 33 | 764 | 33 | 768 | 2.30e-143 | 440 |
Msa0097310 | AT4G10550.4 | 37.759 | 723 | 398 | 16 | 66 | 765 | 16 | 709 | 3.89e-143 | 438 |
Msa0097310 | AT4G10550.2 | 37.759 | 723 | 398 | 16 | 66 | 765 | 16 | 709 | 3.89e-143 | 438 |
Msa0097310 | AT5G59100.1 | 36.133 | 750 | 418 | 19 | 30 | 764 | 32 | 735 | 3.93e-143 | 438 |
Msa0097310 | AT3G46840.1 | 36.658 | 772 | 425 | 21 | 7 | 764 | 11 | 732 | 1.05e-142 | 437 |
Msa0097310 | AT4G00230.1 | 37.881 | 755 | 417 | 19 | 22 | 764 | 27 | 741 | 1.56e-142 | 437 |
Msa0097310 | AT1G32960.1 | 38.003 | 771 | 421 | 22 | 22 | 765 | 24 | 764 | 9.16e-142 | 436 |
Msa0097310 | AT4G10520.1 | 35.705 | 773 | 453 | 18 | 6 | 765 | 2 | 743 | 7.12e-141 | 433 |
Msa0097310 | AT4G10540.1 | 37.784 | 749 | 411 | 18 | 43 | 765 | 43 | 762 | 1.46e-140 | 433 |
Msa0097310 | AT5G59190.1 | 37.332 | 742 | 389 | 22 | 41 | 764 | 3 | 686 | 2.37e-140 | 429 |
Msa0097310 | AT5G67090.1 | 36.375 | 767 | 410 | 20 | 9 | 755 | 7 | 715 | 4.43e-140 | 430 |
Msa0097310 | AT1G32940.4 | 38.366 | 722 | 396 | 17 | 66 | 765 | 16 | 710 | 3.21e-139 | 427 |
Msa0097310 | AT1G32940.2 | 38.366 | 722 | 396 | 17 | 66 | 765 | 16 | 710 | 3.21e-139 | 427 |
Msa0097310 | AT5G45640.1 | 37.417 | 751 | 375 | 21 | 75 | 767 | 39 | 752 | 4.42e-139 | 428 |
Msa0097310 | AT1G66220.1 | 36.889 | 778 | 427 | 20 | 6 | 765 | 12 | 743 | 8.60e-139 | 427 |
Msa0097310 | AT1G32940.1 | 38.366 | 722 | 396 | 17 | 66 | 765 | 67 | 761 | 1.12e-138 | 428 |
Msa0097310 | AT4G26330.2 | 36.957 | 736 | 422 | 16 | 50 | 764 | 5 | 719 | 3.90e-138 | 425 |
Msa0097310 | AT4G10510.2 | 36.944 | 720 | 407 | 16 | 66 | 765 | 1 | 693 | 8.75e-136 | 418 |
Msa0097310 | AT4G10510.1 | 36.644 | 745 | 423 | 17 | 43 | 765 | 35 | 752 | 1.01e-135 | 420 |
Msa0097310 | AT4G10510.4 | 36.944 | 720 | 407 | 16 | 66 | 765 | 16 | 708 | 1.30e-135 | 418 |
Msa0097310 | AT4G10510.3 | 36.644 | 745 | 423 | 17 | 43 | 765 | 47 | 764 | 2.10e-135 | 419 |
Msa0097310 | AT1G66210.1 | 36.305 | 774 | 432 | 19 | 9 | 765 | 20 | 749 | 3.38e-134 | 416 |
Msa0097310 | AT4G26330.1 | 36.267 | 750 | 422 | 17 | 50 | 764 | 5 | 733 | 3.70e-134 | 415 |
Msa0097310 | AT4G21650.1 | 35.013 | 794 | 413 | 24 | 20 | 769 | 29 | 763 | 7.14e-132 | 410 |
Msa0097310 | AT4G21630.1 | 35.419 | 799 | 436 | 23 | 1 | 769 | 8 | 756 | 1.15e-131 | 409 |
Msa0097310 | AT5G11940.1 | 36.449 | 749 | 403 | 23 | 43 | 765 | 50 | 751 | 8.40e-131 | 407 |
Msa0097310 | AT4G10530.1 | 34.106 | 777 | 451 | 18 | 6 | 765 | 2 | 734 | 3.07e-130 | 405 |
Msa0097310 | AT5G03620.2 | 41.438 | 584 | 306 | 13 | 10 | 574 | 9 | 575 | 1.95e-129 | 397 |
Msa0097310 | AT1G32950.2 | 37.759 | 723 | 398 | 20 | 66 | 765 | 16 | 709 | 5.13e-129 | 401 |
Msa0097310 | AT1G32950.1 | 36.468 | 787 | 440 | 24 | 6 | 765 | 7 | 760 | 1.02e-128 | 402 |
Msa0097310 | AT4G15040.2 | 36.066 | 732 | 394 | 19 | 46 | 764 | 13 | 683 | 9.28e-126 | 392 |
Msa0097310 | AT4G15040.1 | 36.066 | 732 | 394 | 19 | 46 | 764 | 13 | 683 | 9.28e-126 | 392 |
Msa0097310 | AT4G21640.1 | 34.043 | 799 | 419 | 23 | 1 | 769 | 10 | 730 | 9.97e-126 | 393 |
Msa0097310 | AT4G00230.2 | 41.355 | 561 | 302 | 13 | 22 | 574 | 27 | 568 | 1.17e-119 | 373 |
Msa0097310 | AT4G21323.1 | 36.054 | 735 | 412 | 21 | 49 | 766 | 100 | 793 | 1.06e-117 | 374 |
Msa0097310 | AT5G58840.3 | 38.743 | 573 | 292 | 14 | 9 | 574 | 11 | 531 | 3.37e-115 | 359 |
Msa0097310 | AT1G32940.3 | 40.395 | 557 | 293 | 14 | 43 | 574 | 42 | 584 | 7.09e-114 | 358 |
Msa0097310 | AT4G21326.1 | 33.014 | 730 | 423 | 15 | 57 | 765 | 2 | 686 | 1.10e-113 | 360 |
Msa0097310 | AT1G32970.1 | 35.526 | 684 | 372 | 18 | 104 | 765 | 85 | 721 | 3.14e-106 | 342 |
Msa0097310 | AT1G20160.3 | 42.266 | 459 | 229 | 9 | 65 | 503 | 66 | 508 | 3.70e-103 | 328 |
Msa0097310 | AT2G19170.1 | 33.156 | 754 | 417 | 29 | 67 | 764 | 86 | 808 | 3.31e-97 | 320 |
Msa0097310 | AT2G19170.2 | 33.156 | 754 | 417 | 29 | 67 | 764 | 86 | 808 | 3.31e-97 | 320 |
Msa0097310 | AT4G30020.3 | 34.198 | 655 | 362 | 21 | 67 | 666 | 86 | 726 | 2.37e-92 | 307 |
Msa0097310 | AT4G30020.1 | 34.198 | 655 | 362 | 21 | 67 | 666 | 86 | 726 | 2.37e-92 | 307 |
Msa0097310 | AT4G30020.4 | 34.198 | 655 | 362 | 21 | 67 | 666 | 86 | 726 | 2.37e-92 | 307 |
Msa0097310 | AT4G30020.2 | 34.198 | 655 | 362 | 21 | 67 | 666 | 86 | 726 | 2.37e-92 | 307 |
Msa0097310 | AT1G30600.1 | 31.654 | 774 | 436 | 27 | 54 | 765 | 83 | 825 | 2.61e-89 | 299 |
Msa0097310 | AT5G58840.2 | 37.067 | 491 | 250 | 14 | 20 | 503 | 22 | 460 | 2.03e-85 | 279 |
Msa0097310 | AT2G39850.1 | 30.094 | 741 | 434 | 21 | 66 | 764 | 65 | 763 | 1.04e-84 | 285 |
Msa0097310 | AT4G20430.3 | 32.372 | 624 | 351 | 18 | 67 | 631 | 119 | 730 | 3.30e-82 | 280 |
Msa0097310 | AT4G20430.1 | 32.372 | 624 | 351 | 18 | 67 | 631 | 119 | 730 | 3.30e-82 | 280 |
Msa0097310 | AT5G44530.1 | 32.078 | 717 | 406 | 27 | 39 | 699 | 80 | 771 | 2.49e-81 | 278 |
Msa0097310 | AT4G20430.2 | 32.143 | 616 | 339 | 18 | 67 | 631 | 119 | 706 | 2.40e-80 | 275 |
Msa0097310 | AT1G62340.1 | 32.748 | 626 | 346 | 20 | 67 | 630 | 98 | 710 | 1.94e-77 | 267 |
Msa0097310 | AT5G44530.2 | 30.997 | 742 | 406 | 28 | 39 | 699 | 80 | 796 | 1.41e-76 | 265 |
Msa0097310 | AT5G44530.3 | 31.509 | 530 | 306 | 20 | 39 | 520 | 80 | 600 | 1.04e-54 | 199 |
Msa0097310 | AT5G59110.1 | 39.548 | 177 | 94 | 4 | 591 | 766 | 2 | 166 | 5.10e-31 | 120 |
Msa0097310 | AT1G32980.1 | 37.879 | 198 | 107 | 5 | 539 | 735 | 3 | 185 | 4.09e-30 | 118 |
Find 168 sgRNAs with CRISPR-Local
Find 398 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCAGCTACTCCCTTTGATTT+TGG | 0.109596 | 1_3:+3118730 | Msa0097310:CDS |
GATTCTGTTGTTTCATCTAT+TGG | 0.161412 | 1_3:-3117539 | None:intergenic |
ATCTTCGGTGTTAAACTATT+TGG | 0.203516 | 1_3:-3118433 | None:intergenic |
AGGTGATCAGTGAATGTTTC+TGG | 0.210634 | 1_3:-3117080 | None:intergenic |
GGTTTAGCTGCTATAGTTAA+AGG | 0.248373 | 1_3:+3118601 | Msa0097310:CDS |
ATTCTGTTGTTTCATCTATT+GGG | 0.253852 | 1_3:-3117538 | None:intergenic |
TTAACAAGTTCAAAAGTTAT+AGG | 0.270427 | 1_3:+3118124 | Msa0097310:CDS |
TTGAAAGTGTTTCGGCTTCT+TGG | 0.279593 | 1_3:-3117202 | None:intergenic |
CAACAAAGTCAAGTAATTAT+TGG | 0.281099 | 1_3:+3117338 | Msa0097310:CDS |
CTGATACGAAGTGTAGTTTA+AGG | 0.283901 | 1_3:-3118839 | None:intergenic |
CATTCACTGATCACCTTAAC+TGG | 0.287049 | 1_3:+3117087 | Msa0097310:CDS |
ATTTGTGGCTCAATGCCTTC+TGG | 0.287369 | 1_3:+3119162 | Msa0097310:CDS |
TTTGAACTTGTTAAAGAATC+AGG | 0.291151 | 1_3:-3118115 | None:intergenic |
CATACACCTTTCCAGTTACT+TGG | 0.300133 | 1_3:-3117425 | None:intergenic |
GTATTCTTGACACTGGTATA+TGG | 0.300596 | 1_3:+3117360 | Msa0097310:CDS |
TGGTGGAATTGGAATGATTT+TGG | 0.301625 | 1_3:+3118213 | Msa0097310:CDS |
CGATAATTGTTGAATACAAT+AGG | 0.303113 | 1_3:+3118992 | Msa0097310:CDS |
TTGGAAACTGCTTCGGGAAT+TGG | 0.308269 | 1_3:+3118952 | Msa0097310:CDS |
AGCTTATTCGGTTTAGCTTC+TGG | 0.308814 | 1_3:+3117638 | Msa0097310:CDS |
GTGAATTTCAACATTATATC+AGG | 0.331745 | 1_3:+3118550 | Msa0097310:CDS |
GTAGCAGAAGCTAGCTTATT+CGG | 0.338156 | 1_3:+3117626 | Msa0097310:CDS |
GGTAGCAATGAATCAGTTAA+AGG | 0.339754 | 1_3:-3118040 | None:intergenic |
CCTTCTGGAACTAAGAGTTT+TGG | 0.342641 | 1_3:+3119177 | Msa0097310:CDS |
TGTTGCTTTGGAAACTGCTT+CGG | 0.342679 | 1_3:+3118945 | Msa0097310:CDS |
CCTTTCCAGTTACTTGGTAT+TGG | 0.343344 | 1_3:-3117419 | None:intergenic |
CTATTGTATTCAACAATTAT+CGG | 0.355618 | 1_3:-3118991 | None:intergenic |
CCTGTATCTGCCCTTGATCC+TGG | 0.374211 | 1_3:+3118769 | Msa0097310:CDS |
TTGGTCCAATACCAAGTAAC+TGG | 0.380238 | 1_3:+3117414 | Msa0097310:CDS |
AAAGGGAGTAGCTGGTTTCC+CGG | 0.390868 | 1_3:-3118722 | None:intergenic |
CAAGTCCAACTAAATGCAAT+TGG | 0.390890 | 1_3:-3119240 | None:intergenic |
AACACCGAAGATTCTTAAAC+CGG | 0.403134 | 1_3:+3118444 | Msa0097310:CDS |
GGAGTCCAATTGCATTTAGT+TGG | 0.404322 | 1_3:+3119235 | Msa0097310:CDS |
TAAGGAGGTGTATGAGAAGA+AGG | 0.408200 | 1_3:+3119122 | Msa0097310:CDS |
ATAGCAGCAGGGCTCCATTC+GGG | 0.410860 | 1_3:-3118631 | None:intergenic |
GTTGCTTTGGAAACTGCTTC+GGG | 0.416721 | 1_3:+3118946 | Msa0097310:CDS |
TGATGAATTCATGTTGTTAC+CGG | 0.417719 | 1_3:-3117453 | None:intergenic |
GCGATGTGTCGAACCAGTTA+AGG | 0.422439 | 1_3:-3117100 | None:intergenic |
TACAAAGTGTGCTGGCTTAG+TGG | 0.424454 | 1_3:+3117701 | Msa0097310:CDS |
ACTGGTGCGGTTGGTCCAAC+CGG | 0.424860 | 1_3:+3118505 | Msa0097310:CDS |
TATAGCAGCAGGGCTCCATT+CGG | 0.425762 | 1_3:-3118632 | None:intergenic |
AGTTATATAACACTTGGAAA+TGG | 0.427001 | 1_3:+3117980 | Msa0097310:CDS |
GATAATTGTTGAATACAATA+GGG | 0.430834 | 1_3:+3118993 | Msa0097310:CDS |
ACAATTGTAGATGTTGCAAC+CGG | 0.431910 | 1_3:+3118703 | Msa0097310:CDS |
TACAGAGACATCATTGCAAT+TGG | 0.432053 | 1_3:+3117821 | Msa0097310:CDS |
ACTGAAGCATTATAAGTTCC+CGG | 0.437567 | 1_3:-3119036 | None:intergenic |
AATGGAGCCCTGCTGCTATA+CGG | 0.438332 | 1_3:+3118635 | Msa0097310:CDS |
GGCTATTTGGAATGGAATGA+TGG | 0.439878 | 1_3:+3119198 | Msa0097310:CDS |
GTTTCATCTTCAGCAGGAAA+TGG | 0.440416 | 1_3:+3117875 | Msa0097310:CDS |
GTGATGCAAGGAAGAAATAC+AGG | 0.441085 | 1_3:+3118893 | Msa0097310:CDS |
AAAATCGCGGTCAATTGTTC+CGG | 0.447700 | 1_3:-3117954 | None:intergenic |
TTTGACAAGCTTTCAGCACT+TGG | 0.448490 | 1_3:-3117902 | None:intergenic |
ATCAACGTCGATGACTATCT+TGG | 0.452328 | 1_3:+3118805 | Msa0097310:CDS |
TGGAAACTCAAGAGTTGAAA+AGG | 0.452364 | 1_3:+3118171 | Msa0097310:CDS |
TTCACTTCAGACATAGCTGC+TGG | 0.452806 | 1_3:+3117728 | Msa0097310:CDS |
TGGAAAGGTGTATGTGAAAC+CGG | 0.454442 | 1_3:+3117434 | Msa0097310:CDS |
AAATCCGGTTTAAGAATCTT+CGG | 0.457772 | 1_3:-3118448 | None:intergenic |
GGTGGATTCTTCGTCGGTGA+AGG | 0.457834 | 1_3:+3119071 | Msa0097310:CDS |
AATGTTAGTGATTCCTCAGT+TGG | 0.458572 | 1_3:+3118079 | Msa0097310:CDS |
GGTGAAGGTTGTGGTGGAAC+CGG | 0.458748 | 1_3:+3119086 | Msa0097310:CDS |
CCAAAATCAAAGGGAGTAGC+TGG | 0.462630 | 1_3:-3118730 | None:intergenic |
GTGTTCTTGTTGTGTGAAGT+TGG | 0.463289 | 1_3:-3117265 | None:intergenic |
ACCAACCGCACCAGTCCAAC+CGG | 0.463344 | 1_3:-3118497 | None:intergenic |
CCGGCTTAGCTCTTGATAAG+AGG | 0.466456 | 1_3:+3118524 | Msa0097310:CDS |
ACAAGAACACCACAGTTCCT+TGG | 0.468381 | 1_3:+3117278 | Msa0097310:CDS |
TTTCCAAGTGTTATATAACT+AGG | 0.471992 | 1_3:-3117977 | None:intergenic |
TTGGTAAACAATGAAGCATA+TGG | 0.474801 | 1_3:+3118232 | Msa0097310:CDS |
ACACCGGGAGCTATTAAATC+CGG | 0.475696 | 1_3:-3118463 | None:intergenic |
TGAAGTTGGTATCTAAGTTC+AGG | 0.477951 | 1_3:-3117251 | None:intergenic |
GGTATAACATCGAGAATTCC+CGG | 0.483240 | 1_3:-3117230 | None:intergenic |
CATAAACAAGACCAGGATCA+AGG | 0.483270 | 1_3:-3118780 | None:intergenic |
TTGCTACCACTTGTTTATGC+AGG | 0.483986 | 1_3:+3118055 | Msa0097310:CDS |
AGAAGAAGGTTTATAAAGTG+AGG | 0.484295 | 1_3:+3119136 | Msa0097310:CDS |
ATTCTAGTTTCATCTTCAGC+AGG | 0.486932 | 1_3:+3117869 | Msa0097310:CDS |
TCTTCTACCAGCAGCAGCAT+TGG | 0.488105 | 1_3:+3118279 | Msa0097310:CDS |
GCCGGTTGGACTGGTGCGGT+TGG | 0.491642 | 1_3:+3118496 | Msa0097310:CDS |
CGAAACACTTTCAAAACAGC+CGG | 0.492606 | 1_3:+3117211 | Msa0097310:CDS |
CCTCTTATCAAGAGCTAAGC+CGG | 0.497393 | 1_3:-3118524 | None:intergenic |
TCTTACAAACGTGGGAACTC+CGG | 0.499363 | 1_3:+3119017 | Msa0097310:CDS |
CCAGGATCAAGGGCAGATAC+AGG | 0.500353 | 1_3:-3118769 | None:intergenic |
GAAACTGCTTCGGGAATTGG+TGG | 0.502307 | 1_3:+3118955 | Msa0097310:CDS |
GTCAATTGTTCCGGCACCAA+CGG | 0.507415 | 1_3:-3117945 | None:intergenic |
TTCTTCGTCGGTGAAGGTTG+TGG | 0.515278 | 1_3:+3119077 | Msa0097310:CDS |
CTTACAAACGTGGGAACTCC+GGG | 0.518280 | 1_3:+3119018 | Msa0097310:CDS |
AATGATGGGAAGCATAAGGT+TGG | 0.520017 | 1_3:+3119213 | Msa0097310:CDS |
ATGATGGGAAGCATAAGGTT+GGG | 0.520682 | 1_3:+3119214 | Msa0097310:CDS |
TTCAGACATAGCTGCTGGAA+TGG | 0.521644 | 1_3:+3117733 | Msa0097310:CDS |
TCCAAAGCAACAGCAAAAGA+AGG | 0.523715 | 1_3:-3118934 | None:intergenic |
AGTGCTGACCGTATAGCAGC+AGG | 0.524204 | 1_3:-3118643 | None:intergenic |
TATAAAGTGAGGTTTATTTG+TGG | 0.524824 | 1_3:+3119147 | Msa0097310:CDS |
TTTCCTAGTTATATAACACT+TGG | 0.527406 | 1_3:+3117974 | Msa0097310:CDS |
CTTCTACCAGCAGCAGCATT+GGG | 0.527599 | 1_3:+3118280 | Msa0097310:CDS |
TGGATAACAACCGTTGGTGC+CGG | 0.538077 | 1_3:+3117935 | Msa0097310:CDS |
GTCATCGGTGGATTCTTCGT+CGG | 0.538843 | 1_3:+3119065 | Msa0097310:CDS |
TCCTTAAAACTAATAGTCTC+CGG | 0.539473 | 1_3:-3119105 | None:intergenic |
ACTGCTTCGGGAATTGGTGG+TGG | 0.540817 | 1_3:+3118958 | Msa0097310:CDS |
ATGTTAGTGATTCCTCAGTT+GGG | 0.541062 | 1_3:+3118080 | Msa0097310:CDS |
AGCTTAGATGACACAGGACT+TGG | 0.541610 | 1_3:+3117395 | Msa0097310:CDS |
GCACCAACGGTTGTTATCCA+TGG | 0.543316 | 1_3:-3117932 | None:intergenic |
AAACCGGATTTAATAGCTCC+CGG | 0.547291 | 1_3:+3118460 | Msa0097310:CDS |
GAACTGAATGCTGCTACCAC+TGG | 0.548090 | 1_3:-3118403 | None:intergenic |
ATTATTGGTATTCTTGACAC+TGG | 0.549582 | 1_3:+3117353 | Msa0097310:CDS |
TCGCGGCTTACAAAGTGTGC+TGG | 0.550855 | 1_3:+3117693 | Msa0097310:CDS |
TTAAAGGTGCTTACCCCGAA+TGG | 0.551612 | 1_3:+3118617 | Msa0097310:CDS |
ACATACAAACACATAGCTCA+TGG | 0.551792 | 1_3:+3117158 | Msa0097310:CDS |
CACTGCAACAGAAAACTCAT+AGG | 0.553279 | 1_3:+3117476 | Msa0097310:CDS |
ATCAGTGAATGTTTCTGGCA+TGG | 0.556012 | 1_3:-3117075 | None:intergenic |
GAGAGTTTACTTGTGATGCA+AGG | 0.557581 | 1_3:+3118881 | Msa0097310:CDS |
GCTTTCACAGCAATGTCTCA+TGG | 0.557846 | 1_3:+3117845 | Msa0097310:CDS |
TGACCAGATCCAAAATCAAA+GGG | 0.557897 | 1_3:-3118739 | None:intergenic |
GTCTACAGAAGCGCGTGTCG+CGG | 0.560507 | 1_3:+3117676 | Msa0097310:CDS |
GGAAACTCAAGAGTTGAAAA+GGG | 0.567502 | 1_3:+3118172 | Msa0097310:CDS |
GTGACCAGATCCAAAATCAA+AGG | 0.568440 | 1_3:-3118740 | None:intergenic |
AAAGGGTATGAAGCAGCACT+TGG | 0.568961 | 1_3:+3117515 | Msa0097310:CDS |
AAATCAGCTAGAGATGATGA+TGG | 0.570145 | 1_3:+3117563 | Msa0097310:CDS |
TCATCTTCAGCAGGAAATGG+TGG | 0.571086 | 1_3:+3117878 | Msa0097310:CDS |
TGCTTCAGTGGTGTTGTCAT+CGG | 0.571470 | 1_3:+3119050 | Msa0097310:CDS |
TTAGCTTCTGGTACAGCAAG+AGG | 0.571516 | 1_3:+3117650 | Msa0097310:CDS |
GTCCATCGGTGGGAGCATGA+TGG | 0.571671 | 1_3:+3117793 | Msa0097310:CDS |
CACACATTAACAACAGCAGC+AGG | 0.573163 | 1_3:+3117596 | Msa0097310:CDS |
TTATCAAGAGCTAAGCCGGT+TGG | 0.573292 | 1_3:-3118520 | None:intergenic |
ATCCATCATGCTCCCACCGA+TGG | 0.575947 | 1_3:-3117795 | None:intergenic |
GCTATTTGGAATGGAATGAT+GGG | 0.577630 | 1_3:+3119199 | Msa0097310:CDS |
ATGGAATGATGGGAAGCATA+AGG | 0.577925 | 1_3:+3119209 | Msa0097310:CDS |
TTCTTGGTTAGTTAGTCTTG+TGG | 0.579365 | 1_3:-3117186 | None:intergenic |
CAATAGGGTTCTTACAAACG+TGG | 0.583115 | 1_3:+3119008 | Msa0097310:CDS |
TTCGTCGGTGAAGGTTGTGG+TGG | 0.587445 | 1_3:+3119080 | Msa0097310:CDS |
ATAAACAAGACCAGGATCAA+GGG | 0.591716 | 1_3:-3118779 | None:intergenic |
GTAGCAGCATTCAGTTCAAG+AGG | 0.593998 | 1_3:+3118409 | Msa0097310:CDS |
ATCTTATCGATGTCCATCGG+TGG | 0.594460 | 1_3:+3117782 | Msa0097310:CDS |
TTTAGCCGGTTGGACTGGTG+CGG | 0.595588 | 1_3:+3118492 | Msa0097310:CDS |
CCAAAACTCTTAGTTCCAGA+AGG | 0.602325 | 1_3:-3119177 | None:intergenic |
CCGGCTAAAATGTTTACACC+GGG | 0.602678 | 1_3:-3118478 | None:intergenic |
TTCAGTGGTGTTGTCATCGG+TGG | 0.603360 | 1_3:+3119053 | Msa0097310:CDS |
TGACTTTGTTGTCTAGAGTG+AGG | 0.605702 | 1_3:-3117326 | None:intergenic |
ACCGGCTAAAATGTTTACAC+CGG | 0.608297 | 1_3:-3118479 | None:intergenic |
TAGCAGCAGGGCTCCATTCG+GGG | 0.609527 | 1_3:-3118630 | None:intergenic |
AAAATTGTGATATGTGAAAG+AGG | 0.610230 | 1_3:+3118148 | Msa0097310:CDS |
ATGTCATGTCCTCACGCGAG+TGG | 0.613061 | 1_3:+3118580 | Msa0097310:CDS |
CAATTGTAGATGTTGCAACC+GGG | 0.615237 | 1_3:+3118704 | Msa0097310:CDS |
AACATCTTATCGATGTCCAT+CGG | 0.617399 | 1_3:+3117779 | Msa0097310:CDS |
TGCTGAAAGCTTGTCAAATG+TGG | 0.618029 | 1_3:+3117907 | Msa0097310:CDS |
ATGGATAAAGCTATAGAAGA+CGG | 0.621009 | 1_3:+3117752 | Msa0097310:CDS |
ACATTACCTGCATAAACAAG+TGG | 0.621072 | 1_3:-3118061 | None:intergenic |
CCAATACCAAGTAACTGGAA+AGG | 0.624680 | 1_3:+3117419 | Msa0097310:CDS |
GCTAGAGATGATGATGGACA+TGG | 0.627265 | 1_3:+3117569 | Msa0097310:CDS |
GCTTGTCAAATGTGGCACCA+TGG | 0.628234 | 1_3:+3117915 | Msa0097310:CDS |
TCTTATCGATGTCCATCGGT+GGG | 0.630545 | 1_3:+3117783 | Msa0097310:CDS |
GGGAACTTATAATGCTTCAG+TGG | 0.630760 | 1_3:+3119038 | Msa0097310:CDS |
GAAACACTTTCAAAACAGCC+GGG | 0.640013 | 1_3:+3117212 | Msa0097310:CDS |
ACAGAAAACTCATAGGTGCA+AGG | 0.641137 | 1_3:+3117483 | Msa0097310:CDS |
AGTGAATGTTTCTGGCATGG+TGG | 0.641351 | 1_3:-3117072 | None:intergenic |
TTGATGTCATAAACAAGACC+AGG | 0.651872 | 1_3:-3118787 | None:intergenic |
GTGCTGACCGTATAGCAGCA+GGG | 0.654668 | 1_3:-3118642 | None:intergenic |
ACAAGTTCAACCTTCACCAG+TGG | 0.655564 | 1_3:+3118387 | Msa0097310:CDS |
AAACACATACATAATTCACA+TGG | 0.656591 | 1_3:+3117043 | Msa0097310:CDS |
ACTCGCGTGAGGACATGACA+TGG | 0.656672 | 1_3:-3118578 | None:intergenic |
AATAGGGTTCTTACAAACGT+GGG | 0.661504 | 1_3:+3119009 | Msa0097310:CDS |
TTTGTACGAGGTGTATGCTG+TGG | 0.671813 | 1_3:-3118671 | None:intergenic |
TGATGCAAGGAAGAAATACA+GGG | 0.674984 | 1_3:+3118894 | Msa0097310:CDS |
ACTGGTGCATCACTTTACAG+TGG | 0.678217 | 1_3:+3118013 | Msa0097310:CDS |
AATGCTGCTACCACTGGTGA+AGG | 0.679217 | 1_3:-3118397 | None:intergenic |
GCAGCTAAACCACTCGCGTG+AGG | 0.682555 | 1_3:-3118589 | None:intergenic |
TTTGGCAAACCAAGGAACTG+TGG | 0.689360 | 1_3:-3117287 | None:intergenic |
TTATATAACTAGGAAAATCG+CGG | 0.698687 | 1_3:-3117967 | None:intergenic |
ATCAGATCAAACTTGCTGCG+AGG | 0.707097 | 1_3:+3118857 | Msa0097310:CDS |
GCACCATGGATAACAACCGT+TGG | 0.713041 | 1_3:+3117929 | Msa0097310:CDS |
ATTGTGATATGTGAAAGAGG+TGG | 0.737979 | 1_3:+3118151 | Msa0097310:CDS |
TATACAAAGATACCCAACTG+AGG | 0.743432 | 1_3:-3118092 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TTAACAAGTTCAAAAGTTAT+AGG | + | chr1_3:3118124-3118143 | Msa0097310:CDS | 20.0% |
!! | CTATTGTATTCAACAATTAT+CGG | - | chr1_3:3118994-3119013 | None:intergenic | 20.0% |
!! | GATAATTGTTGAATACAATA+GGG | + | chr1_3:3118993-3119012 | Msa0097310:CDS | 20.0% |
!! | TTAACAAGTTCAAAAGTTAT+AGG | + | chr1_3:3118124-3118143 | Msa0097310:CDS | 20.0% |
!! | CTATTGTATTCAACAATTAT+CGG | - | chr1_3:3118994-3119013 | None:intergenic | 20.0% |
!! | GATAATTGTTGAATACAATA+GGG | + | chr1_3:3118993-3119012 | Msa0097310:CDS | 20.0% |
!!! | ATGTATGTGTTTTTTGTTTG+TGG | - | chr1_3:3117035-3117054 | None:intergenic | 25.0% |
! | AAACACATACATAATTCACA+TGG | + | chr1_3:3117043-3117062 | Msa0097310:CDS | 25.0% |
! | CAACAAAGTCAAGTAATTAT+TGG | + | chr1_3:3117338-3117357 | Msa0097310:CDS | 25.0% |
!!! | ATTCTGTTGTTTCATCTATT+GGG | - | chr1_3:3117541-3117560 | None:intergenic | 25.0% |
! | TTATATAACTAGGAAAATCG+CGG | - | chr1_3:3117970-3117989 | None:intergenic | 25.0% |
! | TTTCCTAGTTATATAACACT+TGG | + | chr1_3:3117974-3117993 | Msa0097310:CDS | 25.0% |
! | TTTCCAAGTGTTATATAACT+AGG | - | chr1_3:3117980-3117999 | None:intergenic | 25.0% |
! | AGTTATATAACACTTGGAAA+TGG | + | chr1_3:3117980-3117999 | Msa0097310:CDS | 25.0% |
!!! | TTTGAACTTGTTAAAGAATC+AGG | - | chr1_3:3118118-3118137 | None:intergenic | 25.0% |
! | AAAATTGTGATATGTGAAAG+AGG | + | chr1_3:3118148-3118167 | Msa0097310:CDS | 25.0% |
! | GTGAATTTCAACATTATATC+AGG | + | chr1_3:3118550-3118569 | Msa0097310:CDS | 25.0% |
! | CGATAATTGTTGAATACAAT+AGG | + | chr1_3:3118992-3119011 | Msa0097310:CDS | 25.0% |
! | TATAAAGTGAGGTTTATTTG+TGG | + | chr1_3:3119147-3119166 | Msa0097310:CDS | 25.0% |
!!! | ATGTATGTGTTTTTTGTTTG+TGG | - | chr1_3:3117035-3117054 | None:intergenic | 25.0% |
! | AAACACATACATAATTCACA+TGG | + | chr1_3:3117043-3117062 | Msa0097310:CDS | 25.0% |
! | CAACAAAGTCAAGTAATTAT+TGG | + | chr1_3:3117338-3117357 | Msa0097310:CDS | 25.0% |
!!! | ATTCTGTTGTTTCATCTATT+GGG | - | chr1_3:3117541-3117560 | None:intergenic | 25.0% |
! | TTATATAACTAGGAAAATCG+CGG | - | chr1_3:3117970-3117989 | None:intergenic | 25.0% |
! | TTTCCTAGTTATATAACACT+TGG | + | chr1_3:3117974-3117993 | Msa0097310:CDS | 25.0% |
! | TTTCCAAGTGTTATATAACT+AGG | - | chr1_3:3117980-3117999 | None:intergenic | 25.0% |
! | AGTTATATAACACTTGGAAA+TGG | + | chr1_3:3117980-3117999 | Msa0097310:CDS | 25.0% |
!!! | TTTGAACTTGTTAAAGAATC+AGG | - | chr1_3:3118118-3118137 | None:intergenic | 25.0% |
! | AAAATTGTGATATGTGAAAG+AGG | + | chr1_3:3118148-3118167 | Msa0097310:CDS | 25.0% |
! | GTGAATTTCAACATTATATC+AGG | + | chr1_3:3118550-3118569 | Msa0097310:CDS | 25.0% |
! | CGATAATTGTTGAATACAAT+AGG | + | chr1_3:3118992-3119011 | Msa0097310:CDS | 25.0% |
! | TATAAAGTGAGGTTTATTTG+TGG | + | chr1_3:3119147-3119166 | Msa0097310:CDS | 25.0% |
!!! | GTTTTTTGTTTGTGGTGTTT+TGG | - | chr1_3:3117027-3117046 | None:intergenic | 30.0% |
!!! | GGTAAAAGAGTGTTTGTTTT+TGG | - | chr1_3:3117308-3117327 | None:intergenic | 30.0% |
ATTATTGGTATTCTTGACAC+TGG | + | chr1_3:3117353-3117372 | Msa0097310:CDS | 30.0% | |
TGATGAATTCATGTTGTTAC+CGG | - | chr1_3:3117456-3117475 | None:intergenic | 30.0% | |
! | GTGCAAGGTTTTTCTTAAAA+GGG | + | chr1_3:3117498-3117517 | Msa0097310:CDS | 30.0% |
!! | GATTCTGTTGTTTCATCTAT+TGG | - | chr1_3:3117542-3117561 | None:intergenic | 30.0% |
ATGGATAAAGCTATAGAAGA+CGG | + | chr1_3:3117752-3117771 | Msa0097310:CDS | 30.0% | |
TTGGTAAACAATGAAGCATA+TGG | + | chr1_3:3118232-3118251 | Msa0097310:CDS | 30.0% | |
!! | CAAGAGCTAAACTTGTTTTT+GGG | + | chr1_3:3118353-3118372 | Msa0097310:CDS | 30.0% |
!!! | AAGAGCTAAACTTGTTTTTG+GGG | + | chr1_3:3118354-3118373 | Msa0097310:CDS | 30.0% |
!! | ATCTTCGGTGTTAAACTATT+TGG | - | chr1_3:3118436-3118455 | None:intergenic | 30.0% |
AAATCCGGTTTAAGAATCTT+CGG | - | chr1_3:3118451-3118470 | None:intergenic | 30.0% | |
TCCTTAAAACTAATAGTCTC+CGG | - | chr1_3:3119108-3119127 | None:intergenic | 30.0% | |
AGAAGAAGGTTTATAAAGTG+AGG | + | chr1_3:3119136-3119155 | Msa0097310:CDS | 30.0% | |
!!! | AACTAAGAGTTTTGGCTATT+TGG | + | chr1_3:3119185-3119204 | Msa0097310:CDS | 30.0% |
!!! | GTTTTTTGTTTGTGGTGTTT+TGG | - | chr1_3:3117027-3117046 | None:intergenic | 30.0% |
!!! | GGTAAAAGAGTGTTTGTTTT+TGG | - | chr1_3:3117308-3117327 | None:intergenic | 30.0% |
ATTATTGGTATTCTTGACAC+TGG | + | chr1_3:3117353-3117372 | Msa0097310:CDS | 30.0% | |
TGATGAATTCATGTTGTTAC+CGG | - | chr1_3:3117456-3117475 | None:intergenic | 30.0% | |
! | GTGCAAGGTTTTTCTTAAAA+GGG | + | chr1_3:3117498-3117517 | Msa0097310:CDS | 30.0% |
!! | GATTCTGTTGTTTCATCTAT+TGG | - | chr1_3:3117542-3117561 | None:intergenic | 30.0% |
ATGGATAAAGCTATAGAAGA+CGG | + | chr1_3:3117752-3117771 | Msa0097310:CDS | 30.0% | |
TTGGTAAACAATGAAGCATA+TGG | + | chr1_3:3118232-3118251 | Msa0097310:CDS | 30.0% | |
!! | CAAGAGCTAAACTTGTTTTT+GGG | + | chr1_3:3118353-3118372 | Msa0097310:CDS | 30.0% |
!!! | AAGAGCTAAACTTGTTTTTG+GGG | + | chr1_3:3118354-3118373 | Msa0097310:CDS | 30.0% |
!! | ATCTTCGGTGTTAAACTATT+TGG | - | chr1_3:3118436-3118455 | None:intergenic | 30.0% |
AAATCCGGTTTAAGAATCTT+CGG | - | chr1_3:3118451-3118470 | None:intergenic | 30.0% | |
TCCTTAAAACTAATAGTCTC+CGG | - | chr1_3:3119108-3119127 | None:intergenic | 30.0% | |
AGAAGAAGGTTTATAAAGTG+AGG | + | chr1_3:3119136-3119155 | Msa0097310:CDS | 30.0% | |
!!! | AACTAAGAGTTTTGGCTATT+TGG | + | chr1_3:3119185-3119204 | Msa0097310:CDS | 30.0% |
ACATACAAACACATAGCTCA+TGG | + | chr1_3:3117158-3117177 | Msa0097310:CDS | 35.0% | |
!! | TTCTTGGTTAGTTAGTCTTG+TGG | - | chr1_3:3117189-3117208 | None:intergenic | 35.0% |
!! | TGAAGTTGGTATCTAAGTTC+AGG | - | chr1_3:3117254-3117273 | None:intergenic | 35.0% |
!!! | TGTTTGTTTTTGGCAAACCA+AGG | - | chr1_3:3117298-3117317 | None:intergenic | 35.0% |
GTATTCTTGACACTGGTATA+TGG | + | chr1_3:3117360-3117379 | Msa0097310:CDS | 35.0% | |
!!! | TCATCTAAGCTTTTTAGCTC+TGG | - | chr1_3:3117386-3117405 | None:intergenic | 35.0% |
CTAAAAAGCTTAGATGACAC+AGG | + | chr1_3:3117389-3117408 | Msa0097310:CDS | 35.0% | |
! | GGTGCAAGGTTTTTCTTAAA+AGG | + | chr1_3:3117497-3117516 | Msa0097310:CDS | 35.0% |
AAATCAGCTAGAGATGATGA+TGG | + | chr1_3:3117563-3117582 | Msa0097310:CDS | 35.0% | |
AACATCTTATCGATGTCCAT+CGG | + | chr1_3:3117779-3117798 | Msa0097310:CDS | 35.0% | |
TACAGAGACATCATTGCAAT+TGG | + | chr1_3:3117821-3117840 | Msa0097310:CDS | 35.0% | |
!! | ATTCTAGTTTCATCTTCAGC+AGG | + | chr1_3:3117869-3117888 | Msa0097310:CDS | 35.0% |
GGAAATGGAAAAACTTACAC+TGG | + | chr1_3:3117995-3118014 | Msa0097310:CDS | 35.0% | |
GGTAGCAATGAATCAGTTAA+AGG | - | chr1_3:3118043-3118062 | None:intergenic | 35.0% | |
ACATTACCTGCATAAACAAG+TGG | - | chr1_3:3118064-3118083 | None:intergenic | 35.0% | |
AATGTTAGTGATTCCTCAGT+TGG | + | chr1_3:3118079-3118098 | Msa0097310:CDS | 35.0% | |
ATGTTAGTGATTCCTCAGTT+GGG | + | chr1_3:3118080-3118099 | Msa0097310:CDS | 35.0% | |
TATACAAAGATACCCAACTG+AGG | - | chr1_3:3118095-3118114 | None:intergenic | 35.0% | |
ATTGTGATATGTGAAAGAGG+TGG | + | chr1_3:3118151-3118170 | Msa0097310:CDS | 35.0% | |
TGGAAACTCAAGAGTTGAAA+AGG | + | chr1_3:3118171-3118190 | Msa0097310:CDS | 35.0% | |
GGAAACTCAAGAGTTGAAAA+GGG | + | chr1_3:3118172-3118191 | Msa0097310:CDS | 35.0% | |
!! | GGTCTTGTTGTAAAAAAAGC+TGG | + | chr1_3:3118193-3118212 | Msa0097310:CDS | 35.0% |
! | CTTGTTGTAAAAAAAGCTGG+TGG | + | chr1_3:3118196-3118215 | Msa0097310:CDS | 35.0% |
GTAAAAAAAGCTGGTGGAAT+TGG | + | chr1_3:3118202-3118221 | Msa0097310:CDS | 35.0% | |
! | TGGTGGAATTGGAATGATTT+TGG | + | chr1_3:3118213-3118232 | Msa0097310:CDS | 35.0% |
!! | CCAAAAACAAGTTTAGCTCT+TGG | - | chr1_3:3118355-3118374 | None:intergenic | 35.0% |
!! | CCAAGAGCTAAACTTGTTTT+TGG | + | chr1_3:3118352-3118371 | Msa0097310:CDS | 35.0% |
!!! | AGAGCTAAACTTGTTTTTGG+GGG | + | chr1_3:3118355-3118374 | Msa0097310:CDS | 35.0% |
AACACCGAAGATTCTTAAAC+CGG | + | chr1_3:3118444-3118463 | Msa0097310:CDS | 35.0% | |
GGTTTAGCTGCTATAGTTAA+AGG | + | chr1_3:3118601-3118620 | Msa0097310:CDS | 35.0% | |
ACAATTGTAGATGTTGCAAC+CGG | + | chr1_3:3118703-3118722 | Msa0097310:CDS | 35.0% | |
TGACCAGATCCAAAATCAAA+GGG | - | chr1_3:3118742-3118761 | None:intergenic | 35.0% | |
ATAAACAAGACCAGGATCAA+GGG | - | chr1_3:3118782-3118801 | None:intergenic | 35.0% | |
TTGATGTCATAAACAAGACC+AGG | - | chr1_3:3118790-3118809 | None:intergenic | 35.0% | |
CTGATACGAAGTGTAGTTTA+AGG | - | chr1_3:3118842-3118861 | None:intergenic | 35.0% | |
TGATGCAAGGAAGAAATACA+GGG | + | chr1_3:3118894-3118913 | Msa0097310:CDS | 35.0% | |
AATAGGGTTCTTACAAACGT+GGG | + | chr1_3:3119009-3119028 | Msa0097310:CDS | 35.0% | |
! | ACTGAAGCATTATAAGTTCC+CGG | - | chr1_3:3119039-3119058 | None:intergenic | 35.0% |
!!! | ACCGGAGACTATTAGTTTTA+AGG | + | chr1_3:3119104-3119123 | Msa0097310:CDS | 35.0% |
!!! | GGAGACTATTAGTTTTAAGG+AGG | + | chr1_3:3119107-3119126 | Msa0097310:CDS | 35.0% |
!!! | AGAGTTTTGGCTATTTGGAA+TGG | + | chr1_3:3119190-3119209 | Msa0097310:CDS | 35.0% |
! | GCTATTTGGAATGGAATGAT+GGG | + | chr1_3:3119199-3119218 | Msa0097310:CDS | 35.0% |
CAAGTCCAACTAAATGCAAT+TGG | - | chr1_3:3119243-3119262 | None:intergenic | 35.0% | |
ACATACAAACACATAGCTCA+TGG | + | chr1_3:3117158-3117177 | Msa0097310:CDS | 35.0% | |
!! | TTCTTGGTTAGTTAGTCTTG+TGG | - | chr1_3:3117189-3117208 | None:intergenic | 35.0% |
!! | TGAAGTTGGTATCTAAGTTC+AGG | - | chr1_3:3117254-3117273 | None:intergenic | 35.0% |
!!! | TGTTTGTTTTTGGCAAACCA+AGG | - | chr1_3:3117298-3117317 | None:intergenic | 35.0% |
GTATTCTTGACACTGGTATA+TGG | + | chr1_3:3117360-3117379 | Msa0097310:CDS | 35.0% | |
!!! | TCATCTAAGCTTTTTAGCTC+TGG | - | chr1_3:3117386-3117405 | None:intergenic | 35.0% |
CTAAAAAGCTTAGATGACAC+AGG | + | chr1_3:3117389-3117408 | Msa0097310:CDS | 35.0% | |
! | GGTGCAAGGTTTTTCTTAAA+AGG | + | chr1_3:3117497-3117516 | Msa0097310:CDS | 35.0% |
AAATCAGCTAGAGATGATGA+TGG | + | chr1_3:3117563-3117582 | Msa0097310:CDS | 35.0% | |
AACATCTTATCGATGTCCAT+CGG | + | chr1_3:3117779-3117798 | Msa0097310:CDS | 35.0% | |
TACAGAGACATCATTGCAAT+TGG | + | chr1_3:3117821-3117840 | Msa0097310:CDS | 35.0% | |
!! | ATTCTAGTTTCATCTTCAGC+AGG | + | chr1_3:3117869-3117888 | Msa0097310:CDS | 35.0% |
GGAAATGGAAAAACTTACAC+TGG | + | chr1_3:3117995-3118014 | Msa0097310:CDS | 35.0% | |
GGTAGCAATGAATCAGTTAA+AGG | - | chr1_3:3118043-3118062 | None:intergenic | 35.0% | |
ACATTACCTGCATAAACAAG+TGG | - | chr1_3:3118064-3118083 | None:intergenic | 35.0% | |
AATGTTAGTGATTCCTCAGT+TGG | + | chr1_3:3118079-3118098 | Msa0097310:CDS | 35.0% | |
ATGTTAGTGATTCCTCAGTT+GGG | + | chr1_3:3118080-3118099 | Msa0097310:CDS | 35.0% | |
TATACAAAGATACCCAACTG+AGG | - | chr1_3:3118095-3118114 | None:intergenic | 35.0% | |
ATTGTGATATGTGAAAGAGG+TGG | + | chr1_3:3118151-3118170 | Msa0097310:CDS | 35.0% | |
TGGAAACTCAAGAGTTGAAA+AGG | + | chr1_3:3118171-3118190 | Msa0097310:CDS | 35.0% | |
GGAAACTCAAGAGTTGAAAA+GGG | + | chr1_3:3118172-3118191 | Msa0097310:CDS | 35.0% | |
!! | GGTCTTGTTGTAAAAAAAGC+TGG | + | chr1_3:3118193-3118212 | Msa0097310:CDS | 35.0% |
! | CTTGTTGTAAAAAAAGCTGG+TGG | + | chr1_3:3118196-3118215 | Msa0097310:CDS | 35.0% |
GTAAAAAAAGCTGGTGGAAT+TGG | + | chr1_3:3118202-3118221 | Msa0097310:CDS | 35.0% | |
! | TGGTGGAATTGGAATGATTT+TGG | + | chr1_3:3118213-3118232 | Msa0097310:CDS | 35.0% |
!! | CCAAAAACAAGTTTAGCTCT+TGG | - | chr1_3:3118355-3118374 | None:intergenic | 35.0% |
!! | CCAAGAGCTAAACTTGTTTT+TGG | + | chr1_3:3118352-3118371 | Msa0097310:CDS | 35.0% |
!!! | AGAGCTAAACTTGTTTTTGG+GGG | + | chr1_3:3118355-3118374 | Msa0097310:CDS | 35.0% |
AACACCGAAGATTCTTAAAC+CGG | + | chr1_3:3118444-3118463 | Msa0097310:CDS | 35.0% | |
GGTTTAGCTGCTATAGTTAA+AGG | + | chr1_3:3118601-3118620 | Msa0097310:CDS | 35.0% | |
ACAATTGTAGATGTTGCAAC+CGG | + | chr1_3:3118703-3118722 | Msa0097310:CDS | 35.0% | |
TGACCAGATCCAAAATCAAA+GGG | - | chr1_3:3118742-3118761 | None:intergenic | 35.0% | |
ATAAACAAGACCAGGATCAA+GGG | - | chr1_3:3118782-3118801 | None:intergenic | 35.0% | |
TTGATGTCATAAACAAGACC+AGG | - | chr1_3:3118790-3118809 | None:intergenic | 35.0% | |
CTGATACGAAGTGTAGTTTA+AGG | - | chr1_3:3118842-3118861 | None:intergenic | 35.0% | |
TGATGCAAGGAAGAAATACA+GGG | + | chr1_3:3118894-3118913 | Msa0097310:CDS | 35.0% | |
AATAGGGTTCTTACAAACGT+GGG | + | chr1_3:3119009-3119028 | Msa0097310:CDS | 35.0% | |
! | ACTGAAGCATTATAAGTTCC+CGG | - | chr1_3:3119039-3119058 | None:intergenic | 35.0% |
!!! | ACCGGAGACTATTAGTTTTA+AGG | + | chr1_3:3119104-3119123 | Msa0097310:CDS | 35.0% |
!!! | GGAGACTATTAGTTTTAAGG+AGG | + | chr1_3:3119107-3119126 | Msa0097310:CDS | 35.0% |
!!! | AGAGTTTTGGCTATTTGGAA+TGG | + | chr1_3:3119190-3119209 | Msa0097310:CDS | 35.0% |
! | GCTATTTGGAATGGAATGAT+GGG | + | chr1_3:3119199-3119218 | Msa0097310:CDS | 35.0% |
CAAGTCCAACTAAATGCAAT+TGG | - | chr1_3:3119243-3119262 | None:intergenic | 35.0% | |
!! | ATCAGTGAATGTTTCTGGCA+TGG | - | chr1_3:3117078-3117097 | None:intergenic | 40.0% |
AGGTGATCAGTGAATGTTTC+TGG | - | chr1_3:3117083-3117102 | None:intergenic | 40.0% | |
CATTCACTGATCACCTTAAC+TGG | + | chr1_3:3117087-3117106 | Msa0097310:CDS | 40.0% | |
!! | TTGAAAGTGTTTCGGCTTCT+TGG | - | chr1_3:3117205-3117224 | None:intergenic | 40.0% |
!!! | CGGCTGTTTTGAAAGTGTTT+CGG | - | chr1_3:3117213-3117232 | None:intergenic | 40.0% |
CGAAACACTTTCAAAACAGC+CGG | + | chr1_3:3117211-3117230 | Msa0097310:CDS | 40.0% | |
GAAACACTTTCAAAACAGCC+GGG | + | chr1_3:3117212-3117231 | Msa0097310:CDS | 40.0% | |
GGTATAACATCGAGAATTCC+CGG | - | chr1_3:3117233-3117252 | None:intergenic | 40.0% | |
! | GTGTTCTTGTTGTGTGAAGT+TGG | - | chr1_3:3117268-3117287 | None:intergenic | 40.0% |
! | TGACTTTGTTGTCTAGAGTG+AGG | - | chr1_3:3117329-3117348 | None:intergenic | 40.0% |
TTGGTCCAATACCAAGTAAC+TGG | + | chr1_3:3117414-3117433 | Msa0097310:CDS | 40.0% | |
CCTTTCCAGTTACTTGGTAT+TGG | - | chr1_3:3117422-3117441 | None:intergenic | 40.0% | |
CCAATACCAAGTAACTGGAA+AGG | + | chr1_3:3117419-3117438 | Msa0097310:CDS | 40.0% | |
CATACACCTTTCCAGTTACT+TGG | - | chr1_3:3117428-3117447 | None:intergenic | 40.0% | |
! | TGGAAAGGTGTATGTGAAAC+CGG | + | chr1_3:3117434-3117453 | Msa0097310:CDS | 40.0% |
CACTGCAACAGAAAACTCAT+AGG | + | chr1_3:3117476-3117495 | Msa0097310:CDS | 40.0% | |
ACAGAAAACTCATAGGTGCA+AGG | + | chr1_3:3117483-3117502 | Msa0097310:CDS | 40.0% | |
! | GTAGCAGAAGCTAGCTTATT+CGG | + | chr1_3:3117626-3117645 | Msa0097310:CDS | 40.0% |
! | AGCTTATTCGGTTTAGCTTC+TGG | + | chr1_3:3117638-3117657 | Msa0097310:CDS | 40.0% |
GTTTCATCTTCAGCAGGAAA+TGG | + | chr1_3:3117875-3117894 | Msa0097310:CDS | 40.0% | |
TTTGACAAGCTTTCAGCACT+TGG | - | chr1_3:3117905-3117924 | None:intergenic | 40.0% | |
TGCTGAAAGCTTGTCAAATG+TGG | + | chr1_3:3117907-3117926 | Msa0097310:CDS | 40.0% | |
AAAATCGCGGTCAATTGTTC+CGG | - | chr1_3:3117957-3117976 | None:intergenic | 40.0% | |
TTGCTACCACTTGTTTATGC+AGG | + | chr1_3:3118055-3118074 | Msa0097310:CDS | 40.0% | |
AAACCGGATTTAATAGCTCC+CGG | + | chr1_3:3118460-3118479 | Msa0097310:CDS | 40.0% | |
ACCGGCTAAAATGTTTACAC+CGG | - | chr1_3:3118482-3118501 | None:intergenic | 40.0% | |
!! | GTGTAAACATTTTAGCCGGT+TGG | + | chr1_3:3118482-3118501 | Msa0097310:CDS | 40.0% |
GCATACACCTCGTACAAAAA+CGG | + | chr1_3:3118676-3118695 | Msa0097310:CDS | 40.0% | |
!! | TGTTTGTCCGTTTTTGTACG+AGG | - | chr1_3:3118686-3118705 | None:intergenic | 40.0% |
CAATTGTAGATGTTGCAACC+GGG | + | chr1_3:3118704-3118723 | Msa0097310:CDS | 40.0% | |
!! | ACTCCCTTTGATTTTGGATC+TGG | + | chr1_3:3118736-3118755 | Msa0097310:CDS | 40.0% |
GTGACCAGATCCAAAATCAA+AGG | - | chr1_3:3118743-3118762 | None:intergenic | 40.0% | |
CATAAACAAGACCAGGATCA+AGG | - | chr1_3:3118783-3118802 | None:intergenic | 40.0% | |
ATCAACGTCGATGACTATCT+TGG | + | chr1_3:3118805-3118824 | Msa0097310:CDS | 40.0% | |
GAGAGTTTACTTGTGATGCA+AGG | + | chr1_3:3118881-3118900 | Msa0097310:CDS | 40.0% | |
GTGATGCAAGGAAGAAATAC+AGG | + | chr1_3:3118893-3118912 | Msa0097310:CDS | 40.0% | |
!!! | TCCTTCTTTTGCTGTTGCTT+TGG | + | chr1_3:3118933-3118952 | Msa0097310:CDS | 40.0% |
TCCAAAGCAACAGCAAAAGA+AGG | - | chr1_3:3118937-3118956 | None:intergenic | 40.0% | |
!! | TGTTGCTTTGGAAACTGCTT+CGG | + | chr1_3:3118945-3118964 | Msa0097310:CDS | 40.0% |
CAATAGGGTTCTTACAAACG+TGG | + | chr1_3:3119008-3119027 | Msa0097310:CDS | 40.0% | |
GGGAACTTATAATGCTTCAG+TGG | + | chr1_3:3119038-3119057 | Msa0097310:CDS | 40.0% | |
! | TAAGGAGGTGTATGAGAAGA+AGG | + | chr1_3:3119122-3119141 | Msa0097310:CDS | 40.0% |
CCAAAACTCTTAGTTCCAGA+AGG | - | chr1_3:3119180-3119199 | None:intergenic | 40.0% | |
!!! | CCTTCTGGAACTAAGAGTTT+TGG | + | chr1_3:3119177-3119196 | Msa0097310:CDS | 40.0% |
! | GGCTATTTGGAATGGAATGA+TGG | + | chr1_3:3119198-3119217 | Msa0097310:CDS | 40.0% |
! | ATGGAATGATGGGAAGCATA+AGG | + | chr1_3:3119209-3119228 | Msa0097310:CDS | 40.0% |
! | AATGATGGGAAGCATAAGGT+TGG | + | chr1_3:3119213-3119232 | Msa0097310:CDS | 40.0% |
! | ATGATGGGAAGCATAAGGTT+GGG | + | chr1_3:3119214-3119233 | Msa0097310:CDS | 40.0% |
GGAGTCCAATTGCATTTAGT+TGG | + | chr1_3:3119235-3119254 | Msa0097310:CDS | 40.0% | |
!! | ATCAGTGAATGTTTCTGGCA+TGG | - | chr1_3:3117078-3117097 | None:intergenic | 40.0% |
AGGTGATCAGTGAATGTTTC+TGG | - | chr1_3:3117083-3117102 | None:intergenic | 40.0% | |
CATTCACTGATCACCTTAAC+TGG | + | chr1_3:3117087-3117106 | Msa0097310:CDS | 40.0% | |
!! | TTGAAAGTGTTTCGGCTTCT+TGG | - | chr1_3:3117205-3117224 | None:intergenic | 40.0% |
!!! | CGGCTGTTTTGAAAGTGTTT+CGG | - | chr1_3:3117213-3117232 | None:intergenic | 40.0% |
CGAAACACTTTCAAAACAGC+CGG | + | chr1_3:3117211-3117230 | Msa0097310:CDS | 40.0% | |
GAAACACTTTCAAAACAGCC+GGG | + | chr1_3:3117212-3117231 | Msa0097310:CDS | 40.0% | |
GGTATAACATCGAGAATTCC+CGG | - | chr1_3:3117233-3117252 | None:intergenic | 40.0% | |
! | GTGTTCTTGTTGTGTGAAGT+TGG | - | chr1_3:3117268-3117287 | None:intergenic | 40.0% |
! | TGACTTTGTTGTCTAGAGTG+AGG | - | chr1_3:3117329-3117348 | None:intergenic | 40.0% |
TTGGTCCAATACCAAGTAAC+TGG | + | chr1_3:3117414-3117433 | Msa0097310:CDS | 40.0% | |
CCTTTCCAGTTACTTGGTAT+TGG | - | chr1_3:3117422-3117441 | None:intergenic | 40.0% | |
CCAATACCAAGTAACTGGAA+AGG | + | chr1_3:3117419-3117438 | Msa0097310:CDS | 40.0% | |
CATACACCTTTCCAGTTACT+TGG | - | chr1_3:3117428-3117447 | None:intergenic | 40.0% | |
! | TGGAAAGGTGTATGTGAAAC+CGG | + | chr1_3:3117434-3117453 | Msa0097310:CDS | 40.0% |
CACTGCAACAGAAAACTCAT+AGG | + | chr1_3:3117476-3117495 | Msa0097310:CDS | 40.0% | |
ACAGAAAACTCATAGGTGCA+AGG | + | chr1_3:3117483-3117502 | Msa0097310:CDS | 40.0% | |
! | GTAGCAGAAGCTAGCTTATT+CGG | + | chr1_3:3117626-3117645 | Msa0097310:CDS | 40.0% |
! | AGCTTATTCGGTTTAGCTTC+TGG | + | chr1_3:3117638-3117657 | Msa0097310:CDS | 40.0% |
GTTTCATCTTCAGCAGGAAA+TGG | + | chr1_3:3117875-3117894 | Msa0097310:CDS | 40.0% | |
TTTGACAAGCTTTCAGCACT+TGG | - | chr1_3:3117905-3117924 | None:intergenic | 40.0% | |
TGCTGAAAGCTTGTCAAATG+TGG | + | chr1_3:3117907-3117926 | Msa0097310:CDS | 40.0% | |
AAAATCGCGGTCAATTGTTC+CGG | - | chr1_3:3117957-3117976 | None:intergenic | 40.0% | |
TTGCTACCACTTGTTTATGC+AGG | + | chr1_3:3118055-3118074 | Msa0097310:CDS | 40.0% | |
AAACCGGATTTAATAGCTCC+CGG | + | chr1_3:3118460-3118479 | Msa0097310:CDS | 40.0% | |
ACCGGCTAAAATGTTTACAC+CGG | - | chr1_3:3118482-3118501 | None:intergenic | 40.0% | |
!! | GTGTAAACATTTTAGCCGGT+TGG | + | chr1_3:3118482-3118501 | Msa0097310:CDS | 40.0% |
GCATACACCTCGTACAAAAA+CGG | + | chr1_3:3118676-3118695 | Msa0097310:CDS | 40.0% | |
!! | TGTTTGTCCGTTTTTGTACG+AGG | - | chr1_3:3118686-3118705 | None:intergenic | 40.0% |
CAATTGTAGATGTTGCAACC+GGG | + | chr1_3:3118704-3118723 | Msa0097310:CDS | 40.0% | |
!! | ACTCCCTTTGATTTTGGATC+TGG | + | chr1_3:3118736-3118755 | Msa0097310:CDS | 40.0% |
GTGACCAGATCCAAAATCAA+AGG | - | chr1_3:3118743-3118762 | None:intergenic | 40.0% | |
CATAAACAAGACCAGGATCA+AGG | - | chr1_3:3118783-3118802 | None:intergenic | 40.0% | |
ATCAACGTCGATGACTATCT+TGG | + | chr1_3:3118805-3118824 | Msa0097310:CDS | 40.0% | |
GAGAGTTTACTTGTGATGCA+AGG | + | chr1_3:3118881-3118900 | Msa0097310:CDS | 40.0% | |
GTGATGCAAGGAAGAAATAC+AGG | + | chr1_3:3118893-3118912 | Msa0097310:CDS | 40.0% | |
!!! | TCCTTCTTTTGCTGTTGCTT+TGG | + | chr1_3:3118933-3118952 | Msa0097310:CDS | 40.0% |
TCCAAAGCAACAGCAAAAGA+AGG | - | chr1_3:3118937-3118956 | None:intergenic | 40.0% | |
!! | TGTTGCTTTGGAAACTGCTT+CGG | + | chr1_3:3118945-3118964 | Msa0097310:CDS | 40.0% |
CAATAGGGTTCTTACAAACG+TGG | + | chr1_3:3119008-3119027 | Msa0097310:CDS | 40.0% | |
GGGAACTTATAATGCTTCAG+TGG | + | chr1_3:3119038-3119057 | Msa0097310:CDS | 40.0% | |
! | TAAGGAGGTGTATGAGAAGA+AGG | + | chr1_3:3119122-3119141 | Msa0097310:CDS | 40.0% |
CCAAAACTCTTAGTTCCAGA+AGG | - | chr1_3:3119180-3119199 | None:intergenic | 40.0% | |
!!! | CCTTCTGGAACTAAGAGTTT+TGG | + | chr1_3:3119177-3119196 | Msa0097310:CDS | 40.0% |
! | GGCTATTTGGAATGGAATGA+TGG | + | chr1_3:3119198-3119217 | Msa0097310:CDS | 40.0% |
! | ATGGAATGATGGGAAGCATA+AGG | + | chr1_3:3119209-3119228 | Msa0097310:CDS | 40.0% |
! | AATGATGGGAAGCATAAGGT+TGG | + | chr1_3:3119213-3119232 | Msa0097310:CDS | 40.0% |
! | ATGATGGGAAGCATAAGGTT+GGG | + | chr1_3:3119214-3119233 | Msa0097310:CDS | 40.0% |
GGAGTCCAATTGCATTTAGT+TGG | + | chr1_3:3119235-3119254 | Msa0097310:CDS | 40.0% | |
!! | AGTGAATGTTTCTGGCATGG+TGG | - | chr1_3:3117075-3117094 | None:intergenic | 45.0% |
ACAAGAACACCACAGTTCCT+TGG | + | chr1_3:3117278-3117297 | Msa0097310:CDS | 45.0% | |
TTTGGCAAACCAAGGAACTG+TGG | - | chr1_3:3117290-3117309 | None:intergenic | 45.0% | |
AGCTTAGATGACACAGGACT+TGG | + | chr1_3:3117395-3117414 | Msa0097310:CDS | 45.0% | |
! | AAAGGGTATGAAGCAGCACT+TGG | + | chr1_3:3117515-3117534 | Msa0097310:CDS | 45.0% |
!! | GCTAGAGATGATGATGGACA+TGG | + | chr1_3:3117569-3117588 | Msa0097310:CDS | 45.0% |
CACACATTAACAACAGCAGC+AGG | + | chr1_3:3117596-3117615 | Msa0097310:CDS | 45.0% | |
TTAGCTTCTGGTACAGCAAG+AGG | + | chr1_3:3117650-3117669 | Msa0097310:CDS | 45.0% | |
!! | TACAAAGTGTGCTGGCTTAG+TGG | + | chr1_3:3117701-3117720 | Msa0097310:CDS | 45.0% |
TTCACTTCAGACATAGCTGC+TGG | + | chr1_3:3117728-3117747 | Msa0097310:CDS | 45.0% | |
TTCAGACATAGCTGCTGGAA+TGG | + | chr1_3:3117733-3117752 | Msa0097310:CDS | 45.0% | |
ATCTTATCGATGTCCATCGG+TGG | + | chr1_3:3117782-3117801 | Msa0097310:CDS | 45.0% | |
TCTTATCGATGTCCATCGGT+GGG | + | chr1_3:3117783-3117802 | Msa0097310:CDS | 45.0% | |
GCTTTCACAGCAATGTCTCA+TGG | + | chr1_3:3117845-3117864 | Msa0097310:CDS | 45.0% | |
TCATCTTCAGCAGGAAATGG+TGG | + | chr1_3:3117878-3117897 | Msa0097310:CDS | 45.0% | |
ACTGGTGCATCACTTTACAG+TGG | + | chr1_3:3118013-3118032 | Msa0097310:CDS | 45.0% | |
ACAAGTTCAACCTTCACCAG+TGG | + | chr1_3:3118387-3118406 | Msa0097310:CDS | 45.0% | |
GTAGCAGCATTCAGTTCAAG+AGG | + | chr1_3:3118409-3118428 | Msa0097310:CDS | 45.0% | |
ACACCGGGAGCTATTAAATC+CGG | - | chr1_3:3118466-3118485 | None:intergenic | 45.0% | |
CCGGCTAAAATGTTTACACC+GGG | - | chr1_3:3118481-3118500 | None:intergenic | 45.0% | |
!! | CCCGGTGTAAACATTTTAGC+CGG | + | chr1_3:3118478-3118497 | Msa0097310:CDS | 45.0% |
!! | AACATTTTAGCCGGTTGGAC+TGG | + | chr1_3:3118487-3118506 | Msa0097310:CDS | 45.0% |
TTATCAAGAGCTAAGCCGGT+TGG | - | chr1_3:3118523-3118542 | None:intergenic | 45.0% | |
CCTCTTATCAAGAGCTAAGC+CGG | - | chr1_3:3118527-3118546 | None:intergenic | 45.0% | |
!! | TTAAAGGTGCTTACCCCGAA+TGG | + | chr1_3:3118617-3118636 | Msa0097310:CDS | 45.0% |
TTTGTACGAGGTGTATGCTG+TGG | - | chr1_3:3118674-3118693 | None:intergenic | 45.0% | |
CCAAAATCAAAGGGAGTAGC+TGG | - | chr1_3:3118733-3118752 | None:intergenic | 45.0% | |
!! | CCAGCTACTCCCTTTGATTT+TGG | + | chr1_3:3118730-3118749 | Msa0097310:CDS | 45.0% |
! | TGATTTTGGATCTGGTCACG+TGG | + | chr1_3:3118744-3118763 | Msa0097310:CDS | 45.0% |
!! | ATCAGATCAAACTTGCTGCG+AGG | + | chr1_3:3118857-3118876 | Msa0097310:CDS | 45.0% |
!! | GTTGCTTTGGAAACTGCTTC+GGG | + | chr1_3:3118946-3118965 | Msa0097310:CDS | 45.0% |
TTGGAAACTGCTTCGGGAAT+TGG | + | chr1_3:3118952-3118971 | Msa0097310:CDS | 45.0% | |
TCTTACAAACGTGGGAACTC+CGG | + | chr1_3:3119017-3119036 | Msa0097310:CDS | 45.0% | |
!! | TGCTTCAGTGGTGTTGTCAT+CGG | + | chr1_3:3119050-3119069 | Msa0097310:CDS | 45.0% |
ATTTGTGGCTCAATGCCTTC+TGG | + | chr1_3:3119162-3119181 | Msa0097310:CDS | 45.0% | |
!! | AGTGAATGTTTCTGGCATGG+TGG | - | chr1_3:3117075-3117094 | None:intergenic | 45.0% |
ACAAGAACACCACAGTTCCT+TGG | + | chr1_3:3117278-3117297 | Msa0097310:CDS | 45.0% | |
TTTGGCAAACCAAGGAACTG+TGG | - | chr1_3:3117290-3117309 | None:intergenic | 45.0% | |
AGCTTAGATGACACAGGACT+TGG | + | chr1_3:3117395-3117414 | Msa0097310:CDS | 45.0% | |
! | AAAGGGTATGAAGCAGCACT+TGG | + | chr1_3:3117515-3117534 | Msa0097310:CDS | 45.0% |
!! | GCTAGAGATGATGATGGACA+TGG | + | chr1_3:3117569-3117588 | Msa0097310:CDS | 45.0% |
CACACATTAACAACAGCAGC+AGG | + | chr1_3:3117596-3117615 | Msa0097310:CDS | 45.0% | |
TTAGCTTCTGGTACAGCAAG+AGG | + | chr1_3:3117650-3117669 | Msa0097310:CDS | 45.0% | |
!! | TACAAAGTGTGCTGGCTTAG+TGG | + | chr1_3:3117701-3117720 | Msa0097310:CDS | 45.0% |
TTCACTTCAGACATAGCTGC+TGG | + | chr1_3:3117728-3117747 | Msa0097310:CDS | 45.0% | |
TTCAGACATAGCTGCTGGAA+TGG | + | chr1_3:3117733-3117752 | Msa0097310:CDS | 45.0% | |
ATCTTATCGATGTCCATCGG+TGG | + | chr1_3:3117782-3117801 | Msa0097310:CDS | 45.0% | |
TCTTATCGATGTCCATCGGT+GGG | + | chr1_3:3117783-3117802 | Msa0097310:CDS | 45.0% | |
GCTTTCACAGCAATGTCTCA+TGG | + | chr1_3:3117845-3117864 | Msa0097310:CDS | 45.0% | |
TCATCTTCAGCAGGAAATGG+TGG | + | chr1_3:3117878-3117897 | Msa0097310:CDS | 45.0% | |
ACTGGTGCATCACTTTACAG+TGG | + | chr1_3:3118013-3118032 | Msa0097310:CDS | 45.0% | |
ACAAGTTCAACCTTCACCAG+TGG | + | chr1_3:3118387-3118406 | Msa0097310:CDS | 45.0% | |
GTAGCAGCATTCAGTTCAAG+AGG | + | chr1_3:3118409-3118428 | Msa0097310:CDS | 45.0% | |
ACACCGGGAGCTATTAAATC+CGG | - | chr1_3:3118466-3118485 | None:intergenic | 45.0% | |
CCGGCTAAAATGTTTACACC+GGG | - | chr1_3:3118481-3118500 | None:intergenic | 45.0% | |
!! | CCCGGTGTAAACATTTTAGC+CGG | + | chr1_3:3118478-3118497 | Msa0097310:CDS | 45.0% |
!! | AACATTTTAGCCGGTTGGAC+TGG | + | chr1_3:3118487-3118506 | Msa0097310:CDS | 45.0% |
TTATCAAGAGCTAAGCCGGT+TGG | - | chr1_3:3118523-3118542 | None:intergenic | 45.0% | |
CCTCTTATCAAGAGCTAAGC+CGG | - | chr1_3:3118527-3118546 | None:intergenic | 45.0% | |
!! | TTAAAGGTGCTTACCCCGAA+TGG | + | chr1_3:3118617-3118636 | Msa0097310:CDS | 45.0% |
TTTGTACGAGGTGTATGCTG+TGG | - | chr1_3:3118674-3118693 | None:intergenic | 45.0% | |
CCAAAATCAAAGGGAGTAGC+TGG | - | chr1_3:3118733-3118752 | None:intergenic | 45.0% | |
!! | CCAGCTACTCCCTTTGATTT+TGG | + | chr1_3:3118730-3118749 | Msa0097310:CDS | 45.0% |
! | TGATTTTGGATCTGGTCACG+TGG | + | chr1_3:3118744-3118763 | Msa0097310:CDS | 45.0% |
!! | ATCAGATCAAACTTGCTGCG+AGG | + | chr1_3:3118857-3118876 | Msa0097310:CDS | 45.0% |
!! | GTTGCTTTGGAAACTGCTTC+GGG | + | chr1_3:3118946-3118965 | Msa0097310:CDS | 45.0% |
TTGGAAACTGCTTCGGGAAT+TGG | + | chr1_3:3118952-3118971 | Msa0097310:CDS | 45.0% | |
TCTTACAAACGTGGGAACTC+CGG | + | chr1_3:3119017-3119036 | Msa0097310:CDS | 45.0% | |
!! | TGCTTCAGTGGTGTTGTCAT+CGG | + | chr1_3:3119050-3119069 | Msa0097310:CDS | 45.0% |
ATTTGTGGCTCAATGCCTTC+TGG | + | chr1_3:3119162-3119181 | Msa0097310:CDS | 45.0% | |
GCGATGTGTCGAACCAGTTA+AGG | - | chr1_3:3117103-3117122 | None:intergenic | 50.0% | |
GCTTGTCAAATGTGGCACCA+TGG | + | chr1_3:3117915-3117934 | Msa0097310:CDS | 50.0% | |
GCACCATGGATAACAACCGT+TGG | + | chr1_3:3117929-3117948 | Msa0097310:CDS | 50.0% | |
GCACCAACGGTTGTTATCCA+TGG | - | chr1_3:3117935-3117954 | None:intergenic | 50.0% | |
TGGATAACAACCGTTGGTGC+CGG | + | chr1_3:3117935-3117954 | Msa0097310:CDS | 50.0% | |
GTCAATTGTTCCGGCACCAA+CGG | - | chr1_3:3117948-3117967 | None:intergenic | 50.0% | |
TCTTCTACCAGCAGCAGCAT+TGG | + | chr1_3:3118279-3118298 | Msa0097310:CDS | 50.0% | |
CTTCTACCAGCAGCAGCATT+GGG | + | chr1_3:3118280-3118299 | Msa0097310:CDS | 50.0% | |
! | TTTTGACCCAATGCTGCTGC+TGG | - | chr1_3:3118289-3118308 | None:intergenic | 50.0% |
AATGCTGCTACCACTGGTGA+AGG | - | chr1_3:3118400-3118419 | None:intergenic | 50.0% | |
GAACTGAATGCTGCTACCAC+TGG | - | chr1_3:3118406-3118425 | None:intergenic | 50.0% | |
! | CCGGCTTAGCTCTTGATAAG+AGG | + | chr1_3:3118524-3118543 | Msa0097310:CDS | 50.0% |
TATAGCAGCAGGGCTCCATT+CGG | - | chr1_3:3118635-3118654 | None:intergenic | 50.0% | |
AATGGAGCCCTGCTGCTATA+CGG | + | chr1_3:3118635-3118654 | Msa0097310:CDS | 50.0% | |
! | AAAGGGAGTAGCTGGTTTCC+CGG | - | chr1_3:3118725-3118744 | None:intergenic | 50.0% |
GAAACTGCTTCGGGAATTGG+TGG | + | chr1_3:3118955-3118974 | Msa0097310:CDS | 50.0% | |
CTTACAAACGTGGGAACTCC+GGG | + | chr1_3:3119018-3119037 | Msa0097310:CDS | 50.0% | |
!! | TTCAGTGGTGTTGTCATCGG+TGG | + | chr1_3:3119053-3119072 | Msa0097310:CDS | 50.0% |
! | GTCATCGGTGGATTCTTCGT+CGG | + | chr1_3:3119065-3119084 | Msa0097310:CDS | 50.0% |
TTCTTCGTCGGTGAAGGTTG+TGG | + | chr1_3:3119077-3119096 | Msa0097310:CDS | 50.0% | |
GCGATGTGTCGAACCAGTTA+AGG | - | chr1_3:3117103-3117122 | None:intergenic | 50.0% | |
GCTTGTCAAATGTGGCACCA+TGG | + | chr1_3:3117915-3117934 | Msa0097310:CDS | 50.0% | |
GCACCATGGATAACAACCGT+TGG | + | chr1_3:3117929-3117948 | Msa0097310:CDS | 50.0% | |
GCACCAACGGTTGTTATCCA+TGG | - | chr1_3:3117935-3117954 | None:intergenic | 50.0% | |
TGGATAACAACCGTTGGTGC+CGG | + | chr1_3:3117935-3117954 | Msa0097310:CDS | 50.0% | |
GTCAATTGTTCCGGCACCAA+CGG | - | chr1_3:3117948-3117967 | None:intergenic | 50.0% | |
TCTTCTACCAGCAGCAGCAT+TGG | + | chr1_3:3118279-3118298 | Msa0097310:CDS | 50.0% | |
CTTCTACCAGCAGCAGCATT+GGG | + | chr1_3:3118280-3118299 | Msa0097310:CDS | 50.0% | |
! | TTTTGACCCAATGCTGCTGC+TGG | - | chr1_3:3118289-3118308 | None:intergenic | 50.0% |
AATGCTGCTACCACTGGTGA+AGG | - | chr1_3:3118400-3118419 | None:intergenic | 50.0% | |
GAACTGAATGCTGCTACCAC+TGG | - | chr1_3:3118406-3118425 | None:intergenic | 50.0% | |
! | CCGGCTTAGCTCTTGATAAG+AGG | + | chr1_3:3118524-3118543 | Msa0097310:CDS | 50.0% |
TATAGCAGCAGGGCTCCATT+CGG | - | chr1_3:3118635-3118654 | None:intergenic | 50.0% | |
AATGGAGCCCTGCTGCTATA+CGG | + | chr1_3:3118635-3118654 | Msa0097310:CDS | 50.0% | |
! | AAAGGGAGTAGCTGGTTTCC+CGG | - | chr1_3:3118725-3118744 | None:intergenic | 50.0% |
GAAACTGCTTCGGGAATTGG+TGG | + | chr1_3:3118955-3118974 | Msa0097310:CDS | 50.0% | |
CTTACAAACGTGGGAACTCC+GGG | + | chr1_3:3119018-3119037 | Msa0097310:CDS | 50.0% | |
!! | TTCAGTGGTGTTGTCATCGG+TGG | + | chr1_3:3119053-3119072 | Msa0097310:CDS | 50.0% |
! | GTCATCGGTGGATTCTTCGT+CGG | + | chr1_3:3119065-3119084 | Msa0097310:CDS | 50.0% |
TTCTTCGTCGGTGAAGGTTG+TGG | + | chr1_3:3119077-3119096 | Msa0097310:CDS | 50.0% | |
TCGCGGCTTACAAAGTGTGC+TGG | + | chr1_3:3117693-3117712 | Msa0097310:CDS | 55.0% | |
ATCCATCATGCTCCCACCGA+TGG | - | chr1_3:3117798-3117817 | None:intergenic | 55.0% | |
!! | TTTAGCCGGTTGGACTGGTG+CGG | + | chr1_3:3118492-3118511 | Msa0097310:CDS | 55.0% |
ACTCGCGTGAGGACATGACA+TGG | - | chr1_3:3118581-3118600 | None:intergenic | 55.0% | |
ATGTCATGTCCTCACGCGAG+TGG | + | chr1_3:3118580-3118599 | Msa0097310:CDS | 55.0% | |
ATAGCAGCAGGGCTCCATTC+GGG | - | chr1_3:3118634-3118653 | None:intergenic | 55.0% | |
! | GTGCTGACCGTATAGCAGCA+GGG | - | chr1_3:3118645-3118664 | None:intergenic | 55.0% |
!! | AGTGCTGACCGTATAGCAGC+AGG | - | chr1_3:3118646-3118665 | None:intergenic | 55.0% |
CCAGGATCAAGGGCAGATAC+AGG | - | chr1_3:3118772-3118791 | None:intergenic | 55.0% | |
CCTGTATCTGCCCTTGATCC+TGG | + | chr1_3:3118769-3118788 | Msa0097310:CDS | 55.0% | |
ACTGCTTCGGGAATTGGTGG+TGG | + | chr1_3:3118958-3118977 | Msa0097310:CDS | 55.0% | |
! | GGTGGATTCTTCGTCGGTGA+AGG | + | chr1_3:3119071-3119090 | Msa0097310:CDS | 55.0% |
TTCGTCGGTGAAGGTTGTGG+TGG | + | chr1_3:3119080-3119099 | Msa0097310:CDS | 55.0% | |
! | GGTGAAGGTTGTGGTGGAAC+CGG | + | chr1_3:3119086-3119105 | Msa0097310:CDS | 55.0% |
TCGCGGCTTACAAAGTGTGC+TGG | + | chr1_3:3117693-3117712 | Msa0097310:CDS | 55.0% | |
ATCCATCATGCTCCCACCGA+TGG | - | chr1_3:3117798-3117817 | None:intergenic | 55.0% | |
!! | TTTAGCCGGTTGGACTGGTG+CGG | + | chr1_3:3118492-3118511 | Msa0097310:CDS | 55.0% |
ACTCGCGTGAGGACATGACA+TGG | - | chr1_3:3118581-3118600 | None:intergenic | 55.0% | |
ATGTCATGTCCTCACGCGAG+TGG | + | chr1_3:3118580-3118599 | Msa0097310:CDS | 55.0% | |
ATAGCAGCAGGGCTCCATTC+GGG | - | chr1_3:3118634-3118653 | None:intergenic | 55.0% | |
! | GTGCTGACCGTATAGCAGCA+GGG | - | chr1_3:3118645-3118664 | None:intergenic | 55.0% |
!! | AGTGCTGACCGTATAGCAGC+AGG | - | chr1_3:3118646-3118665 | None:intergenic | 55.0% |
CCAGGATCAAGGGCAGATAC+AGG | - | chr1_3:3118772-3118791 | None:intergenic | 55.0% | |
CCTGTATCTGCCCTTGATCC+TGG | + | chr1_3:3118769-3118788 | Msa0097310:CDS | 55.0% | |
ACTGCTTCGGGAATTGGTGG+TGG | + | chr1_3:3118958-3118977 | Msa0097310:CDS | 55.0% | |
! | GGTGGATTCTTCGTCGGTGA+AGG | + | chr1_3:3119071-3119090 | Msa0097310:CDS | 55.0% |
TTCGTCGGTGAAGGTTGTGG+TGG | + | chr1_3:3119080-3119099 | Msa0097310:CDS | 55.0% | |
! | GGTGAAGGTTGTGGTGGAAC+CGG | + | chr1_3:3119086-3119105 | Msa0097310:CDS | 55.0% |
! | GTCTACAGAAGCGCGTGTCG+CGG | + | chr1_3:3117676-3117695 | Msa0097310:CDS | 60.0% |
! | GTCCATCGGTGGGAGCATGA+TGG | + | chr1_3:3117793-3117812 | Msa0097310:CDS | 60.0% |
ACCAACCGCACCAGTCCAAC+CGG | - | chr1_3:3118500-3118519 | None:intergenic | 60.0% | |
! | ACTGGTGCGGTTGGTCCAAC+CGG | + | chr1_3:3118505-3118524 | Msa0097310:CDS | 60.0% |
GCAGCTAAACCACTCGCGTG+AGG | - | chr1_3:3118592-3118611 | None:intergenic | 60.0% | |
TAGCAGCAGGGCTCCATTCG+GGG | - | chr1_3:3118633-3118652 | None:intergenic | 60.0% | |
! | GTCTACAGAAGCGCGTGTCG+CGG | + | chr1_3:3117676-3117695 | Msa0097310:CDS | 60.0% |
! | GTCCATCGGTGGGAGCATGA+TGG | + | chr1_3:3117793-3117812 | Msa0097310:CDS | 60.0% |
ACCAACCGCACCAGTCCAAC+CGG | - | chr1_3:3118500-3118519 | None:intergenic | 60.0% | |
! | ACTGGTGCGGTTGGTCCAAC+CGG | + | chr1_3:3118505-3118524 | Msa0097310:CDS | 60.0% |
GCAGCTAAACCACTCGCGTG+AGG | - | chr1_3:3118592-3118611 | None:intergenic | 60.0% | |
TAGCAGCAGGGCTCCATTCG+GGG | - | chr1_3:3118633-3118652 | None:intergenic | 60.0% | |
!! | GCCGGTTGGACTGGTGCGGT+TGG | + | chr1_3:3118496-3118515 | Msa0097310:CDS | 70.0% |
!! | GCCGGTTGGACTGGTGCGGT+TGG | + | chr1_3:3118496-3118515 | Msa0097310:CDS | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1_3 | gene | 3116954 | 3119263 | 3116954 | ID=Msa0097310;Name=Msa0097310 |
chr1_3 | mRNA | 3116954 | 3119263 | 3116954 | ID=Msa0097310-mRNA-1;Parent=Msa0097310;Name=Msa0097310-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|-1|0|1|-1|1|1|0|769 |
chr1_3 | exon | 3116954 | 3119263 | 3116954 | ID=Msa0097310-mRNA-1:exon:880;Parent=Msa0097310-mRNA-1 |
chr1_3 | CDS | 3116954 | 3119263 | 3116954 | ID=Msa0097310-mRNA-1:cds;Parent=Msa0097310-mRNA-1 |
Gene Sequence |
Protein sequence |