AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1296610

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1296610 MtrunA17_Chr4g0053441 96.382 608 12 1 40 637 222 829 0.0 1194
Msa1296610 MtrunA17_Chr2g0297871 29.338 559 345 11 47 599 27 541 1.47e-60 214
Msa1296610 MtrunA17_Chr4g0050431 30.368 517 324 13 84 588 391 883 1.67e-55 203
Msa1296610 MtrunA17_Chr4g0071991 27.641 568 351 12 39 594 176 695 2.58e-50 188
Msa1296610 MtrunA17_Chr5g0397621 32.193 497 297 14 100 577 385 860 6.40e-49 184
Msa1296610 MtrunA17_Chr3g0136331 29.651 516 317 12 83 573 354 848 1.85e-43 167
Msa1296610 MtrunA17_Chr8g0339181 29.679 529 317 14 66 573 420 914 2.91e-42 164
Msa1296610 MtrunA17_Chr2g0297051 25.980 612 370 15 19 577 407 988 1.42e-40 159
Msa1296610 MtrunA17_Chr4g0052521 25.522 623 364 17 19 577 370 956 2.76e-40 158
Msa1296610 MtrunA17_Chr8g0374321 32.661 248 151 5 45 283 429 669 5.76e-24 107
Msa1296610 MtrunA17_Chr8g0374391 32.955 176 108 4 409 577 30 202 1.42e-16 79.7
Msa1296610 MtrunA17_Chr8g0374331 32.955 176 108 4 409 577 37 209 1.57e-16 79.7
Msa1296610 MtrunA17_Chr8g0374371 34.014 147 88 3 100 238 42 187 4.06e-13 69.3
Msa1296610 MtrunA17_Chr7g0263361 27.982 218 113 8 406 580 616 832 5.91e-12 69.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1296610 AT4G37270.1 76.401 589 128 2 40 618 218 805 0.0 908
Msa1296610 AT5G21930.2 31.022 548 311 14 64 573 322 840 4.23e-51 190
Msa1296610 AT5G21930.1 31.022 548 311 14 64 573 322 840 4.23e-51 190
Msa1296610 AT4G30110.1 27.481 524 344 11 82 599 203 696 1.21e-50 189
Msa1296610 AT4G30110.2 27.481 524 344 11 82 599 203 696 1.21e-50 189
Msa1296610 AT2G19110.2 28.488 516 326 15 93 599 224 705 1.45e-50 189
Msa1296610 AT2G19110.3 28.488 516 326 15 93 599 224 705 1.45e-50 189
Msa1296610 AT2G19110.1 28.488 516 326 15 93 599 224 705 1.45e-50 189
Msa1296610 AT4G33520.2 29.559 521 321 15 84 588 402 892 1.08e-48 184
Msa1296610 AT4G33520.3 29.767 514 321 15 84 580 402 892 1.55e-48 183
Msa1296610 AT5G21930.4 31.311 511 285 13 64 536 322 804 6.48e-48 181
Msa1296610 AT1G63440.1 31.548 504 292 15 100 577 478 954 4.88e-47 179
Msa1296610 AT5G44790.1 28.488 516 317 14 89 575 464 956 1.07e-44 172
Msa1296610 AT5G21930.3 29.380 548 297 16 64 573 322 817 1.03e-40 159
Msa1296610 AT4G30120.2 25.616 406 252 10 39 436 19 382 1.93e-30 124
Msa1296610 AT4G30120.1 25.616 406 252 10 39 436 178 541 2.52e-29 123

Find 200 sgRNAs with CRISPR-Local

Find 638 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAGAGAGGTTTGATAGAAAT+TGG 0.118156 8_3:+56337826 None:intergenic
GGCTTCCCTTCCGTCAGTTT+TGG 0.178850 8_3:-56329341 Msa1296610:CDS
GGACGCTATCTTAAAATAAT+AGG 0.188756 8_3:+56328559 None:intergenic
TCAATTGCTATTGCTGTTCT+TGG 0.210359 8_3:-56334956 Msa1296610:CDS
TATGATTATGATTATGAGTA+TGG 0.221106 8_3:+56337731 None:intergenic
GGCATTGTCTAGCATATTCT+TGG 0.228426 8_3:-56329362 Msa1296610:CDS
TGAGAGAATCAGAGTTTATT+AGG 0.252527 8_3:+56338022 None:intergenic
CAAAGGTGGCTGGATGAATT+TGG 0.281364 8_3:-56335010 Msa1296610:CDS
TCCAGCCACCTTTGAAGTTT+AGG 0.293991 8_3:+56335019 None:intergenic
CGACCAGAATGAACGAGTTT+TGG 0.294272 8_3:+56337464 None:intergenic
GCTATTAATGCATCTTCTTA+TGG 0.295250 8_3:-56332019 Msa1296610:CDS
GGATTTGATTCTTGTGGTTT+TGG 0.298046 8_3:+56337879 None:intergenic
TTTCAAATGGAATAATAAAA+TGG 0.300476 8_3:-56328517 Msa1296610:three_prime_UTR
ACTTCTCGTGCTGTTATAAC+AGG 0.312428 8_3:+56328461 None:intergenic
ACCATTGCATTTGATAAAAC+AGG 0.313148 8_3:-56333089 Msa1296610:CDS
GTCAATCCATTTGGTAGCTT+TGG 0.315025 8_3:+56337597 None:intergenic
GCAACTTATCTTCAGGCTTC+AGG 0.315496 8_3:+56330858 None:intergenic
TATTTGAAATCAAATGTATT+AGG 0.327072 8_3:+56336376 None:intergenic
TCAAGAACAAGTGCAAATTC+TGG 0.329012 8_3:+56336418 None:intergenic
TGGTCGCATTTCCGTTGGTT+GGG 0.332817 8_3:-56337447 Msa1296610:CDS
ACTCAAAGGTGGACATGTTC+TGG 0.334899 8_3:-56333132 Msa1296610:CDS
AGAGAGGTTTGATAGAAATT+GGG 0.342658 8_3:+56337827 None:intergenic
AAGGCAATTGAGCCTGTTTA+CGG 0.342799 8_3:-56333038 Msa1296610:CDS
AAAGGATATCTCAAGAGATA+TGG 0.345113 8_3:-56330828 Msa1296610:CDS
TGTCCAAAACTCGTTCATTC+TGG 0.352789 8_3:-56337467 Msa1296610:CDS
GGTTCTATCTACAGAGCCTT+AGG 0.363004 8_3:-56334204 Msa1296610:CDS
GACAGGTTTGATGAGTGATT+TGG 0.363726 8_3:+56337486 None:intergenic
TTCCATTTGAAAGGCAAAAC+GGG 0.367247 8_3:+56328528 None:intergenic
AACAACTGCACCACAATAAT+AGG 0.367655 8_3:-56338053 Msa1296610:five_prime_UTR
AAAGTTGGAGATAGAGTTCC+TGG 0.368979 8_3:-56335903 Msa1296610:CDS
CACTTGCTGCTGCAACTGTT+GGG 0.374065 8_3:-56329645 Msa1296610:CDS
CTGTAATATATCATGCTTCC+AGG 0.374765 8_3:+56328801 None:intergenic
TGAAGTTGTCTGCCGAGATT+TGG 0.379930 8_3:+56329528 None:intergenic
GACGCTATCTTAAAATAATA+GGG 0.379983 8_3:+56328560 None:intergenic
CATGATATATTACAGTTGAT+TGG 0.380717 8_3:-56328793 Msa1296610:CDS
TGCCTTGGCTGTGGCTCCAT+TGG 0.384104 8_3:-56334157 Msa1296610:CDS
AATCTAGACTCTCCTCTCTT+AGG 0.385080 8_3:-56328762 Msa1296610:CDS
TATGATTATGAGTATGGTTA+TGG 0.386196 8_3:+56337737 None:intergenic
ATGATGGAGAATGAGGAATT+TGG 0.390636 8_3:+56337798 None:intergenic
CTGGTCGCATTTCCGTTGGT+TGG 0.392485 8_3:-56337448 Msa1296610:CDS
AATACCCCTTGTAAATGTAT+AGG 0.402784 8_3:-56328613 Msa1296610:three_prime_UTR
AGTGAGTGAAATTTGGTAGA+AGG 0.403086 8_3:+56337913 None:intergenic
ACATGACGCAACTTATCTTC+AGG 0.418228 8_3:+56330851 None:intergenic
ATTCGCTAGGTCAATCCATT+TGG 0.420166 8_3:+56337588 None:intergenic
GCACTTGCTGCTGCAACTGT+TGG 0.421771 8_3:-56329646 Msa1296610:CDS
TCTCTTAGGACAAATATAAC+AGG 0.423503 8_3:-56328748 Msa1296610:CDS
ATAGGGAATGTCCAATACTT+TGG 0.425078 8_3:+56328577 None:intergenic
TAGGGAATGTCCAATACTTT+GGG 0.426341 8_3:+56328578 None:intergenic
ATTACCATTGAGCACTTGAC+AGG 0.431899 8_3:-56335948 Msa1296610:CDS
ACAGGTTTGATGAGTGATTT+GGG 0.433483 8_3:+56337487 None:intergenic
GATGTGAAGTGAGTGAAATT+TGG 0.440429 8_3:+56337906 None:intergenic
TGTTGCGGCAGCCATGGAAA+AGG 0.442091 8_3:-56332943 Msa1296610:CDS
CTAATGCGATGACCGTAAAC+AGG 0.447398 8_3:+56333026 None:intergenic
ACAGTTGCAGCAGCAAGTGC+TGG 0.448739 8_3:+56329649 None:intergenic
ATTCCATTTGAAAGGCAAAA+CGG 0.453876 8_3:+56328527 None:intergenic
TTGGTCCACTTGTATTTAAG+TGG 0.454297 8_3:-56334937 Msa1296610:CDS
TTTGAGTACTTTCCTGGTAG+AGG 0.454663 8_3:-56332505 Msa1296610:CDS
TACTGGTGGACTTGTATTCA+AGG 0.458170 8_3:-56333057 Msa1296610:CDS
ACCCAAGTGATGCTTTCAAT+AGG 0.465409 8_3:+56332101 None:intergenic
GTGAGTGAAATTTGGTAGAA+GGG 0.465625 8_3:+56337914 None:intergenic
AGGAACTCTATCTCCAACTT+TGG 0.466602 8_3:+56335905 None:intergenic
GGTTGATGTTAAAGAGTTGA+AGG 0.467608 8_3:-56336449 Msa1296610:CDS
CTGGAGGATAGGCCTCGTCC+AGG 0.469698 8_3:-56331007 Msa1296610:CDS
TCAAAATGATACCTTCCAAT+GGG 0.470455 8_3:+56332909 None:intergenic
ACCTAAACTTCAAAGGTGGC+TGG 0.472188 8_3:-56335020 Msa1296610:CDS
TTGCATTCCCACCTGTGAAA+AGG 0.475193 8_3:-56332976 Msa1296610:CDS
ATTTCTTCCATTGTGGATAA+CGG 0.475920 8_3:-56329317 Msa1296610:intron
GGTCGCATTTCCGTTGGTTG+GGG 0.477467 8_3:-56337446 Msa1296610:intron
AAACCTCTGGAGGCCAAAGT+TGG 0.479488 8_3:-56335918 Msa1296610:CDS
TGCAGCATCACCATGTGCCT+TGG 0.480763 8_3:-56334172 Msa1296610:CDS
GTATTTCACAAGTCGTTCAA+TGG 0.480835 8_3:-56336470 Msa1296610:CDS
TGGAGGATAGGCCTCGTCCA+GGG 0.482722 8_3:-56331006 Msa1296610:CDS
TTCCGTGTGATGATGTTAAC+TGG 0.483577 8_3:-56330944 Msa1296610:CDS
ATCACCATGTGCCTTGGCTG+TGG 0.483615 8_3:-56334166 Msa1296610:CDS
AACAACGAAGTTTATGATGA+TGG 0.484541 8_3:+56337782 None:intergenic
GTTTCGCCAAAGCTACCAAA+TGG 0.487686 8_3:-56337603 Msa1296610:five_prime_UTR
GGCGGTGCAAGGAACATAGA+TGG 0.488667 8_3:-56335882 Msa1296610:CDS
TCCAAAACTTGTTACCTCTC+CGG 0.488744 8_3:+56336300 None:intergenic
GTGGGATCATATGTCCTTGT+TGG 0.491264 8_3:-56336325 Msa1296610:CDS
CGTTGATTCACCTGGAGGAT+AGG 0.491810 8_3:-56331018 Msa1296610:CDS
CATTCTGGTCGCATTTCCGT+TGG 0.493184 8_3:-56337452 Msa1296610:CDS
TAAATGAACCATCCTGGTCC+TGG 0.493505 8_3:-56328819 Msa1296610:CDS
GAAATTGGGGATGTGCGAAT+AGG 0.494228 8_3:+56337841 None:intergenic
GGCTTAATTATGGTTGGTGA+AGG 0.494682 8_3:-56329685 Msa1296610:CDS
ATCGATGATGCGAATCTCAC+TGG 0.494904 8_3:-56337646 Msa1296610:five_prime_UTR
TGGTTCATTTAAACCACGTA+TGG 0.495446 8_3:+56328831 None:intergenic
AATAGGAAAAGCGAGGTTAG+AGG 0.496704 8_3:+56337858 None:intergenic
TAATAAAATGGCAAATATCA+AGG 0.499878 8_3:-56328505 Msa1296610:three_prime_UTR
GTTGCGGCAGCCATGGAAAA+GGG 0.505287 8_3:-56332942 Msa1296610:CDS
GTTAGAGGATTTGATTCTTG+TGG 0.505400 8_3:+56337873 None:intergenic
AGTGATTTGGGCAAAGTATG+AGG 0.506012 8_3:+56337499 None:intergenic
TTCAAAATGATACCTTCCAA+TGG 0.509760 8_3:+56332908 None:intergenic
TCATATGTCCTTGTTGGTGC+CGG 0.510228 8_3:-56336319 Msa1296610:CDS
AGGAATTTGGAAGAATAGAG+AGG 0.513522 8_3:+56337811 None:intergenic
GATTAAGCAAAATGTAGCTC+TGG 0.514025 8_3:-56329383 Msa1296610:CDS
AAGGATATCTCAAGAGATAT+GGG 0.514882 8_3:-56330827 Msa1296610:intron
TGCTGTTAACAGTAGCAGTA+AGG 0.516956 8_3:+56332482 None:intergenic
AACCTATTGAAAGCATCACT+TGG 0.517138 8_3:-56332103 Msa1296610:CDS
CTACAGAGCCTTAGGGCTCA+TGG 0.522521 8_3:-56334196 Msa1296610:CDS
TGACCTAGCGAATTTCTTGA+GGG 0.523047 8_3:-56337578 Msa1296610:five_prime_UTR
CGGTCATCGCATTAGAAACA+AGG 0.525626 8_3:-56333018 Msa1296610:CDS
AAAGGAAGCTCTTGCTGTTG+CGG 0.526765 8_3:-56332958 Msa1296610:CDS
TTCCCCTGTCAAGTGCTCAA+TGG 0.526856 8_3:+56335944 None:intergenic
AGATAAGTTGCGTCATGTAA+AGG 0.529752 8_3:-56330846 Msa1296610:CDS
TCTTGCTGTTGCGGCAGCCA+TGG 0.531269 8_3:-56332949 Msa1296610:CDS
TGTTATAACAGCACGAGAAG+TGG 0.532474 8_3:-56328459 Msa1296610:three_prime_UTR
GTTATGATCGGTGTGATTTG+CGG 0.532890 8_3:+56337759 None:intergenic
GAGAGGTTTGATAGAAATTG+GGG 0.535581 8_3:+56337828 None:intergenic
GTTTATGATGATGGAGAATG+AGG 0.537798 8_3:+56337791 None:intergenic
TCTCCAACTTTGGCCTCCAG+AGG 0.537839 8_3:+56335915 None:intergenic
TTTGTTGATGCAGCTTGCAG+AGG 0.543905 8_3:-56334225 Msa1296610:intron
TATCGTGGACAGGAACCCTC+TGG 0.544668 8_3:+56336353 None:intergenic
TTGACCTAGCGAATTTCTTG+AGG 0.545240 8_3:-56337579 Msa1296610:five_prime_UTR
TATATCATGCTTCCAGGACC+AGG 0.545479 8_3:+56328807 None:intergenic
GACAGGGGAAGTCAAACCTC+TGG 0.545837 8_3:-56335931 Msa1296610:CDS
GCAGGTCACGTTGATTCACC+TGG 0.549731 8_3:-56331026 Msa1296610:intron
TGGAAAACTTCACAATCTAC+AGG 0.552595 8_3:+56335984 None:intergenic
AAGATGCCTATACATTTACA+AGG 0.555098 8_3:+56328607 None:intergenic
ATCTCGGCAGACAACTTCAC+TGG 0.558427 8_3:-56329524 Msa1296610:intron
AAGGGCACTACCCACCCCAT+TGG 0.559044 8_3:-56332924 Msa1296610:CDS
CATTCTGTATTGCCAAATCT+CGG 0.561945 8_3:-56329540 Msa1296610:CDS
TATATTACAGTTGATTGGCA+AGG 0.564000 8_3:-56328788 Msa1296610:CDS
TGAATAGACCTAAACTTCAA+AGG 0.565264 8_3:-56335027 Msa1296610:CDS
GTACCTGGTGTACTAAAGAA+TGG 0.569445 8_3:+56334914 None:intergenic
CGAGATTTGGCAATACAGAA+TGG 0.570862 8_3:+56329541 None:intergenic
ATGATACCTTCCAATGGGGT+GGG 0.570870 8_3:+56332914 None:intergenic
AATGATACCTTCCAATGGGG+TGG 0.571569 8_3:+56332913 None:intergenic
CCCACAGTTATATCGTGGAC+AGG 0.573819 8_3:+56336343 None:intergenic
GTTCTATCTACAGAGCCTTA+GGG 0.574940 8_3:-56334203 Msa1296610:CDS
CCATTGCATTTGATAAAACA+GGG 0.581955 8_3:-56333088 Msa1296610:CDS
ATAGAGTTCCTGGCGGTGCA+AGG 0.582278 8_3:-56335893 Msa1296610:CDS
GTTTGTCTCAACTCCATACG+TGG 0.582771 8_3:-56328844 Msa1296610:CDS
TCTATGTTCCTTGCACCGCC+AGG 0.583235 8_3:+56335885 None:intergenic
TGCTGCAACCATGAGCCCTA+AGG 0.586386 8_3:+56334188 None:intergenic
TGCTACTGTTAACAGCATTG+AGG 0.587811 8_3:-56332476 Msa1296610:intron
TGCACAGGAGCTGATTGCTG+TGG 0.588322 8_3:+56334128 None:intergenic
AAAACAGGGACATTGACTAC+TGG 0.589422 8_3:-56333074 Msa1296610:CDS
TCCATTTGAAAGGCAAAACG+GGG 0.589547 8_3:+56328529 None:intergenic
TAAAATGAATTGCAGGGCTG+TGG 0.592347 8_3:-56332575 Msa1296610:intron
TGGCCATTCTTTAGTACACC+AGG 0.592719 8_3:-56334917 Msa1296610:intron
GAAATCCCAAAACTGACGGA+AGG 0.592946 8_3:+56329335 None:intergenic
TTACCATTGAGCACTTGACA+GGG 0.593656 8_3:-56335947 Msa1296610:CDS
ACAGGGACATTGACTACTGG+TGG 0.595895 8_3:-56333071 Msa1296610:CDS
TTGTTATAGTCAGGAGCTGG+AGG 0.596664 8_3:-56332130 Msa1296610:intron
GTGGTTTAAATGAACCATCC+TGG 0.596951 8_3:-56328825 Msa1296610:CDS
AATGGCCACTTAAATACAAG+TGG 0.597154 8_3:+56334932 None:intergenic
TAGTTTCTTACCCCAACCAA+CGG 0.601581 8_3:+56337436 None:intergenic
TGGTAATTGTGGCACCGCCG+TGG 0.601583 8_3:+56335964 None:intergenic
GTAGCAGTAAGGCCTCTACC+AGG 0.601894 8_3:+56332493 None:intergenic
ACCTATTGAAAGCATCACTT+GGG 0.602175 8_3:-56332102 Msa1296610:CDS
TGCCAATGGAGCCACAGCCA+AGG 0.608775 8_3:+56334155 None:intergenic
TGTTATATTTGTCCTAAGAG+AGG 0.609994 8_3:+56328750 None:intergenic
CTTGCTACGGGTCATTACAG+TGG 0.610378 8_3:+56338085 None:intergenic
CATCACAGGTAACAAAGACA+TGG 0.612204 8_3:-56335099 Msa1296610:intron
ATTGCTGTGGCATATGCCAA+TGG 0.613253 8_3:+56334141 None:intergenic
CTGTGGTTGAACATAGTGAA+GGG 0.614550 8_3:-56332558 Msa1296610:CDS
GGACATATGACCTATTATTG+TGG 0.619141 8_3:+56338043 None:intergenic
GCACTACCCACCCCATTGGA+AGG 0.620348 8_3:-56332920 Msa1296610:intron
ATTTGATTTCAAATACCAGA+GGG 0.624066 8_3:-56336368 Msa1296610:CDS
AAATCCCAAAACTGACGGAA+GGG 0.625234 8_3:+56329336 None:intergenic
ATGCAGGTTCTCTTACATGA+AGG 0.625523 8_3:-56328880 Msa1296610:intron
GCTCCCTCAAGAAATTCGCT+AGG 0.625944 8_3:+56337575 None:intergenic
GGAGCCACAGCCAAGGCACA+TGG 0.627092 8_3:+56334162 None:intergenic
TGTCATACCGTTATCCACAA+TGG 0.627678 8_3:+56329310 None:intergenic
CTACACACATCACAAATTCG+CGG 0.629168 8_3:+56328708 None:intergenic
AGATGCCTATACATTTACAA+GGG 0.630095 8_3:+56328608 None:intergenic
GCGTTACAGCAAAGTTGTTG+TGG 0.631820 8_3:-56334984 Msa1296610:CDS
AAGAGAGTTGCAAGTGCTGT+GGG 0.633487 8_3:-56330902 Msa1296610:CDS
TTGCAGGGCATATTACTCAA+AGG 0.636255 8_3:-56333146 Msa1296610:intron
AAAGAGAGTTGCAAGTGCTG+TGG 0.636430 8_3:-56330903 Msa1296610:CDS
GCTGTGGTTGAACATAGTGA+AGG 0.636595 8_3:-56332559 Msa1296610:CDS
ACAGGTAACAAAGACATGGA+AGG 0.636600 8_3:-56335095 Msa1296610:intron
TTACCTCTCCGGCACCAACA+AGG 0.637057 8_3:+56336311 None:intergenic
CAGGGCATATTACTCAAAGG+TGG 0.637638 8_3:-56333143 Msa1296610:CDS
TCCTGTCCACGATATAACTG+TGG 0.638620 8_3:-56336344 Msa1296610:CDS
CCTGTCCACGATATAACTGT+GGG 0.640509 8_3:-56336343 Msa1296610:CDS
TGTCCTTGTTGGTGCCGGAG+AGG 0.641083 8_3:-56336314 Msa1296610:intron
AGATGGTAGAATAATTGTGA+AGG 0.643350 8_3:-56335865 Msa1296610:intron
TCATGCTTCCAGGACCAGGA+TGG 0.644114 8_3:+56328811 None:intergenic
ATGATCCCACAGTTATATCG+TGG 0.648538 8_3:+56336338 None:intergenic
AGTATGGTTATGGTTATGAT+CGG 0.651815 8_3:+56337747 None:intergenic
GGAAGAAATCCCAAAACTGA+CGG 0.653538 8_3:+56329331 None:intergenic
CTTCTCGTGCTGTTATAACA+GGG 0.657074 8_3:+56328462 None:intergenic
CACCAGTTAACATCATCACA+CGG 0.657313 8_3:+56330942 None:intergenic
CATTTGATTTCAAATACCAG+AGG 0.660551 8_3:-56336369 Msa1296610:CDS
TACCATTGAGCACTTGACAG+GGG 0.669528 8_3:-56335946 Msa1296610:CDS
GGAGTTGAGACAAACAAGCA+AGG 0.669963 8_3:+56328852 None:intergenic
ATAGACCTAAACTTCAAAGG+TGG 0.670685 8_3:-56335024 Msa1296610:CDS
AGGGGAAGTCAAACCTCTGG+AGG 0.671091 8_3:-56335928 Msa1296610:CDS
CAGGTTCTCTTACATGAAGG+CGG 0.671593 8_3:-56328877 Msa1296610:CDS
AGTAGAGAAATAGTGTATTG+CGG 0.672392 8_3:-56328674 Msa1296610:three_prime_UTR
GCTACGGGTCATTACAGTGG+AGG 0.672762 8_3:+56338088 None:intergenic
GATGCCTATACATTTACAAG+GGG 0.678179 8_3:+56328609 None:intergenic
CAAGTGCTCAATGGTAATTG+TGG 0.696113 8_3:+56335953 None:intergenic
CAAAATGATACCTTCCAATG+GGG 0.711661 8_3:+56332910 None:intergenic
CCATTTGAAAGGCAAAACGG+GGG 0.719580 8_3:+56328530 None:intergenic
TTTCAACAGAGACAGAAGGG+AGG 0.724915 8_3:+56332530 None:intergenic
GGTCACGTTGATTCACCTGG+AGG 0.730026 8_3:-56331023 Msa1296610:CDS
ATGTGCGAATAGGAAAAGCG+AGG 0.738586 8_3:+56337851 None:intergenic
GTTGGAGATAGAGTTCCTGG+CGG 0.796828 8_3:-56335900 Msa1296610:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAAAAAAAATATATTTTTTA+AGG + chr8_3:56335192-56335211 None:intergenic 0.0%
!! AAAGAAAAAAATAATTTACA+TGG - chr8_3:56331873-56331892 Msa1296610:intron 10.0%
!! AAGAAAAAAATAATTTACAT+GGG - chr8_3:56331874-56331893 Msa1296610:intron 10.0%
!!! TTATTCAAAATTTTAAACAT+GGG - chr8_3:56333333-56333352 Msa1296610:intron 10.0%
!!! TACCTTTTTATTAATTATAA+GGG + chr8_3:56334566-56334585 None:intergenic 10.0%
!!! AAATAATTTTCAAAATAAAC+AGG + chr8_3:56335000-56335019 None:intergenic 10.0%
!!! TTTATATAAAATCAATTTTG+TGG - chr8_3:56335220-56335239 Msa1296610:intron 10.0%
!! TTTAGTAAAAATTATTATTG+TGG - chr8_3:56335962-56335981 Msa1296610:CDS 10.0%
!! TTAGTAAAAATTATTATTGT+GGG - chr8_3:56335963-56335982 Msa1296610:CDS 10.0%
!! TACAAAATTATTATAAAATG+AGG - chr8_3:56336051-56336070 Msa1296610:intron 10.0%
!! AGTATTAAGAATTTAAAAAA+AGG + chr8_3:56336086-56336105 None:intergenic 10.0%
!! AGGATATTTAAAAATAAATT+AGG + chr8_3:56336164-56336183 None:intergenic 10.0%
!! AAAAAAATAAAAATTGAGAA+AGG - chr8_3:56336470-56336489 Msa1296610:CDS 10.0%
!! AAAAAATAAAAATTGAGAAA+GGG - chr8_3:56336471-56336490 Msa1296610:CDS 10.0%
!!! TTTTAAAGAAAAAAAAAATG+TGG - chr8_3:56337056-56337075 Msa1296610:intron 10.0%
!!! TTTATTTTCTTTAGAAATTA+TGG - chr8_3:56337361-56337380 Msa1296610:intron 10.0%
!! AGAAAAATAATACTTTATTA+GGG + chr8_3:56337534-56337553 None:intergenic 10.0%
!! AAGAAAAATAATACTTTATT+AGG + chr8_3:56337535-56337554 None:intergenic 10.0%
!!! ACATTCAACTTTTATAATAA+TGG - chr8_3:56328545-56328564 Msa1296610:three_prime_UTR 15.0%
!! TTAATCAAACAAATACATTA+TGG - chr8_3:56329429-56329448 Msa1296610:intron 15.0%
!!! TATTTGAAATCAAATGTATT+AGG + chr8_3:56330166-56330185 None:intergenic 15.0%
!!! TCAATATATATTATTTTAGG+AGG - chr8_3:56330990-56331009 Msa1296610:CDS 15.0%
!!! TATAATGGAGATATTTATAA+TGG + chr8_3:56331156-56331175 None:intergenic 15.0%
!! TTAAATGATAATTAAAGGAA+AGG + chr8_3:56331755-56331774 None:intergenic 15.0%
!! TTCCTTTAATTATCATTTAA+TGG - chr8_3:56331755-56331774 Msa1296610:intron 15.0%
!! TTCCATTAAATGATAATTAA+AGG + chr8_3:56331760-56331779 None:intergenic 15.0%
!!! GGAAAAAAAAAACTTTATTT+TGG - chr8_3:56332772-56332791 Msa1296610:intron 15.0%
!!! CTTATTCAAAATTTTAAACA+TGG - chr8_3:56333332-56333351 Msa1296610:intron 15.0%
!! CTATATTTATATATTTGAGA+TGG + chr8_3:56333890-56333909 None:intergenic 15.0%
!!! CTACCTTTTTATTAATTATA+AGG + chr8_3:56334567-56334586 None:intergenic 15.0%
!!! AGAAATGATATTTTTTATGT+TGG - chr8_3:56334688-56334707 Msa1296610:intron 15.0%
!! ACCAATTTCTAAATTTAATA+AGG - chr8_3:56334817-56334836 Msa1296610:intron 15.0%
!! ACCTTATTAAATTTAGAAAT+TGG + chr8_3:56334821-56334840 None:intergenic 15.0%
!!! TAACCAAATTAATTTTTTAG+AGG - chr8_3:56335343-56335362 Msa1296610:intron 15.0%
!!! AAAATTTTAGGTGAAAAAAA+AGG + chr8_3:56335369-56335388 None:intergenic 15.0%
!! TGTTAGAAATAATGTAAATA+GGG - chr8_3:56335811-56335830 Msa1296610:intron 15.0%
!!! TATATTTATTCATTAGTCTA+CGG + chr8_3:56336017-56336036 None:intergenic 15.0%
!! TAAGAATTTAAAAAAAGGAA+TGG + chr8_3:56336081-56336100 None:intergenic 15.0%
!! GTGTTTATATAACAAAAAAA+GGG + chr8_3:56336135-56336154 None:intergenic 15.0%
!! TGTGTTTATATAACAAAAAA+AGG + chr8_3:56336136-56336155 None:intergenic 15.0%
!! AAAAATAAAAATTGAGAAAG+GGG - chr8_3:56336472-56336491 Msa1296610:CDS 15.0%
!! GAAAAATAATACTTTATTAG+GGG + chr8_3:56337533-56337552 None:intergenic 15.0%
!!! ATTTTATTATTCCATTTGAA+AGG + chr8_3:56338023-56338042 None:intergenic 15.0%
!! TTTCAAATGGAATAATAAAA+TGG - chr8_3:56338022-56338041 Msa1296610:five_prime_UTR 15.0%
!! TATGATTATGATTATGAGTA+TGG + chr8_3:56328811-56328830 None:intergenic 20.0%
!!! GTTTTTTTCATATACTATCA+TGG - chr8_3:56329836-56329855 Msa1296610:intron 20.0%
!!! AATAAGTTGAAAACAACTTA+TGG - chr8_3:56329876-56329895 Msa1296610:intron 20.0%
!!! TTTGATTCGTTTAATTTGAA+TGG - chr8_3:56330030-56330049 Msa1296610:intron 20.0%
!!! TTTTGGAATTTTAATTGCTT+GGG - chr8_3:56330255-56330274 Msa1296610:intron 20.0%
!!! TTTTTACTACAATTGTTAGT+TGG - chr8_3:56330366-56330385 Msa1296610:intron 20.0%
!! TGAAACTTGGTTAATTATAA+TGG + chr8_3:56331171-56331190 None:intergenic 20.0%
!! TTGACAAAGATTGAAAAATA+AGG - chr8_3:56331233-56331252 Msa1296610:intron 20.0%
!! ATTATCATTTAATGGAAATG+TGG - chr8_3:56331763-56331782 Msa1296610:intron 20.0%
!! GCTGAAATATAATTATATGA+AGG + chr8_3:56332284-56332303 None:intergenic 20.0%
!!! TTTTATTACACTGTTGAATA+TGG - chr8_3:56333082-56333101 Msa1296610:CDS 20.0%
!! TGCTAACTATATGTTATAAT+GGG - chr8_3:56334276-56334295 Msa1296610:intron 20.0%
!!! GTTTTTATTTTGTTATAGTC+AGG - chr8_3:56334400-56334419 Msa1296610:intron 20.0%
!! TGCCCTTATAATTAATAAAA+AGG - chr8_3:56334561-56334580 Msa1296610:intron 20.0%
!!! AGATTTAATGTGTTTTGTTT+GGG + chr8_3:56335046-56335065 None:intergenic 20.0%
!! GTGTTAGAAATAATGTAAAT+AGG - chr8_3:56335810-56335829 Msa1296610:intron 20.0%
!!! TTTTCTTATTTCTCTCAATA+CGG - chr8_3:56335885-56335904 Msa1296610:CDS 20.0%
!!! ATATTTATTCATTAGTCTAC+GGG + chr8_3:56336016-56336035 None:intergenic 20.0%
!! TATGCAAAATTGGAAAAATT+AGG + chr8_3:56336195-56336214 None:intergenic 20.0%
!! AGGAAATAATTATGCAAAAT+TGG + chr8_3:56336205-56336224 None:intergenic 20.0%
!! CACAAAACAAAAATTGAATT+AGG + chr8_3:56336225-56336244 None:intergenic 20.0%
!! TTTCAAAAAACTATAAGAGT+GGG + chr8_3:56336388-56336407 None:intergenic 20.0%
!!! TTTTCAAAAAACTATAAGAG+TGG + chr8_3:56336389-56336408 None:intergenic 20.0%
!! TGAAAAATAACCATAGAATA+AGG + chr8_3:56337608-56337627 None:intergenic 20.0%
!! TAATAAAATGGCAAATATCA+AGG - chr8_3:56338034-56338053 Msa1296610:five_prime_UTR 20.0%
!!! TGTTTGTTTTTTTCTTGCTA+CGG + chr8_3:56328470-56328489 None:intergenic 25.0%
!! TATGAAATTGCTTCCATTTT+TGG + chr8_3:56328599-56328618 None:intergenic 25.0%
! TATGATTATGAGTATGGTTA+TGG + chr8_3:56328805-56328824 None:intergenic 25.0%
!!! AGCTTTTGCAACTATTTTTA+TGG - chr8_3:56329341-56329360 Msa1296610:CDS 25.0%
!!! GCTTTTGCAACTATTTTTAT+GGG - chr8_3:56329342-56329361 Msa1296610:CDS 25.0%
!!! CTTTTGCAACTATTTTTATG+GGG - chr8_3:56329343-56329362 Msa1296610:CDS 25.0%
! ATGTTTAATCTTGCACATAT+TGG - chr8_3:56329396-56329415 Msa1296610:intron 25.0%
! AAATACATTATGGTCGTATT+TGG - chr8_3:56329439-56329458 Msa1296610:intron 25.0%
!!! TTCTAAGATAGAATCAATTC+CGG - chr8_3:56329644-56329663 Msa1296610:CDS 25.0%
!! TTTTCATATACTATCATGGA+CGG - chr8_3:56329840-56329859 Msa1296610:intron 25.0%
!! TCTTATTTGAGTTTATCTAC+AGG + chr8_3:56329961-56329980 None:intergenic 25.0%
!! ATTTGATTTCAAATACCAGA+GGG - chr8_3:56330171-56330190 Msa1296610:intron 25.0%
!!! GTTTTGGAATTTTAATTGCT+TGG - chr8_3:56330254-56330273 Msa1296610:intron 25.0%
!! GAAATCATTTCAACTTTTGA+TGG - chr8_3:56330388-56330407 Msa1296610:intron 25.0%
!!! AATTTTAGCCTTTGTTAAAG+TGG - chr8_3:56330741-56330760 Msa1296610:intron 25.0%
! AAACTTATCCACTTTAACAA+AGG + chr8_3:56330752-56330771 None:intergenic 25.0%
! GTGGATAAGTTTATTAATGT+TGG - chr8_3:56330760-56330779 Msa1296610:intron 25.0%
! GATAAGTTTATTAATGTTGG+TGG - chr8_3:56330763-56330782 Msa1296610:intron 25.0%
! AGAATGGCAATAATAGTATT+TGG - chr8_3:56330806-56330825 Msa1296610:intron 25.0%
! GAATGGCAATAATAGTATTT+GGG - chr8_3:56330807-56330826 Msa1296610:intron 25.0%
! AATGGCAATAATAGTATTTG+GGG - chr8_3:56330808-56330827 Msa1296610:intron 25.0%
! CAATATTAATAATGTGTCAG+TGG - chr8_3:56330922-56330941 Msa1296610:CDS 25.0%
!!! TATTATTTTAGGAGGATTAC+TGG - chr8_3:56330998-56331017 Msa1296610:CDS 25.0%
! AAAATGAAACTTCCAAACAT+AGG + chr8_3:56331211-56331230 None:intergenic 25.0%
! GTACAAAATTATTTCATCAC+AGG - chr8_3:56331426-56331445 Msa1296610:intron 25.0%
!!! AAAAGAATTTAAGAAGTACC+TGG + chr8_3:56331643-56331662 None:intergenic 25.0%
! ATTTGTAAACTAATCATCTG+TGG - chr8_3:56331704-56331723 Msa1296610:intron 25.0%
! TTTGTAAACTAATCATCTGT+GGG - chr8_3:56331705-56331724 Msa1296610:intron 25.0%
! AGTATAGTATTAATGAACTG+CGG + chr8_3:56332220-56332239 None:intergenic 25.0%
! AGTGTATTTAGATTAGATAC+TGG + chr8_3:56332461-56332480 None:intergenic 25.0%
! AAATTCGTGCTTATATTTCT+GGG - chr8_3:56332672-56332691 Msa1296610:intron 25.0%
! AAAACTTCACTTATCATTTG+TGG + chr8_3:56332858-56332877 None:intergenic 25.0%
! GAAATAAAGGGAAAAGAAAA+TGG + chr8_3:56332932-56332951 None:intergenic 25.0%
!!! AAAGAGATGATGGAAATAAA+GGG + chr8_3:56332944-56332963 None:intergenic 25.0%
!!! AAAAGAGATGATGGAAATAA+AGG + chr8_3:56332945-56332964 None:intergenic 25.0%
!! ACTGTTAATAATGCTTTGTT+TGG + chr8_3:56332979-56332998 None:intergenic 25.0%
! TATCAATAAGCTGAATTGAA+TGG - chr8_3:56333148-56333167 Msa1296610:intron 25.0%
! AATTCTAAACTTCAGAAAGT+GGG + chr8_3:56333217-56333236 None:intergenic 25.0%
!!! TTCTGAAGTTTAGAATTGAA+TGG - chr8_3:56333220-56333239 Msa1296610:intron 25.0%
!! TTTTATCAAATGCAATGGTA+TGG + chr8_3:56333449-56333468 None:intergenic 25.0%
! CATCATTCATCTATTTATTG+AGG - chr8_3:56333724-56333743 Msa1296610:intron 25.0%
! ACATTCAAGATTGAATTGAA+TGG + chr8_3:56333858-56333877 None:intergenic 25.0%
!! TTTTCTGTAAAATGAATTGC+AGG - chr8_3:56333957-56333976 Msa1296610:intron 25.0%
! TTTCTGTAAAATGAATTGCA+GGG - chr8_3:56333958-56333977 Msa1296610:intron 25.0%
! AAGTGTACCATGAAAAAAAT+GGG + chr8_3:56334191-56334210 None:intergenic 25.0%
! AAAGTGTACCATGAAAAAAA+TGG + chr8_3:56334192-56334211 None:intergenic 25.0%
! GTGCTAACTATATGTTATAA+TGG - chr8_3:56334275-56334294 Msa1296610:intron 25.0%
! CTTATAACTGAATACTTCAT+AGG + chr8_3:56334303-56334322 None:intergenic 25.0%
! ATCTGAAGATGAATCAAAAA+AGG - chr8_3:56334489-56334508 Msa1296610:intron 25.0%
! TTTGATATGCTAAAAAACAG+AGG + chr8_3:56334868-56334887 None:intergenic 25.0%
!!! GAGATTTAATGTGTTTTGTT+TGG + chr8_3:56335047-56335066 None:intergenic 25.0%
!!! CACATCAATTTTTTTGCTTT+AGG + chr8_3:56335168-56335187 None:intergenic 25.0%
! CTAAAGCAAAAAAATTGATG+TGG - chr8_3:56335166-56335185 Msa1296610:intron 25.0%
!! TTGACCATGAATTCAAATTT+TGG + chr8_3:56335249-56335268 None:intergenic 25.0%
!! AGGCCTCTAAAAAATTAATT+TGG + chr8_3:56335349-56335368 None:intergenic 25.0%
!! TTTCTTATTTCTCTCAATAC+GGG - chr8_3:56335886-56335905 Msa1296610:CDS 25.0%
!! TTATTATTGTGGGTACTTTT+TGG - chr8_3:56335973-56335992 Msa1296610:CDS 25.0%
!!! TATTATTGTGGGTACTTTTT+GGG - chr8_3:56335974-56335993 Msa1296610:CDS 25.0%
! ATCTAACATAAAAACATACG+AGG + chr8_3:56336273-56336292 None:intergenic 25.0%
!!! GGGATTTTTTTTATCAACAA+CGG - chr8_3:56336492-56336511 Msa1296610:intron 25.0%
! GCTTGATTTAATAACTTCAA+CGG + chr8_3:56336571-56336590 None:intergenic 25.0%
!!! AACAATATCGGTTTTACTTT+GGG + chr8_3:56336705-56336724 None:intergenic 25.0%
! AAAAAGGACGTCATTTAATT+CGG + chr8_3:56336787-56336806 None:intergenic 25.0%
!!! ACTGTTTTTACTTTTGTAAC+AGG - chr8_3:56336827-56336846 Msa1296610:intron 25.0%
!!! CTGTTTTTACTTTTGTAACA+GGG - chr8_3:56336828-56336847 Msa1296610:intron 25.0%
!!! TGTTTTTACTTTTGTAACAG+GGG - chr8_3:56336829-56336848 Msa1296610:intron 25.0%
! ATGTCTTCAAATTTCGTTTA+GGG + chr8_3:56337447-56337466 None:intergenic 25.0%
! TTCTTCAATTTACGAAAAAC+TGG + chr8_3:56337485-56337504 None:intergenic 25.0%
! CATGATATATTACAGTTGAT+TGG - chr8_3:56337746-56337765 Msa1296610:five_prime_UTR 25.0%
! GACGCTATCTTAAAATAATA+GGG + chr8_3:56337982-56338001 None:intergenic 25.0%
!!! GTTTGTTTTTTTCTTGCTAC+GGG + chr8_3:56328469-56328488 None:intergenic 30.0%
TGAGAGAATCAGAGTTTATT+AGG + chr8_3:56328520-56328539 None:intergenic 30.0%
!!! CCATTTTTGGTAGTTGAAAT+TGG + chr8_3:56328586-56328605 None:intergenic 30.0%
CCAATTTCAACTACCAAAAA+TGG - chr8_3:56328583-56328602 Msa1296610:three_prime_UTR 30.0%
AGAGAGGTTTGATAGAAATT+GGG + chr8_3:56328715-56328734 None:intergenic 30.0%
TAGAGAGGTTTGATAGAAAT+TGG + chr8_3:56328716-56328735 None:intergenic 30.0%
AACAACGAAGTTTATGATGA+TGG + chr8_3:56328760-56328779 None:intergenic 30.0%
AGTATGGTTATGGTTATGAT+CGG + chr8_3:56328795-56328814 None:intergenic 30.0%
!!! AAACTGATAATCGCTTTTTG+AGG + chr8_3:56328920-56328939 None:intergenic 30.0%
! AATTTGAAGTTGTTTGCGTT+TGG - chr8_3:56329541-56329560 Msa1296610:CDS 30.0%
!! TGTAGCTTTGAGTTTAAACA+TGG + chr8_3:56329615-56329634 None:intergenic 30.0%
TTGATTCTATCTTAGAAGCT+AGG + chr8_3:56329641-56329660 None:intergenic 30.0%
CACTTAATTAAGCCTATGTT+AGG + chr8_3:56329756-56329775 None:intergenic 30.0%
TTTCATATACTATCATGGAC+GGG - chr8_3:56329841-56329860 Msa1296610:intron 30.0%
!! GCACTTAACTTGTTAAACTA+GGG + chr8_3:56329999-56330018 None:intergenic 30.0%
!! AGCACTTAACTTGTTAAACT+AGG + chr8_3:56330000-56330019 None:intergenic 30.0%
! CATTTGATTTCAAATACCAG+AGG - chr8_3:56330170-56330189 Msa1296610:intron 30.0%
GCAGATTATTGAAGTGTAAT+CGG - chr8_3:56330509-56330528 Msa1296610:intron 30.0%
TTATTGAAGTGTAATCGGAA+TGG - chr8_3:56330514-56330533 Msa1296610:intron 30.0%
AGATGGTAGAATAATTGTGA+AGG - chr8_3:56330674-56330693 Msa1296610:intron 30.0%
! GAATAATTGTGAAGGTATGT+TGG - chr8_3:56330682-56330701 Msa1296610:intron 30.0%
!! TTATTAATGTTGGTGGTATG+AGG - chr8_3:56330770-56330789 Msa1296610:intron 30.0%
GTCAAACTAGTGATGTTAAT+GGG - chr8_3:56330883-56330902 Msa1296610:CDS 30.0%
TATTAATAATGTGTCAGTGG+CGG - chr8_3:56330925-56330944 Msa1296610:CDS 30.0%
AAACTTCCAAACATAGGTAT+TGG + chr8_3:56331205-56331224 None:intergenic 30.0%
! TGTTTACAGTGCAATTTTGT+TGG - chr8_3:56331389-56331408 Msa1296610:intron 30.0%
! GTTTACAGTGCAATTTTGTT+GGG - chr8_3:56331390-56331409 Msa1296610:intron 30.0%
TGAATAGACCTAAACTTCAA+AGG - chr8_3:56331512-56331531 Msa1296610:intron 30.0%
TTCCTTTGTGATTCAGTATT+AGG + chr8_3:56331843-56331862 None:intergenic 30.0%
AATAATAAGTGGAGTGATTC+AGG + chr8_3:56331985-56332004 None:intergenic 30.0%
ATGAATGGGGAAATAATAAG+TGG + chr8_3:56331996-56332015 None:intergenic 30.0%
TCTTCATCCTTGTATAGATT+TGG - chr8_3:56332177-56332196 Msa1296610:intron 30.0%
CTTCATCCTTGTATAGATTT+GGG - chr8_3:56332178-56332197 Msa1296610:intron 30.0%
!!! AACTTATACCTTTTTTGCAC+AGG + chr8_3:56332429-56332448 None:intergenic 30.0%
! ACCATTTCATTCTAGCTAAA+GGG + chr8_3:56332547-56332566 None:intergenic 30.0%
! TACCATTTCATTCTAGCTAA+AGG + chr8_3:56332548-56332567 None:intergenic 30.0%
GAAATTCGTGCTTATATTTC+TGG - chr8_3:56332671-56332690 Msa1296610:intron 30.0%
ATAGTTCTCTCTTCAAATGT+AGG - chr8_3:56332732-56332751 Msa1296610:intron 30.0%
TAGGAAGAGAAAAGATAGAA+AGG - chr8_3:56332751-56332770 Msa1296610:intron 30.0%
ACTTATCATTTGTGGTTGAA+TGG + chr8_3:56332850-56332869 None:intergenic 30.0%
!! GTTTTAACCAAGTGTAAACT+TGG - chr8_3:56332997-56333016 Msa1296610:CDS 30.0%
! TACTGATTAAAGAAACGTTC+CGG - chr8_3:56333117-56333136 Msa1296610:CDS 30.0%
GCTTATTGATAGATCTATTC+CGG + chr8_3:56333139-56333158 None:intergenic 30.0%
ATTCTAAACTTCAGAAAGTG+GGG + chr8_3:56333216-56333235 None:intergenic 30.0%
CAATTCTAAACTTCAGAAAG+TGG + chr8_3:56333218-56333237 None:intergenic 30.0%
AAACACAAACTTCAGAAAGT+GGG + chr8_3:56333289-56333308 None:intergenic 30.0%
!! TTTCTGAAGTTTGTGTTTGT+CGG - chr8_3:56333291-56333310 Msa1296610:intron 30.0%
ATGGGATGTTTGTTTATTTG+TGG - chr8_3:56333351-56333370 Msa1296610:intron 30.0%
TGGGATGTTTGTTTATTTGT+GGG - chr8_3:56333352-56333371 Msa1296610:intron 30.0%
ACCATTGCATTTGATAAAAC+AGG - chr8_3:56333450-56333469 Msa1296610:intron 30.0%
CCATTGCATTTGATAAAACA+GGG - chr8_3:56333451-56333470 Msa1296610:intron 30.0%
! CTTTTGTATGTTTCTCGATT+TGG - chr8_3:56333770-56333789 Msa1296610:intron 30.0%
!! TATGTTTCTCGATTTGGTAT+TGG - chr8_3:56333776-56333795 Msa1296610:intron 30.0%
! AATTTTCAACAGAGACAGAA+GGG + chr8_3:56334015-56334034 None:intergenic 30.0%
! AAATTTTCAACAGAGACAGA+AGG + chr8_3:56334016-56334035 None:intergenic 30.0%
!! GAAAATTTTGAGTACTTTCC+TGG - chr8_3:56334028-56334047 Msa1296610:intron 30.0%
GTAGTGTAAACTATAATGCT+TGG + chr8_3:56334116-56334135 None:intergenic 30.0%
! ACTAACATTAGTTTCAGACT+CGG + chr8_3:56334257-56334276 None:intergenic 30.0%
ACAAGTAGAATGACTCAAAT+TGG - chr8_3:56334378-56334397 Msa1296610:intron 30.0%
AGATGAATCAAAAAAGGTCA+AGG - chr8_3:56334495-56334514 Msa1296610:intron 30.0%
GCTATTAATGCATCTTCTTA+TGG - chr8_3:56334520-56334539 Msa1296610:intron 30.0%
GTCATATACTTAGTCTCTTA+CGG - chr8_3:56334593-56334612 Msa1296610:intron 30.0%
!! AATTTTGATGGTTTGTACTC+TGG - chr8_3:56334733-56334752 Msa1296610:intron 30.0%
!! TCAAAAGCACCTATATTTGT+TGG - chr8_3:56334883-56334902 Msa1296610:intron 30.0%
!! CAAAAGCACCTATATTTGTT+GGG - chr8_3:56334884-56334903 Msa1296610:intron 30.0%
!! AAAAGCACCTATATTTGTTG+GGG - chr8_3:56334885-56334904 Msa1296610:intron 30.0%
CTGTAGAAGTTGAAAAACTT+TGG + chr8_3:56334977-56334996 None:intergenic 30.0%
! TTGTTATTGTTGTTGTGAAC+TGG - chr8_3:56335120-56335139 Msa1296610:intron 30.0%
! TGTTATTGTTGTTGTGAACT+GGG - chr8_3:56335121-56335140 Msa1296610:intron 30.0%
GAGACCAAAATTTGAATTCA+TGG - chr8_3:56335242-56335261 Msa1296610:intron 30.0%
! AACAGTAATTGAGACCTTTT+TGG - chr8_3:56335267-56335286 Msa1296610:intron 30.0%
AGCTTAACTGATTACCAAAA+AGG + chr8_3:56335284-56335303 None:intergenic 30.0%
AAAGGATATCTCAAGAGATA+TGG - chr8_3:56335711-56335730 Msa1296610:intron 30.0%
AAGGATATCTCAAGAGATAT+GGG - chr8_3:56335712-56335731 Msa1296610:intron 30.0%
! ATCTTTTGTCTCTGATAACA+TGG - chr8_3:56335763-56335782 Msa1296610:intron 30.0%
GGAAAAATTAGGATTGTAAG+AGG + chr8_3:56336184-56336203 None:intergenic 30.0%
GATTTAATAACTTCAACGGA+CGG + chr8_3:56336567-56336586 None:intergenic 30.0%
AAAACACGAAAAAGTCCAAA+AGG + chr8_3:56336612-56336631 None:intergenic 30.0%
!!! CAACAATATCGGTTTTACTT+TGG + chr8_3:56336706-56336725 None:intergenic 30.0%
CTAAGGTAGAACAACAATAT+CGG + chr8_3:56336717-56336736 None:intergenic 30.0%
AAAAGGACGTCATTTAATTC+GGG + chr8_3:56336786-56336805 None:intergenic 30.0%
TTGAGCACAAAACTGTAAAA+AGG + chr8_3:56336803-56336822 None:intergenic 30.0%
!! GTTTTTACTTTTGTAACAGG+GGG - chr8_3:56336830-56336849 Msa1296610:intron 30.0%
AGAAAAAAAAAATGTGGCTC+TGG - chr8_3:56337062-56337081 Msa1296610:intron 30.0%
! TACGTAATCTTTTCAGCAAT+TGG - chr8_3:56337101-56337120 Msa1296610:intron 30.0%
ATTTCTTCCATTGTGGATAA+CGG - chr8_3:56337222-56337241 Msa1296610:intron 30.0%
ATTCTGTTAACAAGGACAAA+TGG + chr8_3:56337318-56337337 None:intergenic 30.0%
TCACATTCATTCTGTTAACA+AGG + chr8_3:56337326-56337345 None:intergenic 30.0%
! TGTTCAAGTTATTCACTACA+TGG + chr8_3:56337389-56337408 None:intergenic 30.0%
TGTAAACACAGAAAAGAAGA+GGG + chr8_3:56337420-56337439 None:intergenic 30.0%
ATGTAAACACAGAAAAGAAG+AGG + chr8_3:56337421-56337440 None:intergenic 30.0%
GATGTCTTCAAATTTCGTTT+AGG + chr8_3:56337448-56337467 None:intergenic 30.0%
TATATTACAGTTGATTGGCA+AGG - chr8_3:56337751-56337770 Msa1296610:five_prime_UTR 30.0%
TGTTATATTTGTCCTAAGAG+AGG + chr8_3:56337792-56337811 None:intergenic 30.0%
TCTCTTAGGACAAATATAAC+AGG - chr8_3:56337791-56337810 Msa1296610:five_prime_UTR 30.0%
AGTAGAGAAATAGTGTATTG+CGG - chr8_3:56337865-56337884 Msa1296610:five_prime_UTR 30.0%
AATACCCCTTGTAAATGTAT+AGG - chr8_3:56337926-56337945 Msa1296610:five_prime_UTR 30.0%
AGATGCCTATACATTTACAA+GGG + chr8_3:56337934-56337953 None:intergenic 30.0%
AAGATGCCTATACATTTACA+AGG + chr8_3:56337935-56337954 None:intergenic 30.0%
GGACGCTATCTTAAAATAAT+AGG + chr8_3:56337983-56338002 None:intergenic 30.0%
ATTCCATTTGAAAGGCAAAA+CGG + chr8_3:56338015-56338034 None:intergenic 30.0%
AACAACTGCACCACAATAAT+AGG - chr8_3:56328486-56328505 Msa1296610:three_prime_UTR 35.0%
GGACATATGACCTATTATTG+TGG + chr8_3:56328499-56328518 None:intergenic 35.0%
GTGAGTGAAATTTGGTAGAA+GGG + chr8_3:56328628-56328647 None:intergenic 35.0%
AGTGAGTGAAATTTGGTAGA+AGG + chr8_3:56328629-56328648 None:intergenic 35.0%
GATGTGAAGTGAGTGAAATT+TGG + chr8_3:56328636-56328655 None:intergenic 35.0%
! GGATTTGATTCTTGTGGTTT+TGG + chr8_3:56328663-56328682 None:intergenic 35.0%
GTTAGAGGATTTGATTCTTG+TGG + chr8_3:56328669-56328688 None:intergenic 35.0%
GAGAGGTTTGATAGAAATTG+GGG + chr8_3:56328714-56328733 None:intergenic 35.0%
AGGAATTTGGAAGAATAGAG+AGG + chr8_3:56328731-56328750 None:intergenic 35.0%
! ATGATGGAGAATGAGGAATT+TGG + chr8_3:56328744-56328763 None:intergenic 35.0%
!! GTTTATGATGATGGAGAATG+AGG + chr8_3:56328751-56328770 None:intergenic 35.0%
! GATGATGATGATGATGATGA+TGG + chr8_3:56328853-56328872 None:intergenic 35.0%
ACAGGTTTGATGAGTGATTT+GGG + chr8_3:56329055-56329074 None:intergenic 35.0%
ACTTGATGTGTATCAGGTTT+CGG - chr8_3:56329251-56329270 Msa1296610:intron 35.0%
GATGCTCTAATTGAAATGAG+TGG - chr8_3:56329282-56329301 Msa1296610:intron 35.0%
!! TATTTTTATGGGGAACGCTT+TGG - chr8_3:56329353-56329372 Msa1296610:CDS 35.0%
TAAGATAGAATCAATTCCGG+AGG - chr8_3:56329647-56329666 Msa1296610:CDS 35.0%
! GTAGTCAAAATTGATTCTGG+AGG + chr8_3:56329720-56329739 None:intergenic 35.0%
! GGAGTAGTCAAAATTGATTC+TGG + chr8_3:56329723-56329742 None:intergenic 35.0%
!!! AATTTTGACTACTCCAAACG+TGG - chr8_3:56329728-56329747 Msa1296610:intron 35.0%
GTTAAACTAGGGCATATGTT+TGG + chr8_3:56329988-56330007 None:intergenic 35.0%
GTATTTCACAAGTCGTTCAA+TGG - chr8_3:56330069-56330088 Msa1296610:intron 35.0%
! GGTTGATGTTAAAGAGTTGA+AGG - chr8_3:56330090-56330109 Msa1296610:intron 35.0%
TCAAGAACAAGTGCAAATTC+TGG + chr8_3:56330124-56330143 None:intergenic 35.0%
ATATGATTGCTTCCTTGTGT+TGG - chr8_3:56330313-56330332 Msa1296610:intron 35.0%
TATGATTGCTTCCTTGTGTT+GGG - chr8_3:56330314-56330333 Msa1296610:intron 35.0%
!!! TGGGTTTTGAGGTTTTCAAA+TGG - chr8_3:56330333-56330352 Msa1296610:intron 35.0%
!! TTTGAGGTTTTCAAATGGCT+AGG - chr8_3:56330338-56330357 Msa1296610:intron 35.0%
!! CATTTCAACTTTTGATGGCT+TGG - chr8_3:56330393-56330412 Msa1296610:intron 35.0%
TGGAAAACTTCACAATCTAC+AGG + chr8_3:56330558-56330577 None:intergenic 35.0%
! GTAGATTGTGAAGTTTTCCA+CGG - chr8_3:56330558-56330577 Msa1296610:intron 35.0%
!! TTGTGATGGATGAAACAGTT+AGG - chr8_3:56330852-56330871 Msa1296610:CDS 35.0%
ATGAAACAGTTAGGAGAAGA+AGG - chr8_3:56330861-56330880 Msa1296610:CDS 35.0%
GGTCAAACTAGTGATGTTAA+TGG - chr8_3:56330882-56330901 Msa1296610:CDS 35.0%
AAACTAGTGATGTTAATGGG+TGG - chr8_3:56330886-56330905 Msa1296610:CDS 35.0%
! AACTAGTGATGTTAATGGGT+GGG - chr8_3:56330887-56330906 Msa1296610:CDS 35.0%
!! TGTGTAAATCGTTAGTTCTG+AGG - chr8_3:56331029-56331048 Msa1296610:intron 35.0%
!! GAATTGCTGTATGTTTTTGC+TGG - chr8_3:56331118-56331137 Msa1296610:intron 35.0%
AACTTATCCTTAGACATGCT+TGG + chr8_3:56331273-56331292 None:intergenic 35.0%
TTGCTAGAGATTGTAATGCT+AGG - chr8_3:56331291-56331310 Msa1296610:intron 35.0%
! CATTGCTGACAGTCTAAAAT+TGG + chr8_3:56331320-56331339 None:intergenic 35.0%
ATAGACCTAAACTTCAAAGG+TGG - chr8_3:56331515-56331534 Msa1296610:intron 35.0%
! TCAATTGCTATTGCTGTTCT+TGG - chr8_3:56331583-56331602 Msa1296610:intron 35.0%
TTGGTCCACTTGTATTTAAG+TGG - chr8_3:56331602-56331621 Msa1296610:intron 35.0%
AATGGCCACTTAAATACAAG+TGG + chr8_3:56331610-56331629 None:intergenic 35.0%
TGTGATTCAGTATTAGGAGA+GGG + chr8_3:56331837-56331856 None:intergenic 35.0%
TTGTGATTCAGTATTAGGAG+AGG + chr8_3:56331838-56331857 None:intergenic 35.0%
CTCCTAATACTGAATCACAA+AGG - chr8_3:56331838-56331857 Msa1296610:intron 35.0%
! TAGAGAAATGGTGAGGTTTT+GGG + chr8_3:56331934-56331953 None:intergenic 35.0%
! ATAGAGAAATGGTGAGGTTT+TGG + chr8_3:56331935-56331954 None:intergenic 35.0%
GAAAGAATAGAGAAATGGTG+AGG + chr8_3:56331941-56331960 None:intergenic 35.0%
CAGTGAGCACTATATAAAGT+TGG + chr8_3:56332256-56332275 None:intergenic 35.0%
GGGCTAACAAAAATTCAAAG+CGG + chr8_3:56332527-56332546 None:intergenic 35.0%
TACTTCACAACTTAAACACC+AGG + chr8_3:56332572-56332591 None:intergenic 35.0%
AAGAACACAAACTGTACAGA+TGG + chr8_3:56332601-56332620 None:intergenic 35.0%
TGGGTTTATCAGTTTAGTTG+AGG - chr8_3:56332691-56332710 Msa1296610:intron 35.0%
ATCAGTTTAGTTGAGGAAAG+CGG - chr8_3:56332698-56332717 Msa1296610:intron 35.0%
AAGAATACATGTTTGCATGC+AGG + chr8_3:56332899-56332918 None:intergenic 35.0%
GCAGAAAGAAAAAGAGATGA+TGG + chr8_3:56332954-56332973 None:intergenic 35.0%
TCAGTTTCCAAGTTTACACT+TGG + chr8_3:56333007-56333026 None:intergenic 35.0%
AACACAAACTTCAGAAAGTG+GGG + chr8_3:56333288-56333307 None:intergenic 35.0%
CAAACACAAACTTCAGAAAG+TGG + chr8_3:56333290-56333309 None:intergenic 35.0%
! CCCTGTTTTATCAAATGCAA+TGG + chr8_3:56333454-56333473 None:intergenic 35.0%
CAAAATGATACCTTCCAATG+GGG + chr8_3:56333632-56333651 None:intergenic 35.0%
! AATTGTTACTTGTACGAGGT+TGG + chr8_3:56333683-56333702 None:intergenic 35.0%
! GATTTGGTATTGGACTATTG+TGG - chr8_3:56333786-56333805 Msa1296610:intron 35.0%
CTCAAAATACTGACAATGCA+TGG + chr8_3:56334138-56334157 None:intergenic 35.0%
CCAAGAGAAATGTATGCAAT+AGG + chr8_3:56334163-56334182 None:intergenic 35.0%
CCTATTGCATACATTTCTCT+TGG - chr8_3:56334160-56334179 Msa1296610:CDS 35.0%
!!! GGAGAATCCCATTTTTTTCA+TGG - chr8_3:56334181-56334200 Msa1296610:CDS 35.0%
!! ATTTTGTTATAGTCAGGAGC+TGG - chr8_3:56334406-56334425 Msa1296610:intron 35.0%
!! AACCTATTGAAAGCATCACT+TGG - chr8_3:56334436-56334455 Msa1296610:intron 35.0%
!! ACCTATTGAAAGCATCACTT+GGG - chr8_3:56334437-56334456 Msa1296610:intron 35.0%
TAAACAGAACAGTACAAGAC+AGG - chr8_3:56334645-56334664 Msa1296610:intron 35.0%
AAACAGAACAGTACAAGACA+GGG - chr8_3:56334646-56334665 Msa1296610:intron 35.0%
!! GCGTACTTTGGTAATTTTGA+TGG - chr8_3:56334721-56334740 Msa1296610:intron 35.0%
TATGCTAAAAAACAGAGGAC+TGG + chr8_3:56334863-56334882 None:intergenic 35.0%
!! ATATCTCCAGCTTTAGAAGT+TGG - chr8_3:56334944-56334963 Msa1296610:CDS 35.0%
!!! ATGTGTTTTGTTTGGGAAGA+GGG + chr8_3:56335039-56335058 None:intergenic 35.0%
!!! AATGTGTTTTGTTTGGGAAG+AGG + chr8_3:56335040-56335059 None:intergenic 35.0%
TTTAGGCCTCTTAATCTGTT+AGG + chr8_3:56335151-56335170 None:intergenic 35.0%
!! GCTTTAGGTCGCAAAATTTT+AGG + chr8_3:56335381-56335400 None:intergenic 35.0%
! CTTGTCAACATTTTCCTTCT+GGG - chr8_3:56335468-56335487 Msa1296610:intron 35.0%
TGAATAACATCAAAAACCCC+TGG + chr8_3:56335553-56335572 None:intergenic 35.0%
AGATAAGTTGCGTCATGTAA+AGG - chr8_3:56335693-56335712 Msa1296610:intron 35.0%
TCCATAATTCATGTCATACC+CGG - chr8_3:56335912-56335931 Msa1296610:CDS 35.0%
AGGTACTTAACCATAAGTAC+CGG + chr8_3:56335934-56335953 None:intergenic 35.0%
AACAACGGTGACACTTATAA+TGG - chr8_3:56336507-56336526 Msa1296610:intron 35.0%
TAAGACAACAGAGTCAACTA+AGG + chr8_3:56336734-56336753 None:intergenic 35.0%
CATTCTGTATTGCCAAATCT+CGG - chr8_3:56336999-56337018 Msa1296610:intron 35.0%
GATTAAGCAAAATGTAGCTC+TGG - chr8_3:56337156-56337175 Msa1296610:intron 35.0%
!!! TTTTGGGATTTCTTCCATTG+TGG - chr8_3:56337215-56337234 Msa1296610:intron 35.0%
CGATCTTGTTACTATTTGTC+AGG - chr8_3:56337271-56337290 Msa1296610:intron 35.0%
GTAAACACAGAAAAGAAGAG+GGG + chr8_3:56337419-56337438 None:intergenic 35.0%
TTCTCTCGAACCTTATTCTA+TGG - chr8_3:56337595-56337614 Msa1296610:five_prime_UTR 35.0%
TCAATATGTAACATGCATGC+AGG - chr8_3:56337643-56337662 Msa1296610:five_prime_UTR 35.0%
TGGTTCATTTAAACCACGTA+TGG + chr8_3:56337711-56337730 None:intergenic 35.0%
CTGTAATATATCATGCTTCC+AGG + chr8_3:56337741-56337760 None:intergenic 35.0%
GATGCCTATACATTTACAAG+GGG + chr8_3:56337933-56337952 None:intergenic 35.0%
!! TCTTTTTCGTCCCAAAGTAT+TGG - chr8_3:56337951-56337970 Msa1296610:five_prime_UTR 35.0%
TAGGGAATGTCCAATACTTT+GGG + chr8_3:56337964-56337983 None:intergenic 35.0%
ATAGGGAATGTCCAATACTT+TGG + chr8_3:56337965-56337984 None:intergenic 35.0%
TTCCATTTGAAAGGCAAAAC+GGG + chr8_3:56338014-56338033 None:intergenic 35.0%
!!! TGATTCTTGTGGTTTTGGTG+TGG + chr8_3:56328658-56328677 None:intergenic 40.0%
AATAGGAAAAGCGAGGTTAG+AGG + chr8_3:56328684-56328703 None:intergenic 40.0%
GTTATGATCGGTGTGATTTG+CGG + chr8_3:56328783-56328802 None:intergenic 40.0%
! GTCAATCCATTTGGTAGCTT+TGG + chr8_3:56328945-56328964 None:intergenic 40.0%
ATTCGCTAGGTCAATCCATT+TGG + chr8_3:56328954-56328973 None:intergenic 40.0%
TTGACCTAGCGAATTTCTTG+AGG - chr8_3:56328960-56328979 Msa1296610:intron 40.0%
TGACCTAGCGAATTTCTTGA+GGG - chr8_3:56328961-56328980 Msa1296610:intron 40.0%
! AGTGATTTGGGCAAAGTATG+AGG + chr8_3:56329043-56329062 None:intergenic 40.0%
GACAGGTTTGATGAGTGATT+TGG + chr8_3:56329056-56329075 None:intergenic 40.0%
!!! AGAATGAACGAGTTTTGGAC+AGG + chr8_3:56329073-56329092 None:intergenic 40.0%
TGTCCAAAACTCGTTCATTC+TGG - chr8_3:56329072-56329091 Msa1296610:intron 40.0%
TAGTTTCTTACCCCAACCAA+CGG + chr8_3:56329106-56329125 None:intergenic 40.0%
ATGCTCACTTGATGTGTATC+AGG - chr8_3:56329245-56329264 Msa1296610:intron 40.0%
GCTCTAATTGAAATGAGTGG+TGG - chr8_3:56329285-56329304 Msa1296610:intron 40.0%
AGTGAGCATCCATGTGTTAA+TGG - chr8_3:56329311-56329330 Msa1296610:intron 40.0%
CATCCATGTGTTAATGGCAA+TGG - chr8_3:56329317-56329336 Msa1296610:intron 40.0%
!!! AGTGGCATTGATTTTTCCTC+CGG + chr8_3:56329666-56329685 None:intergenic 40.0%
TTGACATGTTTGTTCTCGAG+TGG + chr8_3:56329684-56329703 None:intergenic 40.0%
GCTTGGGAGAGTTTATTTAC+AGG + chr8_3:56329921-56329940 None:intergenic 40.0%
ATGATCCCACAGTTATATCG+TGG + chr8_3:56330204-56330223 None:intergenic 40.0%
!! TCCAAAACTTGTTACCTCTC+CGG + chr8_3:56330242-56330261 None:intergenic 40.0%
AAACCTCAAAACCCAACACA+AGG + chr8_3:56330328-56330347 None:intergenic 40.0%
CAAGTGCTCAATGGTAATTG+TGG + chr8_3:56330589-56330608 None:intergenic 40.0%
ATTACCATTGAGCACTTGAC+AGG - chr8_3:56330591-56330610 Msa1296610:intron 40.0%
TTACCATTGAGCACTTGACA+GGG - chr8_3:56330592-56330611 Msa1296610:intron 40.0%
AGGAACTCTATCTCCAACTT+TGG + chr8_3:56330637-56330656 None:intergenic 40.0%
AAAGTTGGAGATAGAGTTCC+TGG - chr8_3:56330636-56330655 Msa1296610:intron 40.0%
TAGTACAGCAAGAGCTGAAA+TGG + chr8_3:56330708-56330727 None:intergenic 40.0%
AGGAAGTGGAACAGAAAGAA+TGG - chr8_3:56330790-56330809 Msa1296610:intron 40.0%
! TATTTGGGGTTTGTGTACCA+TGG - chr8_3:56330822-56330841 Msa1296610:intron 40.0%
ACCATGGTGACTAATTGTGA+TGG - chr8_3:56330838-56330857 Msa1296610:CDS 40.0%
TCCATCACAATTAGTCACCA+TGG + chr8_3:56330842-56330861 None:intergenic 40.0%
CAAGCTTCAGAAGAGTAACA+AGG + chr8_3:56330966-56330985 None:intergenic 40.0%
!! CTTGTTACTCTTCTGAAGCT+TGG - chr8_3:56330964-56330983 Msa1296610:CDS 40.0%
GTGATTGAGATGAATGGAGT+TGG - chr8_3:56331061-56331080 Msa1296610:intron 40.0%
CACTGACCAATACCTATGTT+TGG - chr8_3:56331196-56331215 Msa1296610:intron 40.0%
TCAAGTTCCAAGCATGTCTA+AGG - chr8_3:56331263-56331282 Msa1296610:intron 40.0%
CATCACAGGTAACAAAGACA+TGG - chr8_3:56331440-56331459 Msa1296610:intron 40.0%
ACAGGTAACAAAGACATGGA+AGG - chr8_3:56331444-56331463 Msa1296610:intron 40.0%
GTACCTGGTGTACTAAAGAA+TGG + chr8_3:56331628-56331647 None:intergenic 40.0%
GGTGGGAAAGAATAGAGAAA+TGG + chr8_3:56331946-56331965 None:intergenic 40.0%
!! GCACACAAGATAGTATTGGT+GGG + chr8_3:56331963-56331982 None:intergenic 40.0%
TCAGGCACACAAGATAGTAT+TGG + chr8_3:56331967-56331986 None:intergenic 40.0%
AAGGACTGTGTATGTATGCA+AGG + chr8_3:56332121-56332140 None:intergenic 40.0%
AACAAGAGCTATGCTCAAGT+AGG + chr8_3:56332157-56332176 None:intergenic 40.0%
TCCTTGTATAGATTTGGGCA+AGG - chr8_3:56332183-56332202 Msa1296610:intron 40.0%
CCTTGTATAGATTTGGGCAA+GGG - chr8_3:56332184-56332203 Msa1296610:intron 40.0%
TAATGAACTGCGGAAGTCAA+GGG + chr8_3:56332210-56332229 None:intergenic 40.0%
TTAATGAACTGCGGAAGTCA+AGG + chr8_3:56332211-56332230 None:intergenic 40.0%
GTTCTATCTACAGAGCCTTA+GGG - chr8_3:56332336-56332355 Msa1296610:intron 40.0%
AATCAGCTCCTGTGCAAAAA+AGG - chr8_3:56332418-56332437 Msa1296610:intron 40.0%
GCCCTTTAGCTAGAATGAAA+TGG - chr8_3:56332543-56332562 Msa1296610:CDS 40.0%
GCTAGAATGAAATGGTATCC+TGG - chr8_3:56332551-56332570 Msa1296610:CDS 40.0%
TCAGTTTAGTTGAGGAAAGC+GGG - chr8_3:56332699-56332718 Msa1296610:intron 40.0%
ATGCAGGTAAGAGGAAAGAA+AGG + chr8_3:56332883-56332902 None:intergenic 40.0%
TTGCAGGGCATATTACTCAA+AGG - chr8_3:56333393-56333412 Msa1296610:intron 40.0%
! AAAACAGGGACATTGACTAC+TGG - chr8_3:56333465-56333484 Msa1296610:intron 40.0%
!! TACTGGTGGACTTGTATTCA+AGG - chr8_3:56333482-56333501 Msa1296610:intron 40.0%
AAGGCAATTGAGCCTGTTTA+CGG - chr8_3:56333501-56333520 Msa1296610:intron 40.0%
! CCACAATTGTTACTTGTACG+AGG + chr8_3:56333687-56333706 None:intergenic 40.0%
CCTCGTACAAGTAACAATTG+TGG - chr8_3:56333684-56333703 Msa1296610:intron 40.0%
GTAACAATTGTGGCTGTCAT+TGG - chr8_3:56333694-56333713 Msa1296610:intron 40.0%
ATATAGCACGAACTGCAACA+TGG - chr8_3:56333904-56333923 Msa1296610:intron 40.0%
TAAAATGAATTGCAGGGCTG+TGG - chr8_3:56333964-56333983 Msa1296610:intron 40.0%
CTGTGGTTGAACATAGTGAA+GGG - chr8_3:56333981-56334000 Msa1296610:intron 40.0%
TTTGAGTACTTTCCTGGTAG+AGG - chr8_3:56334034-56334053 Msa1296610:intron 40.0%
TGCTGTTAACAGTAGCAGTA+AGG + chr8_3:56334060-56334079 None:intergenic 40.0%
TGCTACTGTTAACAGCATTG+AGG - chr8_3:56334063-56334082 Msa1296610:intron 40.0%
ACCCAAGTGATGCTTTCAAT+AGG + chr8_3:56334441-56334460 None:intergenic 40.0%
! GGAACATGAAAAGCGTACTT+TGG - chr8_3:56334709-56334728 Msa1296610:intron 40.0%
CTTGTCTCACTGTTTAGTGA+AGG - chr8_3:56334763-56334782 Msa1296610:intron 40.0%
ATTCCTGCCCCAACAAATAT+AGG + chr8_3:56334895-56334914 None:intergenic 40.0%
!! ATGAAGCCAACTTCTAAAGC+TGG + chr8_3:56334953-56334972 None:intergenic 40.0%
!!! TGTGTTTTGTTTGGGAAGAG+GGG + chr8_3:56335038-56335057 None:intergenic 40.0%
AGAGATGATGTTCACAACCA+GGG + chr8_3:56335435-56335454 None:intergenic 40.0%
CCAGAAGGAAAATGTTGACA+AGG + chr8_3:56335470-56335489 None:intergenic 40.0%
! CCTTGTCAACATTTTCCTTC+TGG - chr8_3:56335467-56335486 Msa1296610:intron 40.0%
! CATCAAGTGGTTAGTCAGTA+AGG + chr8_3:56335494-56335513 None:intergenic 40.0%
! TTCCGTGTGATGATGTTAAC+TGG - chr8_3:56335595-56335614 Msa1296610:intron 40.0%
CACCAGTTAACATCATCACA+CGG + chr8_3:56335600-56335619 None:intergenic 40.0%
ACATGACGCAACTTATCTTC+AGG + chr8_3:56335691-56335710 None:intergenic 40.0%
ACCGGGTATGACATGAATTA+TGG + chr8_3:56335916-56335935 None:intergenic 40.0%
GGTACTTAACCATAAGTACC+GGG + chr8_3:56335933-56335952 None:intergenic 40.0%
!!! GGGTACTTTTTGGGTAAGTA+CGG - chr8_3:56335983-56336002 Msa1296610:CDS 40.0%
!!! GGTACTTTTTGGGTAAGTAC+GGG - chr8_3:56335984-56336003 Msa1296610:CDS 40.0%
! CTTTTGTAGCGACACACTAT+TGG - chr8_3:56336632-56336651 Msa1296610:intron 40.0%
TGCATGAACCTACACTGAAA+CGG + chr8_3:56336659-56336678 None:intergenic 40.0%
TTTCAGTGTAGGTTCATGCA+GGG - chr8_3:56336659-56336678 Msa1296610:intron 40.0%
!! TTTACTTTTGTAACAGGGGG+AGG - chr8_3:56336833-56336852 Msa1296610:intron 40.0%
!! GGCTTAATTATGGTTGGTGA+AGG - chr8_3:56336854-56336873 Msa1296610:intron 40.0%
CGAGATTTGGCAATACAGAA+TGG + chr8_3:56337001-56337020 None:intergenic 40.0%
GGCATTGTCTAGCATATTCT+TGG - chr8_3:56337177-56337196 Msa1296610:intron 40.0%
AAATCCCAAAACTGACGGAA+GGG + chr8_3:56337206-56337225 None:intergenic 40.0%
GGAAGAAATCCCAAAACTGA+CGG + chr8_3:56337211-56337230 None:intergenic 40.0%
TGTCATACCGTTATCCACAA+TGG + chr8_3:56337232-56337251 None:intergenic 40.0%
TTACTATTTGTCAGGCTGTC+AGG - chr8_3:56337279-56337298 Msa1296610:intron 40.0%
GAGCTTGAGGATATTTACTG+AGG + chr8_3:56337564-56337583 None:intergenic 40.0%
CAGTAAATATCCTCAAGCTC+TGG - chr8_3:56337564-56337583 Msa1296610:exon 40.0%
ATGCAGGTTCTCTTACATGA+AGG - chr8_3:56337659-56337678 Msa1296610:five_prime_UTR 40.0%
GTGGTTTAAATGAACCATCC+TGG - chr8_3:56337714-56337733 Msa1296610:five_prime_UTR 40.0%
AATCTAGACTCTCCTCTCTT+AGG - chr8_3:56337777-56337796 Msa1296610:five_prime_UTR 40.0%
CTACACACATCACAAATTCG+CGG + chr8_3:56337834-56337853 None:intergenic 40.0%
TCCATTTGAAAGGCAAAACG+GGG + chr8_3:56338013-56338032 None:intergenic 40.0%
! CTTCTCGTGCTGTTATAACA+GGG + chr8_3:56338080-56338099 None:intergenic 40.0%
! ACTTCTCGTGCTGTTATAAC+AGG + chr8_3:56338081-56338100 None:intergenic 40.0%
TGTTATAACAGCACGAGAAG+TGG - chr8_3:56338080-56338099 Msa1296610:five_prime_UTR 40.0%
ATGTGCGAATAGGAAAAGCG+AGG + chr8_3:56328691-56328710 None:intergenic 45.0%
GAAATTGGGGATGTGCGAAT+AGG + chr8_3:56328701-56328720 None:intergenic 45.0%
ATCGATGATGCGAATCTCAC+TGG - chr8_3:56328893-56328912 Msa1296610:intron 45.0%
GTTTCGCCAAAGCTACCAAA+TGG - chr8_3:56328936-56328955 Msa1296610:intron 45.0%
! CGACCAGAATGAACGAGTTT+TGG + chr8_3:56329078-56329097 None:intergenic 45.0%
CTGCCATTGCCATTAACACA+TGG + chr8_3:56329323-56329342 None:intergenic 45.0%
! TTTATGGGGAACGCTTTGGA+AGG - chr8_3:56329357-56329376 Msa1296610:CDS 45.0%
CCTATGTTAGGTTCCACGTT+TGG + chr8_3:56329744-56329763 None:intergenic 45.0%
CCAAACGTGGAACCTAACAT+AGG - chr8_3:56329741-56329760 Msa1296610:intron 45.0%
ATCATGGACGGGAGAGTTAA+TGG - chr8_3:56329852-56329871 Msa1296610:intron 45.0%
TAAACTCTCCCAAGCAGTCT+CGG - chr8_3:56329926-56329945 Msa1296610:intron 45.0%
ATAAGTACCCGAGACTGCTT+GGG + chr8_3:56329937-56329956 None:intergenic 45.0%
TATAAGTACCCGAGACTGCT+TGG + chr8_3:56329938-56329957 None:intergenic 45.0%
TCCTGTCCACGATATAACTG+TGG - chr8_3:56330195-56330214 Msa1296610:intron 45.0%
CCTGTCCACGATATAACTGT+GGG - chr8_3:56330196-56330215 Msa1296610:intron 45.0%
GTGGGATCATATGTCCTTGT+TGG - chr8_3:56330214-56330233 Msa1296610:intron 45.0%
TCATATGTCCTTGTTGGTGC+CGG - chr8_3:56330220-56330239 Msa1296610:intron 45.0%
! CTTCCTTGTGTTGGGTTTTG+AGG - chr8_3:56330322-56330341 Msa1296610:intron 45.0%
TTGCAATCCACAAATGCCAC+GGG + chr8_3:56330429-56330448 None:intergenic 45.0%
GTTGCAATCCACAAATGCCA+CGG + chr8_3:56330430-56330449 None:intergenic 45.0%
! GATTGTGAAGTTTTCCACGG+CGG - chr8_3:56330561-56330580 Msa1296610:intron 45.0%
TACCATTGAGCACTTGACAG+GGG - chr8_3:56330593-56330612 Msa1296610:intron 45.0%
!! ATGTTGGTGGTATGAGGAAG+TGG - chr8_3:56330776-56330795 Msa1296610:intron 45.0%
!! ATCGTTAGTTCTGAGGTTGC+TGG - chr8_3:56331036-56331055 Msa1296610:intron 45.0%
! CTGGTGGTGATTGAGATGAA+TGG - chr8_3:56331055-56331074 Msa1296610:intron 45.0%
GAGATGAATGGAGTTGGAGT+TGG - chr8_3:56331067-56331086 Msa1296610:intron 45.0%
!! AATGGAGTTGGAGTTGGTGT+TGG - chr8_3:56331073-56331092 Msa1296610:intron 45.0%
GGTCAGTGTCATGTGAAACT+TGG + chr8_3:56331184-56331203 None:intergenic 45.0%
ACCTAAACTTCAAAGGTGGC+TGG - chr8_3:56331519-56331538 Msa1296610:intron 45.0%
!! TCCAGCCACCTTTGAAGTTT+AGG + chr8_3:56331523-56331542 None:intergenic 45.0%
CAAAGGTGGCTGGATGAATT+TGG - chr8_3:56331529-56331548 Msa1296610:intron 45.0%
GCGTTACAGCAAAGTTGTTG+TGG - chr8_3:56331555-56331574 Msa1296610:intron 45.0%
TGGCCATTCTTTAGTACACC+AGG - chr8_3:56331622-56331641 Msa1296610:intron 45.0%
GAGGGAAATCTCTGCTTGTA+AGG + chr8_3:56331819-56331838 None:intergenic 45.0%
! GGCACACAAGATAGTATTGG+TGG + chr8_3:56331964-56331983 None:intergenic 45.0%
ACAGCTGGTGCAGTATGAAT+GGG + chr8_3:56332010-56332029 None:intergenic 45.0%
AACAGCTGGTGCAGTATGAA+TGG + chr8_3:56332011-56332030 None:intergenic 45.0%
TTGTTAACAGCCTGAACAGC+TGG + chr8_3:56332025-56332044 None:intergenic 45.0%
ACCCTGCAATTCCTCTCTTA+TGG - chr8_3:56332093-56332112 Msa1296610:CDS 45.0%
GCCATAAGAGAGGAATTGCA+GGG + chr8_3:56332097-56332116 None:intergenic 45.0%
AGCCATAAGAGAGGAATTGC+AGG + chr8_3:56332098-56332117 None:intergenic 45.0%
TATGCAAGGAGCCATAAGAG+AGG + chr8_3:56332107-56332126 None:intergenic 45.0%
CCCTTGCCCAAATCTATACA+AGG + chr8_3:56332187-56332206 None:intergenic 45.0%
TTTGTTGATGCAGCTTGCAG+AGG - chr8_3:56332314-56332333 Msa1296610:intron 45.0%
GGTTCTATCTACAGAGCCTT+AGG - chr8_3:56332335-56332354 Msa1296610:intron 45.0%
ATTGCTGTGGCATATGCCAA+TGG + chr8_3:56332401-56332420 None:intergenic 45.0%
GCACGAATTTCAGAAGATGC+TGG + chr8_3:56332662-56332681 None:intergenic 45.0%
CATGTTTGCATGCAGGTAAG+AGG + chr8_3:56332892-56332911 None:intergenic 45.0%
TGACAGTTACCTCAACTTGC+AGG - chr8_3:56333377-56333396 Msa1296610:intron 45.0%
GACAGTTACCTCAACTTGCA+GGG - chr8_3:56333378-56333397 Msa1296610:intron 45.0%
GTAATATGCCCTGCAAGTTG+AGG + chr8_3:56333389-56333408 None:intergenic 45.0%
CAGGGCATATTACTCAAAGG+TGG - chr8_3:56333396-56333415 Msa1296610:intron 45.0%
ACTCAAAGGTGGACATGTTC+TGG - chr8_3:56333407-56333426 Msa1296610:intron 45.0%
CTAATGCGATGACCGTAAAC+AGG + chr8_3:56333516-56333535 None:intergenic 45.0%
CGGTCATCGCATTAGAAACA+AGG - chr8_3:56333521-56333540 Msa1296610:intron 45.0%
TTGCATTCCCACCTGTGAAA+AGG - chr8_3:56333563-56333582 Msa1296610:intron 45.0%
! AGAGCTTCCTTTTCACAGGT+GGG + chr8_3:56333573-56333592 None:intergenic 45.0%
! AAGAGCTTCCTTTTCACAGG+TGG + chr8_3:56333574-56333593 None:intergenic 45.0%
! AGCAAGAGCTTCCTTTTCAC+AGG + chr8_3:56333577-56333596 None:intergenic 45.0%
!! AAAGGAAGCTCTTGCTGTTG+CGG - chr8_3:56333581-56333600 Msa1296610:intron 45.0%
ATGATACCTTCCAATGGGGT+GGG + chr8_3:56333628-56333647 None:intergenic 45.0%
AATGATACCTTCCAATGGGG+TGG + chr8_3:56333629-56333648 None:intergenic 45.0%
GCTGTGGTTGAACATAGTGA+AGG - chr8_3:56333980-56333999 Msa1296610:intron 45.0%
TTTCAACAGAGACAGAAGGG+AGG + chr8_3:56334012-56334031 None:intergenic 45.0%
TTGTCAAGCACGCAATAGTC+AGG + chr8_3:56334091-56334110 None:intergenic 45.0%
TTGTTATAGTCAGGAGCTGG+AGG - chr8_3:56334409-56334428 Msa1296610:intron 45.0%
! TTAGTGGGATAAGGCTTGGT+TGG - chr8_3:56335092-56335111 Msa1296610:CDS 45.0%
! ATTGTTGTTGTGAACTGGGC+CGG - chr8_3:56335125-56335144 Msa1296610:intron 45.0%
CAGAGATGATGTTCACAACC+AGG + chr8_3:56335436-56335455 None:intergenic 45.0%
ACTGACTAACCACTTGATGC+AGG - chr8_3:56335495-56335514 Msa1296610:intron 45.0%
! AAAGAGAGTTGCAAGTGCTG+TGG - chr8_3:56335636-56335655 Msa1296610:intron 45.0%
! AAGAGAGTTGCAAGTGCTGT+GGG - chr8_3:56335637-56335656 Msa1296610:intron 45.0%
GCAACTTATCTTCAGGCTTC+AGG + chr8_3:56335684-56335703 None:intergenic 45.0%
CATGTCATACCCGGTACTTA+TGG - chr8_3:56335921-56335940 Msa1296610:CDS 45.0%
CTATTGGTCCGTTTCAGTGT+AGG - chr8_3:56336648-56336667 Msa1296610:intron 45.0%
GTTTCAGTGTAGGTTCATGC+AGG - chr8_3:56336658-56336677 Msa1296610:intron 45.0%
AACAGGGGGAGGCTTAATTA+TGG - chr8_3:56336844-56336863 Msa1296610:intron 45.0%
TGAAGTTGTCTGCCGAGATT+TGG + chr8_3:56337014-56337033 None:intergenic 45.0%
GAAATCCCAAAACTGACGGA+AGG + chr8_3:56337207-56337226 None:intergenic 45.0%
! AAATATCCTCAAGCTCTGGC+TGG - chr8_3:56337568-56337587 Msa1296610:five_prime_UTR 45.0%
CAGGTTCTCTTACATGAAGG+CGG - chr8_3:56337662-56337681 Msa1296610:five_prime_UTR 45.0%
GGAGTTGAGACAAACAAGCA+AGG + chr8_3:56337690-56337709 None:intergenic 45.0%
GTTTGTCTCAACTCCATACG+TGG - chr8_3:56337695-56337714 Msa1296610:five_prime_UTR 45.0%
TAAATGAACCATCCTGGTCC+TGG - chr8_3:56337720-56337739 Msa1296610:five_prime_UTR 45.0%
TATATCATGCTTCCAGGACC+AGG + chr8_3:56337735-56337754 None:intergenic 45.0%
AAGGCAAAACGGGGGTTAAA+GGG + chr8_3:56338004-56338023 None:intergenic 45.0%
AAAGGCAAAACGGGGGTTAA+AGG + chr8_3:56338005-56338024 None:intergenic 45.0%
CCATTTGAAAGGCAAAACGG+GGG + chr8_3:56338012-56338031 None:intergenic 45.0%
!!! TTTTCAATATATATTATTTT+AGG - chr8_3:56330987-56331006 Msa1296610:CDS 5.0%
!!! ATTTTTACTAAATAAATAAT+AGG + chr8_3:56335954-56335973 None:intergenic 5.0%
CTTGCTACGGGTCATTACAG+TGG + chr8_3:56328457-56328476 None:intergenic 50.0%
GCTCCCTCAAGAAATTCGCT+AGG + chr8_3:56328967-56328986 None:intergenic 50.0%
CATTCTGGTCGCATTTCCGT+TGG - chr8_3:56329087-56329106 Msa1296610:intron 50.0%
! TGGTCGCATTTCCGTTGGTT+GGG - chr8_3:56329092-56329111 Msa1296610:intron 50.0%
CTTCTGATCGAAGACGTCTC+TGG - chr8_3:56329190-56329209 Msa1296610:intron 50.0%
AAACTCTCCCAAGCAGTCTC+GGG - chr8_3:56329927-56329946 Msa1296610:intron 50.0%
CCCACAGTTATATCGTGGAC+AGG + chr8_3:56330199-56330218 None:intergenic 50.0%
! GCCGGAGAGGTAACAAGTTT+TGG - chr8_3:56330238-56330257 Msa1296610:intron 50.0%
GCTTGGATATGCTAAACCCG+TGG - chr8_3:56330410-56330429 Msa1296610:intron 50.0%
TGCTAAACCCGTGGCATTTG+TGG - chr8_3:56330419-56330438 Msa1296610:intron 50.0%
TTCCCCTGTCAAGTGCTCAA+TGG + chr8_3:56330598-56330617 None:intergenic 50.0%
! AAACCTCTGGAGGCCAAAGT+TGG - chr8_3:56330621-56330640 Msa1296610:intron 50.0%
GTTGGAGATAGAGTTCCTGG+CGG - chr8_3:56330639-56330658 Msa1296610:intron 50.0%
!! GTTAGTTCTGAGGTTGCTGG+TGG - chr8_3:56331039-56331058 Msa1296610:intron 50.0%
!! GGAGTTGGTGTTGGTGTTGT+TGG - chr8_3:56331082-56331101 Msa1296610:intron 50.0%
CAGCTGGTGCAGTATGAATG+GGG + chr8_3:56332009-56332028 None:intergenic 50.0%
TCATACTGCACCAGCTGTTC+AGG - chr8_3:56332012-56332031 Msa1296610:CDS 50.0%
TTCTCTGCTCATCTGCTGTG+AGG - chr8_3:56332059-56332078 Msa1296610:CDS 50.0%
CTCATCTGCTGTGAGGATTG+AGG - chr8_3:56332066-56332085 Msa1296610:CDS 50.0%
AGTAGGCTGCAGGAGTAGAA+AGG + chr8_3:56332140-56332159 None:intergenic 50.0%
! ACAGGGACATTGACTACTGG+TGG - chr8_3:56333468-56333487 Msa1296610:intron 50.0%
ACAGGGCAGTACAACTGTAC+TGG - chr8_3:56334663-56334682 Msa1296610:intron 50.0%
! GCACCTATATTTGTTGGGGC+AGG - chr8_3:56334889-56334908 Msa1296610:intron 50.0%
TGGGAAGAGGGGCAGAAAAA+GGG + chr8_3:56335027-56335046 None:intergenic 50.0%
TTGGGAAGAGGGGCAGAAAA+AGG + chr8_3:56335028-56335047 None:intergenic 50.0%
ATCTGCTAACCCCGCTTAGT+GGG - chr8_3:56335077-56335096 Msa1296610:CDS 50.0%
TAACCCCGCTTAGTGGGATA+AGG - chr8_3:56335083-56335102 Msa1296610:CDS 50.0%
! AAGCCTTATCCCACTAAGCG+GGG + chr8_3:56335089-56335108 None:intergenic 50.0%
! CAAGCCTTATCCCACTAAGC+GGG + chr8_3:56335090-56335109 None:intergenic 50.0%
! CCAAGCCTTATCCCACTAAG+CGG + chr8_3:56335091-56335110 None:intergenic 50.0%
GGCCTCTTAATCTGTTAGGC+CGG + chr8_3:56335147-56335166 None:intergenic 50.0%
ATGATGTTCACAACCAGGGC+CGG + chr8_3:56335431-56335450 None:intergenic 50.0%
GTTAGTCAGTAAGGCCCAGA+AGG + chr8_3:56335485-56335504 None:intergenic 50.0%
TCAACGTGACCTGCATCAAG+TGG + chr8_3:56335507-56335526 None:intergenic 50.0%
!! CGTTGATTCACCTGGAGGAT+AGG - chr8_3:56335521-56335540 Msa1296610:intron 50.0%
ACATCAAAAACCCCTGGACG+AGG + chr8_3:56335547-56335566 None:intergenic 50.0%
! TGCAACTGCGCTACACCTTT+TGG - chr8_3:56336594-56336613 Msa1296610:intron 50.0%
GGGGGAGGCTTAATTATGGT+TGG - chr8_3:56336848-56336867 Msa1296610:intron 50.0%
! CACTTGCTGCTGCAACTGTT+GGG - chr8_3:56336894-56336913 Msa1296610:intron 50.0%
ATCTCGGCAGACAACTTCAC+TGG - chr8_3:56337015-56337034 Msa1296610:intron 50.0%
!! TGGCTCTGGCATACATCTGT+TGG - chr8_3:56337076-56337095 Msa1296610:intron 50.0%
! GGCTCTGGCATACATCTGTT+GGG - chr8_3:56337077-56337096 Msa1296610:intron 50.0%
! GCTTCCCTTCCGTCAGTTTT+GGG - chr8_3:56337199-56337218 Msa1296610:intron 50.0%
! CCCCCGTTTTGCCTTTCAAA+TGG - chr8_3:56338009-56338028 Msa1296610:five_prime_UTR 50.0%
CTGGTCGCATTTCCGTTGGT+TGG - chr8_3:56329091-56329110 Msa1296610:intron 55.0%
! GGTCGCATTTCCGTTGGTTG+GGG - chr8_3:56329093-56329112 Msa1296610:intron 55.0%
!! ATGGGGAACGCTTTGGAAGG+AGG - chr8_3:56329360-56329379 Msa1296610:CDS 55.0%
!! TGGGGAACGCTTTGGAAGGA+GGG - chr8_3:56329361-56329380 Msa1296610:CDS 55.0%
TATCGTGGACAGGAACCCTC+TGG + chr8_3:56330189-56330208 None:intergenic 55.0%
TTACCTCTCCGGCACCAACA+AGG + chr8_3:56330231-56330250 None:intergenic 55.0%
GACAGGGGAAGTCAAACCTC+TGG - chr8_3:56330608-56330627 Msa1296610:intron 55.0%
AGGGGAAGTCAAACCTCTGG+AGG - chr8_3:56330611-56330630 Msa1296610:intron 55.0%
TCTCCAACTTTGGCCTCCAG+AGG + chr8_3:56330627-56330646 None:intergenic 55.0%
ATAGAGTTCCTGGCGGTGCA+AGG - chr8_3:56330646-56330665 Msa1296610:intron 55.0%
TCTATGTTCCTTGCACCGCC+AGG + chr8_3:56330657-56330676 None:intergenic 55.0%
GGCGGTGCAAGGAACATAGA+TGG - chr8_3:56330657-56330676 Msa1296610:intron 55.0%
GCTATGCTCAAGTAGGCTGC+AGG + chr8_3:56332150-56332169 None:intergenic 55.0%
CTACAGAGCCTTAGGGCTCA+TGG - chr8_3:56332343-56332362 Msa1296610:intron 55.0%
TGCTGCAACCATGAGCCCTA+AGG + chr8_3:56332354-56332373 None:intergenic 55.0%
TGCAGCATCACCATGTGCCT+TGG - chr8_3:56332367-56332386 Msa1296610:intron 55.0%
ATCACCATGTGCCTTGGCTG+TGG - chr8_3:56332373-56332392 Msa1296610:intron 55.0%
TGCACAGGAGCTGATTGCTG+TGG + chr8_3:56332414-56332433 None:intergenic 55.0%
TGTTGCGGCAGCCATGGAAA+AGG - chr8_3:56333596-56333615 Msa1296610:intron 55.0%
GTTGCGGCAGCCATGGAAAA+GGG - chr8_3:56333597-56333616 Msa1296610:intron 55.0%
! GTGGGTAGTGCCCTTTTCCA+TGG + chr8_3:56333610-56333629 None:intergenic 55.0%
GTAGCAGTAAGGCCTCTACC+AGG + chr8_3:56334049-56334068 None:intergenic 55.0%
GATCTGCTAACCCCGCTTAG+TGG - chr8_3:56335076-56335095 Msa1296610:CDS 55.0%
CCGCTTAGTGGGATAAGGCT+TGG - chr8_3:56335088-56335107 Msa1296610:CDS 55.0%
GGCCGGCCTAACAGATTAAG+AGG - chr8_3:56335142-56335161 Msa1296610:intron 55.0%
TGCGACCTAAAGCCCTTGCT+TGG - chr8_3:56335388-56335407 Msa1296610:intron 55.0%
GCGACCTAAAGCCCTTGCTT+GGG - chr8_3:56335389-56335408 Msa1296610:intron 55.0%
GCAACCCAAGCAAGGGCTTT+AGG + chr8_3:56335396-56335415 None:intergenic 55.0%
!! GCAGGTCACGTTGATTCACC+TGG - chr8_3:56335513-56335532 Msa1296610:intron 55.0%
!! GGTCACGTTGATTCACCTGG+AGG - chr8_3:56335516-56335535 Msa1296610:intron 55.0%
ACAGTTGCAGCAGCAAGTGC+TGG + chr8_3:56336893-56336912 None:intergenic 55.0%
! GCACTTGCTGCTGCAACTGT+TGG - chr8_3:56336893-56336912 Msa1296610:intron 55.0%
! GGCTTCCCTTCCGTCAGTTT+TGG - chr8_3:56337198-56337217 Msa1296610:intron 55.0%
AAGCAACCAGCCAGAGCTTG+AGG + chr8_3:56337577-56337596 None:intergenic 55.0%
TCATGCTTCCAGGACCAGGA+TGG + chr8_3:56337731-56337750 None:intergenic 55.0%
!! TGTCCTTGTTGGTGCCGGAG+AGG - chr8_3:56330225-56330244 Msa1296610:intron 60.0%
TGGTAATTGTGGCACCGCCG+TGG + chr8_3:56330578-56330597 None:intergenic 60.0%
TGCCTTGGCTGTGGCTCCAT+TGG - chr8_3:56332382-56332401 Msa1296610:intron 60.0%
TGCCAATGGAGCCACAGCCA+AGG + chr8_3:56332387-56332406 None:intergenic 60.0%
!! TCTTGCTGTTGCGGCAGCCA+TGG - chr8_3:56333590-56333609 Msa1296610:intron 60.0%
!! AAGGGCACTACCCACCCCAT+TGG - chr8_3:56333615-56333634 Msa1296610:intron 60.0%
GCACTACCCACCCCATTGGA+AGG - chr8_3:56333619-56333638 Msa1296610:intron 60.0%
! AAGCCCTTGCTTGGGTTGCC+TGG - chr8_3:56335397-56335416 Msa1296610:intron 60.0%
CACAACCAGGGCCGGTCTAA+GGG + chr8_3:56335423-56335442 None:intergenic 60.0%
TCACAACCAGGGCCGGTCTA+AGG + chr8_3:56335424-56335443 None:intergenic 60.0%
TGGAGGATAGGCCTCGTCCA+GGG - chr8_3:56335533-56335552 Msa1296610:intron 60.0%
GGAGCCACAGCCAAGGCACA+TGG + chr8_3:56332380-56332399 None:intergenic 65.0%
GGGCCAGGCAACCCAAGCAA+GGG + chr8_3:56335403-56335422 None:intergenic 65.0%
AGGGCCAGGCAACCCAAGCA+AGG + chr8_3:56335404-56335423 None:intergenic 65.0%
GGGTTGCCTGGCCCTTAGAC+CGG - chr8_3:56335409-56335428 Msa1296610:intron 65.0%
CTGGACGAGGCCTATCCTCC+AGG + chr8_3:56335534-56335553 None:intergenic 65.0%
CTGGAGGATAGGCCTCGTCC+AGG - chr8_3:56335532-56335551 Msa1296610:intron 65.0%
GGAGGATAGGCCTCGTCCAG+GGG - chr8_3:56335534-56335553 Msa1296610:intron 65.0%
CCAGGGCCGGTCTAAGGGCC+AGG + chr8_3:56335418-56335437 None:intergenic 75.0%
CCTGGCCCTTAGACCGGCCC+TGG - chr8_3:56335415-56335434 Msa1296610:intron 75.0%
Chromosome Type Strat End Strand Name
chr8_3 gene 56328452 56338109 56328452 ID=Msa1296610;Name=Msa1296610
chr8_3 mRNA 56328452 56338109 56328452 ID=Msa1296610-mRNA-1;Parent=Msa1296610;Name=Msa1296610-mRNA-1;_AED=0.17;_eAED=0.17;_QI=545|0.81|0.91|1|0.90|0.91|12|265|637
chr8_3 exon 56328452 56328896 56328452 ID=Msa1296610-mRNA-1:exon:16134;Parent=Msa1296610-mRNA-1
chr8_3 exon 56329318 56329404 56329318 ID=Msa1296610-mRNA-1:exon:16133;Parent=Msa1296610-mRNA-1
chr8_3 exon 56329525 56329712 56329525 ID=Msa1296610-mRNA-1:exon:16132;Parent=Msa1296610-mRNA-1
chr8_3 exon 56330828 56331044 56330828 ID=Msa1296610-mRNA-1:exon:16131;Parent=Msa1296610-mRNA-1
chr8_3 exon 56332009 56332143 56332009 ID=Msa1296610-mRNA-1:exon:16130;Parent=Msa1296610-mRNA-1
chr8_3 exon 56332477 56332582 56332477 ID=Msa1296610-mRNA-1:exon:16129;Parent=Msa1296610-mRNA-1
chr8_3 exon 56332921 56333162 56332921 ID=Msa1296610-mRNA-1:exon:16128;Parent=Msa1296610-mRNA-1
chr8_3 exon 56334122 56334234 56334122 ID=Msa1296610-mRNA-1:exon:16127;Parent=Msa1296610-mRNA-1
chr8_3 exon 56334918 56335113 56334918 ID=Msa1296610-mRNA-1:exon:16126;Parent=Msa1296610-mRNA-1
chr8_3 exon 56335866 56336012 56335866 ID=Msa1296610-mRNA-1:exon:16125;Parent=Msa1296610-mRNA-1
chr8_3 exon 56336315 56336499 56336315 ID=Msa1296610-mRNA-1:exon:16124;Parent=Msa1296610-mRNA-1
chr8_3 exon 56337447 56338109 56337447 ID=Msa1296610-mRNA-1:exon:16123;Parent=Msa1296610-mRNA-1
chr8_3 five_prime_UTR 56337565 56338109 56337565 ID=Msa1296610-mRNA-1:five_prime_utr;Parent=Msa1296610-mRNA-1
chr8_3 CDS 56337447 56337564 56337447 ID=Msa1296610-mRNA-1:cds;Parent=Msa1296610-mRNA-1
chr8_3 CDS 56336315 56336499 56336315 ID=Msa1296610-mRNA-1:cds;Parent=Msa1296610-mRNA-1
chr8_3 CDS 56335866 56336012 56335866 ID=Msa1296610-mRNA-1:cds;Parent=Msa1296610-mRNA-1
chr8_3 CDS 56334918 56335113 56334918 ID=Msa1296610-mRNA-1:cds;Parent=Msa1296610-mRNA-1
chr8_3 CDS 56334122 56334234 56334122 ID=Msa1296610-mRNA-1:cds;Parent=Msa1296610-mRNA-1
chr8_3 CDS 56332921 56333162 56332921 ID=Msa1296610-mRNA-1:cds;Parent=Msa1296610-mRNA-1
chr8_3 CDS 56332477 56332582 56332477 ID=Msa1296610-mRNA-1:cds;Parent=Msa1296610-mRNA-1
chr8_3 CDS 56332009 56332143 56332009 ID=Msa1296610-mRNA-1:cds;Parent=Msa1296610-mRNA-1
chr8_3 CDS 56330828 56331044 56330828 ID=Msa1296610-mRNA-1:cds;Parent=Msa1296610-mRNA-1
chr8_3 CDS 56329525 56329712 56329525 ID=Msa1296610-mRNA-1:cds;Parent=Msa1296610-mRNA-1
chr8_3 CDS 56329318 56329404 56329318 ID=Msa1296610-mRNA-1:cds;Parent=Msa1296610-mRNA-1
chr8_3 CDS 56328717 56328896 56328717 ID=Msa1296610-mRNA-1:cds;Parent=Msa1296610-mRNA-1
chr8_3 three_prime_UTR 56328452 56328716 56328452 ID=Msa1296610-mRNA-1:three_prime_utr;Parent=Msa1296610-mRNA-1
Gene Sequence

>Msa1296610

ATGTTGCGTATCAACTGCTTTGTTTGTAGCTGCAGCTATTTGTCCTCATACTTTGCCCAAATCACTCATCAAACCTGTCCAAAACTCGTTCATTCTGGTCGCATTTCCGTTGGTTGGGCTGAAGAGTATTTCACAAGTCGTTCAATGGTTGATGTTAAAGAGTTGAAGGAGAACAATCCAGAATTTGCACTTGTTCTTGATACAAAAGATAATAAACTTCCTAATACATTTGATTTCAAATACCAGAGGGTTCCTGTCCACGATATAACTGTGGGATCATATGTCCTTGTTGGTGCCGGAGAGTCTGTGCCTGTAGATTGTGAAGTTTTCCACGGCGGTGCCACAATTACCATTGAGCACTTGACAGGGGAAGTCAAACCTCTGGAGGCCAAAGTTGGAGATAGAGTTCCTGGCGGTGCAAGGAACATAGATGGTAGAATAATTGTGAAGGTAACAAAGACATGGAAGGAATCAACTCTAAGCAAAATTGTGCAGTTGACTGAAGAAGCTCAGTTGAATAGACCTAAACTTCAAAGGTGGCTGGATGAATTTGGTGAGCGTTACAGCAAAGTTGTTGTGGTGTTATCAATTGCTATTGCTGTTCTTGGTCCACTTGTATTTAAGTGGCCATTCTTTAGTACACCAGCTTGCAGAGGTTCTATCTACAGAGCCTTAGGGCTCATGGTTGCAGCATCACCATGTGCCTTGGCTGTGGCTCCATTGGCATATGCCACAGCAATCAGCTCCTGTGCAAAAAAGGGCATATTACTCAAAGGTGGACATGTTCTGGATGCACTAGCTTCATGCCATACCATTGCATTTGATAAAACAGGGACATTGACTACTGGTGGACTTGTATTCAAGGCAATTGAGCCTGTTTACGGTCATCGCATTAGAAACAAGGAATCAAACATATCTTCTTGTTGCATTCCCACCTGTGAAAAGGAAGCTCTTGCTGTTGCGGCAGCCATGGAAAAGGGCACTACCCACCCCATTGGAAGGGCTGTGGTTGAACATAGTGAAGGGAAAGACCTCCCTTCTGTCTCTGTTGAAAATTTTGAGTACTTTCCTGGTAGAGGCCTTACTGCTACTGTTAACAGCATTGAGTCAGGAGCTGGAGGTGCTAACCTATTGAAAGCATCACTTGGGTCTATAGATTTCATCACTTCATTTTGTCAATCTGAAGATGAATCAAAAAAGGTCAAGGAAGCTATTAATGCATCTTCTTATGGCAGTGAATTTGTCACGTTGATTCACCTGGAGGATAGGCCTCGTCCAGGGGTTTTTGATGTTATTCAAGAATTGCAAGATGAAGCAAAGTTCCGTGTGATGATGTTAACTGGTGATCATGAATATAGTGCAAAGAGAGTTGCAAGTGCTGTGGGTATCAGAGAGTTTCATTGCAACCTGAAGCCTGAAGATAAGTTGCGTCATGTAAAGGATATCTCAAGAGATATGGGGGGAGGCTTAATTATGGTTGGTGAAGGTATTAATGATGCTCCAGCACTTGCTGCTGCAACTGTTGGGATTGTGCTTGCTCATCGTGCTAGTGCAACTGCTATAGCTGTTGCAGATGTGCTGTTGCTTCGTGAAAATATTTCTGCAGTGCCATTCTGTATTGCCAAATCTCGGCAGACAACTTCACTGATTAAGCAAAATGTAGCTCTGGCATTGTCTAGCATATTCTTGGCTTCCCTTCCGTCAGTTTTGGGATTTCTTCCATTGTGGATAACGGTTCTCTTACATGAAGGCGGAACCTTGCTTGTTTGTCTCAACTCCATACGTGGTTTAAATGAACCATCCTGGTCCTGGAAGCATGATATATTACAGTTGATTGGCAAGGTTAAATCTAGACTCTCCTCTCTTAGGACAAATATAACAGGCTCAAGTAGCATTACAACCGCGAATTTGTGA
Protein sequence

>Msa1296610

MLRINCFVCSCSYLSSYFAQITHQTCPKLVHSGRISVGWAEEYFTSRSMVDVKELKENNPEFALVLDTKDNKLPNTFDFKYQRVPVHDITVGSYVLVGAGESVPVDCEVFHGGATITIEHLTGEVKPLEAKVGDRVPGGARNIDGRIIVKVTKTWKESTLSKIVQLTEEAQLNRPKLQRWLDEFGERYSKVVVVLSIAIAVLGPLVFKWPFFSTPACRGSIYRALGLMVAASPCALAVAPLAYATAISSCAKKGILLKGGHVLDALASCHTIAFDKTGTLTTGGLVFKAIEPVYGHRIRNKESNISSCCIPTCEKEALAVAAAMEKGTTHPIGRAVVEHSEGKDLPSVSVENFEYFPGRGLTATVNSIESGAGGANLLKASLGSIDFITSFCQSEDESKKVKEAINASSYGSEFVTLIHLEDRPRPGVFDVIQELQDEAKFRVMMLTGDHEYSAKRVASAVGIREFHCNLKPEDKLRHVKDISRDMGGGLIMVGEGINDAPALAAATVGIVLAHRASATAIAVADVLLLRENISAVPFCIAKSRQTTSLIKQNVALALSSIFLASLPSVLGFLPLWITVLLHEGGTLLVCLNSIRGLNEPSWSWKHDILQLIGKVKSRLSSLRTNITGSSSITTANL*