AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0143360

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0143360 MtrunA17_Chr7g0265941 99.544 877 4 0 1 877 1 877 0.0 1821
Msa0143360 MtrunA17_Chr3g0143901 56.084 715 287 7 173 872 91 793 0.0 812
Msa0143360 MtrunA17_Chr3g0099611 41.552 580 315 11 275 849 339 899 2.32e-147 457
Msa0143360 MtrunA17_Chr8g0389131 26.840 231 131 10 306 504 196 420 1.02e-11 68.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0143360 AT2G36390.1 75.089 847 190 8 1 843 1 830 0.0 1309
Msa0143360 AT5G03650.1 73.113 848 181 5 4 851 3 803 0.0 1302
Msa0143360 AT3G20440.2 40.995 583 315 10 275 850 334 894 8.62e-147 456
Msa0143360 AT3G20440.3 41.561 551 285 11 275 811 334 861 1.57e-142 445
Msa0143360 AT3G20440.1 38.937 583 297 12 275 850 334 864 1.17e-128 408

Find 254 sgRNAs with CRISPR-Local

Find 1334 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGAAATTACAATGAGTATTT+TGG 0.165319 1_4:+2284351 Msa0143360:CDS
TTACACCATATCTTTCTTCT+AGG 0.172344 1_4:-2289825 None:intergenic
AAGATGGTTTATACCATTTC+AGG 0.180012 1_4:+2272377 Msa0143360:exon
CTATAATGCTGTTCAGATTA+TGG 0.201856 1_4:+2281990 Msa0143360:CDS
GGTGAACCATCGGCATTATT+TGG 0.214940 1_4:-2278089 None:intergenic
AACTAGCGCTCCACACATTT+TGG 0.230336 1_4:-2291583 None:intergenic
CCCAGCTTCCATAGTTAAAA+AGG 0.234454 1_4:-2283112 None:intergenic
GATGCTCATTATTTCCATTC+TGG 0.235407 1_4:+2283056 Msa0143360:CDS
AATGATTAGGCTTATTACTA+TGG 0.236875 1_4:+2286629 Msa0143360:CDS
CAGAGTTAAAAGTTGAATTA+TGG 0.244273 1_4:+2291890 Msa0143360:three_prime_UTR
TCATAGTATATTCCATTATA+TGG 0.261699 1_4:-2280054 None:intergenic
CCTTGTTTGGTGGCTTCAAT+AGG 0.279250 1_4:+2290794 Msa0143360:CDS
ATCAGAGACTTAAGATCTTC+TGG 0.279681 1_4:-2282289 None:intergenic
GTGACAAGACACTAGCATTT+TGG 0.284597 1_4:+2286138 Msa0143360:CDS
CGGTGAAGAATGGCGTTATC+TGG 0.287370 1_4:-2272137 None:intergenic
GTACTTATTCTCATCTTTCA+TGG 0.297616 1_4:-2274535 None:intergenic
AATAGTTGCCTTAGTCTAAA+TGG 0.300096 1_4:+2291952 Msa0143360:three_prime_UTR
TTCTTCTATTCTACCAGCTT+AGG 0.303350 1_4:-2272356 None:intergenic
TTCAGCAATTGTGGAAGATT+TGG 0.304204 1_4:-2273515 None:intergenic
CCTGGTGAAATTCCATATAA+TGG 0.310956 1_4:+2280042 Msa0143360:CDS
CTAGTTAACTTAATCTTTAG+TGG 0.317405 1_4:+2291600 Msa0143360:three_prime_UTR
GCTGAGTTATCTTGATCTTC+AGG 0.317933 1_4:-2273556 None:intergenic
ACCGTCAGCATCTTGATTTC+CGG 0.322459 1_4:+2274769 Msa0143360:CDS
TCAGGATATGTATGACTTCA+TGG 0.326355 1_4:+2286554 Msa0143360:intron
TAGCATGGTGATTGGGGTTG+TGG 0.337038 1_4:-2272064 None:intergenic
TGAATGAACCGATGTCTTCT+TGG 0.339883 1_4:-2274655 None:intergenic
TTGCATTACACAAAATGATT+AGG 0.342355 1_4:+2286616 Msa0143360:CDS
CATTCTTACTATGCTAGCTT+TGG 0.344065 1_4:+2282024 Msa0143360:CDS
GAACGGAGATATCATATATA+AGG 0.344110 1_4:-2291868 None:intergenic
CGGGTCATTACATCTGCATT+TGG 0.344917 1_4:-2277620 None:intergenic
TAGCATAGTAAGAATGTTCT+TGG 0.349990 1_4:-2282017 None:intergenic
CTTGTTAATGATCTCATTCA+TGG 0.351448 1_4:+2284411 Msa0143360:CDS
CAGTACATCATCTCTAAAAT+TGG 0.355844 1_4:-2281947 None:intergenic
TCTTCTATTCTACCAGCTTA+GGG 0.358826 1_4:-2272355 None:intergenic
CTGAGCACCAATATATTTCA+AGG 0.360464 1_4:+2290196 Msa0143360:CDS
AGCATGGTGATTGGGGTTGT+GGG 0.362748 1_4:-2272063 None:intergenic
CAAAGCGACCACAATCAATT+AGG 0.364951 1_4:+2281389 Msa0143360:CDS
CCTAATGGCACAGTAGTTCC+TGG 0.368606 1_4:+2286878 Msa0143360:CDS
ACCAACTTATGGTGATTAAC+AGG 0.370801 1_4:+2291534 Msa0143360:three_prime_UTR
ATGTAGAATCTTACCTCCTC+TGG 0.373395 1_4:-2280081 None:intergenic
TTGAGTTTAGCATGGTGATT+GGG 0.374951 1_4:-2272071 None:intergenic
TTAATTTAATTTAATGATGA+TGG 0.375207 1_4:-2272184 None:intergenic
TTTGATGGGTTTCGATTTGA+TGG 0.375568 1_4:+2283291 Msa0143360:CDS
ATTGAAATTATGCACTCAAC+TGG 0.380999 1_4:-2292120 None:intergenic
GATTCAGATGAGTCCTTGTT+TGG 0.381742 1_4:+2290781 Msa0143360:CDS
TCACCAATTGAAACAGCTTC+AGG 0.383630 1_4:-2284441 None:intergenic
GTGGTATATGCTCTTGTAGA+TGG 0.387375 1_4:+2291367 Msa0143360:CDS
GCATCCTCTGAGGTTATATC+AGG 0.388161 1_4:-2273604 None:intergenic
ATTCTTACTATGCTAGCTTT+GGG 0.389172 1_4:+2282025 Msa0143360:CDS
AAAACTAGCCAACCAACTTA+TGG 0.392162 1_4:+2291523 Msa0143360:three_prime_UTR
CTGGTTCACGGGGTTATCAT+TGG 0.394632 1_4:+2283075 Msa0143360:CDS
CTTATCAAAGAATTGTCATC+AGG 0.395661 1_4:-2291464 None:intergenic
TCTCGTGGGTACGAAAAGTT+AGG 0.402091 1_4:+2275782 Msa0143360:CDS
TTTAAAGCCAGGGAAATATA+AGG 0.403419 1_4:+2290320 Msa0143360:CDS
CCAGGAACTACTGTGCCATT+AGG 0.406479 1_4:-2286878 None:intergenic
CTAATTGATTGTGGTCGCTT+TGG 0.408568 1_4:-2281388 None:intergenic
TTTGTCAAACAGGACGATTT+TGG 0.409368 1_4:+2278047 Msa0143360:intron
CTGGATGAATATAAGTTTGA+TGG 0.409642 1_4:+2283276 Msa0143360:CDS
GATGGCCTCAACATGTTTGA+TGG 0.411413 1_4:+2283029 Msa0143360:CDS
AGGCTTATTACTATGGGCCT+TGG 0.413792 1_4:+2286636 Msa0143360:CDS
CTTATTACTATGGGCCTTGG+TGG 0.414842 1_4:+2286639 Msa0143360:CDS
ATTATTTCCATTCTGGTTCA+CGG 0.416405 1_4:+2283063 Msa0143360:CDS
GCAATTCCACGATCAATTAG+AGG 0.417101 1_4:-2286597 None:intergenic
CTTTAACTATCGCTTGCATA+TGG 0.419803 1_4:+2284708 Msa0143360:CDS
TGGTATATGCTCTTGTAGAT+GGG 0.420419 1_4:+2291368 Msa0143360:CDS
GAACAAGCAGGCCTAGTTCA+TGG 0.420940 1_4:-2282321 None:intergenic
GCGATCGCCACCGCGTAAGC+TGG 0.422382 1_4:-2272435 None:intergenic
TTTGCACCTAGCAGTCGGTT+TGG 0.424879 1_4:+2282262 Msa0143360:CDS
ACTCGAGAACCATGAGGAAT+TGG 0.425220 1_4:-2278113 None:intergenic
GTTGAGTTTAGCATGGTGAT+TGG 0.427181 1_4:-2272072 None:intergenic
TTATTTCCATTCTGGTTCAC+GGG 0.429238 1_4:+2283064 Msa0143360:CDS
GTCATTCCTCCACCTGGTGC+TGG 0.430388 1_4:+2274708 Msa0143360:CDS
CACGGGGTTATCATTGGATG+TGG 0.435086 1_4:+2283081 Msa0143360:CDS
CTTCAGTCAGCAGCATTAGT+TGG 0.435570 1_4:+2277578 Msa0143360:intron
TATCCTGAAGCTGTTTCAAT+TGG 0.436877 1_4:+2284438 Msa0143360:CDS
AGTTATTCAGATTACAAAGT+TGG 0.437881 1_4:+2290294 Msa0143360:CDS
CCGACTCAAGATGGTGGGAT+TGG 0.441378 1_4:+2284685 Msa0143360:CDS
ACTCCAACTGACAGTTCAAC+TGG 0.448423 1_4:-2291403 None:intergenic
GATAGTACCTTATATTTCCC+TGG 0.449188 1_4:-2290327 None:intergenic
AAAGATGAAGATTGGAGAAT+GGG 0.453670 1_4:+2286032 Msa0143360:CDS
GGGAAATCGAATTCCTGAAA+TGG 0.453991 1_4:-2272390 None:intergenic
AAAAGATGAAGATTGGAGAA+TGG 0.456123 1_4:+2286031 Msa0143360:CDS
GCTGCTACACCCGTGGCAAA+TGG 0.457262 1_4:-2291986 None:intergenic
TCAGATGAGTCCTTGTTTGG+TGG 0.461022 1_4:+2290784 Msa0143360:CDS
ACTTACAGAGAGTGGGCACC+TGG 0.461529 1_4:+2276637 Msa0143360:CDS
GATTAATGTACGGTGAAGAA+TGG 0.462546 1_4:-2272147 None:intergenic
CCAGGTGGAGGAATGACCTT+AGG 0.466670 1_4:-2274702 None:intergenic
TAGTTGGAGATTTCAACAAT+TGG 0.467509 1_4:+2277594 Msa0143360:CDS
GCAGAATATCTAAGATATCA+TGG 0.471184 1_4:+2289772 Msa0143360:CDS
AGGTTCCACCATTTAGACTA+AGG 0.472341 1_4:-2291960 None:intergenic
AAAGTTGGCTGTTTAAAGCC+AGG 0.472552 1_4:+2290309 Msa0143360:CDS
ATCTACTTTCAAATGCTAGA+TGG 0.477360 1_4:+2283250 Msa0143360:CDS
CTAGCAGTTATAGAGAGGTC+GGG 0.479938 1_4:+2274574 Msa0143360:CDS
ACTAGGCCTGCTTGTTCTGA+TGG 0.481771 1_4:+2282327 Msa0143360:CDS
TGAGATCATTAACAAGCATC+AGG 0.484455 1_4:-2284404 None:intergenic
GGAATTCTTCTTGAGAAAGA+AGG 0.485126 1_4:-2272477 None:intergenic
TTATTCAGAGAAGGAACAAC+GGG 0.485583 1_4:-2272410 None:intergenic
GCCTTCCGACTCAAGATGGT+GGG 0.485888 1_4:+2284680 Msa0143360:CDS
TTTATCAGATTCAGCAATTG+TGG 0.486060 1_4:-2273524 None:intergenic
GGTGATCAACATCTTCCTAA+TGG 0.486819 1_4:+2286863 Msa0143360:CDS
TTCAAATGCTAGATGGTGGC+TGG 0.489564 1_4:+2283257 Msa0143360:CDS
CAGCACCTAGAAGAAAGATA+TGG 0.490578 1_4:+2289820 Msa0143360:CDS
TAAGTATAAGAAATGCATAA+TGG 0.491023 1_4:+2291483 Msa0143360:three_prime_UTR
CCATTATATGGAATTTCACC+AGG 0.491574 1_4:-2280042 None:intergenic
AAGAAGCTCAATCCACTTGT+CGG 0.491862 1_4:-2284737 None:intergenic
TCATAACTGTTGTTATTCCC+AGG 0.493886 1_4:-2286896 None:intergenic
GGGAATGAATTCGGCCATCC+TGG 0.496950 1_4:+2286684 Msa0143360:CDS
GGATACACCCTCTGGAATCA+AGG 0.501845 1_4:+2279981 Msa0143360:CDS
AAATTCTCTGTACAGGCTCC+TGG 0.502783 1_4:+2280024 Msa0143360:CDS
GCTAGCAGTTATAGAGAGGT+CGG 0.503250 1_4:+2274573 Msa0143360:CDS
GCCTGTTAATCACCATAAGT+TGG 0.503330 1_4:-2291535 None:intergenic
TTGGATCAAATTCTCTGTAC+AGG 0.503440 1_4:+2280017 Msa0143360:CDS
GAACCTTTGCCATTTGCCAC+GGG 0.503464 1_4:+2291977 Msa0143360:three_prime_UTR
CGATCAATTAGAGGAGTAGA+TGG 0.505276 1_4:-2286588 None:intergenic
TTCTGTCCAGCACCAGGTGG+AGG 0.505465 1_4:-2274714 None:intergenic
CATACACATGCACAAACACT+TGG 0.507427 1_4:-2291639 None:intergenic
ACCTTCTGTTTGTCAGTGTG+TGG 0.509339 1_4:-2286064 None:intergenic
ATCCACATGGATACACCCTC+TGG 0.509855 1_4:+2279973 Msa0143360:CDS
ATGATTAGGCTTATTACTAT+GGG 0.511464 1_4:+2286630 Msa0143360:CDS
ACTATGGGCCTTGGTGGTGA+AGG 0.511581 1_4:+2286645 Msa0143360:CDS
TTGGGGTTGTGGGACCCACT+TGG 0.514707 1_4:-2272053 None:intergenic
TTTGTAATCTGAATAACTGT+TGG 0.514908 1_4:-2290289 None:intergenic
ATAGACAGAGCCCATGAACT+AGG 0.517222 1_4:+2282310 Msa0143360:CDS
GTGCATGTGTATGCCTTGCT+AGG 0.517444 1_4:+2291649 Msa0143360:three_prime_UTR
TTCTGCCTTCCGACTCAAGA+TGG 0.518328 1_4:+2284676 Msa0143360:CDS
GATTGTGGTCGCTTTGGCTG+TGG 0.519324 1_4:-2281382 None:intergenic
TATAAGAGTTGAGTTTAGCA+TGG 0.523621 1_4:-2272079 None:intergenic
ACACGTTGGGATGAGTAGCC+CGG 0.524280 1_4:+2281423 Msa0143360:CDS
TGTTATGTCATCATCACTTG+TGG 0.524338 1_4:+2274611 Msa0143360:CDS
TGCAACTGATGTTGAAGCTG+TGG 0.525040 1_4:+2284377 Msa0143360:CDS
CCTATTGAAGCCACCAAACA+AGG 0.527558 1_4:-2290794 None:intergenic
CTCAATCCACTTGTCGGCAA+CGG 0.530775 1_4:-2284731 None:intergenic
GGTGAAGAATGGCGTTATCT+GGG 0.532727 1_4:-2272136 None:intergenic
GATAACCCCGTGAACCAGAA+TGG 0.532732 1_4:-2283070 None:intergenic
CGAGAACCATGAGGAATTGG+TGG 0.532760 1_4:-2278110 None:intergenic
TGTAGAATCTTACCTCCTCT+GGG 0.533060 1_4:-2280080 None:intergenic
TCAAGGACTCAATTCCTGCT+TGG 0.533123 1_4:+2279998 Msa0143360:CDS
ACAATCAATTAGGATATATG+AGG 0.533206 1_4:+2281399 Msa0143360:CDS
ATGAAGTATACCTTAGCTCC+AGG 0.534297 1_4:-2276655 None:intergenic
GCATCAAGTAATACATTGGA+TGG 0.536550 1_4:+2283011 Msa0143360:CDS
GTTAATCACCATAAGTTGGT+TGG 0.538842 1_4:-2291531 None:intergenic
AGAGTGGGCACCTGGAGCTA+AGG 0.539033 1_4:+2276645 Msa0143360:CDS
ACAATATATAAACCCTAAGC+TGG 0.539539 1_4:+2272343 Msa0143360:five_prime_UTR
AACAAGCAGGCCTAGTTCAT+GGG 0.540275 1_4:-2282320 None:intergenic
AAAATGATTTGATTAATGTA+CGG 0.540853 1_4:-2272157 None:intergenic
ACAACAGTTATGATAAATGC+AGG 0.541101 1_4:+2286906 Msa0143360:CDS
CATTATTATGTGCACAGAAA+CGG 0.541964 1_4:-2291792 None:intergenic
TGAGTTTAGCATGGTGATTG+GGG 0.542424 1_4:-2272070 None:intergenic
TCTTTCCATTTCCAGGTGAG+TGG 0.543255 1_4:+2284643 Msa0143360:intron
TCAATGATGTACACTCATCA+TGG 0.545161 1_4:+2283321 Msa0143360:CDS
GGAGTTCCAAACCGACTGCT+AGG 0.546887 1_4:-2282268 None:intergenic
TCCTCATGGTTCTCGAGTCA+AGG 0.547486 1_4:+2278118 Msa0143360:CDS
GGATATATGAGGCACACGTT+GGG 0.549787 1_4:+2281410 Msa0143360:CDS
AATCTTCGAAAGGGACAACC+TGG 0.550488 1_4:+2290242 Msa0143360:CDS
GGAACCTTTGCCATTTGCCA+CGG 0.551749 1_4:+2291976 Msa0143360:three_prime_UTR
TATACCACTGCTGTTCTACA+AGG 0.552313 1_4:-2291352 None:intergenic
AGGAAGGATGGTATGATGAC+CGG 0.553507 1_4:+2291305 Msa0143360:intron
TAAAAGTTGAATTATGGCAA+TGG 0.555361 1_4:+2291896 Msa0143360:three_prime_UTR
CATTTGAAAGTAGATACCTT+AGG 0.555720 1_4:-2283242 None:intergenic
TGGATGAATATAAGTTTGAT+GGG 0.556175 1_4:+2283277 Msa0143360:CDS
TCTTGTCACCAACCAAGGCT+TGG 0.556423 1_4:-2286124 None:intergenic
TATACATAATTTACCTAGCA+AGG 0.557284 1_4:-2291662 None:intergenic
TTGTTAATGATCTCATTCAT+GGG 0.558313 1_4:+2284412 Msa0143360:CDS
GTCAAATAAACTTACCAGGA+TGG 0.558622 1_4:-2286698 None:intergenic
ACAGAGAATTTGATCCAAGC+AGG 0.558813 1_4:-2280012 None:intergenic
GCTGGTAGAATAGAAGAAGA+TGG 0.559475 1_4:+2272361 Msa0143360:exon
AGGAATTGGTGGTGAACCAT+CGG 0.561100 1_4:-2278099 None:intergenic
CTGAATAAGTCCAGCTTACG+CGG 0.561459 1_4:+2272425 Msa0143360:CDS
AAGTTGGCTGTTTAAAGCCA+GGG 0.561656 1_4:+2290310 Msa0143360:CDS
ATGCACAAACACTTGGACGT+TGG 0.564239 1_4:-2291632 None:intergenic
GTACACTCATCATGGACTGC+AGG 0.564730 1_4:+2283329 Msa0143360:CDS
GGAAGATGTTGATCACCCCT+TGG 0.564815 1_4:-2286857 None:intergenic
ATGCAGGCGTAGATTTGACT+TGG 0.564838 1_4:+2286922 Msa0143360:CDS
ACGGGGTTATCATTGGATGT+GGG 0.565206 1_4:+2283082 Msa0143360:CDS
CCATGCATCAAGTAATACAT+TGG 0.565924 1_4:+2283007 Msa0143360:CDS
TTCTTGCCAAATAATGCCGA+TGG 0.566769 1_4:+2278083 Msa0143360:CDS
GAGGAAATTGACAAGTATGA+AGG 0.567138 1_4:+2275743 Msa0143360:CDS
TTTAACATGCACAAGTTGCA+TGG 0.567477 1_4:+2291719 Msa0143360:three_prime_UTR
GAGCCAGTTGAACTGTCAGT+TGG 0.569767 1_4:+2291400 Msa0143360:CDS
GTGCGCTGCTGCTACACCCG+TGG 0.572270 1_4:-2291993 None:intergenic
CCTAAGGTCATTCCTCCACC+TGG 0.572588 1_4:+2274702 Msa0143360:CDS
CAGAGTTATAATCTTCGAAA+GGG 0.572676 1_4:+2290233 Msa0143360:CDS
CAGGCATTACTTACAGAGAG+TGG 0.575455 1_4:+2276629 Msa0143360:CDS
AATGTGAAACATCAAAAGTA+CGG 0.576341 1_4:+2291751 Msa0143360:three_prime_UTR
TGCCTTCCGACTCAAGATGG+TGG 0.576863 1_4:+2284679 Msa0143360:CDS
CCAATGTATTACTTGATGCA+TGG 0.577344 1_4:-2283007 None:intergenic
CAAATGCAGATGTAATGACC+CGG 0.579893 1_4:+2277621 Msa0143360:CDS
TAGCAGTTATAGAGAGGTCG+GGG 0.583263 1_4:+2274575 Msa0143360:CDS
TCATATATCCTAATTGATTG+TGG 0.585271 1_4:-2281397 None:intergenic
ACACCCGTGGCAAATGGCAA+AGG 0.585911 1_4:-2291980 None:intergenic
TTCTGATGGATATTGTACAT+AGG 0.587068 1_4:+2282341 Msa0143360:CDS
CTAATGGCACAGTAGTTCCT+GGG 0.588563 1_4:+2286879 Msa0143360:CDS
GTACAATTACTTCATTATCA+CGG 0.592364 1_4:-2291921 None:intergenic
ACAGAGTTATAATCTTCGAA+AGG 0.593777 1_4:+2290232 Msa0143360:CDS
CTATGGGCCTTGGTGGTGAA+GGG 0.595256 1_4:+2286646 Msa0143360:CDS
AAAAGTTAGGCTTCACACGC+AGG 0.597584 1_4:+2275795 Msa0143360:CDS
AAACGAGGAAGGAACGAGGC+CGG 0.600517 1_4:-2291324 None:intergenic
TCCCACCATCTTGAGTCGGA+AGG 0.600993 1_4:-2284681 None:intergenic
CAGTTCCATCAAACATGTTG+AGG 0.601308 1_4:-2283034 None:intergenic
AGGATATATGAGGCACACGT+TGG 0.602093 1_4:+2281409 Msa0143360:CDS
TATAACCTCAGAGGATGCAC+AGG 0.605296 1_4:+2273609 Msa0143360:CDS
AAGCTGGACTTATTCAGAGA+AGG 0.606001 1_4:-2272419 None:intergenic
ATTTCTTTGCACCTAGCAGT+CGG 0.606389 1_4:+2282257 Msa0143360:CDS
TGAGTCGGAAGGCAGAATGT+TGG 0.607483 1_4:-2284670 None:intergenic
GGTTCACCACCAATTCCTCA+TGG 0.612304 1_4:+2278104 Msa0143360:CDS
TGCACCTTGTAGAACAGCAG+TGG 0.614846 1_4:+2291348 Msa0143360:CDS
CAATATCCATCAGAACAAGC+AGG 0.616718 1_4:-2282333 None:intergenic
ATATGGCCGTTGCCGACAAG+TGG 0.617693 1_4:+2284725 Msa0143360:CDS
TAGTGTCTTGTCACCAACCA+AGG 0.622013 1_4:-2286129 None:intergenic
AGTTGCCTTAGTCTAAATGG+TGG 0.622129 1_4:+2291955 Msa0143360:three_prime_UTR
ATTGAGTCCTTGATTCCAGA+GGG 0.622761 1_4:-2279988 None:intergenic
TACTTTCAAATGCTAGATGG+TGG 0.623000 1_4:+2283253 Msa0143360:CDS
GAAATTGACAAGTATGAAGG+TGG 0.625763 1_4:+2275746 Msa0143360:CDS
AGGCATTACTTACAGAGAGT+GGG 0.626504 1_4:+2276630 Msa0143360:CDS
GTTATCTGGGTGGAGAAGTG+AGG 0.626869 1_4:-2272123 None:intergenic
CAGAACTCAACCAAAATGTG+TGG 0.627019 1_4:+2291573 Msa0143360:three_prime_UTR
AGAAGCGCGTTGTTTAAGAA+CGG 0.628458 1_4:-2272303 None:intergenic
TCTACTCCTCTAATTGATCG+TGG 0.628590 1_4:+2286591 Msa0143360:CDS
AGCAGCTAGCAGTTATAGAG+AGG 0.629047 1_4:+2274569 Msa0143360:CDS
AGAGAGGTCGGGGATGACAA+AGG 0.629407 1_4:+2274585 Msa0143360:CDS
GGTATATGCTCTTGTAGATG+GGG 0.630358 1_4:+2291369 Msa0143360:CDS
TAGAATCTTACCTCCTCTGG+GGG 0.634690 1_4:-2280078 None:intergenic
CCAATCCCACCATCTTGAGT+CGG 0.634811 1_4:-2284685 None:intergenic
ACAAGGTGCATAAACGAGGA+AGG 0.636541 1_4:-2291335 None:intergenic
TGAAAGTCATGACCAAGCCT+TGG 0.637332 1_4:+2286112 Msa0143360:CDS
TTATCAAAGAATTGTCATCA+GGG 0.638729 1_4:-2291463 None:intergenic
ATTCGTAAACAGAGCCAAGT+GGG 0.638883 1_4:+2272039 None:intergenic
AATTGAGTCCTTGATTCCAG+AGG 0.642577 1_4:-2279989 None:intergenic
TTCTACAAGGTGCATAAACG+AGG 0.642785 1_4:-2291339 None:intergenic
GAAGAATGGCGTTATCTGGG+TGG 0.644841 1_4:-2272133 None:intergenic
AAATGCAGATGTAATGACCC+GGG 0.645298 1_4:+2277622 Msa0143360:CDS
GAAAATTGAATACAAAGACC+AGG 0.647072 1_4:-2290260 None:intergenic
GTGCAAAGAAATTAGTAACA+TGG 0.649260 1_4:-2282246 None:intergenic
TAAATTATGTATAGCACACA+AGG 0.649271 1_4:+2291672 Msa0143360:three_prime_UTR
TTAAATACCCTTCACCACCA+AGG 0.651004 1_4:-2286653 None:intergenic
TTCATTACTCGAGAATGATG+AGG 0.651745 1_4:-2272498 None:intergenic
AGTCATGACCAAGCCTTGGT+TGG 0.651773 1_4:+2286116 Msa0143360:CDS
TCCACACACTGACAAACAGA+AGG 0.655576 1_4:+2286063 Msa0143360:CDS
TATTTCCATTCTGGTTCACG+GGG 0.658866 1_4:+2283065 Msa0143360:CDS
ACACACTGACAAACAGAAGG+TGG 0.661299 1_4:+2286066 Msa0143360:CDS
CGCTCAAGCCAAGAAGACAT+CGG 0.662964 1_4:+2274647 Msa0143360:CDS
TTCCAGAGGGTGTATCCATG+TGG 0.663359 1_4:-2279975 None:intergenic
TACTGCTGAGTACTTCACTT+CGG 0.666939 1_4:+2290825 Msa0143360:CDS
AAATCCTGATATAACCTCAG+AGG 0.671579 1_4:+2273600 Msa0143360:CDS
CTTATTCAGAGAAGGAACAA+CGG 0.677922 1_4:-2272411 None:intergenic
AATTCGTAAACAGAGCCAAG+TGG 0.678069 1_4:+2272038 None:intergenic
TATATATTTGTAGATCCACA+TGG 0.681349 1_4:+2279960 Msa0143360:intron
GTAGAATCTTACCTCCTCTG+GGG 0.686433 1_4:-2280079 None:intergenic
AAGCACCTGTGCATCCTCTG+AGG 0.688135 1_4:-2273614 None:intergenic
ACCGGAAATCAAGATGCTGA+CGG 0.690052 1_4:-2274770 None:intergenic
GCATAAACGAGGAAGGAACG+AGG 0.709574 1_4:-2291328 None:intergenic
GATAATGAAGTAATTGTACA+CGG 0.715898 1_4:+2291925 Msa0143360:three_prime_UTR
AATAAGTCCAGCTTACGCGG+TGG 0.725243 1_4:+2272428 Msa0143360:CDS
ACCTTGACTCGAGAACCATG+AGG 0.796326 1_4:-2278119 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATATAAAAAAATAAAAAAA+AGG + chr1_4:2284168-2284187 Msa0143360:intron 0.0%
!!! TTAATTTAATTTAATGATGA+TGG - chr1_4:2272187-2272206 None:intergenic 10.0%
!!! TATAGTTATTTAGAATTTAA+TGG + chr1_4:2277090-2277109 Msa0143360:intron 10.0%
!!! ATATATTATTTTCATTTTTC+TGG + chr1_4:2282386-2282405 Msa0143360:intron 10.0%
!! AAATATTATATATGTTCAAA+AGG + chr1_4:2285446-2285465 Msa0143360:intron 10.0%
!! AATATTATATATGTTCAAAA+GGG + chr1_4:2285447-2285466 Msa0143360:intron 10.0%
!! AAAATGATTTGATTAATGTA+CGG - chr1_4:2272160-2272179 None:intergenic 15.0%
!! TTAAAAATCAGTATTAAAAC+AGG - chr1_4:2272718-2272737 None:intergenic 15.0%
!!! AGTAAACTTTATTGAATTTT+AGG + chr1_4:2276060-2276079 Msa0143360:intron 15.0%
!!! GTATACTTCATTTTAATTAT+TGG + chr1_4:2276667-2276686 Msa0143360:intron 15.0%
!!! TAAAAACATTTTAAAATCGT+AGG + chr1_4:2276768-2276787 Msa0143360:intron 15.0%
!! TATAATGATAGAATTGAAAA+AGG - chr1_4:2277411-2277430 None:intergenic 15.0%
!!! ATATATTTTCAAACAAAACT+CGG + chr1_4:2277428-2277447 Msa0143360:intron 15.0%
!!! TTGGTATTTTGAATATTTTT+TGG + chr1_4:2278405-2278424 Msa0143360:intron 15.0%
!! AAATATCTGAAAAAATTATG+TGG - chr1_4:2278486-2278505 None:intergenic 15.0%
!!! AATTGATTTTACAATTTTTC+TGG + chr1_4:2278790-2278809 Msa0143360:intron 15.0%
!! CAAAATTCTGAATATTTATA+GGG - chr1_4:2280366-2280385 None:intergenic 15.0%
!! ACAAAATTCTGAATATTTAT+AGG - chr1_4:2280367-2280386 None:intergenic 15.0%
!!! ATTAGTACAAATTTTCTTTT+AGG - chr1_4:2281039-2281058 None:intergenic 15.0%
!!! TTATATTTTTCTCTTTTTAC+AGG + chr1_4:2281339-2281358 Msa0143360:intron 15.0%
!! AGTAAAATTATAAATTAGAG+AGG - chr1_4:2282773-2282792 None:intergenic 15.0%
!! TTACTTACTAAAAAAAATGT+AGG - chr1_4:2283823-2283842 None:intergenic 15.0%
!! TGAACATATATAATATTTCT+GGG - chr1_4:2285444-2285463 None:intergenic 15.0%
!! TTGAACATATATAATATTTC+TGG - chr1_4:2285445-2285464 None:intergenic 15.0%
!! ATATTATATATGTTCAAAAG+GGG + chr1_4:2285448-2285467 Msa0143360:intron 15.0%
!! AATTATTCTTCATTTACATT+TGG - chr1_4:2285780-2285799 None:intergenic 15.0%
!!! TTTTTTTTTTAAGAAGAGAT+TGG + chr1_4:2286246-2286265 Msa0143360:intron 15.0%
!!! TTTTTTTTTAAGAAGAGATT+GGG + chr1_4:2286247-2286266 Msa0143360:intron 15.0%
!!! TATTGCTTTTGTTTAATAAA+TGG + chr1_4:2286474-2286493 Msa0143360:intron 15.0%
!!! AACTTAATTTATCATTGATT+TGG - chr1_4:2286797-2286816 None:intergenic 15.0%
!!! TATTGAAGACAATTTTTTAT+AGG + chr1_4:2287328-2287347 Msa0143360:intron 15.0%
!!! ATTGAAGACAATTTTTTATA+GGG + chr1_4:2287329-2287348 Msa0143360:intron 15.0%
!! AAAATCAGGTTAATTAAAAT+AGG - chr1_4:2288173-2288192 None:intergenic 15.0%
!! ATAAGAAAGAAGATTAAAAT+TGG - chr1_4:2290550-2290569 None:intergenic 15.0%
!!! CATTTTGAAACAAATTTTTT+TGG - chr1_4:2290974-2290993 None:intergenic 15.0%
!! GAATAAAAATAAAGTTGTAT+TGG - chr1_4:2291014-2291033 None:intergenic 15.0%
!!! TATCTTTTTTTTACATTCTT+GGG + chr1_4:2291210-2291229 Msa0143360:intron 15.0%
!!! TTAACACTTTTTACAAACTT+TGG + chr1_4:2272278-2272297 Msa0143360:five_prime_UTR 20.0%
!!! GTTTTGATTCTATTTTAGTA+GGG + chr1_4:2272797-2272816 Msa0143360:intron 20.0%
!!! ATGAGAAAATTTTGCATATA+GGG - chr1_4:2273485-2273504 None:intergenic 20.0%
!! ATATATAAACATATTCGACA+TGG - chr1_4:2273649-2273668 None:intergenic 20.0%
!! TCTAAATAGATTTCACATAT+CGG - chr1_4:2273993-2274012 None:intergenic 20.0%
!! AAAAGACTAAAATATGCATT+CGG - chr1_4:2274496-2274515 None:intergenic 20.0%
!! ATATTTCATGCTGTTATATT+GGG + chr1_4:2274900-2274919 Msa0143360:intron 20.0%
!! TCTTTGAATATATGATTTGA+TGG - chr1_4:2275233-2275252 None:intergenic 20.0%
!! ATGTTAATCAAATAATTGTG+AGG - chr1_4:2275574-2275593 None:intergenic 20.0%
!!! TTAAAAGCACAAAATTAGTA+GGG - chr1_4:2275627-2275646 None:intergenic 20.0%
!!! ATTAAAAGCACAAAATTAGT+AGG - chr1_4:2275628-2275647 None:intergenic 20.0%
!!! TTTTGATTTCTTCTTGTAAT+TGG - chr1_4:2276030-2276049 None:intergenic 20.0%
!! ATTACAAGAAGAAATCAAAA+TGG + chr1_4:2276030-2276049 Msa0143360:intron 20.0%
!!! TTTATTGAATTTTAGGTTTC+TGG + chr1_4:2276067-2276086 Msa0143360:intron 20.0%
!! TTAAGTAATTTCATAGTGTA+AGG + chr1_4:2276499-2276518 Msa0143360:intron 20.0%
!! ACAATCATTATATAGACAAT+AGG - chr1_4:2277247-2277266 None:intergenic 20.0%
!! TACATGAAATCAGTTTATTT+GGG + chr1_4:2277280-2277299 Msa0143360:intron 20.0%
!! CATTCTTTGTAAAATTGAAT+TGG + chr1_4:2277785-2277804 Msa0143360:intron 20.0%
!! TACTAAATATTGTCAAATAG+CGG - chr1_4:2278290-2278309 None:intergenic 20.0%
!!! CTTTTTATTTCCTTTATTGT+TGG + chr1_4:2278386-2278405 Msa0143360:intron 20.0%
!! ATTCAAAATACCAACAATAA+AGG - chr1_4:2278399-2278418 None:intergenic 20.0%
!! AAAAGGAAAATATTATTCGA+TGG + chr1_4:2278594-2278613 Msa0143360:intron 20.0%
!!! TCTTCCTTTTAGATTTTTTA+AGG + chr1_4:2278682-2278701 Msa0143360:intron 20.0%
!! TCATCCTTAAAAAATCTAAA+AGG - chr1_4:2278689-2278708 None:intergenic 20.0%
!! TATCATTTATGCAATTGTTA+TGG + chr1_4:2278910-2278929 Msa0143360:intron 20.0%
!!! AAATATTCTAGAATTTAGCT+AGG + chr1_4:2278969-2278988 Msa0143360:intron 20.0%
!!! TCTATTTTTGTGTTCATATT+TGG + chr1_4:2279111-2279130 Msa0143360:intron 20.0%
!! AAATGTTTCTTCTTCATATT+TGG + chr1_4:2279146-2279165 Msa0143360:intron 20.0%
!!! ATTAGTCTAAATTTTTTCTG+TGG + chr1_4:2279597-2279616 Msa0143360:intron 20.0%
!!! TTAGTCTAAATTTTTTCTGT+GGG + chr1_4:2279598-2279617 Msa0143360:intron 20.0%
!! TCATAGTATATTCCATTATA+TGG - chr1_4:2280057-2280076 None:intergenic 20.0%
!!! AAAAATGCGATTTTTTTTGT+AGG - chr1_4:2280398-2280417 None:intergenic 20.0%
!!! AAATTTTACAAGGACTAAAA+AGG - chr1_4:2280477-2280496 None:intergenic 20.0%
!!! AAAAAGTGCGATTTTTTTTT+AGG + chr1_4:2280537-2280556 Msa0143360:intron 20.0%
!!! AAAAGTGCGATTTTTTTTTA+GGG + chr1_4:2280538-2280557 Msa0143360:intron 20.0%
!!! AAATGGGTTAATAAAGTAAA+CGG - chr1_4:2280596-2280615 None:intergenic 20.0%
!!! TAACCCATTTTTATATTATG+AGG + chr1_4:2280606-2280625 Msa0143360:intron 20.0%
!!! AACCCATTTTTATATTATGA+GGG + chr1_4:2280607-2280626 Msa0143360:intron 20.0%
!! AACCCTCATAATATAAAAAT+GGG - chr1_4:2280612-2280631 None:intergenic 20.0%
!! CTATTCAATATAATATGTGT+CGG + chr1_4:2281262-2281281 Msa0143360:intron 20.0%
!! ATTAATGAAAACAATGGATA+GGG - chr1_4:2282066-2282085 None:intergenic 20.0%
!! TCAATGATTAATGAAAACAA+TGG - chr1_4:2282072-2282091 None:intergenic 20.0%
!! AAGAAATATAGAACACAAAA+CGG - chr1_4:2282149-2282168 None:intergenic 20.0%
!!! AGAACAATATTTTTAAAGTC+AGG - chr1_4:2282212-2282231 None:intergenic 20.0%
!! AAAATAATATATAGCGTGTA+AGG - chr1_4:2282378-2282397 None:intergenic 20.0%
!! ATAAAATAATTAGAGTAGAG+AGG + chr1_4:2282709-2282728 Msa0143360:intron 20.0%
!! AATTATAAATTAGAGAGGAA+GGG - chr1_4:2282768-2282787 None:intergenic 20.0%
!! AAATTATAAATTAGAGAGGA+AGG - chr1_4:2282769-2282788 None:intergenic 20.0%
!!! AGTGACTTATTTTCTTAATT+AGG + chr1_4:2283218-2283237 Msa0143360:intron 20.0%
!! AAGAAAAAAAATTTGCATGA+AGG - chr1_4:2283619-2283638 None:intergenic 20.0%
!!! CAATTTTTCAATTATTAAGC+AGG - chr1_4:2283707-2283726 None:intergenic 20.0%
!! ATTGAAAAATTGTTCAATAG+TGG + chr1_4:2283715-2283734 Msa0143360:intron 20.0%
!!! TTCTCTTAATAAGTTTTTCT+AGG - chr1_4:2283891-2283910 None:intergenic 20.0%
!! ATAAGTATATGATTCTGTAA+AGG + chr1_4:2283958-2283977 Msa0143360:intron 20.0%
!!! AATGCTATAGATTTTAAACA+GGG + chr1_4:2284006-2284025 Msa0143360:intron 20.0%
!! GTTGAAATATATTATAGTTG+CGG + chr1_4:2284210-2284229 Msa0143360:intron 20.0%
!! TACTTCATTTAAACTGTATT+AGG + chr1_4:2284505-2284524 Msa0143360:intron 20.0%
!! ATTAGACTTATAGTTTATCT+AGG + chr1_4:2285163-2285182 Msa0143360:intron 20.0%
!! TTAGACTTATAGTTTATCTA+GGG + chr1_4:2285164-2285183 Msa0143360:intron 20.0%
!!! ACAAATATTAGATTCTCTTT+TGG + chr1_4:2285207-2285226 Msa0143360:intron 20.0%
!! ATATAAGAATATTCACCATT+AGG - chr1_4:2285728-2285747 None:intergenic 20.0%
!!! TGAAGGGTATTTAAATTTTA+TGG + chr1_4:2286662-2286681 Msa0143360:CDS 20.0%
!!! GAAGGGTATTTAAATTTTAT+GGG + chr1_4:2286663-2286682 Msa0143360:CDS 20.0%
!!! AAGGGTATTTAAATTTTATG+GGG + chr1_4:2286664-2286683 Msa0143360:CDS 20.0%
!! AAAATTGTCTTCAATAGTAA+GGG - chr1_4:2287324-2287343 None:intergenic 20.0%
!! AAAAATTGTCTTCAATAGTA+AGG - chr1_4:2287325-2287344 None:intergenic 20.0%
!!! TTGCAAAAAAAGATTCTTTT+TGG - chr1_4:2288252-2288271 None:intergenic 20.0%
!! TAACTAAGTAAAAATAGGTA+CGG - chr1_4:2289312-2289331 None:intergenic 20.0%
!! CGAAATAACTAAGTAAAAAT+AGG - chr1_4:2289317-2289336 None:intergenic 20.0%
!! AATTTGAAAAAATGAAGGTA+CGG - chr1_4:2289516-2289535 None:intergenic 20.0%
!! AATAAATGAAAAACTTACCA+AGG + chr1_4:2289696-2289715 Msa0143360:intron 20.0%
!!! TAGGGGTTAATATTATTTTT+TGG + chr1_4:2290110-2290129 Msa0143360:intron 20.0%
!!! TTTTAATAACTAAGCAGTTA+AGG + chr1_4:2290134-2290153 Msa0143360:intron 20.0%
!!! CATTTTTCCTTGAAATATAT+TGG - chr1_4:2290206-2290225 None:intergenic 20.0%
!! TATATTTCAAGGAAAAATGA+AGG + chr1_4:2290207-2290226 Msa0143360:CDS 20.0%
!! TTTAATCTTCTTTCTTATTG+TGG + chr1_4:2290552-2290571 Msa0143360:intron 20.0%
!! TTAAACATATTCCCAAATAT+TGG - chr1_4:2290716-2290735 None:intergenic 20.0%
!!! TGTCTTTTTCTTATAAAGTA+AGG + chr1_4:2291089-2291108 Msa0143360:intron 20.0%
!!! GTCTTTTTCTTATAAAGTAA+GGG + chr1_4:2291090-2291109 Msa0143360:intron 20.0%
!!! GTATCTTTTTTTTACATTCT+TGG + chr1_4:2291209-2291228 Msa0143360:intron 20.0%
!!! ATCTTTTTTTTACATTCTTG+GGG + chr1_4:2291211-2291230 Msa0143360:intron 20.0%
!! TAAGTATAAGAAATGCATAA+TGG + chr1_4:2291483-2291502 Msa0143360:three_prime_UTR 20.0%
!!! TTTTCTGTTTACACATTTTA+GGG + chr1_4:2291696-2291715 Msa0143360:three_prime_UTR 20.0%
!!! AAATTTTCTAGGGTAAATTA+AGG - chr1_4:2291839-2291858 None:intergenic 20.0%
!!! TTGATAATGTTCAATTTCGT+AGG + chr1_4:2272675-2272694 Msa0143360:intron 25.0%
!!! GGTTTTGATTCTATTTTAGT+AGG + chr1_4:2272796-2272815 Msa0143360:intron 25.0%
!!! ATTCTATTTTAGTAGGGATT+AGG + chr1_4:2272803-2272822 Msa0143360:intron 25.0%
!! TACTTTATTGACTACAGTAA+TGG + chr1_4:2272999-2273018 Msa0143360:intron 25.0%
! ATAAAAGAATCAGATTCTAC+AGG - chr1_4:2273031-2273050 None:intergenic 25.0%
! TTCTGCTTTGATATTTGTAT+TGG + chr1_4:2273069-2273088 Msa0143360:intron 25.0%
! GAAATAGTATATAATCTGAC+TGG + chr1_4:2273252-2273271 Msa0143360:intron 25.0%
! AGTAATGCTGAAAATAGAAA+TGG + chr1_4:2273341-2273360 Msa0143360:intron 25.0%
!! CATGAGAAAATTTTGCATAT+AGG - chr1_4:2273486-2273505 None:intergenic 25.0%
!! CATTTGTACTCTCATATTTT+GGG - chr1_4:2273896-2273915 None:intergenic 25.0%
!! TCATTTGTACTCTCATATTT+TGG - chr1_4:2273897-2273916 None:intergenic 25.0%
! GAATGTCAATGAAAATGTAT+CGG - chr1_4:2274042-2274061 None:intergenic 25.0%
!! AACCATTTTGTGACAATTTT+TGG + chr1_4:2274155-2274174 Msa0143360:intron 25.0%
! AACAATAGAGAAAGAGAAAA+AGG - chr1_4:2274219-2274238 None:intergenic 25.0%
!! ATTCTACTCTGTATTTCTAT+AGG + chr1_4:2274348-2274367 Msa0143360:intron 25.0%
! AACAAACCAAATGCATTTAT+AGG - chr1_4:2274385-2274404 None:intergenic 25.0%
! GTTATTACTGATCTTAGAAT+AGG + chr1_4:2274431-2274450 Msa0143360:intron 25.0%
!!! ATTTTAGTCTTTTCAGAACT+TGG + chr1_4:2274503-2274522 Msa0143360:intron 25.0%
! AGTAAAAACAGATAAACCTA+AGG + chr1_4:2274686-2274705 Msa0143360:CDS 25.0%
! CATATTTCATGCTGTTATAT+TGG + chr1_4:2274899-2274918 Msa0143360:intron 25.0%
! TATTTCATGCTGTTATATTG+GGG + chr1_4:2274901-2274920 Msa0143360:intron 25.0%
! AATGGCTTGAAGTAATTAAT+TGG + chr1_4:2275397-2275416 Msa0143360:intron 25.0%
! TTGAAGTAATTAATTGGCAA+TGG + chr1_4:2275403-2275422 Msa0143360:intron 25.0%
!!! CTAATTTGTTTTCTGGATTT+TGG - chr1_4:2275536-2275555 None:intergenic 25.0%
!!! TGAACAACTAATTTGTTTTC+TGG - chr1_4:2275543-2275562 None:intergenic 25.0%
!! TAAAAGCACAAAATTAGTAG+GGG - chr1_4:2275626-2275645 None:intergenic 25.0%
! TATATATTTCAGCGAAAATC+AGG - chr1_4:2275679-2275698 None:intergenic 25.0%
! ATGGACAGTACAAAAAAATT+CGG + chr1_4:2275720-2275739 Msa0143360:CDS 25.0%
!! GTATTATGTTGCACTTATTT+TGG + chr1_4:2275817-2275836 Msa0143360:intron 25.0%
! CTATTAAACATATCTAATGC+CGG + chr1_4:2275918-2275937 Msa0143360:intron 25.0%
!!! TTTAAGCTTGTTAATGATGA+AGG + chr1_4:2276180-2276199 Msa0143360:intron 25.0%
!!! AGTTTTAAGCTTGTTAATGA+TGG - chr1_4:2276177-2276196 None:intergenic 25.0%
! AACAGTAAATGTGCTTAAAA+AGG + chr1_4:2276533-2276552 Msa0143360:intron 25.0%
! ATATCAATCAAGTGGAAATT+AGG - chr1_4:2276572-2276591 None:intergenic 25.0%
! TAATTTCCACTTGATTGATA+TGG + chr1_4:2276571-2276590 Msa0143360:intron 25.0%
! ACAGAGATATAAAATGAAAC+TGG + chr1_4:2276909-2276928 Msa0143360:intron 25.0%
! CAGAGATATAAAATGAAACT+GGG + chr1_4:2276910-2276929 Msa0143360:intron 25.0%
!! TAAACTGATTTCATGTACTT+TGG - chr1_4:2277277-2277296 None:intergenic 25.0%
! GTACATGAAATCAGTTTATT+TGG + chr1_4:2277279-2277298 Msa0143360:intron 25.0%
! TATTTGGGTAGAAAACAAAA+AGG + chr1_4:2277295-2277314 Msa0143360:intron 25.0%
!!! AAAACAAAAAGGCATTCTAT+TGG + chr1_4:2277306-2277325 Msa0143360:intron 25.0%
! AAATTAAGAATTACATACCC+GGG - chr1_4:2277642-2277661 None:intergenic 25.0%
! GAAATTAAGAATTACATACC+CGG - chr1_4:2277643-2277662 None:intergenic 25.0%
!! CAATTTTACAAAGAATGAGT+AGG - chr1_4:2277782-2277801 None:intergenic 25.0%
! TTGTCAACTAAATCTAAGTA+AGG - chr1_4:2277992-2278011 None:intergenic 25.0%
!!! CTCCTGAAAAGATTTTTTTT+AGG + chr1_4:2278148-2278167 Msa0143360:intron 25.0%
!! CTCCTAAAAAAAATCTTTTC+AGG - chr1_4:2278153-2278172 None:intergenic 25.0%
! CATATGTTTCATATAGTCAT+TGG + chr1_4:2278187-2278206 Msa0143360:intron 25.0%
!! ATTTTTCCAAATATGTGAAC+TGG + chr1_4:2278458-2278477 Msa0143360:intron 25.0%
! CTTATAACACTAACAAGAAA+AGG + chr1_4:2278577-2278596 Msa0143360:intron 25.0%
! AAAATTATGGAACATAGAGA+TGG - chr1_4:2278642-2278661 None:intergenic 25.0%
! GTTGAAAAGATGTTATCTTA+AGG + chr1_4:2278709-2278728 Msa0143360:intron 25.0%
! TTTAATGAGCTTGTATGATT+AGG - chr1_4:2278771-2278790 None:intergenic 25.0%
! AGTGTGTATAAATGACTAAA+TGG + chr1_4:2278887-2278906 Msa0143360:intron 25.0%
! TTCGTAACTTTCAAAGAATT+CGG + chr1_4:2279232-2279251 Msa0143360:intron 25.0%
!! TTTTTATTCTTTCCTACCTA+AGG + chr1_4:2279302-2279321 Msa0143360:intron 25.0%
!! AAAGATTTTCTAACATTGAG+AGG + chr1_4:2279406-2279425 Msa0143360:intron 25.0%
!!! GGTTTTATGTTTCTTTTACT+AGG + chr1_4:2279759-2279778 Msa0143360:intron 25.0%
!!! GCTGTCATATTTACTTTTTT+AGG - chr1_4:2279846-2279865 None:intergenic 25.0%
! TATATATTTGTAGATCCACA+TGG + chr1_4:2279960-2279979 Msa0143360:intron 25.0%
! TCATATTTATGACCTTTCTT+TGG + chr1_4:2280196-2280215 Msa0143360:intron 25.0%
! TATAGGGTTAATTACTTAAG+TGG + chr1_4:2280339-2280358 Msa0143360:intron 25.0%
!! AAATTTTCCGTTAGCATTTT+TGG + chr1_4:2280491-2280510 Msa0143360:intron 25.0%
! GAACCCTCATAATATAAAAA+TGG - chr1_4:2280613-2280632 None:intergenic 25.0%
! TAAAAAGTTGTATTGGAAGA+GGG + chr1_4:2280796-2280815 Msa0143360:intron 25.0%
!!! TTTTCTTTTAGGCTTTGTTT+GGG - chr1_4:2281028-2281047 None:intergenic 25.0%
!!! ATTTTCTTTTAGGCTTTGTT+TGG - chr1_4:2281029-2281048 None:intergenic 25.0%
! ATTTATCAGTAACAGTTTAC+CGG + chr1_4:2281204-2281223 Msa0143360:intron 25.0%
! ATTATATTGAATAGCACCTA+AGG - chr1_4:2281256-2281275 None:intergenic 25.0%
! TCATATATCCTAATTGATTG+TGG - chr1_4:2281400-2281419 None:intergenic 25.0%
! ACAATCAATTAGGATATATG+AGG + chr1_4:2281399-2281418 Msa0143360:CDS 25.0%
!! TTGTTATTGTGTATCATCAA+TGG + chr1_4:2281481-2281500 Msa0143360:intron 25.0%
!! ATTATTTGTTACATGCAACA+AGG + chr1_4:2281694-2281713 Msa0143360:intron 25.0%
! AGTTCATCTATAAAGTTCAA+TGG + chr1_4:2281840-2281859 Msa0143360:intron 25.0%
! GATTAATGAAAACAATGGAT+AGG - chr1_4:2282067-2282086 None:intergenic 25.0%
! CTAGAATAAATCTTCACAAT+CGG + chr1_4:2282845-2282864 Msa0143360:intron 25.0%
!! ATTTTCTTAATTAGGTCCTA+AGG + chr1_4:2283226-2283245 Msa0143360:intron 25.0%
! TGGATGAATATAAGTTTGAT+GGG + chr1_4:2283277-2283296 Msa0143360:CDS 25.0%
! TATTTCCAAGTGAAGAAAAA+AGG + chr1_4:2283444-2283463 Msa0143360:intron 25.0%
! ATTTCCAAGTGAAGAAAAAA+GGG + chr1_4:2283445-2283464 Msa0143360:intron 25.0%
! ATATATGAATAGGAGAACAA+AGG + chr1_4:2283851-2283870 Msa0143360:intron 25.0%
! TATATGAATAGGAGAACAAA+GGG + chr1_4:2283852-2283871 Msa0143360:intron 25.0%
!! GAATGCTATAGATTTTAAAC+AGG + chr1_4:2284005-2284024 Msa0143360:intron 25.0%
! ACATATAGTCAGTTTACTAT+AGG + chr1_4:2284070-2284089 Msa0143360:intron 25.0%
! TTCTCATTTCAATCAGATAT+AGG + chr1_4:2284253-2284272 Msa0143360:intron 25.0%
!! AAGGTTCAAGAATCTTTTTA+AGG - chr1_4:2284312-2284331 None:intergenic 25.0%
!! GGAAATTACAATGAGTATTT+TGG + chr1_4:2284351-2284370 Msa0143360:CDS 25.0%
! TTGTTAATGATCTCATTCAT+GGG + chr1_4:2284412-2284431 Msa0143360:CDS 25.0%
!!! TTTTAATTGAGTCAAGTAGA+GGG - chr1_4:2284601-2284620 None:intergenic 25.0%
!!! ATTTTAATTGAGTCAAGTAG+AGG - chr1_4:2284602-2284621 None:intergenic 25.0%
! TATAGTGCATTTGTGTAAAA+TGG + chr1_4:2284853-2284872 Msa0143360:intron 25.0%
!!! TTCGTTCATGTTTTGATATA+AGG - chr1_4:2284904-2284923 None:intergenic 25.0%
! TAACATTATTTGTAGTCCAA+TGG - chr1_4:2285024-2285043 None:intergenic 25.0%
! AATGCTAAAACATTTGTGAA+TGG + chr1_4:2285043-2285062 Msa0143360:intron 25.0%
! ATGCTAAAACATTTGTGAAT+GGG + chr1_4:2285044-2285063 Msa0143360:intron 25.0%
!!! ATCTGATTTGCTTATACTAA+GGG - chr1_4:2285626-2285645 None:intergenic 25.0%
!!! TATCTGATTTGCTTATACTA+AGG - chr1_4:2285627-2285646 None:intergenic 25.0%
! TATGTTATTGCTAAGAAGTT+TGG + chr1_4:2285691-2285710 Msa0143360:intron 25.0%
! ATGTTATTGCTAAGAAGTTT+GGG + chr1_4:2285692-2285711 Msa0143360:intron 25.0%
!!! GTTATCTAATTTTTTGCATC+CGG + chr1_4:2285855-2285874 Msa0143360:intron 25.0%
!! ATCGAATTATGTCTTTTTGT+TGG + chr1_4:2285929-2285948 Msa0143360:intron 25.0%
! TTCCTACATAAAAAACGATA+TGG - chr1_4:2286011-2286030 None:intergenic 25.0%
! TTGCATTACACAAAATGATT+AGG + chr1_4:2286616-2286635 Msa0143360:CDS 25.0%
! AATGATTAGGCTTATTACTA+TGG + chr1_4:2286629-2286648 Msa0143360:CDS 25.0%
! ATGATTAGGCTTATTACTAT+GGG + chr1_4:2286630-2286649 Msa0143360:CDS 25.0%
!! AATTTTATGGGGAATGAATT+CGG + chr1_4:2286675-2286694 Msa0143360:CDS 25.0%
! TTAAGTCAAATAAACTTACC+AGG - chr1_4:2286705-2286724 None:intergenic 25.0%
! ATCGGAAAAATGTTAGTATA+TGG - chr1_4:2287138-2287157 None:intergenic 25.0%
! CTTAATTTACAACACAAAAC+TGG - chr1_4:2287238-2287257 None:intergenic 25.0%
!! TATTGGTTAAAAACCAGATT+TGG - chr1_4:2287490-2287509 None:intergenic 25.0%
!! CTTGATCTCATATTTTGTAT+TGG - chr1_4:2287507-2287526 None:intergenic 25.0%
! TTGATGTATCTTTGATGAAT+AGG - chr1_4:2287574-2287593 None:intergenic 25.0%
! AGTAAACATATATTACCACA+AGG + chr1_4:2288378-2288397 Msa0143360:intron 25.0%
! AAAATTGCAAAGTGAATTTC+TGG - chr1_4:2288548-2288567 None:intergenic 25.0%
!!! TTCACTTTGCAATTTTAGTT+TGG + chr1_4:2288552-2288571 Msa0143360:intron 25.0%
!! TATATCTCTCAGATTTTATC+AGG - chr1_4:2288870-2288889 None:intergenic 25.0%
! TGATAAAATCTGAGAGATAT+AGG + chr1_4:2288869-2288888 Msa0143360:intron 25.0%
!! TATATCTCTCAGATTTTATC+AGG - chr1_4:2288870-2288889 None:intergenic 25.0%
! TGATAAAATCTGAGAGATAT+AGG + chr1_4:2288869-2288888 Msa0143360:intron 25.0%
!! CATCAAAAGCAAGATAATTT+TGG - chr1_4:2289383-2289402 None:intergenic 25.0%
!! CTTTTGATGAAAATAGTAGA+GGG + chr1_4:2289394-2289413 Msa0143360:intron 25.0%
!! TTTTGATGAAAATAGTAGAG+GGG + chr1_4:2289395-2289414 Msa0143360:intron 25.0%
!! ATTTGAAAAAATGAAGGTAC+GGG - chr1_4:2289515-2289534 None:intergenic 25.0%
! ATCATCTATGTTTCTTAATC+AGG + chr1_4:2289744-2289763 Msa0143360:intron 25.0%
! TCATCTATGTTTCTTAATCA+GGG + chr1_4:2289745-2289764 Msa0143360:intron 25.0%
!! TTGATTTAGAGATAACTTGT+AGG + chr1_4:2289928-2289947 Msa0143360:intron 25.0%
!!! TTTTTTCTCACAAATGAGAT+AGG + chr1_4:2290091-2290110 Msa0143360:intron 25.0%
!! TTTTTCTCACAAATGAGATA+GGG + chr1_4:2290092-2290111 Msa0143360:intron 25.0%
!! TCTTTGTATTCAATTTTCAC+TGG + chr1_4:2290265-2290284 Msa0143360:CDS 25.0%
! TTTGTAATCTGAATAACTGT+TGG - chr1_4:2290292-2290311 None:intergenic 25.0%
! AGTTATTCAGATTACAAAGT+TGG + chr1_4:2290294-2290313 Msa0143360:CDS 25.0%
! CTATCTATGTATTATTACTC+TGG + chr1_4:2290345-2290364 Msa0143360:intron 25.0%
!! ATAGCTTTGCATAATTGTAA+AGG - chr1_4:2290398-2290417 None:intergenic 25.0%
! TGATGAAAATGATGTTTCTT+AGG - chr1_4:2290436-2290455 None:intergenic 25.0%
!! ATTAAAATTGGTTCACTTGA+GGG - chr1_4:2290538-2290557 None:intergenic 25.0%
!! TACTTTTCTGTTCCAATATT+TGG + chr1_4:2290701-2290720 Msa0143360:intron 25.0%
!! ACTTTTCTGTTCCAATATTT+GGG + chr1_4:2290702-2290721 Msa0143360:intron 25.0%
! GAATATGTTTAACCTCTTAT+TGG + chr1_4:2290724-2290743 Msa0143360:intron 25.0%
! TTTCTTTGTGAAAATGTTCA+AGG + chr1_4:2290869-2290888 Msa0143360:intron 25.0%
! ATTGCACACAAATTAAGAAA+TGG - chr1_4:2291155-2291174 None:intergenic 25.0%
!!! TTTCTTAATTTGTGTGCAAT+TGG + chr1_4:2291155-2291174 Msa0143360:intron 25.0%
! TTATCAAAGAATTGTCATCA+GGG - chr1_4:2291466-2291485 None:intergenic 25.0%
! CTAGTTAACTTAATCTTTAG+TGG + chr1_4:2291600-2291619 Msa0143360:three_prime_UTR 25.0%
! TATACATAATTTACCTAGCA+AGG - chr1_4:2291665-2291684 None:intergenic 25.0%
! TAAATTATGTATAGCACACA+AGG + chr1_4:2291672-2291691 Msa0143360:three_prime_UTR 25.0%
!! CTTTTCTGTTTACACATTTT+AGG + chr1_4:2291695-2291714 Msa0143360:three_prime_UTR 25.0%
! AATGTGAAACATCAAAAGTA+CGG + chr1_4:2291751-2291770 Msa0143360:three_prime_UTR 25.0%
!!! ATTCAACTTTTAACTCTGAA+CGG - chr1_4:2291888-2291907 None:intergenic 25.0%
! CAGAGTTAAAAGTTGAATTA+TGG + chr1_4:2291890-2291909 Msa0143360:three_prime_UTR 25.0%
! TAAAAGTTGAATTATGGCAA+TGG + chr1_4:2291896-2291915 Msa0143360:three_prime_UTR 25.0%
! GTACAATTACTTCATTATCA+CGG - chr1_4:2291924-2291943 None:intergenic 25.0%
! GATAATGAAGTAATTGTACA+CGG + chr1_4:2291925-2291944 Msa0143360:three_prime_UTR 25.0%
!! TTTCTTTTCAATAAGACATG+AGG - chr1_4:2292056-2292075 None:intergenic 25.0%
TATAAGAGTTGAGTTTAGCA+TGG - chr1_4:2272082-2272101 None:intergenic 30.0%
ACAATATATAAACCCTAAGC+TGG + chr1_4:2272343-2272362 Msa0143360:five_prime_UTR 30.0%
AAGATGGTTTATACCATTTC+AGG + chr1_4:2272377-2272396 Msa0143360:exon 30.0%
TCCGTTACATTATGCTAATT+CGG + chr1_4:2272555-2272574 Msa0143360:intron 30.0%
TCCGAATTAGCATAATGTAA+CGG - chr1_4:2272559-2272578 None:intergenic 30.0%
! TGATCGTTTAAAACATGCAT+TGG + chr1_4:2272591-2272610 Msa0143360:intron 30.0%
!!! TTCATGATTTTTTGAGCTCA+AGG + chr1_4:2272861-2272880 Msa0143360:intron 30.0%
!! TTCTGAGTTTGTTATGGATT+GGG + chr1_4:2272912-2272931 Msa0143360:intron 30.0%
TACTGTAGTCAATAAAGTAC+TGG - chr1_4:2272998-2273017 None:intergenic 30.0%
TCTGCGATTTGATATTGAAA+GGG + chr1_4:2273230-2273249 Msa0143360:intron 30.0%
! GTGATATGTAACTTTTACTC+TGG + chr1_4:2273372-2273391 Msa0143360:intron 30.0%
AACCTCGCTGATATAATATA+TGG + chr1_4:2273443-2273462 Msa0143360:intron 30.0%
AACCATATATTATATCAGCG+AGG - chr1_4:2273448-2273467 None:intergenic 30.0%
TTTATCAGATTCAGCAATTG+TGG - chr1_4:2273527-2273546 None:intergenic 30.0%
!!! ATTTTCTAGTTGATCTGTCA+CGG - chr1_4:2273584-2273603 None:intergenic 30.0%
TGAGCAAATAAAGATTCTAG+TGG + chr1_4:2273828-2273847 Msa0143360:intron 30.0%
!! GTACGCATAATTTTGATCTT+TGG + chr1_4:2273955-2273974 Msa0143360:intron 30.0%
TGGGAAAGATTGATAAAGTT+TGG - chr1_4:2274064-2274083 None:intergenic 30.0%
TTATCAATCTTTCCCAACTT+AGG + chr1_4:2274068-2274087 Msa0143360:intron 30.0%
GTCCAAAAATTGTCACAAAA+TGG - chr1_4:2274160-2274179 None:intergenic 30.0%
TTCTTCTTCTCTCTTCTTAT+TGG - chr1_4:2274247-2274266 None:intergenic 30.0%
AATAAGAAGAGAGAAGAAGA+AGG + chr1_4:2274246-2274265 Msa0143360:intron 30.0%
GTACTTATTCTCATCTTTCA+TGG - chr1_4:2274538-2274557 None:intergenic 30.0%
!!! ATGCAAAGTTTTGAATGTTG+CGG + chr1_4:2274848-2274867 Msa0143360:intron 30.0%
ATTTCATGCTGTTATATTGG+GGG + chr1_4:2274902-2274921 Msa0143360:intron 30.0%
TATTGTTGTCAGTTATGCAA+TGG + chr1_4:2275353-2275372 Msa0143360:intron 30.0%
TCACTTGAGTATCATTTGAA+TGG + chr1_4:2275379-2275398 Msa0143360:intron 30.0%
TTGGCAATGGACAAATAAAA+AGG + chr1_4:2275416-2275435 Msa0143360:intron 30.0%
! GGACAAATAAAAAGGTGTAT+CGG + chr1_4:2275424-2275443 Msa0143360:intron 30.0%
TATATATACCCACTATAACC+AGG - chr1_4:2275454-2275473 None:intergenic 30.0%
! TTGTTTTCTGGATTTTGGAT+TGG - chr1_4:2275531-2275550 None:intergenic 30.0%
! AAAAGCACAAAATTAGTAGG+GGG - chr1_4:2275625-2275644 None:intergenic 30.0%
! TTTTTCTCAAATCACAGCTA+TGG + chr1_4:2275701-2275720 Msa0143360:intron 30.0%
TGGACAGTACAAAAAAATTC+GGG + chr1_4:2275721-2275740 Msa0143360:CDS 30.0%
TAGTAACTTATGACACAGAA+GGG - chr1_4:2275866-2275885 None:intergenic 30.0%
TTAGTAACTTATGACACAGA+AGG - chr1_4:2275867-2275886 None:intergenic 30.0%
!!! ATTTTAGGTTTCTGGAATAC+AGG + chr1_4:2276075-2276094 Msa0143360:intron 30.0%
!!! TTTTAGGTTTCTGGAATACA+GGG + chr1_4:2276076-2276095 Msa0143360:intron 30.0%
GTGGAGCAGTATTATAAAAA+GGG - chr1_4:2276411-2276430 None:intergenic 30.0%
TGTGGAGCAGTATTATAAAA+AGG - chr1_4:2276412-2276431 None:intergenic 30.0%
! AAAAACCTGAGTATGTTTTG+TGG - chr1_4:2276430-2276449 None:intergenic 30.0%
TTTGAACACAAACTAGAACA+GGG - chr1_4:2276700-2276719 None:intergenic 30.0%
ATTTGAACACAAACTAGAAC+AGG - chr1_4:2276701-2276720 None:intergenic 30.0%
AAATAGTAGTCATAACGTGT+TGG - chr1_4:2276961-2276980 None:intergenic 30.0%
TTGCAATATCTATGCTTTCT+TGG + chr1_4:2276980-2276999 Msa0143360:intron 30.0%
CATGTAAACATTGAACTACA+AGG - chr1_4:2277065-2277084 None:intergenic 30.0%
TTAAAGACAAGTTACATGCA+CGG - chr1_4:2277474-2277493 None:intergenic 30.0%
TAGTTGGAGATTTCAACAAT+TGG + chr1_4:2277594-2277613 Msa0143360:CDS 30.0%
GATTCTAGGTCAAAGTTAAA+CGG - chr1_4:2277733-2277752 None:intergenic 30.0%
GTACTTCATTTATTATGACC+TGG + chr1_4:2277814-2277833 Msa0143360:intron 30.0%
!!! GAACAAACTGCTATTTTTTG+CGG - chr1_4:2278238-2278257 None:intergenic 30.0%
TATTTAACAACACTGGGTTA+TGG + chr1_4:2278358-2278377 Msa0143360:intron 30.0%
TTATCTTAAGGAATTGTGCA+TGG + chr1_4:2278721-2278740 Msa0143360:intron 30.0%
TATCTTAAGGAATTGTGCAT+GGG + chr1_4:2278722-2278741 Msa0143360:intron 30.0%
TATGGTACTCTCATTTGTAT+CGG + chr1_4:2278928-2278947 Msa0143360:intron 30.0%
AATAACAGCCATACTTGTAT+TGG - chr1_4:2279023-2279042 None:intergenic 30.0%
GTTAGAAAATCTTTCGATGT+GGG - chr1_4:2279400-2279419 None:intergenic 30.0%
TGTTAGAAAATCTTTCGATG+TGG - chr1_4:2279401-2279420 None:intergenic 30.0%
AGTACACTAAAATGAAAGAG+TGG + chr1_4:2279501-2279520 Msa0143360:intron 30.0%
GTACACTAAAATGAAAGAGT+GGG + chr1_4:2279502-2279521 Msa0143360:intron 30.0%
!! CATAATTCGTTGACTTTCTA+GGG - chr1_4:2279732-2279751 None:intergenic 30.0%
!! ACATAATTCGTTGACTTTCT+AGG - chr1_4:2279733-2279752 None:intergenic 30.0%
CATTTCATAAAAATACCCGT+AGG - chr1_4:2279920-2279939 None:intergenic 30.0%
TATCCCATGAAAAATGTAAG+GGG - chr1_4:2280163-2280182 None:intergenic 30.0%
CTATCCCATGAAAAATGTAA+GGG - chr1_4:2280164-2280183 None:intergenic 30.0%
TCTATCCCATGAAAAATGTA+AGG - chr1_4:2280165-2280184 None:intergenic 30.0%
ACAAATAGATCACCAAAGAA+AGG - chr1_4:2280211-2280230 None:intergenic 30.0%
! TTTCTTTGGTGATCTATTTG+TGG + chr1_4:2280210-2280229 Msa0143360:intron 30.0%
! TTCTTTGGTGATCTATTTGT+GGG + chr1_4:2280211-2280230 Msa0143360:intron 30.0%
TAAAGTAAAAAAGCTCAGAG+TGG - chr1_4:2280313-2280332 None:intergenic 30.0%
! GGCTGATGGAAAATTTTATA+GGG - chr1_4:2280456-2280475 None:intergenic 30.0%
! AGGCTGATGGAAAATTTTAT+AGG - chr1_4:2280457-2280476 None:intergenic 30.0%
! TGCTAACGGAAAATTTTACA+AGG - chr1_4:2280487-2280506 None:intergenic 30.0%
ACGAAAGTTTGGATATCTAT+AGG + chr1_4:2280568-2280587 Msa0143360:intron 30.0%
CGAAAGTTTGGATATCTATA+GGG + chr1_4:2280569-2280588 Msa0143360:intron 30.0%
TGGAAGAAATAGAGTACATT+GGG + chr1_4:2280713-2280732 Msa0143360:intron 30.0%
CTAAAAAGTTGTATTGGAAG+AGG + chr1_4:2280795-2280814 Msa0143360:intron 30.0%
TTTGTAGTTGTACATATAGC+CGG - chr1_4:2281226-2281245 None:intergenic 30.0%
TATGTACAACTACAAAGTAC+AGG + chr1_4:2281230-2281249 Msa0143360:intron 30.0%
TCCACTAAATGCTAATTGAA+AGG + chr1_4:2281670-2281689 Msa0143360:intron 30.0%
TTTCCTTGTAATGAAGACAT+TGG + chr1_4:2281755-2281774 Msa0143360:intron 30.0%
ATACCAATGTCTTCATTACA+AGG - chr1_4:2281761-2281780 None:intergenic 30.0%
! TAATAATGCTTTGAACCATG+TGG + chr1_4:2281897-2281916 Msa0143360:intron 30.0%
!!! TTGGCATATGTGTTGATTTT+TGG - chr1_4:2281931-2281950 None:intergenic 30.0%
!! CAGTACATCATCTCTAAAAT+TGG - chr1_4:2281950-2281969 None:intergenic 30.0%
CTATAATGCTGTTCAGATTA+TGG + chr1_4:2281990-2282009 Msa0143360:CDS 30.0%
TAGCATAGTAAGAATGTTCT+TGG - chr1_4:2282020-2282039 None:intergenic 30.0%
!! ATTCTTACTATGCTAGCTTT+GGG + chr1_4:2282025-2282044 Msa0143360:CDS 30.0%
TGTTATTCTTTGAATCGCAT+TGG - chr1_4:2282124-2282143 None:intergenic 30.0%
AATGCGATTCAAAGAATAAC+AGG + chr1_4:2282123-2282142 Msa0143360:intron 30.0%
GTGCAAAGAAATTAGTAACA+TGG - chr1_4:2282249-2282268 None:intergenic 30.0%
! TTCTGATGGATATTGTACAT+AGG + chr1_4:2282341-2282360 Msa0143360:CDS 30.0%
GTATGAGATGTTTAATTGCT+TGG - chr1_4:2282480-2282499 None:intergenic 30.0%
CCTGTAAATATTTCTCTGTT+GGG - chr1_4:2282679-2282698 None:intergenic 30.0%
CCAACAGAGAAATATTTACA+GGG + chr1_4:2282677-2282696 Msa0143360:intron 30.0%
ATAATTAGAGTAGAGAGGAT+AGG + chr1_4:2282714-2282733 Msa0143360:intron 30.0%
TAATTAACAAGTTCTACACC+AGG + chr1_4:2282793-2282812 Msa0143360:intron 30.0%
TTGTGAAGATTTATTCTAGG+AGG - chr1_4:2282844-2282863 None:intergenic 30.0%
CGATTGTGAAGATTTATTCT+AGG - chr1_4:2282847-2282866 None:intergenic 30.0%
ATAGTGCAAGATCTTATTGA+TGG + chr1_4:2282936-2282955 Msa0143360:intron 30.0%
!! ATTATTTCCATTCTGGTTCA+CGG + chr1_4:2283063-2283082 Msa0143360:CDS 30.0%
TAACAATGTCAATGAACTCT+GGG - chr1_4:2283152-2283171 None:intergenic 30.0%
ATAACAATGTCAATGAACTC+TGG - chr1_4:2283153-2283172 None:intergenic 30.0%
CATTTGAAAGTAGATACCTT+AGG - chr1_4:2283245-2283264 None:intergenic 30.0%
ATCTACTTTCAAATGCTAGA+TGG + chr1_4:2283250-2283269 Msa0143360:CDS 30.0%
CTGGATGAATATAAGTTTGA+TGG + chr1_4:2283276-2283295 Msa0143360:CDS 30.0%
! GTGTCTGGTCTTTAAATTTA+TGG + chr1_4:2283371-2283390 Msa0143360:intron 30.0%
!! TATGGTATTCTAAGATAACC+TGG + chr1_4:2283389-2283408 Msa0143360:intron 30.0%
!! TGGGTAACCTTATTGTTTTA+TGG + chr1_4:2283518-2283537 Msa0143360:intron 30.0%
AACAGGACCATAAAACAATA+AGG - chr1_4:2283528-2283547 None:intergenic 30.0%
AAGAACGTAAGAAAACAAAC+AGG - chr1_4:2283545-2283564 None:intergenic 30.0%
!! ATGATAGTTTTACAGCTTGA+TGG + chr1_4:2283645-2283664 Msa0143360:intron 30.0%
!! TGATAGTTTTACAGCTTGAT+GGG + chr1_4:2283646-2283665 Msa0143360:intron 30.0%
! AAAATTGTTCAATAGTGGAG+TGG + chr1_4:2283720-2283739 Msa0143360:intron 30.0%
AACTGTTAAGAAAGATCAAG+AGG + chr1_4:2283910-2283929 Msa0143360:intron 30.0%
TAGCATTCAATAATCCTGAT+TGG - chr1_4:2283993-2284012 None:intergenic 30.0%
CTTGTTAATGATCTCATTCA+TGG + chr1_4:2284411-2284430 Msa0143360:CDS 30.0%
! ACAATTTTCTTTCCATTTCC+AGG + chr1_4:2284636-2284655 Msa0143360:intron 30.0%
AAACTACAAACTATGCAAGA+AGG - chr1_4:2285250-2285269 None:intergenic 30.0%
TTATATATGTTCAAAAGGGG+AGG + chr1_4:2285451-2285470 Msa0143360:intron 30.0%
TAAGCAAATCAGATATAGCA+TGG + chr1_4:2285632-2285651 Msa0143360:intron 30.0%
AAGCAAATCAGATATAGCAT+GGG + chr1_4:2285633-2285652 Msa0143360:intron 30.0%
AACATAACCTCCAAAGTTTA+AGG + chr1_4:2285748-2285767 Msa0143360:intron 30.0%
TACAGAAAATGTTGTATCTC+CGG - chr1_4:2285877-2285896 None:intergenic 30.0%
AAAAAGACATAATTCGATGC+AGG - chr1_4:2285927-2285946 None:intergenic 30.0%
AAACGATATGGCTGAAATTA+CGG - chr1_4:2285999-2286018 None:intergenic 30.0%
!!! AGCCATATCGTTTTTTATGT+AGG + chr1_4:2286006-2286025 Msa0143360:intron 30.0%
GTAGGAAAAAAGATGAAGAT+TGG + chr1_4:2286024-2286043 Msa0143360:intron 30.0%
AAAAGATGAAGATTGGAGAA+TGG + chr1_4:2286031-2286050 Msa0143360:CDS 30.0%
AAAGATGAAGATTGGAGAAT+GGG + chr1_4:2286032-2286051 Msa0143360:CDS 30.0%
TATGCTAGAAGAACTTATTC+TGG + chr1_4:2286207-2286226 Msa0143360:intron 30.0%
CTTGACTTCTATAAATCTTG+TGG + chr1_4:2286319-2286338 Msa0143360:intron 30.0%
ACACTCATTTACATACTTAG+AGG - chr1_4:2286372-2286391 None:intergenic 30.0%
! AAATGAGTGTTGTTGAACTT+AGG + chr1_4:2286382-2286401 Msa0143360:intron 30.0%
TAGCTTCTGTGAAATCATTA+AGG + chr1_4:2286449-2286468 Msa0143360:intron 30.0%
! TAATTGCTGTAGTTTGTCAT+TGG + chr1_4:2286497-2286516 Msa0143360:intron 30.0%
! ACATTTTACTTATGCTCTGT+TGG + chr1_4:2286526-2286545 Msa0143360:intron 30.0%
TTGACAATTTGAGAAGTTGT+TGG + chr1_4:2286760-2286779 Msa0143360:intron 30.0%
TATTATTGTTCTGTTCAGAG+TGG + chr1_4:2286825-2286844 Msa0143360:intron 30.0%
ACAACAGTTATGATAAATGC+AGG + chr1_4:2286906-2286925 Msa0143360:CDS 30.0%
! ACATTTTTCCGATCCTTATT+CGG + chr1_4:2287145-2287164 Msa0143360:intron 30.0%
!! ATCAAACAAAAGTGTCTCAA+AGG + chr1_4:2287187-2287206 Msa0143360:intron 30.0%
AAAACCTATTACACATTCTC+TGG - chr1_4:2287215-2287234 None:intergenic 30.0%
AATTAAGTCAATATTCTCCC+TGG + chr1_4:2287251-2287270 Msa0143360:intron 30.0%
ACAGTTACATGCATGTTAAA+TGG - chr1_4:2287277-2287296 None:intergenic 30.0%
AAGGGATTGGGTTATATAAA+GGG - chr1_4:2287306-2287325 None:intergenic 30.0%
TAAGGGATTGGGTTATATAA+AGG - chr1_4:2287307-2287326 None:intergenic 30.0%
TGAGATGAGAAATGTGTTAT+TGG - chr1_4:2287430-2287449 None:intergenic 30.0%
ACACATTTCTCATCTCAATT+TGG + chr1_4:2287433-2287452 Msa0143360:intron 30.0%
CACATTTCTCATCTCAATTT+GGG + chr1_4:2287434-2287453 Msa0143360:intron 30.0%
! TTAAAAACCAGATTTGGAAC+TGG - chr1_4:2287484-2287503 None:intergenic 30.0%
!! TAGTGCTATTTGATAGTTAG+TGG + chr1_4:2287613-2287632 Msa0143360:intron 30.0%
ATAGAAATCTGACATAGTCT+TGG - chr1_4:2287918-2287937 None:intergenic 30.0%
TTGGGTTATTGTCTTACATA+CGG - chr1_4:2288111-2288130 None:intergenic 30.0%
AAATACCCATCCGTTTAAAA+TGG + chr1_4:2288133-2288152 Msa0143360:intron 30.0%
! GTAAACCAGTCCATTTTAAA+CGG - chr1_4:2288146-2288165 None:intergenic 30.0%
!!! AACCTGATTTTGTTTTGACA+TGG + chr1_4:2288182-2288201 Msa0143360:intron 30.0%
ATCCATGTCAAAACAAAATC+AGG - chr1_4:2288187-2288206 None:intergenic 30.0%
GGATATGTAACCGTTTAAAA+TGG + chr1_4:2288203-2288222 Msa0143360:intron 30.0%
!! CTTTTTGGTGTAAAATGTCA+GGG - chr1_4:2288237-2288256 None:intergenic 30.0%
!! TCTTTTTGGTGTAAAATGTC+AGG - chr1_4:2288238-2288257 None:intergenic 30.0%
AATCATATTCAGAAAGACGA+AGG - chr1_4:2288310-2288329 None:intergenic 30.0%
TTTGCTTATTCTCAACAGAA+AGG - chr1_4:2288409-2288428 None:intergenic 30.0%
AAACTATAGCACATATGACT+AGG + chr1_4:2288626-2288645 Msa0143360:intron 30.0%
!! AACTATTAAACTCTGAAGCA+TGG + chr1_4:2288896-2288915 Msa0143360:intron 30.0%
!! ACTATTAAACTCTGAAGCAT+GGG + chr1_4:2288897-2288916 Msa0143360:intron 30.0%
AAACTATAGCACATATGACT+AGG + chr1_4:2288626-2288645 Msa0143360:intron 30.0%
!! AACTATTAAACTCTGAAGCA+TGG + chr1_4:2288896-2288915 Msa0143360:intron 30.0%
!! ACTATTAAACTCTGAAGCAT+GGG + chr1_4:2288897-2288916 Msa0143360:intron 30.0%
AAGTAAAAATAGGTACGGTT+CGG - chr1_4:2289307-2289326 None:intergenic 30.0%
TTTGTGCAACAAAAACGTAA+GGG + chr1_4:2289343-2289362 Msa0143360:intron 30.0%
! GCTTTTGATGAAAATAGTAG+AGG + chr1_4:2289393-2289412 Msa0143360:intron 30.0%
CGGCAAATTTGAAAAAATGA+AGG - chr1_4:2289521-2289540 None:intergenic 30.0%
GTTTAATAGCTATGATGCAT+AGG - chr1_4:2289583-2289602 None:intergenic 30.0%
ATAAGCCATCAGAATTTCTA+AGG + chr1_4:2289661-2289680 Msa0143360:intron 30.0%
! GCAGAATATCTAAGATATCA+TGG + chr1_4:2289772-2289791 Msa0143360:CDS 30.0%
TTACACCATATCTTTCTTCT+AGG - chr1_4:2289828-2289847 None:intergenic 30.0%
CATTTGTGAGAAAAAAACCT+AGG - chr1_4:2290087-2290106 None:intergenic 30.0%
! TTTTCTCACAAATGAGATAG+GGG + chr1_4:2290093-2290112 Msa0143360:intron 30.0%
ACAGAGTTATAATCTTCGAA+AGG + chr1_4:2290232-2290251 Msa0143360:CDS 30.0%
CAGAGTTATAATCTTCGAAA+GGG + chr1_4:2290233-2290252 Msa0143360:CDS 30.0%
GAAAATTGAATACAAAGACC+AGG - chr1_4:2290263-2290282 None:intergenic 30.0%
! TTTAAAGCCAGGGAAATATA+AGG + chr1_4:2290320-2290339 Msa0143360:CDS 30.0%
! GATTAAAATTGGTTCACTTG+AGG - chr1_4:2290539-2290558 None:intergenic 30.0%
TATGTTTAACCTCTTATTGG+TGG + chr1_4:2290727-2290746 Msa0143360:intron 30.0%
!! AAGTGACACTCATTTTGAAA+CGG - chr1_4:2290948-2290967 None:intergenic 30.0%
GAAAATTGTGAGAGAAAAGT+TGG - chr1_4:2291053-2291072 None:intergenic 30.0%
!! AAAGAGTTTGTTAATTCCAC+CGG - chr1_4:2291263-2291282 None:intergenic 30.0%
! ATTCTCTTGGATGATTTTAC+AGG + chr1_4:2291285-2291304 Msa0143360:intron 30.0%
CTTATCAAAGAATTGTCATC+AGG - chr1_4:2291467-2291486 None:intergenic 30.0%
CATTATTATGTGCACAGAAA+CGG - chr1_4:2291795-2291814 None:intergenic 30.0%
GAACGGAGATATCATATATA+AGG - chr1_4:2291871-2291890 None:intergenic 30.0%
AATAGTTGCCTTAGTCTAAA+TGG + chr1_4:2291952-2291971 Msa0143360:three_prime_UTR 30.0%
ATTGAAATTATGCACTCAAC+TGG - chr1_4:2292123-2292142 None:intergenic 30.0%
TTGAGTTTAGCATGGTGATT+GGG - chr1_4:2272074-2272093 None:intergenic 35.0%
GATTAATGTACGGTGAAGAA+TGG - chr1_4:2272150-2272169 None:intergenic 35.0%
TCTTCTATTCTACCAGCTTA+GGG - chr1_4:2272358-2272377 None:intergenic 35.0%
TTCTTCTATTCTACCAGCTT+AGG - chr1_4:2272359-2272378 None:intergenic 35.0%
TTATTCAGAGAAGGAACAAC+GGG - chr1_4:2272413-2272432 None:intergenic 35.0%
CTTATTCAGAGAAGGAACAA+CGG - chr1_4:2272414-2272433 None:intergenic 35.0%
GGAATTCTTCTTGAGAAAGA+AGG - chr1_4:2272480-2272499 None:intergenic 35.0%
TTCATTACTCGAGAATGATG+AGG - chr1_4:2272501-2272520 None:intergenic 35.0%
ACGCATTAAGACAAAAAACG+AGG - chr1_4:2272528-2272547 None:intergenic 35.0%
CGAAGCTCAATTGTGAAATT+TGG + chr1_4:2272652-2272671 Msa0143360:intron 35.0%
TTGATGCTGTTGAATTGACT+AGG + chr1_4:2272766-2272785 Msa0143360:intron 35.0%
GAAACTGAACTATGAGATTC+TGG + chr1_4:2272825-2272844 Msa0143360:intron 35.0%
!!! TTTTTTGAGCTCAAGGACTT+TGG + chr1_4:2272868-2272887 Msa0143360:intron 35.0%
!! GTTCTGAGTTTGTTATGGAT+TGG + chr1_4:2272911-2272930 Msa0143360:intron 35.0%
!! GGTGCTGAATTTTAAATGCT+CGG - chr1_4:2272977-2272996 None:intergenic 35.0%
TTGGCTATGAATGAATGAGT+TGG + chr1_4:2273088-2273107 Msa0143360:intron 35.0%
TGGCTATGAATGAATGAGTT+GGG + chr1_4:2273089-2273108 Msa0143360:intron 35.0%
GTCTGCGATTTGATATTGAA+AGG + chr1_4:2273229-2273248 Msa0143360:intron 35.0%
TTCAGCAATTGTGGAAGATT+TGG - chr1_4:2273518-2273537 None:intergenic 35.0%
AAATCCTGATATAACCTCAG+AGG + chr1_4:2273600-2273619 Msa0143360:CDS 35.0%
TGAATACTACAATCCCTATG+AGG - chr1_4:2273705-2273724 None:intergenic 35.0%
GGGATTGTAGTATTCATTTG+AGG + chr1_4:2273709-2273728 Msa0143360:intron 35.0%
GAGGAATTTATGAAACTGTG+AGG + chr1_4:2273728-2273747 Msa0143360:intron 35.0%
! ATTCTGAAGATGCCTAAGTT+GGG - chr1_4:2274083-2274102 None:intergenic 35.0%
! TATTCTGAAGATGCCTAAGT+TGG - chr1_4:2274084-2274103 None:intergenic 35.0%
AGAAGAAGGTTGTCACAAAA+TGG + chr1_4:2274260-2274279 Msa0143360:intron 35.0%
ACTATATAGCCATTGTGTGT+AGG + chr1_4:2274299-2274318 Msa0143360:intron 35.0%
AGCATGCCTATAAATGCATT+TGG + chr1_4:2274376-2274395 Msa0143360:intron 35.0%
!! TTAGTCTTTTCAGAACTTGG+AGG + chr1_4:2274506-2274525 Msa0143360:intron 35.0%
TGTTATGTCATCATCACTTG+TGG + chr1_4:2274611-2274630 Msa0143360:CDS 35.0%
! CTATATTGGAGTTAGCTTAC+CGG - chr1_4:2274791-2274810 None:intergenic 35.0%
AGTACTTGCTTCACCTATAT+TGG - chr1_4:2274805-2274824 None:intergenic 35.0%
!!! TGCAAAGTTTTGAATGTTGC+GGG + chr1_4:2274849-2274868 Msa0143360:intron 35.0%
TTTCATGCTGTTATATTGGG+GGG + chr1_4:2274903-2274922 Msa0143360:intron 35.0%
GTTAGCTAAGAGGTAATAGT+GGG + chr1_4:2274962-2274981 Msa0143360:intron 35.0%
AGAGTGTAGTTCATTACATG+TGG + chr1_4:2275076-2275095 Msa0143360:intron 35.0%
! AACATTGCTGCTATGCTTTT+TGG - chr1_4:2275210-2275229 None:intergenic 35.0%
CATTGCATGAGCTATGTAAT+TGG + chr1_4:2275265-2275284 Msa0143360:intron 35.0%
!!! TTCTGGATTTTGGATTGGTA+AGG - chr1_4:2275526-2275545 None:intergenic 35.0%
ACAGTACAAAAAAATTCGGG+AGG + chr1_4:2275724-2275743 Msa0143360:CDS 35.0%
GAGGAAATTGACAAGTATGA+AGG + chr1_4:2275743-2275762 Msa0143360:CDS 35.0%
GAAATTGACAAGTATGAAGG+TGG + chr1_4:2275746-2275765 Msa0143360:CDS 35.0%
! TCAAAGAACATGCTCTAGAT+TGG + chr1_4:2275945-2275964 Msa0143360:intron 35.0%
CTCTAGATTGGAAACATTCT+TGG + chr1_4:2275957-2275976 Msa0143360:intron 35.0%
!!! TTACCCTGTTTTTACACAAG+AGG - chr1_4:2276313-2276332 None:intergenic 35.0%
TCTTGTGTAAAAACAGGGTA+AGG + chr1_4:2276312-2276331 Msa0143360:intron 35.0%
GTATTATAAAAAGGGCAACC+CGG - chr1_4:2276403-2276422 None:intergenic 35.0%
CAAAGACCATATCAATCAAG+TGG - chr1_4:2276580-2276599 None:intergenic 35.0%
TTGAACACAAACTAGAACAG+GGG - chr1_4:2276699-2276718 None:intergenic 35.0%
CACAGATACAACACGAAATA+TGG + chr1_4:2276742-2276761 Msa0143360:intron 35.0%
ACTCATACAATCAGCGAAAT+GGG - chr1_4:2276874-2276893 None:intergenic 35.0%
AACTCATACAATCAGCGAAA+TGG - chr1_4:2276875-2276894 None:intergenic 35.0%
ATAACGTGTTGGACACTTAA+TGG - chr1_4:2276950-2276969 None:intergenic 35.0%
GAGTTCTCTTAGTAGCTTAA+AGG + chr1_4:2277112-2277131 Msa0143360:intron 35.0%
AAAGGCTCTTAGTAGCTTAA+AGG + chr1_4:2277130-2277149 Msa0143360:intron 35.0%
!! TGAACTTTGTCTTGTTTACG+TGG + chr1_4:2277166-2277185 Msa0143360:intron 35.0%
GAATTGAAAAAGGAAGCTGA+GGG - chr1_4:2277401-2277420 None:intergenic 35.0%
AGAATTGAAAAAGGAAGCTG+AGG - chr1_4:2277402-2277421 None:intergenic 35.0%
AACAAAACTCGGAGACAATA+TGG + chr1_4:2277439-2277458 Msa0143360:intron 35.0%
GCAACCATTCTGGATATTAT+CGG + chr1_4:2277549-2277568 Msa0143360:intron 35.0%
CTCAAACAAATACAGATTCC+AGG - chr1_4:2277835-2277854 None:intergenic 35.0%
! TGTTTGAGACCTATGATTCA+TGG + chr1_4:2277847-2277866 Msa0143360:intron 35.0%
TACATTCCTCCATGAATCAT+AGG - chr1_4:2277859-2277878 None:intergenic 35.0%
ACTTCTCTTAGCATTTGGTT+GGG - chr1_4:2277898-2277917 None:intergenic 35.0%
GTATGACTTCTCTTAGCATT+TGG - chr1_4:2277903-2277922 None:intergenic 35.0%
TACATCTATCCATCCATACA+GGG - chr1_4:2277925-2277944 None:intergenic 35.0%
TTACATCTATCCATCCATAC+AGG - chr1_4:2277926-2277945 None:intergenic 35.0%
!!! ATGCTCTTGTTTTGTCAAAC+AGG + chr1_4:2278037-2278056 Msa0143360:intron 35.0%
! TTTGTCAAACAGGACGATTT+TGG + chr1_4:2278047-2278066 Msa0143360:intron 35.0%
! TATAGCAATGTTGTCGATTG+CGG + chr1_4:2278211-2278230 Msa0143360:intron 35.0%
TCAAATTCCACTATGCAACA+TGG + chr1_4:2278256-2278275 Msa0143360:intron 35.0%
! TAGTACTGAATAGCGTATTG+CGG + chr1_4:2278305-2278324 Msa0143360:intron 35.0%
! AACCCAGTGTTGTTAAATAG+TGG - chr1_4:2278357-2278376 None:intergenic 35.0%
CATTCTTCTTGATACATGCA+AGG - chr1_4:2278551-2278570 None:intergenic 35.0%
CAGATAGTCCAATACAAGTA+TGG + chr1_4:2279012-2279031 Msa0143360:intron 35.0%
!!! TGGTTTTATGCATAGTCACA+CGG + chr1_4:2279166-2279185 Msa0143360:intron 35.0%
TTTCAAAGAATTCGGTACGT+GGG + chr1_4:2279240-2279259 Msa0143360:intron 35.0%
! GAGAATTCATGAGCGAATTT+TGG + chr1_4:2279652-2279671 Msa0143360:intron 35.0%
GTCAACGAATTATGTGACTA+TGG + chr1_4:2279738-2279757 Msa0143360:intron 35.0%
AATATGACAGCAATTTAGCC+AGG + chr1_4:2279855-2279874 Msa0143360:intron 35.0%
CAAGAAACGTTTGACATGTA+TGG - chr1_4:2279882-2279901 None:intergenic 35.0%
TTGGATCAAATTCTCTGTAC+AGG + chr1_4:2280017-2280036 Msa0143360:CDS 35.0%
CCATTATATGGAATTTCACC+AGG - chr1_4:2280045-2280064 None:intergenic 35.0%
CCTGGTGAAATTCCATATAA+TGG + chr1_4:2280042-2280061 Msa0143360:CDS 35.0%
ATTCTACATTTCTTCCATGC+AGG + chr1_4:2280095-2280114 Msa0143360:intron 35.0%
! TTTCCCCCTTACATTTTTCA+TGG + chr1_4:2280156-2280175 Msa0143360:intron 35.0%
! TTCCCCCTTACATTTTTCAT+GGG + chr1_4:2280157-2280176 Msa0143360:intron 35.0%
ATCCCATGAAAAATGTAAGG+GGG - chr1_4:2280162-2280181 None:intergenic 35.0%
! TCTTTGGTGATCTATTTGTG+GGG + chr1_4:2280212-2280231 Msa0143360:intron 35.0%
CAATGACATACACTACAATG+AGG + chr1_4:2280256-2280275 Msa0143360:intron 35.0%
! TGCTGACGCAAAATTTTACA+GGG - chr1_4:2280425-2280444 None:intergenic 35.0%
! TTGCTGACGCAAAATTTTAC+AGG - chr1_4:2280426-2280445 None:intergenic 35.0%
! TAGTCCTTGTAGCATTTTCA+GGG - chr1_4:2280518-2280537 None:intergenic 35.0%
! TTAGTCCTTGTAGCATTTTC+AGG - chr1_4:2280519-2280538 None:intergenic 35.0%
! ACTCGCAAACAAAGCATTAA+GGG - chr1_4:2280646-2280665 None:intergenic 35.0%
! AACTCGCAAACAAAGCATTA+AGG - chr1_4:2280647-2280666 None:intergenic 35.0%
!!! GAGAGTTTTGGAAAAAAGGA+AGG + chr1_4:2280684-2280703 Msa0143360:intron 35.0%
GTGGAAGAAATAGAGTACAT+TGG + chr1_4:2280712-2280731 Msa0143360:intron 35.0%
ATAACACAACTCTCCTCATT+TGG + chr1_4:2280768-2280787 Msa0143360:intron 35.0%
TAACACAACTCTCCTCATTT+GGG + chr1_4:2280769-2280788 Msa0143360:intron 35.0%
!!! ACTTTTTAGTTCCCCAAATG+AGG - chr1_4:2280784-2280803 None:intergenic 35.0%
GGGGAACTAAAAAGTTGTAT+TGG + chr1_4:2280789-2280808 Msa0143360:intron 35.0%
! TTGTATTGGAAGAGGGTTTT+GGG + chr1_4:2280803-2280822 Msa0143360:intron 35.0%
!!! GCAGCTTTGTCTAGTTTTTT+GGG - chr1_4:2281092-2281111 None:intergenic 35.0%
!!! TGCAGCTTTGTCTAGTTTTT+TGG - chr1_4:2281093-2281112 None:intergenic 35.0%
TTCCATAATGTTCTGCAATC+TGG - chr1_4:2281144-2281163 None:intergenic 35.0%
TCATGCACTATTGTGTTAAG+TGG + chr1_4:2281315-2281334 Msa0143360:intron 35.0%
TCATCAATGGCAAAATGTCA+AGG + chr1_4:2281494-2281513 Msa0143360:intron 35.0%
! AATGAACCATGATGTTGCTT+GGG - chr1_4:2281542-2281561 None:intergenic 35.0%
! TAGCATTTAGTGGAAGTGTA+AGG - chr1_4:2281664-2281683 None:intergenic 35.0%
GCCTTTCAATTAGCATTTAG+TGG - chr1_4:2281674-2281693 None:intergenic 35.0%
! TCAATGGAGTGTCTATTTAG+AGG + chr1_4:2281856-2281875 Msa0143360:intron 35.0%
! CATTCTTACTATGCTAGCTT+TGG + chr1_4:2282024-2282043 Msa0143360:CDS 35.0%
! ATTGGAACCATCAGCATTTT+GGG - chr1_4:2282106-2282125 None:intergenic 35.0%
! AAAGTCAGGCCATCAATTTT+AGG - chr1_4:2282198-2282217 None:intergenic 35.0%
ATCAGAGACTTAAGATCTTC+TGG - chr1_4:2282292-2282311 None:intergenic 35.0%
TTGACAAGCATGTAAGAACT+TGG + chr1_4:2282416-2282435 Msa0143360:intron 35.0%
CCCAACAGAGAAATATTTAC+AGG + chr1_4:2282676-2282695 Msa0143360:intron 35.0%
CCCTGTAAATATTTCTCTGT+TGG - chr1_4:2282680-2282699 None:intergenic 35.0%
AAGGGAAAGTAGTGTACATT+CGG - chr1_4:2282750-2282769 None:intergenic 35.0%
GCCCATATAAATTTGTGTGT+GGG + chr1_4:2282815-2282834 Msa0143360:intron 35.0%
GCCCACACACAAATTTATAT+GGG - chr1_4:2282819-2282838 None:intergenic 35.0%
AGCCCACACACAAATTTATA+TGG - chr1_4:2282820-2282839 None:intergenic 35.0%
! GTCATCAGATATTGGTAATC+AGG - chr1_4:2282982-2283001 None:intergenic 35.0%
CCAATGTATTACTTGATGCA+TGG - chr1_4:2283010-2283029 None:intergenic 35.0%
CCATGCATCAAGTAATACAT+TGG + chr1_4:2283007-2283026 Msa0143360:CDS 35.0%
GCATCAAGTAATACATTGGA+TGG + chr1_4:2283011-2283030 Msa0143360:CDS 35.0%
GATGCTCATTATTTCCATTC+TGG + chr1_4:2283056-2283075 Msa0143360:CDS 35.0%
!! TTATTTCCATTCTGGTTCAC+GGG + chr1_4:2283064-2283083 Msa0143360:CDS 35.0%
!! GATTCTCGCCTTTTTAACTA+TGG + chr1_4:2283104-2283123 Msa0143360:CDS 35.0%
!! CCTTTTTAACTATGGAAGCT+GGG + chr1_4:2283112-2283131 Msa0143360:CDS 35.0%
TACTTTCAAATGCTAGATGG+TGG + chr1_4:2283253-2283272 Msa0143360:CDS 35.0%
!! TTTGATGGGTTTCGATTTGA+TGG + chr1_4:2283291-2283310 Msa0143360:CDS 35.0%
TCAATGATGTACACTCATCA+TGG + chr1_4:2283321-2283340 Msa0143360:CDS 35.0%
!!! TTCTAGTTGGTTTTTGTGTC+TGG + chr1_4:2283356-2283375 Msa0143360:intron 35.0%
! GCATTCTTACTTGGTAATCA+TGG + chr1_4:2283414-2283433 Msa0143360:intron 35.0%
!!! TCAACCCTTTTTTCTTCACT+TGG - chr1_4:2283452-2283471 None:intergenic 35.0%
AGAGAGGAAAGAAGTAAAAG+AGG - chr1_4:2283586-2283605 None:intergenic 35.0%
TGAAGGAAGAAGATTTAGAG+AGG - chr1_4:2283602-2283621 None:intergenic 35.0%
TACATACATACACCAATGCA+TGG + chr1_4:2283675-2283694 Msa0143360:intron 35.0%
! AATAGTGGAGTGGACAATTT+AGG + chr1_4:2283730-2283749 Msa0143360:intron 35.0%
!! TTAAGTAGAGCACTGAAACA+AGG + chr1_4:2283787-2283806 Msa0143360:intron 35.0%
AGATCAAGAGGTTAATGAGT+TGG + chr1_4:2283922-2283941 Msa0143360:intron 35.0%
AAATCTGATTATCTGGGTTG+AGG - chr1_4:2284127-2284146 None:intergenic 35.0%
CCTCTCAAATCTGATTATCT+GGG - chr1_4:2284133-2284152 None:intergenic 35.0%
TCCTCTCAAATCTGATTATC+TGG - chr1_4:2284134-2284153 None:intergenic 35.0%
! ATGAGAACCCTTTTCTTCAA+AGG - chr1_4:2284240-2284259 None:intergenic 35.0%
TGAGATCATTAACAAGCATC+AGG - chr1_4:2284407-2284426 None:intergenic 35.0%
! TATCCTGAAGCTGTTTCAAT+TGG + chr1_4:2284438-2284457 Msa0143360:CDS 35.0%
AAACACCATACTATCAGGTA+AGG - chr1_4:2284573-2284592 None:intergenic 35.0%
TGTTCAAACACCATACTATC+AGG - chr1_4:2284578-2284597 None:intergenic 35.0%
CTTTAACTATCGCTTGCATA+TGG + chr1_4:2284708-2284727 Msa0143360:CDS 35.0%
AGTGCGAATACATCATATCA+TGG + chr1_4:2284785-2284804 Msa0143360:intron 35.0%
TTTCAAATAATCCTGTCCGT+GGG + chr1_4:2284812-2284831 Msa0143360:intron 35.0%
TGTAATCATAAGACATCCCA+CGG - chr1_4:2284831-2284850 None:intergenic 35.0%
!! CCATCTCTAGTCTTTCTTTT+GGG - chr1_4:2284975-2284994 None:intergenic 35.0%
CCAAAAGAAAGACTAGAGAT+GGG + chr1_4:2284973-2284992 Msa0143360:intron 35.0%
ATTTGATCCTTCATTGCCAT+TGG + chr1_4:2285005-2285024 Msa0143360:intron 35.0%
! CTAGGGTCTTTTATCATCTT+TGG + chr1_4:2285181-2285200 Msa0143360:intron 35.0%
! ACTGAAGTACTCTAACCTAA+AGG + chr1_4:2285311-2285330 Msa0143360:intron 35.0%
TGAACGTAATGTACTCCTTT+AGG - chr1_4:2285329-2285348 None:intergenic 35.0%
!!! TTACCCTGTTTTTTTACACG+AGG - chr1_4:2285528-2285547 None:intergenic 35.0%
GTACATTACACTAAAGTGGT+GGG + chr1_4:2285554-2285573 Msa0143360:intron 35.0%
!!! CAAGAGTTTTGAACGGATAT+AGG - chr1_4:2285976-2285995 None:intergenic 35.0%
!!! ATTACGGCAAGAGTTTTGAA+CGG - chr1_4:2285983-2286002 None:intergenic 35.0%
TCAGGATATGTATGACTTCA+TGG + chr1_4:2286554-2286573 Msa0143360:intron 35.0%
GTCAAATAAACTTACCAGGA+TGG - chr1_4:2286701-2286720 None:intergenic 35.0%
! TCATAACTGTTGTTATTCCC+AGG - chr1_4:2286899-2286918 None:intergenic 35.0%
!! GATTTGACTTGGTAAGTTTC+TGG + chr1_4:2286933-2286952 Msa0143360:intron 35.0%
!! ATATCCAACGTTTGTTGTCA+TGG + chr1_4:2286990-2287009 Msa0143360:intron 35.0%
!! TATCCAACGTTTGTTGTCAT+GGG + chr1_4:2286991-2287010 Msa0143360:intron 35.0%
TCAGTTAGTTGAGAACTACT+TGG + chr1_4:2287017-2287036 Msa0143360:intron 35.0%
TATATCCTCCGAATAAGGAT+CGG - chr1_4:2287156-2287175 None:intergenic 35.0%
TCCTTATTCGGAGGATATAA+TGG + chr1_4:2287157-2287176 Msa0143360:intron 35.0%
ACCATTATATCCTCCGAATA+AGG - chr1_4:2287161-2287180 None:intergenic 35.0%
GTCTTCAATAGTAAGGGATT+GGG - chr1_4:2287318-2287337 None:intergenic 35.0%
TGTCTTCAATAGTAAGGGAT+TGG - chr1_4:2287319-2287338 None:intergenic 35.0%
GCTATCAAATGGATATGGAT+AGG - chr1_4:2287383-2287402 None:intergenic 35.0%
AAGTGGCTATCAAATGGATA+TGG - chr1_4:2287388-2287407 None:intergenic 35.0%
! ATATCCATTTGATAGCCACT+TGG + chr1_4:2287387-2287406 Msa0143360:intron 35.0%
TAAAAATCCAATCCACCAAG+TGG - chr1_4:2287405-2287424 None:intergenic 35.0%
CATGTTGACATTCATTCTGA+TGG - chr1_4:2287539-2287558 None:intergenic 35.0%
GAATGAATGTCAACATGAAG+AGG + chr1_4:2287542-2287561 Msa0143360:intron 35.0%
CTTACTGCTATGAAAACAGA+TGG + chr1_4:2287636-2287655 Msa0143360:intron 35.0%
CTACTGTTAAGCTCAACAAA+AGG + chr1_4:2287663-2287682 Msa0143360:intron 35.0%
! TCTTTTGCAGCCATTTCAAA+GGG + chr1_4:2287750-2287769 Msa0143360:intron 35.0%
!!! CTTGGAATTTTTTGAAGCTC+AGG - chr1_4:2287900-2287919 None:intergenic 35.0%
AAACGGATGGGTATTTAGTT+GGG - chr1_4:2288129-2288148 None:intergenic 35.0%
TAAACGGATGGGTATTTAGT+TGG - chr1_4:2288130-2288149 None:intergenic 35.0%
!! CCATGCTGATTTGGTAATTT+AGG - chr1_4:2288487-2288506 None:intergenic 35.0%
CCTAAATTACCAAATCAGCA+TGG + chr1_4:2288484-2288503 Msa0143360:intron 35.0%
! CAATGAAATCCATGCTGATT+TGG - chr1_4:2288496-2288515 None:intergenic 35.0%
! TGCAGATGCATTTAAGTTTG+TGG + chr1_4:2288652-2288671 Msa0143360:intron 35.0%
GTGTCTGTAATTTAGATGAC+TGG + chr1_4:2288674-2288693 Msa0143360:intron 35.0%
! GCAACTTCATTTGAGTTTCA+TGG - chr1_4:2288729-2288748 None:intergenic 35.0%
TGTGCTATAGTTTCCATGTT+TGG - chr1_4:2288927-2288946 None:intergenic 35.0%
! TGCAGATGCATTTAAGTTTG+TGG + chr1_4:2288652-2288671 Msa0143360:intron 35.0%
GTGTCTGTAATTTAGATGAC+TGG + chr1_4:2288674-2288693 Msa0143360:intron 35.0%
! GCAACTTCATTTGAGTTTCA+TGG - chr1_4:2288729-2288748 None:intergenic 35.0%
GTTTGTGCAACAAAAACGTA+AGG + chr1_4:2289342-2289361 Msa0143360:intron 35.0%
ATAGCTATGATGCATAGGTA+CGG - chr1_4:2289578-2289597 None:intergenic 35.0%
AGAAGCCTTAGAAATTCTGA+TGG - chr1_4:2289669-2289688 None:intergenic 35.0%
!! TCAGAATTTCTAAGGCTTCT+AGG + chr1_4:2289669-2289688 Msa0143360:intron 35.0%
! TTACCAAGGCATTAGTTCAA+AGG + chr1_4:2289710-2289729 Msa0143360:intron 35.0%
ACTTCAAATGACAAGCAGAT+AGG - chr1_4:2289895-2289914 None:intergenic 35.0%
! AGAGATAACTTGTAGGAAGT+TGG + chr1_4:2289935-2289954 Msa0143360:intron 35.0%
TTGCAGATAGTATTCAACCT+AGG + chr1_4:2290067-2290086 Msa0143360:intron 35.0%
AAATTAAGTGTGCCTACCTT+TGG + chr1_4:2290158-2290177 Msa0143360:intron 35.0%
CTGAGCACCAATATATTTCA+AGG + chr1_4:2290196-2290215 Msa0143360:CDS 35.0%
GATAGTACCTTATATTTCCC+TGG - chr1_4:2290330-2290349 None:intergenic 35.0%
! ATCCAGGAAAGTGTGATATT+TGG + chr1_4:2290488-2290507 Msa0143360:intron 35.0%
ATCCAAATATCACACTTTCC+TGG - chr1_4:2290493-2290512 None:intergenic 35.0%
TCACTTGAGGGTTTAGTAAT+TGG - chr1_4:2290526-2290545 None:intergenic 35.0%
AGACAATCTGTGAAAAGGAA+AGG - chr1_4:2290759-2290778 None:intergenic 35.0%
! TTCCTTTTCACAGATTGTCT+TGG + chr1_4:2290759-2290778 Msa0143360:intron 35.0%
ATCCAAGACAATCTGTGAAA+AGG - chr1_4:2290764-2290783 None:intergenic 35.0%
TTGTGAAAATGTTCAAGGTG+TGG + chr1_4:2290874-2290893 Msa0143360:intron 35.0%
AAAAGTTGGAGAGGGTAAAT+TGG - chr1_4:2291039-2291058 None:intergenic 35.0%
!! AAGCGACACTCATTTTGAAA+CGG + chr1_4:2291181-2291200 Msa0143360:intron 35.0%
! TTTTTACATTCTTGGGGACA+TGG + chr1_4:2291217-2291236 Msa0143360:intron 35.0%
!! AAGAGTTTGTTAATTCCACC+GGG - chr1_4:2291262-2291281 None:intergenic 35.0%
GGTGGAATTAACAAACTCTT+TGG + chr1_4:2291262-2291281 Msa0143360:intron 35.0%
ACAAACTCTTTGGATTCTCT+TGG + chr1_4:2291272-2291291 Msa0143360:intron 35.0%
! TCTTGGATGATTTTACAGGA+AGG + chr1_4:2291289-2291308 Msa0143360:intron 35.0%
TGGTATATGCTCTTGTAGAT+GGG + chr1_4:2291368-2291387 Msa0143360:CDS 35.0%
AAAACTAGCCAACCAACTTA+TGG + chr1_4:2291523-2291542 Msa0143360:three_prime_UTR 35.0%
!! GTTAATCACCATAAGTTGGT+TGG - chr1_4:2291534-2291553 None:intergenic 35.0%
ACCAACTTATGGTGATTAAC+AGG + chr1_4:2291534-2291553 Msa0143360:three_prime_UTR 35.0%
TTTAACATGCACAAGTTGCA+TGG + chr1_4:2291719-2291738 Msa0143360:three_prime_UTR 35.0%
! ACCCTAGAAAATTTTGCTGA+AGG + chr1_4:2291845-2291864 Msa0143360:three_prime_UTR 35.0%
! GCCTTCAGCAAAATTTTCTA+GGG - chr1_4:2291849-2291868 None:intergenic 35.0%
TGAGTTTAGCATGGTGATTG+GGG - chr1_4:2272073-2272092 None:intergenic 40.0%
GTTGAGTTTAGCATGGTGAT+TGG - chr1_4:2272075-2272094 None:intergenic 40.0%
! AGAAGCGCGTTGTTTAAGAA+CGG - chr1_4:2272306-2272325 None:intergenic 40.0%
GCTGGTAGAATAGAAGAAGA+TGG + chr1_4:2272361-2272380 Msa0143360:exon 40.0%
GGGAAATCGAATTCCTGAAA+TGG - chr1_4:2272393-2272412 None:intergenic 40.0%
AAGCTGGACTTATTCAGAGA+AGG - chr1_4:2272422-2272441 None:intergenic 40.0%
TGCTGTTGAATTGACTAGGT+AGG + chr1_4:2272770-2272789 Msa0143360:intron 40.0%
TTGAATTGACTAGGTAGGAC+TGG + chr1_4:2272775-2272794 Msa0143360:intron 40.0%
!! TACGCGTTCTGAGTTTGTTA+TGG + chr1_4:2272906-2272925 Msa0143360:intron 40.0%
! ATGAGTTGGGAGAATGTTCT+TGG + chr1_4:2273102-2273121 Msa0143360:intron 40.0%
GCTGAGTTATCTTGATCTTC+AGG - chr1_4:2273559-2273578 None:intergenic 40.0%
GACATGCAACAAACAGCATA+TGG - chr1_4:2273677-2273696 None:intergenic 40.0%
TTGCATGTCTTTCACCTCAT+AGG + chr1_4:2273688-2273707 Msa0143360:intron 40.0%
TGCATGTCTTTCACCTCATA+GGG + chr1_4:2273689-2273708 Msa0143360:intron 40.0%
GTACAAATCTGCAGTGATGA+CGG - chr1_4:2273939-2273958 None:intergenic 40.0%
! ATAAGTTGCCACTGTTTTGC+TGG + chr1_4:2274101-2274120 Msa0143360:intron 40.0%
TATGACTACCAGCAAAACAG+TGG - chr1_4:2274112-2274131 None:intergenic 40.0%
TGAATGAACCGATGTCTTCT+TGG - chr1_4:2274658-2274677 None:intergenic 40.0%
! TATATTTTCTGTCCAGCACC+AGG - chr1_4:2274723-2274742 None:intergenic 40.0%
CGGTAAGCTAACTCCAATAT+AGG + chr1_4:2274789-2274808 Msa0143360:intron 40.0%
!!! GCAAAGTTTTGAATGTTGCG+GGG + chr1_4:2274850-2274869 Msa0143360:intron 40.0%
!! TAGCTTGTTGTATGTGCTCT+TGG + chr1_4:2274937-2274956 Msa0143360:intron 40.0%
! GGTTAGCTAAGAGGTAATAG+TGG + chr1_4:2274961-2274980 Msa0143360:intron 40.0%
GTAAAAGAAGTCCAAGACAG+CGG - chr1_4:2275010-2275029 None:intergenic 40.0%
AAGTGAAGTGAGCTACATGA+TGG - chr1_4:2275315-2275334 None:intergenic 40.0%
TCATGTAGCTCACTTCACTT+AGG + chr1_4:2275315-2275334 Msa0143360:intron 40.0%
! AAAAGGTGTATCGGAATTCC+TGG + chr1_4:2275433-2275452 Msa0143360:intron 40.0%
ATCGGAATTCCTGGTTATAG+TGG + chr1_4:2275442-2275461 Msa0143360:intron 40.0%
TCGGAATTCCTGGTTATAGT+GGG + chr1_4:2275443-2275462 Msa0143360:intron 40.0%
TTTCAGCGAAAATCAGGCTT+TGG - chr1_4:2275673-2275692 None:intergenic 40.0%
! GTCTTGATGCATTTTCTCGT+GGG + chr1_4:2275768-2275787 Msa0143360:CDS 40.0%
AACTTATGACACAGAAGGGA+GGG - chr1_4:2275862-2275881 None:intergenic 40.0%
TAACTTATGACACAGAAGGG+AGG - chr1_4:2275863-2275882 None:intergenic 40.0%
GAGCATGTTCTTTGATTGAC+CGG - chr1_4:2275940-2275959 None:intergenic 40.0%
CAGCATTAGTGCATTGTACA+AGG - chr1_4:2275989-2276008 None:intergenic 40.0%
CATATAATACTGCTCCACGA+GGG + chr1_4:2276216-2276235 Msa0143360:intron 40.0%
ATATAATACTGCTCCACGAG+GGG + chr1_4:2276217-2276236 Msa0143360:intron 40.0%
ACAGCCTCTTGTGTAAAAAC+AGG + chr1_4:2276306-2276325 Msa0143360:intron 40.0%
CAGCCTCTTGTGTAAAAACA+GGG + chr1_4:2276307-2276326 Msa0143360:intron 40.0%
CGTACAATACACCAAATGGT+GGG + chr1_4:2276338-2276357 Msa0143360:intron 40.0%
AGGCATTACTTACAGAGAGT+GGG + chr1_4:2276630-2276649 Msa0143360:CDS 40.0%
ATGAAGTATACCTTAGCTCC+AGG - chr1_4:2276658-2276677 None:intergenic 40.0%
ATCAAGTCCAGATCTACATG+AGG + chr1_4:2277333-2277352 Msa0143360:intron 40.0%
AATGTCTCCTCATGTAGATC+TGG - chr1_4:2277343-2277362 None:intergenic 40.0%
TATTTCCTCTGCAACCATTC+TGG + chr1_4:2277539-2277558 Msa0143360:intron 40.0%
AATATCCAGAATGGTTGCAG+AGG - chr1_4:2277547-2277566 None:intergenic 40.0%
GCAACCGATAATATCCAGAA+TGG - chr1_4:2277556-2277575 None:intergenic 40.0%
CAAATGCAGATGTAATGACC+CGG + chr1_4:2277621-2277640 Msa0143360:CDS 40.0%
AAATGCAGATGTAATGACCC+GGG + chr1_4:2277622-2277641 Msa0143360:CDS 40.0%
CTAGGTCAAAGTTAAACGGA+TGG - chr1_4:2277729-2277748 None:intergenic 40.0%
ATGAGTAGGACAGAACAAGA+GGG - chr1_4:2277768-2277787 None:intergenic 40.0%
AATGAGTAGGACAGAACAAG+AGG - chr1_4:2277769-2277788 None:intergenic 40.0%
TTGAGACCTATGATTCATGG+AGG + chr1_4:2277850-2277869 Msa0143360:intron 40.0%
GACTTCTCTTAGCATTTGGT+TGG - chr1_4:2277899-2277918 None:intergenic 40.0%
AAGAGAAGTCATACCCTGTA+TGG + chr1_4:2277909-2277928 Msa0143360:intron 40.0%
GTAAGGATGTCCAATATGCA+GGG - chr1_4:2277975-2277994 None:intergenic 40.0%
AGTAAGGATGTCCAATATGC+AGG - chr1_4:2277976-2277995 None:intergenic 40.0%
TTCTTGCCAAATAATGCCGA+TGG + chr1_4:2278083-2278102 Msa0143360:CDS 40.0%
! CCAGTGTTGTTAAATAGTGG+CGG - chr1_4:2278354-2278373 None:intergenic 40.0%
CGCCACTATTTAACAACACT+GGG + chr1_4:2278352-2278371 Msa0143360:intron 40.0%
GTGGAACCAGTTCACATATT+TGG - chr1_4:2278467-2278486 None:intergenic 40.0%
! GCGTGGTTTGCAAAAAAGTA+TGG - chr1_4:2279055-2279074 None:intergenic 40.0%
AATCTCCTTCAAAACTAGCG+TGG - chr1_4:2279072-2279091 None:intergenic 40.0%
!!! ACGCTAGTTTTGAAGGAGAT+TGG + chr1_4:2279071-2279090 Msa0143360:intron 40.0%
CTTTCAAAGAATTCGGTACG+TGG + chr1_4:2279239-2279258 Msa0143360:intron 40.0%
TTCAAAGAATTCGGTACGTG+GGG + chr1_4:2279241-2279260 Msa0143360:intron 40.0%
TATACATAGCCGGTACGTTA+TGG + chr1_4:2279266-2279285 Msa0143360:intron 40.0%
ATACATAGCCGGTACGTTAT+GGG + chr1_4:2279267-2279286 Msa0143360:intron 40.0%
TCTTTCCTACCTAAGGAAGA+TGG + chr1_4:2279309-2279328 Msa0143360:intron 40.0%
TTAGTGTACTGCAGTACACA+TGG - chr1_4:2279491-2279510 None:intergenic 40.0%
TCAAAAAATCCAAACGCCAC+TGG - chr1_4:2279528-2279547 None:intergenic 40.0%
GTTGTCTTGAACTAAGCCTA+CGG + chr1_4:2279901-2279920 Msa0143360:intron 40.0%
TTGTCTTGAACTAAGCCTAC+GGG + chr1_4:2279902-2279921 Msa0143360:intron 40.0%
ATTGAGTCCTTGATTCCAGA+GGG - chr1_4:2279991-2280010 None:intergenic 40.0%
AATTGAGTCCTTGATTCCAG+AGG - chr1_4:2279992-2280011 None:intergenic 40.0%
ACAGAGAATTTGATCCAAGC+AGG - chr1_4:2280015-2280034 None:intergenic 40.0%
AATATACTATGATCCCCCAG+AGG + chr1_4:2280065-2280084 Msa0143360:CDS 40.0%
TGTAGAATCTTACCTCCTCT+GGG - chr1_4:2280083-2280102 None:intergenic 40.0%
ATGTAGAATCTTACCTCCTC+TGG - chr1_4:2280084-2280103 None:intergenic 40.0%
! TTTTCTATGCTTAGCCTGCA+TGG - chr1_4:2280112-2280131 None:intergenic 40.0%
! CTTTGGTGATCTATTTGTGG+GGG + chr1_4:2280213-2280232 Msa0143360:intron 40.0%
ATCTATTTGTGGGGGTTTCA+AGG + chr1_4:2280221-2280240 Msa0143360:intron 40.0%
TCTATTTGTGGGGGTTTCAA+GGG + chr1_4:2280222-2280241 Msa0143360:intron 40.0%
ACAAGGACTAAAAAGGCTGA+TGG - chr1_4:2280470-2280489 None:intergenic 40.0%
TCAGGGACCAAAAATGCTAA+CGG - chr1_4:2280501-2280520 None:intergenic 40.0%
AGGGACTAGAAACGAAAGTT+TGG + chr1_4:2280557-2280576 Msa0143360:intron 40.0%
! CTCGCAAACAAAGCATTAAG+GGG - chr1_4:2280645-2280664 None:intergenic 40.0%
!! TGCTTTGTTTGCGAGTTTAG+AGG + chr1_4:2280650-2280669 Msa0143360:intron 40.0%
!! GCTTTGTTTGCGAGTTTAGA+GGG + chr1_4:2280651-2280670 Msa0143360:intron 40.0%
! CTTTGTTTGCGAGTTTAGAG+GGG + chr1_4:2280652-2280671 Msa0143360:intron 40.0%
!!! AGGGGAGAGTTTTGGAAAAA+AGG + chr1_4:2280680-2280699 Msa0143360:intron 40.0%
GAAATAGAGTACATTGGGAG+AGG + chr1_4:2280718-2280737 Msa0143360:intron 40.0%
AACACAACTCTCCTCATTTG+GGG + chr1_4:2280770-2280789 Msa0143360:intron 40.0%
! GTTGTATTGGAAGAGGGTTT+TGG + chr1_4:2280802-2280821 Msa0143360:intron 40.0%
! TGTATTGGAAGAGGGTTTTG+GGG + chr1_4:2280804-2280823 Msa0143360:intron 40.0%
! GTGGGAAGTATAGAGAGAAA+TGG - chr1_4:2280970-2280989 None:intergenic 40.0%
!! TTAGGCTTTGTTTGGGAGTT+TGG - chr1_4:2281021-2281040 None:intergenic 40.0%
TGCCAGATTGCAGAACATTA+TGG + chr1_4:2281139-2281158 Msa0143360:intron 40.0%
AACTACAAAGTACAGGCCTT+AGG + chr1_4:2281237-2281256 Msa0143360:intron 40.0%
CTAATTGATTGTGGTCGCTT+TGG - chr1_4:2281391-2281410 None:intergenic 40.0%
CAAAGCGACCACAATCAATT+AGG + chr1_4:2281389-2281408 Msa0143360:CDS 40.0%
! AGAGAGTATAAAGTACGCAC+CGG - chr1_4:2281445-2281464 None:intergenic 40.0%
CAATGAACCATGATGTTGCT+TGG - chr1_4:2281543-2281562 None:intergenic 40.0%
! TAGCCAAGCTTTTTAATGCG+AGG - chr1_4:2281973-2281992 None:intergenic 40.0%
!!! AACCATCAGCATTTTGGGAT+GGG - chr1_4:2282101-2282120 None:intergenic 40.0%
! CATTGGAACCATCAGCATTT+TGG - chr1_4:2282107-2282126 None:intergenic 40.0%
TGTCTCCCTCCTAAAATTGA+TGG + chr1_4:2282186-2282205 Msa0143360:intron 40.0%
!! TCAGGCCATCAATTTTAGGA+GGG - chr1_4:2282194-2282213 None:intergenic 40.0%
AATATTGTTCTGCGTGATGC+AGG + chr1_4:2282221-2282240 Msa0143360:intron 40.0%
ATTTCTTTGCACCTAGCAGT+CGG + chr1_4:2282257-2282276 Msa0143360:CDS 40.0%
CAATATCCATCAGAACAAGC+AGG - chr1_4:2282336-2282355 None:intergenic 40.0%
!!! CCTTGACAGCTAGCTTTTAA+GGG - chr1_4:2282449-2282468 None:intergenic 40.0%
CCTTAAAAGCTAGCTGTCAA+GGG + chr1_4:2282447-2282466 Msa0143360:intron 40.0%
CTTAAAAGCTAGCTGTCAAG+GGG + chr1_4:2282448-2282467 Msa0143360:intron 40.0%
TTAAAAGCTAGCTGTCAAGG+GGG + chr1_4:2282449-2282468 Msa0143360:intron 40.0%
ACATCTCATACTACTCGATG+TGG + chr1_4:2282489-2282508 Msa0143360:intron 40.0%
CATCTCATACTACTCGATGT+GGG + chr1_4:2282490-2282509 Msa0143360:intron 40.0%
AAAGAAGGGCTACATATGGA+GGG - chr1_4:2282622-2282641 None:intergenic 40.0%
TTGGAAAGAAGGGCTACATA+TGG - chr1_4:2282626-2282645 None:intergenic 40.0%
GAGTAGAGAGGATAGGAAAA+TGG + chr1_4:2282721-2282740 Msa0143360:intron 40.0%
CACACAAATTTATATGGGCC+TGG - chr1_4:2282814-2282833 None:intergenic 40.0%
GGCCCATATAAATTTGTGTG+TGG + chr1_4:2282814-2282833 Msa0143360:intron 40.0%
TGGCTACAGTCATCAGATAT+TGG - chr1_4:2282990-2283009 None:intergenic 40.0%
CAGTTCCATCAAACATGTTG+AGG - chr1_4:2283037-2283056 None:intergenic 40.0%
!! TATTTCCATTCTGGTTCACG+GGG + chr1_4:2283065-2283084 Msa0143360:CDS 40.0%
!! GCCTTTTTAACTATGGAAGC+TGG + chr1_4:2283111-2283130 Msa0143360:CDS 40.0%
CCCAGCTTCCATAGTTAAAA+AGG - chr1_4:2283115-2283134 None:intergenic 40.0%
ATGATTCTTCTATGCCCTTC+TGG + chr1_4:2283190-2283209 Msa0143360:intron 40.0%
TAAGTCACTATCGACCAGAA+GGG - chr1_4:2283207-2283226 None:intergenic 40.0%
ATAAGTCACTATCGACCAGA+AGG - chr1_4:2283208-2283227 None:intergenic 40.0%
TCAGAACAGTGCAGAGAATT+GGG + chr1_4:2283499-2283518 Msa0143360:intron 40.0%
GAGGAAAGAAGTAAAAGAGG+AGG - chr1_4:2283583-2283602 None:intergenic 40.0%
ATGAATAGGAGAACAAAGGG+AGG + chr1_4:2283855-2283874 Msa0143360:intron 40.0%
AAAGGACAATAGCACCAATC+AGG + chr1_4:2283976-2283995 Msa0143360:intron 40.0%
CCCAGATAATCAGATTTGAG+AGG + chr1_4:2284130-2284149 Msa0143360:intron 40.0%
! CGGTTGTCCTTTGAAGAAAA+GGG + chr1_4:2284230-2284249 Msa0143360:intron 40.0%
AGTAAAAGATACCTGCAGCA+AGG - chr1_4:2284331-2284350 None:intergenic 40.0%
! TTGCTGCAGGTATCTTTTAC+TGG + chr1_4:2284330-2284349 Msa0143360:intron 40.0%
TCACCAATTGAAACAGCTTC+AGG - chr1_4:2284444-2284463 None:intergenic 40.0%
TCCATCCTTACCTGATAGTA+TGG + chr1_4:2284565-2284584 Msa0143360:intron 40.0%
ACCATACTATCAGGTAAGGA+TGG - chr1_4:2284569-2284588 None:intergenic 40.0%
AAGAAGCTCAATCCACTTGT+CGG - chr1_4:2284740-2284759 None:intergenic 40.0%
CTTTCAAATAATCCTGTCCG+TGG + chr1_4:2284811-2284830 Msa0143360:intron 40.0%
CCCAAAAGAAAGACTAGAGA+TGG + chr1_4:2284972-2284991 Msa0143360:intron 40.0%
!! CCCATCTCTAGTCTTTCTTT+TGG - chr1_4:2284976-2284995 None:intergenic 40.0%
TTGTAGTCCAATGGCAATGA+AGG - chr1_4:2285015-2285034 None:intergenic 40.0%
ACAGCCTCGTGTAAAAAAAC+AGG + chr1_4:2285521-2285540 Msa0143360:intron 40.0%
CAGCCTCGTGTAAAAAAACA+GGG + chr1_4:2285522-2285541 Msa0143360:intron 40.0%
CTGCGTACATTACACTAAAG+TGG + chr1_4:2285550-2285569 Msa0143360:intron 40.0%
CGTACATTACACTAAAGTGG+TGG + chr1_4:2285553-2285572 Msa0143360:intron 40.0%
!! AGCATGGGTTTTTGTTTCGT+TGG + chr1_4:2285648-2285667 Msa0143360:intron 40.0%
TTGGGCTCTTATATGCCTAA+TGG + chr1_4:2285710-2285729 Msa0143360:intron 40.0%
TTGGACGTCACCTTAAACTT+TGG - chr1_4:2285761-2285780 None:intergenic 40.0%
AAGGTGGCTAGAAAAATGTG+TGG + chr1_4:2286082-2286101 Msa0143360:CDS 40.0%
! GTGACAAGACACTAGCATTT+TGG + chr1_4:2286138-2286157 Msa0143360:CDS 40.0%
!!! GACACTAGCATTTTGGTTGA+TGG + chr1_4:2286145-2286164 Msa0143360:CDS 40.0%
!!! AGCATTTTGGTTGATGGACA+AGG + chr1_4:2286151-2286170 Msa0143360:CDS 40.0%
AGAAACAGCGAGAGAATCAA+TGG - chr1_4:2286411-2286430 None:intergenic 40.0%
CGATCAATTAGAGGAGTAGA+TGG - chr1_4:2286591-2286610 None:intergenic 40.0%
TCTACTCCTCTAATTGATCG+TGG + chr1_4:2286591-2286610 Msa0143360:CDS 40.0%
GCAATTCCACGATCAATTAG+AGG - chr1_4:2286600-2286619 None:intergenic 40.0%
TTAAATACCCTTCACCACCA+AGG - chr1_4:2286656-2286675 None:intergenic 40.0%
!! AGAGTGGATCGATTTTCCAA+GGG + chr1_4:2286841-2286860 Msa0143360:intron 40.0%
GGTGATCAACATCTTCCTAA+TGG + chr1_4:2286863-2286882 Msa0143360:CDS 40.0%
CTTGCACAAGTTGTGAATGA+AGG - chr1_4:2286961-2286980 None:intergenic 40.0%
!! ATCCAACGTTTGTTGTCATG+GGG + chr1_4:2286992-2287011 Msa0143360:intron 40.0%
GTTAGTTGAGAACTACTTGG+TGG + chr1_4:2287020-2287039 Msa0143360:intron 40.0%
! TTTTTCCGATCCTTATTCGG+AGG + chr1_4:2287148-2287167 Msa0143360:intron 40.0%
GGAACCAGAGAATGTGTAAT+AGG + chr1_4:2287208-2287227 Msa0143360:intron 40.0%
ACATGCATGTTAAATGGCCA+GGG - chr1_4:2287271-2287290 None:intergenic 40.0%
TACATGCATGTTAAATGGCC+AGG - chr1_4:2287272-2287291 None:intergenic 40.0%
AGCTCAACAAAAGGAATTCC+AGG + chr1_4:2287672-2287691 Msa0143360:intron 40.0%
AAACGACGATCAGTTCGTAT+GGG - chr1_4:2287723-2287742 None:intergenic 40.0%
TAAACGACGATCAGTTCGTA+TGG - chr1_4:2287724-2287743 None:intergenic 40.0%
TACGAACTGATCGTCGTTTA+TGG + chr1_4:2287724-2287743 Msa0143360:intron 40.0%
! GTCTTTTGCAGCCATTTCAA+AGG + chr1_4:2287749-2287768 Msa0143360:intron 40.0%
! ACTATCACTGCCCTTTGAAA+TGG - chr1_4:2287763-2287782 None:intergenic 40.0%
TCATAGAGAGCAACAGAGAT+CGG - chr1_4:2287953-2287972 None:intergenic 40.0%
GTGACAATCGATGTTGTGAA+CGG + chr1_4:2288019-2288038 Msa0143360:intron 40.0%
TTGTGAACGGTAGAGGAAAA+TGG + chr1_4:2288032-2288051 Msa0143360:intron 40.0%
! CCAGTCCATTTTAAACGGAT+GGG - chr1_4:2288141-2288160 None:intergenic 40.0%
! ACCAGTCCATTTTAAACGGA+TGG - chr1_4:2288142-2288161 None:intergenic 40.0%
! GGTGTGCAGTCCATTTTAAA+CGG - chr1_4:2288216-2288235 None:intergenic 40.0%
ATTCAGAAAGACGAAGGAGT+TGG - chr1_4:2288304-2288323 None:intergenic 40.0%
AACAGAAAGGCTAATCCTTG+TGG - chr1_4:2288396-2288415 None:intergenic 40.0%
! AGTTGCTACTTGCTAGCATA+TGG + chr1_4:2288743-2288762 Msa0143360:intron 40.0%
! AGTTGCTACTTGCTAGCATA+TGG + chr1_4:2288743-2288762 Msa0143360:intron 40.0%
TACCAGTACTTCTCCATGTT+TGG - chr1_4:2289235-2289254 None:intergenic 40.0%
TAGCTATGATGCATAGGTAC+GGG - chr1_4:2289577-2289596 None:intergenic 40.0%
TAGCCTTTGAACTAATGCCT+TGG - chr1_4:2289716-2289735 None:intergenic 40.0%
CAGCACCTAGAAGAAAGATA+TGG + chr1_4:2289820-2289839 Msa0143360:CDS 40.0%
GAAATCATGAACTGCACCAA+AGG - chr1_4:2290177-2290196 None:intergenic 40.0%
! AAAGTTGGCTGTTTAAAGCC+AGG + chr1_4:2290309-2290328 Msa0143360:CDS 40.0%
! AAGTTGGCTGTTTAAAGCCA+GGG + chr1_4:2290310-2290329 Msa0143360:CDS 40.0%
TATCACACTTTCCTGGATCA+GGG - chr1_4:2290486-2290505 None:intergenic 40.0%
ATATCACACTTTCCTGGATC+AGG - chr1_4:2290487-2290506 None:intergenic 40.0%
TGATACGAGACTTCTACTGA+CGG + chr1_4:2290631-2290650 Msa0143360:intron 40.0%
AGGCATAATCCACCAATAAG+AGG - chr1_4:2290739-2290758 None:intergenic 40.0%
GATTCAGATGAGTCCTTGTT+TGG + chr1_4:2290781-2290800 Msa0143360:CDS 40.0%
TACTGCTGAGTACTTCACTT+CGG + chr1_4:2290825-2290844 Msa0143360:CDS 40.0%
TGAGTACTTCACTTCGGTAA+GGG + chr1_4:2290831-2290850 Msa0143360:intron 40.0%
!!! GACACTCATTTTGAAACGGA+GGG - chr1_4:2291185-2291204 None:intergenic 40.0%
!!! TGACACTCATTTTGAAACGG+AGG - chr1_4:2290945-2290964 None:intergenic 40.0%
TGTGAGAGAAAAGTTGGAGA+GGG - chr1_4:2291047-2291066 None:intergenic 40.0%
TTGTGAGAGAAAAGTTGGAG+AGG - chr1_4:2291048-2291067 None:intergenic 40.0%
!!! GACACTCATTTTGAAACGGA+GGG + chr1_4:2291185-2291204 Msa0143360:intron 40.0%
! GGATGATTTTACAGGAAGGA+TGG + chr1_4:2291293-2291312 Msa0143360:intron 40.0%
TTCTACAAGGTGCATAAACG+AGG - chr1_4:2291342-2291361 None:intergenic 40.0%
TATACCACTGCTGTTCTACA+AGG - chr1_4:2291355-2291374 None:intergenic 40.0%
GTGGTATATGCTCTTGTAGA+TGG + chr1_4:2291367-2291386 Msa0143360:CDS 40.0%
GGTATATGCTCTTGTAGATG+GGG + chr1_4:2291369-2291388 Msa0143360:CDS 40.0%
GCCTGTTAATCACCATAAGT+TGG - chr1_4:2291538-2291557 None:intergenic 40.0%
CAGAACTCAACCAAAATGTG+TGG + chr1_4:2291573-2291592 Msa0143360:three_prime_UTR 40.0%
CATACACATGCACAAACACT+TGG - chr1_4:2291642-2291661 None:intergenic 40.0%
! GGCCTTCAGCAAAATTTTCT+AGG - chr1_4:2291850-2291869 None:intergenic 40.0%
AGTTGCCTTAGTCTAAATGG+TGG + chr1_4:2291955-2291974 Msa0143360:three_prime_UTR 40.0%
AGGTTCCACCATTTAGACTA+AGG - chr1_4:2291963-2291982 None:intergenic 40.0%
GGTGAAGAATGGCGTTATCT+GGG - chr1_4:2272139-2272158 None:intergenic 45.0%
CTGAATAAGTCCAGCTTACG+CGG + chr1_4:2272425-2272444 Msa0143360:CDS 45.0%
!! GCATCCTCTGAGGTTATATC+AGG - chr1_4:2273607-2273626 None:intergenic 45.0%
TATAACCTCAGAGGATGCAC+AGG + chr1_4:2273609-2273628 Msa0143360:CDS 45.0%
AGCAGCTAGCAGTTATAGAG+AGG + chr1_4:2274569-2274588 Msa0143360:CDS 45.0%
GCTAGCAGTTATAGAGAGGT+CGG + chr1_4:2274573-2274592 Msa0143360:CDS 45.0%
CTAGCAGTTATAGAGAGGTC+GGG + chr1_4:2274574-2274593 Msa0143360:CDS 45.0%
TAGCAGTTATAGAGAGGTCG+GGG + chr1_4:2274575-2274594 Msa0143360:CDS 45.0%
ACCGTCAGCATCTTGATTTC+CGG + chr1_4:2274769-2274788 Msa0143360:CDS 45.0%
ACCGGAAATCAAGATGCTGA+CGG - chr1_4:2274773-2274792 None:intergenic 45.0%
! CTTGTTGTATGTGCTCTTGG+TGG + chr1_4:2274940-2274959 Msa0143360:intron 45.0%
ACAGAACCGAGTTACACTGT+TGG + chr1_4:2275288-2275307 Msa0143360:intron 45.0%
GATGGACCAACAGTGTAACT+CGG - chr1_4:2275297-2275316 None:intergenic 45.0%
TGTAGCTCACTTCACTTAGG+TGG + chr1_4:2275318-2275337 Msa0143360:intron 45.0%
! TCAGGCTTTGGTTTCACACA+TGG - chr1_4:2275661-2275680 None:intergenic 45.0%
! GGTCTTGATGCATTTTCTCG+TGG + chr1_4:2275767-2275786 Msa0143360:CDS 45.0%
TCTCGTGGGTACGAAAAGTT+AGG + chr1_4:2275782-2275801 Msa0143360:CDS 45.0%
AAAAGTTAGGCTTCACACGC+AGG + chr1_4:2275795-2275814 Msa0143360:CDS 45.0%
ACTTATGACACAGAAGGGAG+GGG - chr1_4:2275861-2275880 None:intergenic 45.0%
CCTCGTGGAGCAGTATTATA+TGG - chr1_4:2276218-2276237 None:intergenic 45.0%
CCATATAATACTGCTCCACG+AGG + chr1_4:2276215-2276234 Msa0143360:intron 45.0%
GTTGTTGTCATGTGACCGTA+AGG + chr1_4:2276262-2276281 Msa0143360:intron 45.0%
! TTACACAAGAGGCTGTTTCC+AGG - chr1_4:2276302-2276321 None:intergenic 45.0%
GCTGCGTACAATACACCAAA+TGG + chr1_4:2276334-2276353 Msa0143360:intron 45.0%
GCGTACAATACACCAAATGG+TGG + chr1_4:2276337-2276356 Msa0143360:intron 45.0%
CTGCTCCACAAAACATACTC+AGG + chr1_4:2276422-2276441 Msa0143360:intron 45.0%
!! GCTTTTGTTTGCAGTGCTAC+AGG + chr1_4:2276610-2276629 Msa0143360:intron 45.0%
CAGGCATTACTTACAGAGAG+TGG + chr1_4:2276629-2276648 Msa0143360:CDS 45.0%
AATCAGCGAAATGGGAGCAA+AGG - chr1_4:2276866-2276885 None:intergenic 45.0%
CTTTCTTGGCAAAGTCACGA+GGG + chr1_4:2276994-2277013 Msa0143360:intron 45.0%
! ACTAATGCTGCTGACTGAAG+AGG - chr1_4:2277578-2277597 None:intergenic 45.0%
CTTCAGTCAGCAGCATTAGT+TGG + chr1_4:2277578-2277597 Msa0143360:intron 45.0%
CGGGTCATTACATCTGCATT+TGG - chr1_4:2277623-2277642 None:intergenic 45.0%
TGAGTAGGACAGAACAAGAG+GGG - chr1_4:2277767-2277786 None:intergenic 45.0%
GAAGTCATACCCTGTATGGA+TGG + chr1_4:2277913-2277932 Msa0143360:intron 45.0%
!! AACAGGACGATTTTGGTGTG+TGG + chr1_4:2278054-2278073 Msa0143360:intron 45.0%
!! ACAGGACGATTTTGGTGTGT+GGG + chr1_4:2278055-2278074 Msa0143360:intron 45.0%
GGTGAACCATCGGCATTATT+TGG - chr1_4:2278092-2278111 None:intergenic 45.0%
!! AGGAATTGGTGGTGAACCAT+CGG - chr1_4:2278102-2278121 None:intergenic 45.0%
ACTCGAGAACCATGAGGAAT+TGG - chr1_4:2278116-2278135 None:intergenic 45.0%
GCTATAGCCATGTTGCATAG+TGG - chr1_4:2278266-2278285 None:intergenic 45.0%
CCGCCACTATTTAACAACAC+TGG + chr1_4:2278351-2278370 Msa0143360:intron 45.0%
TATGATTAGGCTTCCCTCCA+GGG - chr1_4:2278758-2278777 None:intergenic 45.0%
!!! GCAAACCACGCTAGTTTTGA+AGG + chr1_4:2279064-2279083 Msa0143360:intron 45.0%
TTGAAGGAGATTGGCAAGCT+AGG + chr1_4:2279080-2279099 Msa0143360:intron 45.0%
TCAAAGAATTCGGTACGTGG+GGG + chr1_4:2279242-2279261 Msa0143360:intron 45.0%
ATCACAGGTCCATCTTCCTT+AGG - chr1_4:2279321-2279340 None:intergenic 45.0%
GATGGACCTGTGATGTTTCA+TGG + chr1_4:2279327-2279346 Msa0143360:intron 45.0%
ACCTGTGATGTTTCATGGAG+AGG + chr1_4:2279332-2279351 Msa0143360:intron 45.0%
ACCTCTCCATGAAACATCAC+AGG - chr1_4:2279336-2279355 None:intergenic 45.0%
!! TGGTAGTGGATGGATGTGTT+GGG - chr1_4:2279455-2279474 None:intergenic 45.0%
AAAATGAAAGAGTGGGCCAG+TGG + chr1_4:2279509-2279528 Msa0143360:intron 45.0%
! GTGGGATGTATAGTTTGCCT+CGG + chr1_4:2279616-2279635 Msa0143360:intron 45.0%
CGTACCAATACGCAAACGAA+TGG + chr1_4:2279675-2279694 Msa0143360:intron 45.0%
TTCGCCATTCGTTTGCGTAT+TGG - chr1_4:2279682-2279701 None:intergenic 45.0%
ACGTTTGACATGTATGGTCC+TGG - chr1_4:2279876-2279895 None:intergenic 45.0%
TCAAGGACTCAATTCCTGCT+TGG + chr1_4:2279998-2280017 Msa0143360:CDS 45.0%
AAATTCTCTGTACAGGCTCC+TGG + chr1_4:2280024-2280043 Msa0143360:CDS 45.0%
TAGAATCTTACCTCCTCTGG+GGG - chr1_4:2280081-2280100 None:intergenic 45.0%
GTAGAATCTTACCTCCTCTG+GGG - chr1_4:2280082-2280101 None:intergenic 45.0%
CTATTTGTGGGGGTTTCAAG+GGG + chr1_4:2280223-2280242 Msa0143360:intron 45.0%
TGGTCCCTGAAAATGCTACA+AGG + chr1_4:2280511-2280530 Msa0143360:intron 45.0%
TTTGCGAGTTTAGAGGGGAA+GGG + chr1_4:2280657-2280676 Msa0143360:intron 45.0%
GGAAAAAAGGAAGGAGCAAG+TGG + chr1_4:2280693-2280712 Msa0143360:intron 45.0%
ATAGAGTACATTGGGAGAGG+AGG + chr1_4:2280721-2280740 Msa0143360:intron 45.0%
TAGAGTACATTGGGAGAGGA+GGG + chr1_4:2280722-2280741 Msa0143360:intron 45.0%
!! GTATTGGAAGAGGGTTTTGG+GGG + chr1_4:2280805-2280824 Msa0143360:intron 45.0%
!!! TATTGGAAGAGGGTTTTGGG+GGG + chr1_4:2280806-2280825 Msa0143360:intron 45.0%
! CTTTGTTTGGGAGTTTGGAG+GGG - chr1_4:2281016-2281035 None:intergenic 45.0%
!! GCTTTGTTTGGGAGTTTGGA+GGG - chr1_4:2281017-2281036 None:intergenic 45.0%
AGGATATATGAGGCACACGT+TGG + chr1_4:2281409-2281428 Msa0143360:CDS 45.0%
GGATATATGAGGCACACGTT+GGG + chr1_4:2281410-2281429 Msa0143360:CDS 45.0%
! GAGAGTATAAAGTACGCACC+GGG - chr1_4:2281444-2281463 None:intergenic 45.0%
! AACCATGATGTTGCTTGGGT+TGG - chr1_4:2281538-2281557 None:intergenic 45.0%
CTGCCTCGCATTAAAAAGCT+TGG + chr1_4:2281967-2281986 Msa0143360:CDS 45.0%
!!! ACCATCAGCATTTTGGGATG+GGG - chr1_4:2282100-2282119 None:intergenic 45.0%
!! GAACCATCAGCATTTTGGGA+TGG - chr1_4:2282102-2282121 None:intergenic 45.0%
! GTCAGGCCATCAATTTTAGG+AGG - chr1_4:2282195-2282214 None:intergenic 45.0%
ATAGACAGAGCCCATGAACT+AGG + chr1_4:2282310-2282329 Msa0143360:CDS 45.0%
AACAAGCAGGCCTAGTTCAT+GGG - chr1_4:2282323-2282342 None:intergenic 45.0%
!!! GACAGCTAGCTTTTAAGGGA+GGG - chr1_4:2282445-2282464 None:intergenic 45.0%
!!! TGACAGCTAGCTTTTAAGGG+AGG - chr1_4:2282446-2282465 None:intergenic 45.0%
CCCTTAAAAGCTAGCTGTCA+AGG + chr1_4:2282446-2282465 Msa0143360:intron 45.0%
!!! CCCTTGACAGCTAGCTTTTA+AGG - chr1_4:2282450-2282469 None:intergenic 45.0%
TACTACTCGATGTGGGACTT+AGG + chr1_4:2282497-2282516 Msa0143360:intron 45.0%
GAAAGAAGGGCTACATATGG+AGG - chr1_4:2282623-2282642 None:intergenic 45.0%
GATGGCCTCAACATGTTTGA+TGG + chr1_4:2283029-2283048 Msa0143360:CDS 45.0%
ACGGGGTTATCATTGGATGT+GGG + chr1_4:2283082-2283101 Msa0143360:CDS 45.0%
! TTCAAATGCTAGATGGTGGC+TGG + chr1_4:2283257-2283276 Msa0143360:CDS 45.0%
GACTGCAGGTACATTCTAGT+TGG + chr1_4:2283343-2283362 Msa0143360:intron 45.0%
AACCTGGCTGCATTCTTACT+TGG + chr1_4:2283405-2283424 Msa0143360:intron 45.0%
TACCAAGTAAGAATGCAGCC+AGG - chr1_4:2283410-2283429 None:intergenic 45.0%
GTCAGAACAGTGCAGAGAAT+TGG + chr1_4:2283498-2283517 Msa0143360:intron 45.0%
AGCAGGTTATGTCCATGCAT+TGG - chr1_4:2283690-2283709 None:intergenic 45.0%
TCTACTTAACGCGAAGAGTG+GGG - chr1_4:2283776-2283795 None:intergenic 45.0%
CTCTACTTAACGCGAAGAGT+GGG - chr1_4:2283777-2283796 None:intergenic 45.0%
! ACAGGGATCGTTTTGCATTG+TGG + chr1_4:2284023-2284042 Msa0143360:intron 45.0%
! GCGGTTGTCCTTTGAAGAAA+AGG + chr1_4:2284229-2284248 Msa0143360:intron 45.0%
AGATTCTTGAACCTTGCTGC+AGG + chr1_4:2284317-2284336 Msa0143360:intron 45.0%
TGCAACTGATGTTGAAGCTG+TGG + chr1_4:2284377-2284396 Msa0143360:CDS 45.0%
TCTTTCCATTTCCAGGTGAG+TGG + chr1_4:2284643-2284662 Msa0143360:intron 45.0%
AACATGAACGAACCACGACA+TGG + chr1_4:2284912-2284931 Msa0143360:intron 45.0%
! CATTTTGTTGCACCATGTCG+TGG - chr1_4:2284927-2284946 None:intergenic 45.0%
ACAACTTTACCGTTGTGCCA+AGG - chr1_4:2285477-2285496 None:intergenic 45.0%
GTTGTTGTCACGTGACTGAA+AGG + chr1_4:2285492-2285511 Msa0143360:intron 45.0%
GACGTCACCTTAAACTTTGG+AGG - chr1_4:2285758-2285777 None:intergenic 45.0%
TTCCTTCAATGCACAGAGCT+TGG + chr1_4:2285826-2285845 Msa0143360:intron 45.0%
TACCAAGCTCTGTGCATTGA+AGG - chr1_4:2285831-2285850 None:intergenic 45.0%
TCGATGCAGGCTTCAATTGA+TGG - chr1_4:2285914-2285933 None:intergenic 45.0%
TCCACACACTGACAAACAGA+AGG + chr1_4:2286063-2286082 Msa0143360:CDS 45.0%
ACCTTCTGTTTGTCAGTGTG+TGG - chr1_4:2286067-2286086 None:intergenic 45.0%
ACACACTGACAAACAGAAGG+TGG + chr1_4:2286066-2286085 Msa0143360:CDS 45.0%
TGAAAGTCATGACCAAGCCT+TGG + chr1_4:2286112-2286131 Msa0143360:CDS 45.0%
TAGTGTCTTGTCACCAACCA+AGG - chr1_4:2286132-2286151 None:intergenic 45.0%
AGGCTTATTACTATGGGCCT+TGG + chr1_4:2286636-2286655 Msa0143360:CDS 45.0%
CTTATTACTATGGGCCTTGG+TGG + chr1_4:2286639-2286658 Msa0143360:CDS 45.0%
!! CAGAGTGGATCGATTTTCCA+AGG + chr1_4:2286840-2286859 Msa0143360:intron 45.0%
!! GAGTGGATCGATTTTCCAAG+GGG + chr1_4:2286842-2286861 Msa0143360:intron 45.0%
CTAATGGCACAGTAGTTCCT+GGG + chr1_4:2286879-2286898 Msa0143360:CDS 45.0%
ATGCAGGCGTAGATTTGACT+TGG + chr1_4:2286922-2286941 Msa0143360:CDS 45.0%
AACCCCATGACAACAAACGT+TGG - chr1_4:2286997-2287016 None:intergenic 45.0%
! TCCATTTGATAGCCACTTGG+TGG + chr1_4:2287390-2287409 Msa0143360:intron 45.0%
TCCACCAAGTGGCTATCAAA+TGG - chr1_4:2287394-2287413 None:intergenic 45.0%
! TTGATAGCCACTTGGTGGAT+TGG + chr1_4:2287395-2287414 Msa0143360:intron 45.0%
! GTTCAAACCAGTGCTGAATC+CGG + chr1_4:2287456-2287475 Msa0143360:intron 45.0%
! ACCAGATTTGGAACTGGAAC+CGG - chr1_4:2287478-2287497 None:intergenic 45.0%
GCAATGATTAGCAATGAGCC+TGG - chr1_4:2287693-2287712 None:intergenic 45.0%
GGTTCGGATATGGATGATGT+GGG - chr1_4:2287807-2287826 None:intergenic 45.0%
! TGGTTCGGATATGGATGATG+TGG - chr1_4:2287808-2287827 None:intergenic 45.0%
TCATCCATATCCGAACCATG+AGG + chr1_4:2287810-2287829 Msa0143360:intron 45.0%
ATAGAGAGCAACAGAGATCG+GGG - chr1_4:2287951-2287970 None:intergenic 45.0%
CATAGAGAGCAACAGAGATC+GGG - chr1_4:2287952-2287971 None:intergenic 45.0%
ATCGATGTTGTGAACGGTAG+AGG + chr1_4:2288025-2288044 Msa0143360:intron 45.0%
! AGCTAAGTTGAGAGTGACAG+AGG + chr1_4:2288071-2288090 Msa0143360:intron 45.0%
! CCCATCCGTTTAAAATGGAC+TGG + chr1_4:2288138-2288157 Msa0143360:intron 45.0%
TGTGATCTCTTTCTGCAGCA+TGG + chr1_4:2288431-2288450 Msa0143360:intron 45.0%
!! TGCAGCATGGTTGATGATGT+TGG + chr1_4:2288444-2288463 Msa0143360:intron 45.0%
CTTGCTAGCATATGGACATG+TGG + chr1_4:2288751-2288770 Msa0143360:intron 45.0%
AAGCATGGGTACTCCAAACA+TGG + chr1_4:2288911-2288930 Msa0143360:intron 45.0%
CTTGCTAGCATATGGACATG+TGG + chr1_4:2288751-2288770 Msa0143360:intron 45.0%
AAGCATGGGTACTCCAAACA+TGG + chr1_4:2288911-2288930 Msa0143360:intron 45.0%
! CTCCAAACATGGAGAAGTAC+TGG + chr1_4:2289230-2289249 Msa0143360:intron 45.0%
!! ACATGGAGAAGTACTGGTAC+CGG + chr1_4:2289236-2289255 Msa0143360:intron 45.0%
! AAATGAAGGTACGGGTACGT+TGG - chr1_4:2289507-2289526 None:intergenic 45.0%
!! ACGGGTACTGGTACGTAATA+CGG - chr1_4:2289541-2289560 None:intergenic 45.0%
TGCTTTGACATTCAGCAGTG+AGG + chr1_4:2289624-2289643 Msa0143360:intron 45.0%
TCATGAACTGCACCAAAGGT+AGG - chr1_4:2290173-2290192 None:intergenic 45.0%
AATCTTCGAAAGGGACAACC+TGG + chr1_4:2290242-2290261 Msa0143360:CDS 45.0%
ACTTTCCTGGATCAGGGTAT+GGG - chr1_4:2290480-2290499 None:intergenic 45.0%
! TCAGATGAGTCCTTGTTTGG+TGG + chr1_4:2290784-2290803 Msa0143360:CDS 45.0%
CCTATTGAAGCCACCAAACA+AGG - chr1_4:2290797-2290816 None:intergenic 45.0%
! CCTTGTTTGGTGGCTTCAAT+AGG + chr1_4:2290794-2290813 Msa0143360:CDS 45.0%
CTGAGTACTTCACTTCGGTA+AGG + chr1_4:2290830-2290849 Msa0143360:intron 45.0%
!!! CGACACTCATTTTGAAACGG+AGG + chr1_4:2291184-2291203 Msa0143360:intron 45.0%
AGGAAGGATGGTATGATGAC+CGG + chr1_4:2291305-2291324 Msa0143360:intron 45.0%
ACAAGGTGCATAAACGAGGA+AGG - chr1_4:2291338-2291357 None:intergenic 45.0%
ACTCCAACTGACAGTTCAAC+TGG - chr1_4:2291406-2291425 None:intergenic 45.0%
! AACTAGCGCTCCACACATTT+TGG - chr1_4:2291586-2291605 None:intergenic 45.0%
ATGCACAAACACTTGGACGT+TGG - chr1_4:2291635-2291654 None:intergenic 45.0%
!! CAAAATAAAAATAAAAATTA+TGG - chr1_4:2278655-2278674 None:intergenic 5.0%
!!! TTTTTACTTTAAATTTTTAT+AGG + chr1_4:2280322-2280341 Msa0143360:intron 5.0%
!!! TTTTACTTTAAATTTTTATA+GGG + chr1_4:2280323-2280342 Msa0143360:intron 5.0%
!! TTAATAATAATTAAGTAATA+AGG - chr1_4:2281066-2281085 None:intergenic 5.0%
!! AAATATATATATATATGAAT+AGG + chr1_4:2283841-2283860 Msa0143360:intron 5.0%
!!! TTATTAGATTATTTTTTATT+AGG + chr1_4:2285089-2285108 Msa0143360:intron 5.0%
AGCATGGTGATTGGGGTTGT+GGG - chr1_4:2272066-2272085 None:intergenic 50.0%
TAGCATGGTGATTGGGGTTG+TGG - chr1_4:2272067-2272086 None:intergenic 50.0%
GTTATCTGGGTGGAGAAGTG+AGG - chr1_4:2272126-2272145 None:intergenic 50.0%
GAAGAATGGCGTTATCTGGG+TGG - chr1_4:2272136-2272155 None:intergenic 50.0%
CGGTGAAGAATGGCGTTATC+TGG - chr1_4:2272140-2272159 None:intergenic 50.0%
AATAAGTCCAGCTTACGCGG+TGG + chr1_4:2272428-2272447 Msa0143360:CDS 50.0%
TGCATGCTGCCTACACACAA+TGG - chr1_4:2274311-2274330 None:intergenic 50.0%
CGCTCAAGCCAAGAAGACAT+CGG + chr1_4:2274647-2274666 Msa0143360:CDS 50.0%
! ATTTTCTGTCCAGCACCAGG+TGG - chr1_4:2274720-2274739 None:intergenic 50.0%
! GCTCTTGGTGGTTAGCTAAG+AGG + chr1_4:2274952-2274971 Msa0143360:intron 50.0%
AGATGAGTTGTCCGCTGTCT+TGG + chr1_4:2274996-2275015 Msa0143360:intron 50.0%
TTATGACACAGAAGGGAGGG+GGG - chr1_4:2275859-2275878 None:intergenic 50.0%
CTTATGACACAGAAGGGAGG+GGG - chr1_4:2275860-2275879 None:intergenic 50.0%
CAACTTTACCAGTTGCGCCA+AGG - chr1_4:2276246-2276265 None:intergenic 50.0%
GTCATGTGACCGTAAGGTCA+CGG + chr1_4:2276268-2276287 Msa0143360:intron 50.0%
TCATGTGACCGTAAGGTCAC+GGG + chr1_4:2276269-2276288 Msa0143360:intron 50.0%
GACTTGAACCCGTGACCTTA+CGG - chr1_4:2276280-2276299 None:intergenic 50.0%
TTGGACCTCAACTGCTATGG+CGG + chr1_4:2276819-2276838 Msa0143360:intron 50.0%
GCTTTCTTGGCAAAGTCACG+AGG + chr1_4:2276993-2277012 Msa0143360:intron 50.0%
GGGAACGGAAGTGAGATTCT+AGG - chr1_4:2277747-2277766 None:intergenic 50.0%
AGGACAGAACAAGAGGGGAA+CGG - chr1_4:2277762-2277781 None:intergenic 50.0%
AGACTCCTAGCCCTGCATAT+TGG + chr1_4:2277962-2277981 Msa0143360:intron 50.0%
GATGTCCAATATGCAGGGCT+AGG - chr1_4:2277970-2277989 None:intergenic 50.0%
GGTTCACCACCAATTCCTCA+TGG + chr1_4:2278104-2278123 Msa0143360:CDS 50.0%
CGAGAACCATGAGGAATTGG+TGG - chr1_4:2278113-2278132 None:intergenic 50.0%
TCCTCATGGTTCTCGAGTCA+AGG + chr1_4:2278118-2278137 Msa0143360:CDS 50.0%
! ACCTTGACTCGAGAACCATG+AGG - chr1_4:2278122-2278141 None:intergenic 50.0%
GTATGATTAGGCTTCCCTCC+AGG - chr1_4:2278759-2278778 None:intergenic 50.0%
ACACGGTTCGCAATTCGCTT+CGG + chr1_4:2279183-2279202 Msa0143360:intron 50.0%
ATTCGCTTCGGTACGTGGTA+CGG + chr1_4:2279195-2279214 Msa0143360:intron 50.0%
CAAAGAATTCGGTACGTGGG+GGG + chr1_4:2279243-2279262 Msa0143360:intron 50.0%
ACGACGAACCCATAACGTAC+CGG - chr1_4:2279278-2279297 None:intergenic 50.0%
CAGGTCCATCTTCCTTAGGT+AGG - chr1_4:2279317-2279336 None:intergenic 50.0%
!! GGTAGTGGATGGATGTGTTG+GGG - chr1_4:2279454-2279473 None:intergenic 50.0%
!! GTGGTAGTGGATGGATGTGT+TGG - chr1_4:2279456-2279475 None:intergenic 50.0%
!! TGGATAGCTGTGGTAGTGGA+TGG - chr1_4:2279465-2279484 None:intergenic 50.0%
TACTGCAGTACACATGGCAG+TGG - chr1_4:2279485-2279504 None:intergenic 50.0%
! TCTCTGAAAAGAGCGTACCG+AGG - chr1_4:2279636-2279655 None:intergenic 50.0%
TACGCAAACGAATGGCGAAC+TGG + chr1_4:2279683-2279702 Msa0143360:intron 50.0%
ATCCACATGGATACACCCTC+TGG + chr1_4:2279973-2279992 Msa0143360:CDS 50.0%
! TTCCAGAGGGTGTATCCATG+TGG - chr1_4:2279978-2279997 None:intergenic 50.0%
!! GGATACACCCTCTGGAATCA+AGG + chr1_4:2279981-2280000 Msa0143360:CDS 50.0%
ATACTATGATCCCCCAGAGG+AGG + chr1_4:2280068-2280087 Msa0143360:CDS 50.0%
GTTTGCGAGTTTAGAGGGGA+AGG + chr1_4:2280656-2280675 Msa0143360:intron 50.0%
! ACATTGGGAGAGGAGGGTTT+TGG + chr1_4:2280728-2280747 Msa0143360:intron 50.0%
! CATTGGGAGAGGAGGGTTTT+GGG + chr1_4:2280729-2280748 Msa0143360:intron 50.0%
! ATTGGGAGAGGAGGGTTTTG+GGG + chr1_4:2280730-2280749 Msa0143360:intron 50.0%
!!! AAGAGGGTTTTGGGGGGTTT+AGG + chr1_4:2280812-2280831 Msa0143360:intron 50.0%
!! GGCTTTGTTTGGGAGTTTGG+AGG - chr1_4:2281018-2281037 None:intergenic 50.0%
TGCCAACCCAAGCAACATCA+TGG + chr1_4:2281533-2281552 Msa0143360:intron 50.0%
! TGCTTTGAACCATGTGGTGC+AGG + chr1_4:2281903-2281922 Msa0143360:intron 50.0%
!!! TTTTTGGCTCCTGCACCACA+TGG - chr1_4:2281915-2281934 None:intergenic 50.0%
TCCCCATCCCAAAATGCTGA+TGG + chr1_4:2282096-2282115 Msa0143360:intron 50.0%
TTTGCACCTAGCAGTCGGTT+TGG + chr1_4:2282262-2282281 Msa0143360:CDS 50.0%
GAACAAGCAGGCCTAGTTCA+TGG - chr1_4:2282324-2282343 None:intergenic 50.0%
ACTAGGCCTGCTTGTTCTGA+TGG + chr1_4:2282327-2282346 Msa0143360:CDS 50.0%
!! TCGGTGCTATGATAGGGACT+TGG - chr1_4:2282536-2282555 None:intergenic 50.0%
TGTCGTAGAGTGCATCTTCC+AGG - chr1_4:2282575-2282594 None:intergenic 50.0%
CTACATATGGAGGGACTGAC+AGG - chr1_4:2282613-2282632 None:intergenic 50.0%
!! TGTCGGTGGGTTGGAAAGAA+GGG - chr1_4:2282636-2282655 None:intergenic 50.0%
!! TTGTCGGTGGGTTGGAAAGA+AGG - chr1_4:2282637-2282656 None:intergenic 50.0%
GATAACCCCGTGAACCAGAA+TGG - chr1_4:2283073-2283092 None:intergenic 50.0%
CTGGTTCACGGGGTTATCAT+TGG + chr1_4:2283075-2283094 Msa0143360:CDS 50.0%
CACGGGGTTATCATTGGATG+TGG + chr1_4:2283081-2283100 Msa0143360:CDS 50.0%
! GTACACTCATCATGGACTGC+AGG + chr1_4:2283329-2283348 Msa0143360:CDS 50.0%
GCTCTACTTAACGCGAAGAG+TGG - chr1_4:2283778-2283797 None:intergenic 50.0%
! AGGAGAACAAAGGGAGGCAT+AGG + chr1_4:2283861-2283880 Msa0143360:intron 50.0%
GCATTCCACTCACCTGGAAA+TGG - chr1_4:2284651-2284670 None:intergenic 50.0%
ATGTTGGCATTCCACTCACC+TGG - chr1_4:2284657-2284676 None:intergenic 50.0%
TGAGTCGGAAGGCAGAATGT+TGG - chr1_4:2284673-2284692 None:intergenic 50.0%
TTCTGCCTTCCGACTCAAGA+TGG + chr1_4:2284676-2284695 Msa0143360:CDS 50.0%
CCAATCCCACCATCTTGAGT+CGG - chr1_4:2284688-2284707 None:intergenic 50.0%
CTCAATCCACTTGTCGGCAA+CGG - chr1_4:2284734-2284753 None:intergenic 50.0%
TCATAAGACATCCCACGGAC+AGG - chr1_4:2284826-2284845 None:intergenic 50.0%
CTGGGCTCATCAATGCAGAT+TGG - chr1_4:2285426-2285445 None:intergenic 50.0%
ATGTTCAAAAGGGGAGGCCT+TGG + chr1_4:2285457-2285476 Msa0143360:intron 50.0%
TTGTCACGTGACTGAAAGGC+TGG + chr1_4:2285496-2285515 Msa0143360:intron 50.0%
TGCTTATACTAAGGGCAGCC+CGG - chr1_4:2285618-2285637 None:intergenic 50.0%
AGTCATGACCAAGCCTTGGT+TGG + chr1_4:2286116-2286135 Msa0143360:CDS 50.0%
TCTTGTCACCAACCAAGGCT+TGG - chr1_4:2286127-2286146 None:intergenic 50.0%
! TATGCTCTGTTGGCTGCTTC+AGG + chr1_4:2286536-2286555 Msa0143360:intron 50.0%
GGAAGATGTTGATCACCCCT+TGG - chr1_4:2286860-2286879 None:intergenic 50.0%
! CCAGGAACTACTGTGCCATT+AGG - chr1_4:2286881-2286900 None:intergenic 50.0%
CCTAATGGCACAGTAGTTCC+TGG + chr1_4:2286878-2286897 Msa0143360:CDS 50.0%
TCCGGTTCCAGTTCCAAATC+TGG + chr1_4:2287474-2287493 Msa0143360:intron 50.0%
! ATCAGTTCGTATGGGTGCTG+TGG - chr1_4:2287715-2287734 None:intergenic 50.0%
! TGCTCCTCATGGTTCGGATA+TGG - chr1_4:2287817-2287836 None:intergenic 50.0%
TCATGGTGCTCCTCATGGTT+CGG - chr1_4:2287823-2287842 None:intergenic 50.0%
!! CTGTAGTGGTGCTACTGAAG+TGG - chr1_4:2287977-2287996 None:intergenic 50.0%
AGTAGCACCACTACAGAACG+TGG + chr1_4:2287981-2288000 Msa0143360:intron 50.0%
ATCTCTGCCACGTTCTGTAG+TGG - chr1_4:2287991-2288010 None:intergenic 50.0%
AAAGACGAAGGAGTTGGCGA+GGG - chr1_4:2288298-2288317 None:intergenic 50.0%
GACATGTGGAGTGAGACAGA+TGG + chr1_4:2288765-2288784 Msa0143360:intron 50.0%
GACATGTGGAGTGAGACAGA+TGG + chr1_4:2288765-2288784 Msa0143360:intron 50.0%
!! CATGGAGAAGTACTGGTACC+GGG + chr1_4:2289237-2289256 Msa0143360:intron 50.0%
TTACGTACCAGTACCCGTAC+CGG + chr1_4:2289543-2289562 Msa0143360:intron 50.0%
ATGATGCATAGGTACGGGTG+CGG - chr1_4:2289572-2289591 None:intergenic 50.0%
CACTTTCCTGGATCAGGGTA+TGG - chr1_4:2290481-2290500 None:intergenic 50.0%
GCATAAACGAGGAAGGAACG+AGG - chr1_4:2291331-2291350 None:intergenic 50.0%
TGCACCTTGTAGAACAGCAG+TGG + chr1_4:2291348-2291367 Msa0143360:CDS 50.0%
GAGCCAGTTGAACTGTCAGT+TGG + chr1_4:2291400-2291419 Msa0143360:CDS 50.0%
GTGCATGTGTATGCCTTGCT+AGG + chr1_4:2291649-2291668 Msa0143360:three_prime_UTR 50.0%
! GGAACCTTTGCCATTTGCCA+CGG + chr1_4:2291976-2291995 Msa0143360:three_prime_UTR 50.0%
! GAACCTTTGCCATTTGCCAC+GGG + chr1_4:2291977-2291996 Msa0143360:three_prime_UTR 50.0%
AAGCACCTGTGCATCCTCTG+AGG - chr1_4:2273617-2273636 None:intergenic 55.0%
GTGTGTAGGCAGCATGCACT+TGG + chr1_4:2274313-2274332 Msa0143360:intron 55.0%
AGAGAGGTCGGGGATGACAA+AGG + chr1_4:2274585-2274604 Msa0143360:CDS 55.0%
CCAGGTGGAGGAATGACCTT+AGG - chr1_4:2274705-2274724 None:intergenic 55.0%
CCTAAGGTCATTCCTCCACC+TGG + chr1_4:2274702-2274721 Msa0143360:CDS 55.0%
TATGACACAGAAGGGAGGGG+GGG - chr1_4:2275858-2275877 None:intergenic 55.0%
AAGGTCACGGGTTCAAGTCC+TGG + chr1_4:2276281-2276300 Msa0143360:intron 55.0%
CTGAAGCTCCCGCATATGCA+GGG - chr1_4:2276376-2276395 None:intergenic 55.0%
ACTGAAGCTCCCGCATATGC+AGG - chr1_4:2276377-2276396 None:intergenic 55.0%
ACTTACAGAGAGTGGGCACC+TGG + chr1_4:2276637-2276656 Msa0143360:CDS 55.0%
CAATAGATCCGACCCTGCCT+TGG + chr1_4:2276800-2276819 Msa0143360:intron 55.0%
AGCAGTTGAGGTCCAAGGCA+GGG - chr1_4:2276815-2276834 None:intergenic 55.0%
TAGCAGTTGAGGTCCAAGGC+AGG - chr1_4:2276816-2276835 None:intergenic 55.0%
GCCTTGGACCTCAACTGCTA+TGG + chr1_4:2276816-2276835 Msa0143360:intron 55.0%
GCCATAGCAGTTGAGGTCCA+AGG - chr1_4:2276820-2276839 None:intergenic 55.0%
TCGCAATTCGCTTCGGTACG+TGG + chr1_4:2279190-2279209 Msa0143360:intron 55.0%
TTCGCTTCGGTACGTGGTAC+GGG + chr1_4:2279196-2279215 Msa0143360:intron 55.0%
TTCGGTACGTGGTACGGGTT+CGG + chr1_4:2279201-2279220 Msa0143360:intron 55.0%
! ACGTGGGGGGTATACATAGC+CGG + chr1_4:2279256-2279275 Msa0143360:intron 55.0%
GCAGTGGATAGCTGTGGTAG+TGG - chr1_4:2279469-2279488 None:intergenic 55.0%
CACATGGCAGTGGATAGCTG+TGG - chr1_4:2279475-2279494 None:intergenic 55.0%
GCGAACTGGTGCGTACGTAT+TGG + chr1_4:2279697-2279716 Msa0143360:intron 55.0%
! GGTGCGTACGTATTGGTACG+CGG + chr1_4:2279704-2279723 Msa0143360:intron 55.0%
CGAGTTTAGAGGGGAAGGGA+GGG + chr1_4:2280661-2280680 Msa0143360:intron 55.0%
GAGTTTAGAGGGGAAGGGAG+GGG + chr1_4:2280662-2280681 Msa0143360:intron 55.0%
!! TTGGGAGAGGAGGGTTTTGG+GGG + chr1_4:2280731-2280750 Msa0143360:intron 55.0%
!!! AGGGTTTTGGGGGGTTTAGG+AGG + chr1_4:2280815-2280834 Msa0143360:intron 55.0%
!!! GGGTTTTGGGGGGTTTAGGA+GGG + chr1_4:2280816-2280835 Msa0143360:intron 55.0%
!!! AAGGAAGGGTTTTGGGGGGT+GGG - chr1_4:2280988-2281007 None:intergenic 55.0%
!! AGGGGAAGGAAGGGTTTTGG+GGG - chr1_4:2280993-2281012 None:intergenic 55.0%
! GAGGGGAAGGAAGGGTTTTG+GGG - chr1_4:2280994-2281013 None:intergenic 55.0%
! GGAGGGGAAGGAAGGGTTTT+GGG - chr1_4:2280995-2281014 None:intergenic 55.0%
TTTGGGAGTTTGGAGGGGAG+GGG - chr1_4:2281011-2281030 None:intergenic 55.0%
GTTTGGGAGTTTGGAGGGGA+GGG - chr1_4:2281012-2281031 None:intergenic 55.0%
TGTTTGGGAGTTTGGAGGGG+AGG - chr1_4:2281013-2281032 None:intergenic 55.0%
! GATTGTGGTCGCTTTGGCTG+TGG - chr1_4:2281385-2281404 None:intergenic 55.0%
ACACGTTGGGATGAGTAGCC+CGG + chr1_4:2281423-2281442 Msa0143360:CDS 55.0%
GGAGTTCCAAACCGACTGCT+AGG - chr1_4:2282271-2282290 None:intergenic 55.0%
!! CCAGGGTCGGTGCTATGATA+GGG - chr1_4:2282542-2282561 None:intergenic 55.0%
!! CCTATCATAGCACCGACCCT+GGG + chr1_4:2282540-2282559 Msa0143360:intron 55.0%
TTCCAGGACCTTGACTCCCA+GGG - chr1_4:2282559-2282578 None:intergenic 55.0%
GCATTCCCAGAGCTGGTTGT+CGG - chr1_4:2282653-2282672 None:intergenic 55.0%
!! TGGGAAAGCATTCCCAGAGC+TGG - chr1_4:2282660-2282679 None:intergenic 55.0%
AGTGGGGAGGAAGCTAGTAG+GGG - chr1_4:2283760-2283779 None:intergenic 55.0%
GAGTGGGGAGGAAGCTAGTA+GGG - chr1_4:2283761-2283780 None:intergenic 55.0%
AGAGTGGGGAGGAAGCTAGT+AGG - chr1_4:2283762-2283781 None:intergenic 55.0%
ACTTAACGCGAAGAGTGGGG+AGG - chr1_4:2283773-2283792 None:intergenic 55.0%
TGCCTTCCGACTCAAGATGG+TGG + chr1_4:2284679-2284698 Msa0143360:CDS 55.0%
GCCTTCCGACTCAAGATGGT+GGG + chr1_4:2284680-2284699 Msa0143360:CDS 55.0%
TCCCACCATCTTGAGTCGGA+AGG - chr1_4:2284684-2284703 None:intergenic 55.0%
!! CCGACTCAAGATGGTGGGAT+TGG + chr1_4:2284685-2284704 Msa0143360:CDS 55.0%
ATATGGCCGTTGCCGACAAG+TGG + chr1_4:2284725-2284744 Msa0143360:CDS 55.0%
CTAAAGCTCCCGCATACGCA+GGG - chr1_4:2285593-2285612 None:intergenic 55.0%
ACTAAAGCTCCCGCATACGC+AGG - chr1_4:2285594-2285613 None:intergenic 55.0%
! GTATGCGGGAGCTTTAGTGC+CGG + chr1_4:2285596-2285615 Msa0143360:intron 55.0%
! TATGCGGGAGCTTTAGTGCC+GGG + chr1_4:2285597-2285616 Msa0143360:intron 55.0%
!! ACTATGGGCCTTGGTGGTGA+AGG + chr1_4:2286645-2286664 Msa0143360:CDS 55.0%
!! CTATGGGCCTTGGTGGTGAA+GGG + chr1_4:2286646-2286665 Msa0143360:CDS 55.0%
GGGAATGAATTCGGCCATCC+TGG + chr1_4:2286684-2286703 Msa0143360:CDS 55.0%
ACTGGAACCGGATTCAGCAC+TGG - chr1_4:2287466-2287485 None:intergenic 55.0%
GTCAACCAGATCTGCGACTG+CGG - chr1_4:2287858-2287877 None:intergenic 55.0%
GCAGTCGCAGATCTGGTTGA+CGG + chr1_4:2287857-2287876 Msa0143360:intron 55.0%
AAGCTCAGGTAGCCACGTTG+TGG - chr1_4:2287886-2287905 None:intergenic 55.0%
GAAAGACGAAGGAGTTGGCG+AGG - chr1_4:2288299-2288318 None:intergenic 55.0%
TACCATACGCGTACCCGGTA+CGG - chr1_4:2289270-2289289 None:intergenic 55.0%
ACGAGTACCATACGCGTACC+CGG - chr1_4:2289275-2289294 None:intergenic 55.0%
TACGTACCAGTACCCGTACC+GGG + chr1_4:2289544-2289563 Msa0143360:intron 55.0%
CCTGGATCAGGGTATGGGTT+AGG - chr1_4:2290475-2290494 None:intergenic 55.0%
CCTAACCCATACCCTGATCC+AGG + chr1_4:2290472-2290491 Msa0143360:intron 55.0%
!!! ACCATTTTGGGTTCTCCCGG+TGG + chr1_4:2291244-2291263 Msa0143360:intron 55.0%
TCCACCGGGAGAACCCAAAA+TGG - chr1_4:2291248-2291267 None:intergenic 55.0%
AAACGAGGAAGGAACGAGGC+CGG - chr1_4:2291327-2291346 None:intergenic 55.0%
ACACCCGTGGCAAATGGCAA+AGG - chr1_4:2291983-2292002 None:intergenic 55.0%
TTGGGGTTGTGGGACCCACT+TGG - chr1_4:2272056-2272075 None:intergenic 60.0%
GTCATTCCTCCACCTGGTGC+TGG + chr1_4:2274708-2274727 Msa0143360:CDS 60.0%
TTCTGTCCAGCACCAGGTGG+AGG - chr1_4:2274717-2274736 None:intergenic 60.0%
TGCTCCACGAGGGGTAACCT+TGG + chr1_4:2276226-2276245 Msa0143360:intron 60.0%
AGGGGTAACCTTGGCGCAAC+TGG + chr1_4:2276235-2276254 Msa0143360:intron 60.0%
! CCAAATGGTGGGACCCTTCC+CGG + chr1_4:2276349-2276368 Msa0143360:intron 60.0%
GCATATGCAGGGTCCGGGAA+GGG - chr1_4:2276365-2276384 None:intergenic 60.0%
CTTCCCGGACCCTGCATATG+CGG + chr1_4:2276364-2276383 Msa0143360:intron 60.0%
TTCCCGGACCCTGCATATGC+GGG + chr1_4:2276365-2276384 Msa0143360:intron 60.0%
ATGCGGGAGCTTCAGTGCAC+CGG + chr1_4:2276381-2276400 Msa0143360:intron 60.0%
AGAGTGGGCACCTGGAGCTA+AGG + chr1_4:2276645-2276664 Msa0143360:CDS 60.0%
GTTGAGGTCCAAGGCAGGGT+CGG - chr1_4:2276811-2276830 None:intergenic 60.0%
TCGGTACGTGGTACGGGTTC+GGG + chr1_4:2279202-2279221 Msa0143360:intron 60.0%
AAGAGTGGGCCAGTGGCGTT+TGG + chr1_4:2279516-2279535 Msa0143360:intron 60.0%
GCGAGTTTAGAGGGGAAGGG+AGG + chr1_4:2280660-2280679 Msa0143360:intron 60.0%
! GGGAAGGGAGGGGAGAGTTT+TGG + chr1_4:2280672-2280691 Msa0143360:intron 60.0%
!!! TGGGAGAGGAGGGTTTTGGG+GGG + chr1_4:2280732-2280751 Msa0143360:intron 60.0%
!!! GAAGGAAGGGTTTTGGGGGG+TGG - chr1_4:2280989-2281008 None:intergenic 60.0%
!!! GGGGAAGGAAGGGTTTTGGG+GGG - chr1_4:2280992-2281011 None:intergenic 60.0%
! GGGAGGGGAAGGAAGGGTTT+TGG - chr1_4:2280996-2281015 None:intergenic 60.0%
TTGGAGGGGAGGGGAAGGAA+GGG - chr1_4:2281002-2281021 None:intergenic 60.0%
TTTGGAGGGGAGGGGAAGGA+AGG - chr1_4:2281003-2281022 None:intergenic 60.0%
!! CCCTATCATAGCACCGACCC+TGG + chr1_4:2282539-2282558 Msa0143360:intron 60.0%
!! CCCAGGGTCGGTGCTATGAT+AGG - chr1_4:2282543-2282562 None:intergenic 60.0%
AGGACCTTGACTCCCAGGGT+CGG - chr1_4:2282555-2282574 None:intergenic 60.0%
CTTCCAGGACCTTGACTCCC+AGG - chr1_4:2282560-2282579 None:intergenic 60.0%
AGAGCTGGTTGTCGGTGGGT+TGG - chr1_4:2282645-2282664 None:intergenic 60.0%
AACCCACCGACAACCAGCTC+TGG + chr1_4:2282644-2282663 Msa0143360:intron 60.0%
ACCCACCGACAACCAGCTCT+GGG + chr1_4:2282645-2282664 Msa0143360:intron 60.0%
TCCCAGAGCTGGTTGTCGGT+GGG - chr1_4:2282649-2282668 None:intergenic 60.0%
TTCCCAGAGCTGGTTGTCGG+TGG - chr1_4:2282650-2282669 None:intergenic 60.0%
AAGGGGAGGCCTTGGCACAA+CGG + chr1_4:2285465-2285484 Msa0143360:intron 60.0%
CATACGCAGGGTTCGGGAAG+GGG - chr1_4:2285581-2285600 None:intergenic 60.0%
GCATACGCAGGGTTCGGGAA+GGG - chr1_4:2285582-2285601 None:intergenic 60.0%
CTTCCCGAACCCTGCGTATG+CGG + chr1_4:2285581-2285600 Msa0143360:intron 60.0%
TTCCCGAACCCTGCGTATGC+GGG + chr1_4:2285582-2285601 Msa0143360:intron 60.0%
GTGGCTCATGGTGCTCCTCA+TGG - chr1_4:2287828-2287847 None:intergenic 60.0%
CTCAGGTAGCCACGTTGTGG+CGG - chr1_4:2287883-2287902 None:intergenic 60.0%
GCAACAGAGATCGGGGATGC+TGG - chr1_4:2287944-2287963 None:intergenic 60.0%
ACCATACGCGTACCCGGTAC+GGG - chr1_4:2289269-2289288 None:intergenic 60.0%
ATAGGTACGGGTGCGGTACC+CGG - chr1_4:2289565-2289584 None:intergenic 60.0%
GCTGCTACACCCGTGGCAAA+TGG - chr1_4:2291989-2292008 None:intergenic 60.0%
ACACAGAAGGGAGGGGGGGA+GGG - chr1_4:2275854-2275873 None:intergenic 65.0%
TGCGCCAAGGTTACCCCTCG+TGG - chr1_4:2276233-2276252 None:intergenic 65.0%
CCGGGAAGGGTCCCACCATT+TGG - chr1_4:2276352-2276371 None:intergenic 65.0%
CGCATATGCAGGGTCCGGGA+AGG - chr1_4:2276366-2276385 None:intergenic 65.0%
CTCCCGCATATGCAGGGTCC+GGG - chr1_4:2276370-2276389 None:intergenic 65.0%
GCTCCCGCATATGCAGGGTC+CGG - chr1_4:2276371-2276390 None:intergenic 65.0%
TGCGGGAGCTTCAGTGCACC+GGG + chr1_4:2276382-2276401 Msa0143360:intron 65.0%
GCATGGGAAGCTCAGCACCC+TGG + chr1_4:2278738-2278757 Msa0143360:intron 65.0%
TGGGAAGCTCAGCACCCTGG+AGG + chr1_4:2278741-2278760 Msa0143360:intron 65.0%
GGGAAGCTCAGCACCCTGGA+GGG + chr1_4:2278742-2278761 Msa0143360:intron 65.0%
GTGGTACGGGTTCGGGTACG+TGG + chr1_4:2279209-2279228 Msa0143360:intron 65.0%
GGAGTTTGGAGGGGAGGGGA+AGG - chr1_4:2281007-2281026 None:intergenic 65.0%
!! AGCACCGACCCTGGGAGTCA+AGG + chr1_4:2282548-2282567 Msa0143360:intron 65.0%
GACCCTGGGAGTCAAGGTCC+TGG + chr1_4:2282554-2282573 Msa0143360:intron 65.0%
CGCATACGCAGGGTTCGGGA+AGG - chr1_4:2285583-2285602 None:intergenic 65.0%
CTCCCGCATACGCAGGGTTC+GGG - chr1_4:2285587-2285606 None:intergenic 65.0%
GCTCCCGCATACGCAGGGTT+CGG - chr1_4:2285588-2285607 None:intergenic 65.0%
TGCGGCTTCGTGGTGGCTCA+TGG - chr1_4:2287840-2287859 None:intergenic 65.0%
GATCTGCGACTGCGGCTTCG+TGG - chr1_4:2287850-2287869 None:intergenic 65.0%
CGAAGCCGCAGTCGCAGATC+TGG + chr1_4:2287850-2287869 Msa0143360:intron 65.0%
TACCGGGTACGCACCCGTAC+CGG + chr1_4:2289253-2289272 Msa0143360:intron 65.0%
ACCCGTACCGGGTACGCGTA+TGG + chr1_4:2289265-2289284 Msa0143360:intron 65.0%
TACGGGTGCGGTACCCGGTA+CGG - chr1_4:2289560-2289579 None:intergenic 65.0%
GCGATCGCCACCGCGTAAGC+TGG - chr1_4:2272438-2272457 None:intergenic 70.0%
ACAGAAGGGAGGGGGGGAGG+GGG - chr1_4:2275852-2275871 None:intergenic 70.0%
CACAGAAGGGAGGGGGGGAG+GGG - chr1_4:2275853-2275872 None:intergenic 70.0%
GACACAGAAGGGAGGGGGGG+AGG - chr1_4:2275855-2275874 None:intergenic 70.0%
CTGCGACTGCGGCTTCGTGG+TGG - chr1_4:2287847-2287866 None:intergenic 70.0%
GGTTGACGGCCGCCACAACG+TGG + chr1_4:2287871-2287890 Msa0143360:intron 70.0%
ACCGGGTACGCACCCGTACC+GGG + chr1_4:2289254-2289273 Msa0143360:intron 70.0%
ACCCGGTACGGGTGCGTACC+CGG - chr1_4:2289258-2289277 None:intergenic 70.0%
GCGGTACCCGGTACGGGTAC+TGG - chr1_4:2289553-2289572 None:intergenic 70.0%
ACGGGTGCGGTACCCGGTAC+GGG - chr1_4:2289559-2289578 None:intergenic 70.0%
GTGCGCTGCTGCTACACCCG+TGG - chr1_4:2291996-2292015 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 2272043 2292145 2272043 ID=Msa0143360;Name=Msa0143360
chr1_4 mRNA 2272043 2292145 2272043 ID=Msa0143360-mRNA-1;Parent=Msa0143360;Name=Msa0143360-mRNA-1;_AED=0.02;_eAED=0.02;_QI=337|1|1|1|0.90|0.95|22|677|877
chr1_4 exon 2272043 2272512 2272043 ID=Msa0143360-mRNA-1:exon:985;Parent=Msa0143360-mRNA-1
chr1_4 exon 2273476 2273630 2273476 ID=Msa0143360-mRNA-1:exon:986;Parent=Msa0143360-mRNA-1
chr1_4 exon 2274510 2274790 2274510 ID=Msa0143360-mRNA-1:exon:987;Parent=Msa0143360-mRNA-1
chr1_4 exon 2275718 2275816 2275718 ID=Msa0143360-mRNA-1:exon:988;Parent=Msa0143360-mRNA-1
chr1_4 exon 2276624 2276666 2276624 ID=Msa0143360-mRNA-1:exon:989;Parent=Msa0143360-mRNA-1
chr1_4 exon 2277584 2277643 2277584 ID=Msa0143360-mRNA-1:exon:990;Parent=Msa0143360-mRNA-1
chr1_4 exon 2278059 2278139 2278059 ID=Msa0143360-mRNA-1:exon:991;Parent=Msa0143360-mRNA-1
chr1_4 exon 2279973 2280089 2279973 ID=Msa0143360-mRNA-1:exon:992;Parent=Msa0143360-mRNA-1
chr1_4 exon 2281361 2281444 2281361 ID=Msa0143360-mRNA-1:exon:993;Parent=Msa0143360-mRNA-1
chr1_4 exon 2281925 2282046 2281925 ID=Msa0143360-mRNA-1:exon:994;Parent=Msa0143360-mRNA-1
chr1_4 exon 2282243 2282362 2282243 ID=Msa0143360-mRNA-1:exon:995;Parent=Msa0143360-mRNA-1
chr1_4 exon 2283007 2283136 2283007 ID=Msa0143360-mRNA-1:exon:996;Parent=Msa0143360-mRNA-1
chr1_4 exon 2283240 2283350 2283240 ID=Msa0143360-mRNA-1:exon:997;Parent=Msa0143360-mRNA-1
chr1_4 exon 2284339 2284467 2284339 ID=Msa0143360-mRNA-1:exon:998;Parent=Msa0143360-mRNA-1
chr1_4 exon 2284658 2284761 2284658 ID=Msa0143360-mRNA-1:exon:999;Parent=Msa0143360-mRNA-1
chr1_4 exon 2286028 2286172 2286028 ID=Msa0143360-mRNA-1:exon:1000;Parent=Msa0143360-mRNA-1
chr1_4 exon 2286558 2286705 2286558 ID=Msa0143360-mRNA-1:exon:1001;Parent=Msa0143360-mRNA-1
chr1_4 exon 2286843 2286943 2286843 ID=Msa0143360-mRNA-1:exon:1002;Parent=Msa0143360-mRNA-1
chr1_4 exon 2289766 2289843 2289766 ID=Msa0143360-mRNA-1:exon:1003;Parent=Msa0143360-mRNA-1
chr1_4 exon 2290186 2290341 2290186 ID=Msa0143360-mRNA-1:exon:1004;Parent=Msa0143360-mRNA-1
chr1_4 exon 2290772 2290846 2290772 ID=Msa0143360-mRNA-1:exon:1005;Parent=Msa0143360-mRNA-1
chr1_4 exon 2291307 2292145 2291307 ID=Msa0143360-mRNA-1:exon:1006;Parent=Msa0143360-mRNA-1
chr1_4 five_prime_UTR 2272043 2272379 2272043 ID=Msa0143360-mRNA-1:five_prime_utr;Parent=Msa0143360-mRNA-1
chr1_4 CDS 2272380 2272512 2272380 ID=Msa0143360-mRNA-1:cds;Parent=Msa0143360-mRNA-1
chr1_4 CDS 2273476 2273630 2273476 ID=Msa0143360-mRNA-1:cds;Parent=Msa0143360-mRNA-1
chr1_4 CDS 2274510 2274790 2274510 ID=Msa0143360-mRNA-1:cds;Parent=Msa0143360-mRNA-1
chr1_4 CDS 2275718 2275816 2275718 ID=Msa0143360-mRNA-1:cds;Parent=Msa0143360-mRNA-1
chr1_4 CDS 2276624 2276666 2276624 ID=Msa0143360-mRNA-1:cds;Parent=Msa0143360-mRNA-1
chr1_4 CDS 2277584 2277643 2277584 ID=Msa0143360-mRNA-1:cds;Parent=Msa0143360-mRNA-1
chr1_4 CDS 2278059 2278139 2278059 ID=Msa0143360-mRNA-1:cds;Parent=Msa0143360-mRNA-1
chr1_4 CDS 2279973 2280089 2279973 ID=Msa0143360-mRNA-1:cds;Parent=Msa0143360-mRNA-1
chr1_4 CDS 2281361 2281444 2281361 ID=Msa0143360-mRNA-1:cds;Parent=Msa0143360-mRNA-1
chr1_4 CDS 2281925 2282046 2281925 ID=Msa0143360-mRNA-1:cds;Parent=Msa0143360-mRNA-1
chr1_4 CDS 2282243 2282362 2282243 ID=Msa0143360-mRNA-1:cds;Parent=Msa0143360-mRNA-1
chr1_4 CDS 2283007 2283136 2283007 ID=Msa0143360-mRNA-1:cds;Parent=Msa0143360-mRNA-1
chr1_4 CDS 2283240 2283350 2283240 ID=Msa0143360-mRNA-1:cds;Parent=Msa0143360-mRNA-1
chr1_4 CDS 2284339 2284467 2284339 ID=Msa0143360-mRNA-1:cds;Parent=Msa0143360-mRNA-1
chr1_4 CDS 2284658 2284761 2284658 ID=Msa0143360-mRNA-1:cds;Parent=Msa0143360-mRNA-1
chr1_4 CDS 2286028 2286172 2286028 ID=Msa0143360-mRNA-1:cds;Parent=Msa0143360-mRNA-1
chr1_4 CDS 2286558 2286705 2286558 ID=Msa0143360-mRNA-1:cds;Parent=Msa0143360-mRNA-1
chr1_4 CDS 2286843 2286943 2286843 ID=Msa0143360-mRNA-1:cds;Parent=Msa0143360-mRNA-1
chr1_4 CDS 2289766 2289843 2289766 ID=Msa0143360-mRNA-1:cds;Parent=Msa0143360-mRNA-1
chr1_4 CDS 2290186 2290341 2290186 ID=Msa0143360-mRNA-1:cds;Parent=Msa0143360-mRNA-1
chr1_4 CDS 2290772 2290846 2290772 ID=Msa0143360-mRNA-1:cds;Parent=Msa0143360-mRNA-1
chr1_4 CDS 2291307 2291468 2291307 ID=Msa0143360-mRNA-1:cds;Parent=Msa0143360-mRNA-1
chr1_4 three_prime_UTR 2291469 2292145 2291469 ID=Msa0143360-mRNA-1:three_prime_utr;Parent=Msa0143360-mRNA-1
Gene Sequence

>Msa0143360

ATGGTTTATACCATTTCAGGAATTCGATTTCCCGTTGTTCCTTCTCTGAATAAGTCCAGCTTACGCGGTGGCGATCGCAGAACTTCTTCTTCTCACTCCTTCTTTCTCAAGAAGAATTCCTCATCATTCTCGAAGACTTCCCTATATGCAAAATTTTCTCATGATTCTGAAACCAAATCTTCCACAATTGCTGAATCTGATAAAGTACTTATTCCTGAAGATCAAGATAACTCAGCATCCGTGACAGATCAACTAGAAAATCCTGATATAACCTCAGAGGATGCACAGTCTTTTCAGAACTTGGAGGATTTAACCATGAAAGATGAGAATAAGTACAATGTTGATGAAGCAGCTAGCAGTTATAGAGAGGTCGGGGATGACAAAGGTTCTGTTATGTCATCATCACTTGTGGATGTTAACACTGACGCTCAAGCCAAGAAGACATCGGTTCATTCAGACAAGAAAGTAAAAACAGATAAACCTAAGGTCATTCCTCCACCTGGTGCTGGACAGAAAATATATGAGATTGATACATTTTTACAAGCTCACCGTCAGCATCTTGATTTCCGCTATGGACAGTACAAAAAAATTCGGGAGGAAATTGACAAGTATGAAGGTGGTCTTGATGCATTTTCTCGTGGGTACGAAAAGTTAGGCTTCACACGCAGTGCTACAGGCATTACTTACAGAGAGTGGGCACCTGGAGCTAAGTCAGCAGCATTAGTTGGAGATTTCAACAATTGGAATCCAAATGCAGATGTAATGACCCGGGACGATTTTGGTGTGTGGGAGATCTTCTTGCCAAATAATGCCGATGGTTCACCACCAATTCCTCATGGTTCTCGAGTCAAGATCCACATGGATACACCCTCTGGAATCAAGGACTCAATTCCTGCTTGGATCAAATTCTCTGTACAGGCTCCTGGTGAAATTCCATATAATGGAATATACTATGATCCCCCAGAGGAGGAAAAATATGTCTTCAAACATCCACAGCCAAAGCGACCACAATCAATTAGGATATATGAGGCACACGTTGGGATGAGTAGCCCGGAGCCAAAAATCAACACATATGCCAATTTTAGAGATGATGTACTGCCTCGCATTAAAAAGCTTGGCTATAATGCTGTTCAGATTATGGCTATCCAAGAACATTCTTACTATGCTAGCTTTGGGTACCATGTTACTAATTTCTTTGCACCTAGCAGTCGGTTTGGAACTCCAGAAGATCTTAAGTCTCTGATAGACAGAGCCCATGAACTAGGCCTGCTTGTTCTGATGGATATTGTACATAGCCATGCATCAAGTAATACATTGGATGGCCTCAACATGTTTGATGGAACTGATGCTCATTATTTCCATTCTGGTTCACGGGGTTATCATTGGATGTGGGATTCTCGCCTTTTTAACTATGGAAGCTGGGAAGTCCTAAGGTATCTACTTTCAAATGCTAGATGGTGGCTGGATGAATATAAGTTTGATGGGTTTCGATTTGATGGTGTCACATCAATGATGTACACTCATCATGGACTGCAGGTATCTTTTACTGGAAATTACAATGAGTATTTTGGTTTTGCAACTGATGTTGAAGCTGTGGTTTACCTGATGCTTGTTAATGATCTCATTCATGGGCTCTATCCTGAAGCTGTTTCAATTGGTGAAGATGTGAGTGGAATGCCAACATTCTGCCTTCCGACTCAAGATGGTGGGATTGGCTTTAACTATCGCTTGCATATGGCCGTTGCCGACAAGTGGATTGAGCTTCTTAAGAAAAAAGATGAAGATTGGAGAATGGGTGATATAGTCCACACACTGACAAACAGAAGGTGGCTAGAAAAATGTGTGGTTTATGCTGAAAGTCATGACCAAGCCTTGGTTGGTGACAAGACACTAGCATTTTGGTTGATGGACAAGGATATGTATGACTTCATGGCTTTAGACAGACCATCTACTCCTCTAATTGATCGTGGAATTGCATTACACAAAATGATTAGGCTTATTACTATGGGCCTTGGTGGTGAAGGGTATTTAAATTTTATGGGGAATGAATTCGGCCATCCTGAGTGGATCGATTTTCCAAGGGGTGATCAACATCTTCCTAATGGCACAGTAGTTCCTGGGAATAACAACAGTTATGATAAATGCAGGCGTAGATTTGACTTGGGTGATGCAGAATATCTAAGATATCATGGAATGCAAGAATTTGATCGAGCTATGCAGCACCTAGAAGAAAGATATGGTTTCATGATTTCTGAGCACCAATATATTTCAAGGAAAAATGAAGGCGACAGAGTTATAATCTTCGAAAGGGACAACCTGGTCTTTGTATTCAATTTTCACTGGACCAACAGTTATTCAGATTACAAAGTTGGCTGTTTAAAGCCAGGGAAATATAAGATTGTCTTGGATTCAGATGAGTCCTTGTTTGGTGGCTTCAATAGGCTCAATCATACTGCTGAGTACTTCACTTCGGAAGGATGGTATGATGACCGGCCTCGTTCCTTCCTCGTTTATGCACCTTGTAGAACAGCAGTGGTATATGCTCTTGTAGATGGGGTTGAATCAGAGCCAGTTGAACTGTCAGTTGGAGTTGAATCAGAGACAATTCAACAGTCAGTTGAAGTTGAACCCTGA
Protein sequence

>Msa0143360

MVYTISGIRFPVVPSLNKSSLRGGDRRTSSSHSFFLKKNSSSFSKTSLYAKFSHDSETKSSTIAESDKVLIPEDQDNSASVTDQLENPDITSEDAQSFQNLEDLTMKDENKYNVDEAASSYREVGDDKGSVMSSSLVDVNTDAQAKKTSVHSDKKVKTDKPKVIPPPGAGQKIYEIDTFLQAHRQHLDFRYGQYKKIREEIDKYEGGLDAFSRGYEKLGFTRSATGITYREWAPGAKSAALVGDFNNWNPNADVMTRDDFGVWEIFLPNNADGSPPIPHGSRVKIHMDTPSGIKDSIPAWIKFSVQAPGEIPYNGIYYDPPEEEKYVFKHPQPKRPQSIRIYEAHVGMSSPEPKINTYANFRDDVLPRIKKLGYNAVQIMAIQEHSYYASFGYHVTNFFAPSSRFGTPEDLKSLIDRAHELGLLVLMDIVHSHASSNTLDGLNMFDGTDAHYFHSGSRGYHWMWDSRLFNYGSWEVLRYLLSNARWWLDEYKFDGFRFDGVTSMMYTHHGLQVSFTGNYNEYFGFATDVEAVVYLMLVNDLIHGLYPEAVSIGEDVSGMPTFCLPTQDGGIGFNYRLHMAVADKWIELLKKKDEDWRMGDIVHTLTNRRWLEKCVVYAESHDQALVGDKTLAFWLMDKDMYDFMALDRPSTPLIDRGIALHKMIRLITMGLGGEGYLNFMGNEFGHPEWIDFPRGDQHLPNGTVVPGNNNSYDKCRRRFDLGDAEYLRYHGMQEFDRAMQHLEERYGFMISEHQYISRKNEGDRVIIFERDNLVFVFNFHWTNSYSDYKVGCLKPGKYKIVLDSDESLFGGFNRLNHTAEYFTSEGWYDDRPRSFLVYAPCRTAVVYALVDGVESEPVELSVGVESETIQQSVEVEP*