AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0708230

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0708230 MtrunA17_Chr8g0391121 90.743 821 39 2 3 786 2 822 0.0 1513
Msa0708230 MtrunA17_Chr6g0484401 69.193 818 201 8 3 776 2 812 0.0 1109
Msa0708230 MtrunA17_Chr2g0313621 31.034 116 75 2 577 688 285 399 9.26e-13 72.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0708230 AT3G18370.1 53.545 818 322 9 5 780 7 808 0.0 822
Msa0708230 AT1G05500.2 26.214 309 182 11 424 687 98 405 1.04e-18 89.7
Msa0708230 AT1G05500.1 26.214 309 182 11 424 687 242 549 1.62e-18 90.5
Msa0708230 AT3G14590.2 31.818 110 70 2 583 688 289 397 2.91e-12 70.9
Msa0708230 AT3G14590.3 31.818 110 70 2 583 688 258 366 3.22e-12 70.9
Msa0708230 AT3G14590.1 31.818 110 70 2 583 688 244 352 3.26e-12 70.5
Msa0708230 AT3G14590.4 30.328 122 80 2 583 700 201 321 3.30e-12 70.5
Msa0708230 AT3G14590.5 30.328 122 80 2 583 700 203 323 3.48e-12 70.5
Msa0708230 AT1G53590.1 32.727 110 69 2 583 688 288 396 4.37e-12 70.5

Find 226 sgRNAs with CRISPR-Local

Find 462 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGAAGCTTCTTCCAAATTAT+TGG 0.132238 4_4:+81699300 None:intergenic
TTTATGAACCACAGAGAAAT+TGG 0.176310 4_4:-81699516 Msa0708230:five_prime_UTR
TTTGATCATTACCAATAATT+TGG 0.180864 4_4:-81699311 Msa0708230:CDS
GACTTAAAATAGAAGCAATT+TGG 0.181599 4_4:-81694713 Msa0708230:CDS
GTTTGCCTGCAGTTGATTTA+AGG 0.188371 4_4:-81697450 Msa0708230:CDS
GCAAAGAGAAGAAGGATAAT+TGG 0.199824 4_4:+81699157 None:intergenic
GATTAACAGTCTTCATATTA+AGG 0.202883 4_4:-81698170 Msa0708230:CDS
AAGCTTAGGATTAAAATAAT+TGG 0.210272 4_4:+81698803 None:intergenic
TTTGCTTCACTTTCACTAAT+TGG 0.211318 4_4:+81699263 None:intergenic
ATATATGTTTCAGTGATTTC+TGG 0.224641 4_4:-81697406 Msa0708230:CDS
TGTGGTTCATAAATTCTTCT+TGG 0.234805 4_4:+81699526 None:intergenic
TTGACAGCGACTCCTGAAAA+TGG 0.243030 4_4:-81698266 Msa0708230:intron
CCTAGCATCTTGTGAAATTA+AGG 0.272929 4_4:-81697125 Msa0708230:intron
GATTGTCTTGTTTGAATCTC+TGG 0.272946 4_4:+81693994 None:intergenic
ATGGGATACGACATTTAATA+TGG 0.276237 4_4:-81697221 Msa0708230:CDS
TTTCTGGAAACAAACTTTCT+AGG 0.288787 4_4:-81697390 Msa0708230:CDS
CACTAAAGCATTTCACAATT+AGG 0.290537 4_4:+81694853 None:intergenic
CCTCCCAGTTTGGGCCTTCA+AGG 0.291000 4_4:-81698469 Msa0708230:CDS
TGGTAGTGCACATGTAAATT+TGG 0.295602 4_4:-81694805 Msa0708230:CDS
TCAACAATTGTGTGGGCAAT+AGG 0.296961 4_4:-81696134 Msa0708230:CDS
ATATTGTACCTCTGCTGATT+TGG 0.304222 4_4:+81696034 None:intergenic
TGGATCACGCCCTCCCAGTT+TGG 0.307725 4_4:-81698479 Msa0708230:CDS
AGAAATGAATATTCATAATA+TGG 0.312568 4_4:+81699458 None:intergenic
ATCTATTGTTGTCACAAATA+TGG 0.313272 4_4:-81698827 Msa0708230:CDS
CTTATTGCTGCTGATCTTAG+AGG 0.322823 4_4:-81694496 Msa0708230:CDS
TATCAGCAAAATAAATGAAC+TGG 0.337446 4_4:-81693325 Msa0708230:CDS
GGATCACGCCCTCCCAGTTT+GGG 0.338838 4_4:-81698478 Msa0708230:CDS
CTTGATGCAAAAGACAGATT+TGG 0.340577 4_4:-81695172 Msa0708230:CDS
GTGGTTCATAAATTCTTCTT+GGG 0.353237 4_4:+81699527 None:intergenic
TGGGCAATAGGGCCTGATTC+TGG 0.355523 4_4:-81696122 Msa0708230:CDS
CCATACTGCAACTTAATGTA+AGG 0.356510 4_4:+81695139 None:intergenic
AAGACTGTTAATCACAATTC+TGG 0.357434 4_4:+81698180 None:intergenic
GACTGGTACAAGGGTCAATC+AGG 0.359705 4_4:-81694779 Msa0708230:CDS
CGGAAATTTCACCTCTACTA+TGG 0.360153 4_4:+81698764 None:intergenic
TTTAATAGTGGATGGAAATC+TGG 0.369312 4_4:-81693439 Msa0708230:CDS
ACTTAAAATAGAAGCAATTT+GGG 0.369605 4_4:-81694712 Msa0708230:CDS
GCCTGGTGTTTCTCCTTGGC+TGG 0.370816 4_4:-81697782 Msa0708230:intron
AGGAGAACAGGTGTGCGTTT+TGG 0.372091 4_4:-81697256 Msa0708230:CDS
TTCTTACTGCTACTCATTGC+AGG 0.372497 4_4:+81699337 None:intergenic
TGGGCCTTCAAGGGATTAGA+TGG 0.373329 4_4:-81698459 Msa0708230:CDS
CCTTACATTAAGTTGCAGTA+TGG 0.376835 4_4:-81695139 Msa0708230:CDS
TCATAAATTCTTCTTGGGTT+CGG 0.380080 4_4:+81699532 None:intergenic
AAAGATTCGGTCTTTAATAG+TGG 0.380863 4_4:-81693451 Msa0708230:CDS
AATCCCTTGAAGGCCCAAAC+TGG 0.381812 4_4:+81698465 None:intergenic
GGTCCTTTACATGCAATGTC+AGG 0.385025 4_4:+81694160 None:intergenic
ATCTTACCTGGCTAGGAATC+TGG 0.389714 4_4:+81693938 None:intergenic
TTTGCTATTACACCAGAATC+AGG 0.393362 4_4:+81696110 None:intergenic
TAGTCATACTTCACACTGTC+AGG 0.393443 4_4:+81697148 None:intergenic
GCATTTGCTCAGTCTCCAAC+TGG 0.398746 4_4:+81693352 None:intergenic
ATGGTCAACCTCTGGTGATC+AGG 0.399087 4_4:-81698440 Msa0708230:intron
AGGAGGACTTGAACAAGAAA+TGG 0.399481 4_4:-81698997 Msa0708230:CDS
GTCAAAGAAGGTACAGAGTC+TGG 0.400907 4_4:+81693970 None:intergenic
ATTAACAGTCTTCATATTAA+GGG 0.404294 4_4:-81698169 Msa0708230:CDS
CAGACAGCAGTTGGAGTAGT+AGG 0.407160 4_4:+81694918 None:intergenic
TCAATACTCACTATAAATCT+TGG 0.408027 4_4:+81698634 None:intergenic
CCACTTGAAGGAGTGAGTTC+TGG 0.410382 4_4:-81694744 Msa0708230:CDS
TTGTTTGGCTTATTCACAAA+TGG 0.411026 4_4:-81699204 Msa0708230:CDS
GTCATTATTACAATCATCAA+TGG 0.418319 4_4:+81693040 None:intergenic
GCAGGAAAGGGTTGAAGTGC+TGG 0.418455 4_4:-81698512 Msa0708230:intron
AAGGATAATTGGAAGGCAAT+TGG 0.423891 4_4:+81699168 None:intergenic
AGTTGCCTGGTGTTTCTCCT+TGG 0.424831 4_4:-81697786 Msa0708230:CDS
GAAAAGAAAAGAAAAGAGAA+AGG 0.427903 4_4:+81699490 None:intergenic
CTACTACTCCAACTGCTGTC+TGG 0.428303 4_4:-81694917 Msa0708230:CDS
TATACTGCAAATGTATTTGA+AGG 0.428456 4_4:-81693015 Msa0708230:three_prime_UTR
GATAACCTTGTTGAAAGCTT+AGG 0.429137 4_4:+81698789 None:intergenic
TTCAAGGGGAGGCAACAAAA+TGG 0.429566 4_4:-81697361 Msa0708230:CDS
CAACAATTGTGTGGGCAATA+GGG 0.436310 4_4:-81696133 Msa0708230:CDS
AGCATACCTTTGATCCCTCT+TGG 0.438342 4_4:+81694682 None:intergenic
CTGACGTCTGGTTCGGAGGA+AGG 0.439433 4_4:+81694082 None:intergenic
CACTTGTCTGACGTCTGGTT+CGG 0.442433 4_4:+81694075 None:intergenic
CTCCCAGTTTGGGCCTTCAA+GGG 0.443301 4_4:-81698468 Msa0708230:CDS
GAGAAGAATTTATGATCTCT+TGG 0.445073 4_4:+81693301 None:intergenic
CAGGCAACTCAGTGGCTGAT+TGG 0.445771 4_4:+81697800 None:intergenic
ACTTTCTAGGAGTTGCTTCA+AGG 0.450247 4_4:-81697377 Msa0708230:CDS
GTTAGAATAGGAATTGCCTT+TGG 0.450508 4_4:-81697835 Msa0708230:CDS
CCATAGTTTACCCTCACAAA+AGG 0.451988 4_4:+81694463 None:intergenic
GAAATGCTTGTCCCATTTGA+GGG 0.454938 4_4:-81696059 Msa0708230:CDS
AGTGTGAATGTATTATCAAT+TGG 0.456133 4_4:-81692978 Msa0708230:three_prime_UTR
TAGGAATTGCCTTTGGAAGC+GGG 0.463344 4_4:-81697828 Msa0708230:CDS
TCAATTTCCACTTCCGTTGA+GGG 0.463778 4_4:+81693275 None:intergenic
ATGTGGGTAGTAAAGCATTA+TGG 0.465652 4_4:+81694139 None:intergenic
TCACGTAGTGTTTGTAAGAA+TGG 0.465851 4_4:-81693157 Msa0708230:three_prime_UTR
TCCATCATCTAGGAACTCTA+AGG 0.471854 4_4:+81694188 None:intergenic
TGAAAGTGAAGCAAAATTCA+CGG 0.473775 4_4:-81699255 Msa0708230:CDS
GAGGAGCTGACAAGGAGAAC+AGG 0.474710 4_4:-81697268 Msa0708230:CDS
TATTTGAAGGGAATTGAGTA+AGG 0.475831 4_4:-81693002 Msa0708230:three_prime_UTR
TGAAATGCTTGTCCCATTTG+AGG 0.476657 4_4:-81696060 Msa0708230:CDS
TGACAGCGACTCCTGAAAAT+GGG 0.479324 4_4:-81698265 Msa0708230:intron
ACCTTAGAGTTCCTAGATGA+TGG 0.483274 4_4:-81694189 Msa0708230:CDS
CAAAACTGTCAACCCTCGTT+GGG 0.484234 4_4:-81694217 Msa0708230:CDS
ATAGTGGTATGACACTAATC+AGG 0.486631 4_4:+81693251 None:intergenic
ATTACACCAGATTCCTAGCC+AGG 0.486968 4_4:-81693944 Msa0708230:intron
TCTCCATCCCTCAACGGAAG+TGG 0.489394 4_4:-81693282 Msa0708230:CDS
CAAGATAATCTTACCTGGCT+AGG 0.489913 4_4:+81693931 None:intergenic
GCAAAACATGCAAAGTTATG+TGG 0.493121 4_4:-81696092 Msa0708230:CDS
TCTACACCTGAGGTTAGAAT+AGG 0.496065 4_4:-81697847 Msa0708230:CDS
TTATGAACCACAGAGAAATT+GGG 0.498271 4_4:-81699515 Msa0708230:five_prime_UTR
ATCAATTTCCACTTCCGTTG+AGG 0.498395 4_4:+81693274 None:intergenic
CTGCAGGCAAACTGAAACAG+CGG 0.498690 4_4:+81697461 None:intergenic
GATTTAAGGAAGTATGCTGT+TGG 0.500240 4_4:-81697436 Msa0708230:CDS
ATAGGAATTGCCTTTGGAAG+CGG 0.505307 4_4:-81697829 Msa0708230:CDS
CAACAAAATGGCACAAGTAA+TGG 0.505516 4_4:-81697349 Msa0708230:CDS
TTGACCATCTAATCCCTTGA+AGG 0.505697 4_4:+81698455 None:intergenic
CATTGTTCCAATGTTGTGAC+AGG 0.505847 4_4:+81698861 None:intergenic
CTAATAACAATGTTAAATAG+TGG 0.508585 4_4:+81693235 None:intergenic
GTATCCACTTGTCTGACGTC+TGG 0.509251 4_4:+81694070 None:intergenic
CAATCAGCCACTGAGTTGCC+TGG 0.509829 4_4:-81697799 Msa0708230:CDS
GACGTATGGATCCCACTTGA+AGG 0.510497 4_4:-81694756 Msa0708230:CDS
CTTTCTAGGAGTTGCTTCAA+GGG 0.512264 4_4:-81697376 Msa0708230:CDS
GTGTAGATGCAAAGAGAAGA+AGG 0.514630 4_4:+81699149 None:intergenic
TTTGAGGTAGATGAGAATAG+TGG 0.517481 4_4:-81694885 Msa0708230:CDS
GCAATTCCTATTCTAACCTC+AGG 0.518982 4_4:+81697841 None:intergenic
ATTCGGTCTTTAATAGTGGA+TGG 0.520549 4_4:-81693447 Msa0708230:CDS
ATGGTTGCTAAGCTTTCCGT+TGG 0.521021 4_4:-81698208 Msa0708230:CDS
TCCCCTGACATTGCATGTAA+AGG 0.521441 4_4:-81694163 Msa0708230:CDS
TTAAATGTCGTATCCCATCT+TGG 0.523652 4_4:+81697226 None:intergenic
CTAGGAGTTGCTTCAAGGGG+AGG 0.523911 4_4:-81697372 Msa0708230:CDS
CATCTAGGAACTCTAAGGTC+TGG 0.524885 4_4:+81694193 None:intergenic
GGGATTAGATGGTCAACCTC+TGG 0.525778 4_4:-81698448 Msa0708230:CDS
TCAGGGGACTTCCATCATCT+AGG 0.527254 4_4:+81694178 None:intergenic
TTACTACCCACATCAAGTAT+AGG 0.528681 4_4:-81694129 Msa0708230:CDS
GTCCTTTACATGCAATGTCA+GGG 0.529283 4_4:+81694161 None:intergenic
TTTCCACTTCCGTTGAGGGA+TGG 0.530811 4_4:+81693279 None:intergenic
TGGTGTAATTTAGTCAAAGA+AGG 0.534973 4_4:+81693958 None:intergenic
AAGGGTCAATCAGGGACGTA+TGG 0.535171 4_4:-81694770 Msa0708230:CDS
ACATTCACCTATACTTGATG+TGG 0.539889 4_4:+81694122 None:intergenic
TGAGAATTGTAGTGAAAGAG+TGG 0.540272 4_4:-81695323 Msa0708230:CDS
ACATGTAAATTTGGAAGGAC+TGG 0.542178 4_4:-81694796 Msa0708230:CDS
AATTTGGAAGGACTGGTACA+AGG 0.542219 4_4:-81694789 Msa0708230:CDS
GTTGTGACACCAATACTAGA+TGG 0.544685 4_4:-81697895 Msa0708230:CDS
CACAATTCTGGCAGTACCAA+CGG 0.547971 4_4:+81698192 None:intergenic
CCTTAATTTCACAAGATGCT+AGG 0.548400 4_4:+81697125 None:intergenic
AACTTGTTCTTATTGAAGCG+AGG 0.551264 4_4:-81694522 Msa0708230:CDS
ATCCCTTGAAGGCCCAAACT+GGG 0.552497 4_4:+81698466 None:intergenic
TAGAAGCGGAGGAGCTGACA+AGG 0.553685 4_4:-81697276 Msa0708230:CDS
TACTTCCTTAAATCAACTGC+AGG 0.555104 4_4:+81697445 None:intergenic
CATCGGGCATGACGAATGGT+TGG 0.555212 4_4:-81694549 Msa0708230:CDS
ATTTGGAAGGACTGGTACAA+GGG 0.556965 4_4:-81694788 Msa0708230:CDS
AAATGCTTGTCCCATTTGAG+GGG 0.558460 4_4:-81696058 Msa0708230:CDS
CTATATCATTATACAGATTG+TGG 0.559243 4_4:+81693088 None:intergenic
AAACATGATCATGATCATGA+TGG 0.561670 4_4:+81699407 None:intergenic
TTAAGGAAGTATGCTGTTGG+AGG 0.563370 4_4:-81697433 Msa0708230:CDS
CTTACAAACACTACGTGACA+TGG 0.566137 4_4:+81693162 None:intergenic
GCAGTTGGAGTAGTAGGAGG+AGG 0.566786 4_4:+81694924 None:intergenic
AGTGCAGCTAGGAGAAGACT+TGG 0.568845 4_4:+81693111 None:intergenic
AGAAGGGTATATAGCCCAGT+TGG 0.569404 4_4:-81693367 Msa0708230:CDS
GACATTTGTAGAGGTAGAAG+CGG 0.571411 4_4:-81697290 Msa0708230:CDS
ATTGTAGCCTGTCACAACAT+TGG 0.572141 4_4:-81698868 Msa0708230:intron
TGGACACAGAGTCCACCATC+GGG 0.572536 4_4:-81694565 Msa0708230:intron
ACAGATTGTGGAGTGCAGCT+AGG 0.573509 4_4:+81693100 None:intergenic
CATTAAGTTGCAGTATGGAA+AGG 0.575253 4_4:-81695134 Msa0708230:intron
CCACCATCGGGCATGACGAA+TGG 0.575275 4_4:-81694553 Msa0708230:CDS
TTGTCTGACGTCTGGTTCGG+AGG 0.575753 4_4:+81694078 None:intergenic
CATACTGCAACTTAATGTAA+GGG 0.576632 4_4:+81695140 None:intergenic
ATACTGCAAATGTATTTGAA+GGG 0.577180 4_4:-81693014 Msa0708230:three_prime_UTR
GTATCATTCCAGACAGCAGT+TGG 0.577863 4_4:+81694909 None:intergenic
CCTCTCCAAGGGGTGAAAAG+TGG 0.578595 4_4:-81694048 Msa0708230:CDS
TTCATTTGTATCTACACCTG+AGG 0.578623 4_4:-81697857 Msa0708230:CDS
ACTCTAGAGGATACACAAGA+AGG 0.578975 4_4:-81693384 Msa0708230:CDS
CCAGAACTCACTCCTTCAAG+TGG 0.579493 4_4:+81694744 None:intergenic
TTATTGCTGCTGATCTTAGA+GGG 0.581530 4_4:-81694495 Msa0708230:CDS
CTCTAGAGGATACACAAGAA+GGG 0.583918 4_4:-81693383 Msa0708230:CDS
ACTTGTTCTTATTGAAGCGA+GGG 0.585320 4_4:-81694521 Msa0708230:CDS
ACAAAACTGTCAACCCTCGT+TGG 0.587051 4_4:-81694218 Msa0708230:CDS
CTTGAAGGCCCAAACTGGGA+GGG 0.587914 4_4:+81698470 None:intergenic
GGAATTGCCTTTGGAAGCGG+GGG 0.588283 4_4:-81697826 Msa0708230:CDS
CAACCATTCGTCATGCCCGA+TGG 0.589961 4_4:+81694550 None:intergenic
CGAACCAGACGTCAGACAAG+TGG 0.590076 4_4:-81694074 Msa0708230:CDS
ATTTGTAGAGGTAGAAGCGG+AGG 0.594686 4_4:-81697287 Msa0708230:CDS
TAAAATAGAAGCAATTTGGG+TGG 0.594996 4_4:-81694709 Msa0708230:CDS
AGGAATTGCCTTTGGAAGCG+GGG 0.597693 4_4:-81697827 Msa0708230:CDS
AATGAATATTCATAATATGG+TGG 0.598159 4_4:+81699461 None:intergenic
ACAAGTGGATACCTCTCCAA+GGG 0.598171 4_4:-81694059 Msa0708230:CDS
CCATTCGTCATGCCCGATGG+TGG 0.598760 4_4:+81694553 None:intergenic
AAAGAGTGGCAATTCTCTGA+TGG 0.601133 4_4:-81695309 Msa0708230:intron
ATGGACACAGAGTCCACCAT+CGG 0.603021 4_4:-81694566 Msa0708230:intron
GGAGAACCAAGAGGGATCAA+AGG 0.603156 4_4:-81694688 Msa0708230:intron
AGAGAAGAAGGATAATTGGA+AGG 0.604569 4_4:+81699161 None:intergenic
TAATTTGAACATACCAGCCA+AGG 0.606696 4_4:+81697769 None:intergenic
AAACTGAAACAGCGGCGCCG+AGG 0.611310 4_4:+81697469 None:intergenic
ACAGCAGTTGGAGTAGTAGG+AGG 0.613903 4_4:+81694921 None:intergenic
AATTCTTCTCCATCCCTCAA+CGG 0.617791 4_4:-81693288 Msa0708230:CDS
TTTCTAGGAGTTGCTTCAAG+GGG 0.619070 4_4:-81697375 Msa0708230:CDS
ATCAGCAAAATAAATGAACT+GGG 0.620106 4_4:-81693324 Msa0708230:CDS
ACATGCAAAGTTATGTGGAG+AGG 0.622013 4_4:-81696087 Msa0708230:CDS
AGTGCACATGTAAATTTGGA+AGG 0.622106 4_4:-81694801 Msa0708230:CDS
AATGCTTGTCCCATTTGAGG+GGG 0.623716 4_4:-81696057 Msa0708230:CDS
AGTCATACTTCACACTGTCA+GGG 0.623937 4_4:+81697149 None:intergenic
TCGTATCATAGTCAATACTT+CGG 0.625393 4_4:-81698972 Msa0708230:intron
TAAAGACCATGGTGGAACCT+CGG 0.628622 4_4:-81697486 Msa0708230:CDS
GACAAGTGGATACCTCTCCA+AGG 0.630168 4_4:-81694060 Msa0708230:CDS
CATTTGCTCAGTCTCCAACT+GGG 0.632844 4_4:+81693353 None:intergenic
GGACTTGCAGACATTTGTAG+AGG 0.638975 4_4:-81697299 Msa0708230:CDS
ACTGGTACAAGGGTCAATCA+GGG 0.643146 4_4:-81694778 Msa0708230:CDS
CCTTGAAGGCCCAAACTGGG+AGG 0.643279 4_4:+81698469 None:intergenic
TGCAGTATGGGAATTACCAG+CGG 0.644594 4_4:-81699030 Msa0708230:intron
GTCATACTTCACACTGTCAG+GGG 0.645119 4_4:+81697150 None:intergenic
CATTCACCTATACTTGATGT+GGG 0.646006 4_4:+81694123 None:intergenic
GAGCGAGTTAGAAACTCTAG+AGG 0.650693 4_4:-81693397 Msa0708230:CDS
ACCAGCCAAGGAGAAACACC+AGG 0.651021 4_4:+81697781 None:intergenic
TGACACTTTGGTAAAGACCA+TGG 0.652545 4_4:-81697497 Msa0708230:CDS
CTAAGGTCTGGTCCCAACGA+GGG 0.653594 4_4:+81694205 None:intergenic
TTACCAGCGGAAAATGCTTG+AGG 0.654150 4_4:-81699017 Msa0708230:CDS
TCATACTTCACACTGTCAGG+GGG 0.655219 4_4:+81697151 None:intergenic
ATTTGGGTGGAGAACCAAGA+GGG 0.655601 4_4:-81694696 Msa0708230:CDS
AGAAGAAAACGTGAGCGACA+AGG 0.657017 4_4:-81697320 Msa0708230:CDS
GGATGATTCAACAATTGTGT+GGG 0.659331 4_4:-81696141 Msa0708230:CDS
AAGGTTATCAGCCATAGTAG+AGG 0.659514 4_4:-81698775 Msa0708230:intron
CCAGCGGAAAATGCTTGAGG+AGG 0.662140 4_4:-81699014 Msa0708230:CDS
TCCTTTACATGCAATGTCAG+GGG 0.664800 4_4:+81694162 None:intergenic
CAGAACTCACTCCTTCAAGT+GGG 0.666922 4_4:+81694745 None:intergenic
AAATAAAACCTGATCACCAG+AGG 0.670333 4_4:+81698432 None:intergenic
AGGATGATTCAACAATTGTG+TGG 0.671943 4_4:-81696142 Msa0708230:CDS
AAACTTAAAGAAAAGAACAA+AGG 0.675630 4_4:-81694440 Msa0708230:intron
CGATGAGAAGATGAGGCATG+TGG 0.684411 4_4:-81696165 Msa0708230:intron
TGAGAAGATGAGGCATGTGG+AGG 0.692283 4_4:-81696162 Msa0708230:intron
AAAGGTACCCAATTTCTCTG+TGG 0.695299 4_4:+81699508 None:intergenic
TCTAAGGTCTGGTCCCAACG+AGG 0.697996 4_4:+81694204 None:intergenic
CACTTTGGTAAAGACCATGG+TGG 0.701388 4_4:-81697494 Msa0708230:CDS
TTAATCCTAAGCTTTCAACA+AGG 0.704753 4_4:-81698794 Msa0708230:CDS
CATACTTCACACTGTCAGGG+GGG 0.713851 4_4:+81697152 None:intergenic
GCGGCGCCGAGGTTCCACCA+TGG 0.714667 4_4:+81697480 None:intergenic
CAACATTGGAACAATGTGAG+TGG 0.720711 4_4:-81698854 Msa0708230:CDS
CAAGTGGATACCTCTCCAAG+GGG 0.733533 4_4:-81694058 Msa0708230:CDS
AGAAACACCAGGCAACTCAG+TGG 0.743799 4_4:+81697792 None:intergenic
AATTTGGGTGGAGAACCAAG+AGG 0.782070 4_4:-81694697 Msa0708230:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTAATATAGAATTCTAT+TGG - chr4_4:81694215-81694234 Msa0708230:CDS 10.0%
!! GATTATATAATCATTTAATA+TGG - chr4_4:81696801-81696820 Msa0708230:intron 10.0%
!! AGAATTAAAAAAAGTTAAAA+TGG + chr4_4:81697148-81697167 None:intergenic 10.0%
!! TATAAATATATTAAAAACCT+TGG + chr4_4:81697465-81697484 None:intergenic 10.0%
!! AGAAATGAATATTCATAATA+TGG + chr4_4:81693051-81693070 None:intergenic 15.0%
!!! ATAGATACTTTGTTTATTTA+AGG - chr4_4:81694133-81694152 Msa0708230:CDS 15.0%
!! ATATTAAAATCTCATATAAG+TGG + chr4_4:81694205-81694224 None:intergenic 15.0%
!! GTTTATGTAAAAAACAATTA+AGG + chr4_4:81695645-81695664 None:intergenic 15.0%
!! ACTAAAAAACTTATTTCAAT+CGG + chr4_4:81697109-81697128 None:intergenic 15.0%
!!! TTAATTCTGTTTTTAGTTAA+AGG - chr4_4:81697160-81697179 Msa0708230:CDS 15.0%
!!! TATTTCTACAAATTGTTAAA+TGG + chr4_4:81698720-81698739 None:intergenic 15.0%
!! ACATTATATATATCAGATAA+AGG - chr4_4:81699022-81699041 Msa0708230:CDS 15.0%
!! AATGAATATTCATAATATGG+TGG + chr4_4:81693048-81693067 None:intergenic 20.0%
!! TTTGATCATTACCAATAATT+TGG - chr4_4:81693195-81693214 Msa0708230:three_prime_UTR 20.0%
!! AAGCTTAGGATTAAAATAAT+TGG + chr4_4:81693706-81693725 None:intergenic 20.0%
!!! TGTTTATTTAAGGTCTATTA+TGG - chr4_4:81694143-81694162 Msa0708230:CDS 20.0%
!! GAATATATATAAGCACTTAA+GGG + chr4_4:81694183-81694202 None:intergenic 20.0%
!! ATTAACAGTCTTCATATTAA+GGG - chr4_4:81694337-81694356 Msa0708230:intron 20.0%
!! AGAACTATAAATATGATTAC+TGG - chr4_4:81694480-81694499 Msa0708230:CDS 20.0%
!! GAATGATTAGATTATAGAAA+AGG + chr4_4:81694573-81694592 None:intergenic 20.0%
!!! CAATATGTATATATGGTTTT+TGG - chr4_4:81695463-81695482 Msa0708230:intron 20.0%
!! TGTACATATTTATAAAGGAT+GGG + chr4_4:81695797-81695816 None:intergenic 20.0%
!! TCAAAAGTTAAATTCATAGA+TGG + chr4_4:81695874-81695893 None:intergenic 20.0%
!!! ATTTAACTTTTGAAATGCAA+TGG - chr4_4:81695881-81695900 Msa0708230:intron 20.0%
!! AAATTAATATGGATGCAATA+GGG - chr4_4:81696008-81696027 Msa0708230:intron 20.0%
!!! GTTTTAGGTGATAATTTAAA+AGG - chr4_4:81696138-81696157 Msa0708230:CDS 20.0%
!!! ATCATGTTCCTTTTATAAAT+GGG + chr4_4:81696671-81696690 None:intergenic 20.0%
!!! AATCATGTTCCTTTTATAAA+TGG + chr4_4:81696672-81696691 None:intergenic 20.0%
!! TATAATCATTTAATATGGAG+AGG - chr4_4:81696806-81696825 Msa0708230:intron 20.0%
!! ACTTAAAATAGAAGCAATTT+GGG - chr4_4:81697794-81697813 Msa0708230:CDS 20.0%
!! AAACTTAAAGAAAAGAACAA+AGG - chr4_4:81698066-81698085 Msa0708230:intron 20.0%
!! AATAAAACTTGTAAATCGTA+AGG + chr4_4:81698134-81698153 None:intergenic 20.0%
!! TTATTTGTTTCATACTTGTA+AGG - chr4_4:81698230-81698249 Msa0708230:CDS 20.0%
!! CTAATAACAATGTTAAATAG+TGG + chr4_4:81699274-81699293 None:intergenic 20.0%
! GAAAAGAAAAGAAAAGAGAA+AGG + chr4_4:81693019-81693038 None:intergenic 25.0%
!!! ATCATGATGGATCATAAAAA+AGG + chr4_4:81693089-81693108 None:intergenic 25.0%
!! TTATTCTCGTTTTCATTGTT+TGG - chr4_4:81693287-81693306 Msa0708230:CDS 25.0%
!!! TTCATCTTTATTTTGCAGTA+TGG - chr4_4:81693463-81693482 Msa0708230:CDS 25.0%
!!! TCATCTTTATTTTGCAGTAT+GGG - chr4_4:81693464-81693483 Msa0708230:CDS 25.0%
! TAAAATGCCAAAAAGACAAT+TGG + chr4_4:81693573-81693592 None:intergenic 25.0%
! ATCTATTGTTGTCACAAATA+TGG - chr4_4:81693679-81693698 Msa0708230:intron 25.0%
! TCAATACTCACTATAAATCT+TGG + chr4_4:81693875-81693894 None:intergenic 25.0%
!!! TGAGTATTGATCATTTTCTT+TGG - chr4_4:81693885-81693904 Msa0708230:intron 25.0%
!!! ATTGGATGTTCAAACTTTTT+TGG + chr4_4:81693934-81693953 None:intergenic 25.0%
! TTCAGCAGGATTTATTAAAT+TGG + chr4_4:81693952-81693971 None:intergenic 25.0%
! GGAATATATATAAGCACTTA+AGG + chr4_4:81694184-81694203 None:intergenic 25.0%
! GATTAACAGTCTTCATATTA+AGG - chr4_4:81694336-81694355 Msa0708230:intron 25.0%
!!! GATACATTCTTTATTTTCTG+AGG - chr4_4:81694537-81694556 Msa0708230:CDS 25.0%
! AACTTGATGTCTATAATTTC+TGG - chr4_4:81694777-81694796 Msa0708230:CDS 25.0%
!! GACATGATTTTTATAGACAA+CGG + chr4_4:81694829-81694848 None:intergenic 25.0%
! AGTAAAAAGTTTAACCTGTA+TGG + chr4_4:81694990-81695009 None:intergenic 25.0%
!! TAAACTTTTTACTGACACTT+TGG - chr4_4:81694997-81695016 Msa0708230:intron 25.0%
! ATATATGTTTCAGTGATTTC+TGG - chr4_4:81695100-81695119 Msa0708230:intron 25.0%
!!! ATGGTTTTACATGATAATAC+AGG - chr4_4:81695304-81695323 Msa0708230:intron 25.0%
! CTAGCAATTGGATTATTAAT+CGG - chr4_4:81695436-81695455 Msa0708230:intron 25.0%
!! AAATGCTTAATTTGAAGATC+CGG + chr4_4:81695605-81695624 None:intergenic 25.0%
! TTTAGCAAAGTCAAAGATTA+AGG + chr4_4:81695696-81695715 None:intergenic 25.0%
! GTACATATTTATAAAGGATG+GGG + chr4_4:81695796-81695815 None:intergenic 25.0%
! GTGTACATATTTATAAAGGA+TGG + chr4_4:81695798-81695817 None:intergenic 25.0%
! TAAAACGTCTAATTTGAACA+CGG - chr4_4:81695904-81695923 Msa0708230:intron 25.0%
!! TAATTTGTCGTGAAGTTTAT+AGG + chr4_4:81695994-81696013 None:intergenic 25.0%
! AACTTCACGACAAATTAATA+TGG - chr4_4:81695997-81696016 Msa0708230:intron 25.0%
! CAAATTAATATGGATGCAAT+AGG - chr4_4:81696007-81696026 Msa0708230:intron 25.0%
! AATTAATATGGATGCAATAG+GGG - chr4_4:81696009-81696028 Msa0708230:intron 25.0%
! TTCAAATCAAGAAAGAAGAA+CGG + chr4_4:81696595-81696614 None:intergenic 25.0%
! GACAGATATTCAAATTAAGT+TGG - chr4_4:81696731-81696750 Msa0708230:intron 25.0%
!!! TTGTTTTTTTTTTTCGAACG+TGG - chr4_4:81697005-81697024 Msa0708230:intron 25.0%
!!! TGTTTTTTTTTTTCGAACGT+GGG - chr4_4:81697006-81697025 Msa0708230:intron 25.0%
! ATCAAATCTTCTTTCAAAAC+TGG - chr4_4:81697274-81697293 Msa0708230:CDS 25.0%
!! ATATCTGTTTTACTCGTTTT+AGG - chr4_4:81697411-81697430 Msa0708230:CDS 25.0%
! AGATTATCAATAACAGAATC+AGG + chr4_4:81697532-81697551 None:intergenic 25.0%
!! TGCTTTAGTGAAGAAATTTT+TGG - chr4_4:81697666-81697685 Msa0708230:intron 25.0%
!!! ATTTTTGGAGATGAAAACAT+TGG - chr4_4:81697681-81697700 Msa0708230:intron 25.0%
! GACTTAAAATAGAAGCAATT+TGG - chr4_4:81697793-81697812 Msa0708230:CDS 25.0%
! CATAAGAAGATATAATGTGA+TGG + chr4_4:81698158-81698177 None:intergenic 25.0%
! CATCACATTATATCTTCTTA+TGG - chr4_4:81698156-81698175 Msa0708230:intron 25.0%
! ATTGTATTCGTTGTCTTAAA+AGG - chr4_4:81698664-81698683 Msa0708230:intron 25.0%
! ACAATTTGTAGAAATATCTC+TGG - chr4_4:81698724-81698743 Msa0708230:intron 25.0%
! TATGCATAGAAAAATGAACA+GGG + chr4_4:81698766-81698785 None:intergenic 25.0%
! ACGTAAATTTATTCTACCAA+TGG + chr4_4:81698866-81698885 None:intergenic 25.0%
!!! AAAATAATCGAGTTGATGAA+TGG + chr4_4:81698909-81698928 None:intergenic 25.0%
! TATCAGCAAAATAAATGAAC+TGG - chr4_4:81699181-81699200 Msa0708230:CDS 25.0%
! ATCAGCAAAATAAATGAACT+GGG - chr4_4:81699182-81699201 Msa0708230:CDS 25.0%
! CTATATCATTATACAGATTG+TGG + chr4_4:81699421-81699440 None:intergenic 25.0%
! GTCATTATTACAATCATCAA+TGG + chr4_4:81699469-81699488 None:intergenic 25.0%
! TATACTGCAAATGTATTTGA+AGG - chr4_4:81699491-81699510 Msa0708230:five_prime_UTR 25.0%
! ATACTGCAAATGTATTTGAA+GGG - chr4_4:81699492-81699511 Msa0708230:five_prime_UTR 25.0%
! AGTGTGAATGTATTATCAAT+TGG - chr4_4:81699528-81699547 Msa0708230:five_prime_UTR 25.0%
GTGGTTCATAAATTCTTCTT+GGG + chr4_4:81692982-81693001 None:intergenic 30.0%
TGTGGTTCATAAATTCTTCT+TGG + chr4_4:81692983-81693002 None:intergenic 30.0%
TTTATGAACCACAGAGAAAT+TGG - chr4_4:81692990-81693009 Msa0708230:three_prime_UTR 30.0%
TTATGAACCACAGAGAAATT+GGG - chr4_4:81692991-81693010 Msa0708230:three_prime_UTR 30.0%
AAACATGATCATGATCATGA+TGG + chr4_4:81693102-81693121 None:intergenic 30.0%
TGAAGCTTCTTCCAAATTAT+TGG + chr4_4:81693209-81693228 None:intergenic 30.0%
TTTGCTTCACTTTCACTAAT+TGG + chr4_4:81693246-81693265 None:intergenic 30.0%
TGAAAGTGAAGCAAAATTCA+CGG - chr4_4:81693251-81693270 Msa0708230:three_prime_UTR 30.0%
! TTGTTTGGCTTATTCACAAA+TGG - chr4_4:81693302-81693321 Msa0708230:CDS 30.0%
TCGTATCATAGTCAATACTT+CGG - chr4_4:81693534-81693553 Msa0708230:intron 30.0%
! TTTCACTCCAATTGTCTTTT+TGG - chr4_4:81693563-81693582 Msa0708230:intron 30.0%
TTAATCCTAAGCTTTCAACA+AGG - chr4_4:81693712-81693731 Msa0708230:intron 30.0%
! TTCCGTCTTTTCTTATGTAT+TGG - chr4_4:81693760-81693779 Msa0708230:intron 30.0%
CTCCAATACATAAGAAAAGA+CGG + chr4_4:81693765-81693784 None:intergenic 30.0%
!!! TATTGGAGTTTTGAGTTAGT+CGG - chr4_4:81693777-81693796 Msa0708230:intron 30.0%
! TTTCTTTTGTGTCTCAGAAA+CGG - chr4_4:81693834-81693853 Msa0708230:intron 30.0%
!! GTATTGATCATTTTCTTTGG+TGG - chr4_4:81693888-81693907 Msa0708230:intron 30.0%
ACTAAAGAAATAATTTCCGC+AGG - chr4_4:81693976-81693995 Msa0708230:CDS 30.0%
AAGACTGTTAATCACAATTC+TGG + chr4_4:81694329-81694348 None:intergenic 30.0%
GCAGTTTGAATTAAGTGATT+AGG - chr4_4:81694801-81694820 Msa0708230:CDS 30.0%
GAAAGATACTTGAAACATCA+AGG + chr4_4:81694898-81694917 None:intergenic 30.0%
AAAAGTTTAACCTGTATGGA+AGG + chr4_4:81694986-81695005 None:intergenic 30.0%
! TTTCTGGAAACAAACTTTCT+AGG - chr4_4:81695116-81695135 Msa0708230:intron 30.0%
ATGGGATACGACATTTAATA+TGG - chr4_4:81695285-81695304 Msa0708230:intron 30.0%
CACACAAAAACAAACATCTA+TGG + chr4_4:81695416-81695435 None:intergenic 30.0%
!!! GTGTTTTTAAAACTGGTTAC+TGG - chr4_4:81695575-81695594 Msa0708230:intron 30.0%
AAAGTCAAAGATTAAGGAAG+GGG + chr4_4:81695690-81695709 None:intergenic 30.0%
CAAAGTCAAAGATTAAGGAA+GGG + chr4_4:81695691-81695710 None:intergenic 30.0%
GGTGGTGTACATATTTATAA+AGG + chr4_4:81695802-81695821 None:intergenic 30.0%
ATTTGAATCATGTGACACTT+TGG + chr4_4:81695851-81695870 None:intergenic 30.0%
!!! GGATAACATTTTTGGAATAG+AGG - chr4_4:81696077-81696096 Msa0708230:CDS 30.0%
!!! CATTTTTGGAATAGAGGTAA+TGG - chr4_4:81696083-81696102 Msa0708230:CDS 30.0%
AAAAACTGAACTTGTATAGC+CGG - chr4_4:81696167-81696186 Msa0708230:intron 30.0%
ACGACGGTATTAAAAATAAG+AGG + chr4_4:81696273-81696292 None:intergenic 30.0%
!!! TCTTATTTTTAATACCGTCG+TGG - chr4_4:81696272-81696291 Msa0708230:intron 30.0%
ATTAGATGAAAATCCAACAC+TGG + chr4_4:81696558-81696577 None:intergenic 30.0%
TCAAATCAAGAAAGAAGAAC+GGG + chr4_4:81696594-81696613 None:intergenic 30.0%
GGTAGATGAAAAATCATAAG+TGG - chr4_4:81696752-81696771 Msa0708230:intron 30.0%
!! TTTCACGTTGATAATCTTTC+TGG - chr4_4:81696834-81696853 Msa0708230:intron 30.0%
!! ACTACTTTCATTTTCAAGAG+CGG + chr4_4:81697076-81697095 None:intergenic 30.0%
AAACTTATTTCAATCGGAAG+AGG + chr4_4:81697103-81697122 None:intergenic 30.0%
AATCTTCTTTCAAAACTGGA+AGG - chr4_4:81697278-81697297 Msa0708230:CDS 30.0%
GAAACTTAAGATAACTGTTG+TGG - chr4_4:81697300-81697319 Msa0708230:CDS 30.0%
CATACTGCAACTTAATGTAA+GGG + chr4_4:81697369-81697388 None:intergenic 30.0%
! CTGTTATTGATAATCTGTTC+AGG - chr4_4:81697536-81697555 Msa0708230:intron 30.0%
! CACTAAAGCATTTCACAATT+AGG + chr4_4:81697656-81697675 None:intergenic 30.0%
TAAAATAGAAGCAATTTGGG+TGG - chr4_4:81697797-81697816 Msa0708230:CDS 30.0%
! CAAAGGTATGCTTCTTTAAT+AGG - chr4_4:81697835-81697854 Msa0708230:CDS 30.0%
!! CTAAGCAGAATTTTTAACTC+TGG - chr4_4:81697884-81697903 Msa0708230:CDS 30.0%
TTGTAAATCGTAAGGATGTT+TGG + chr4_4:81698126-81698145 None:intergenic 30.0%
!! ATGGTGTTATACACTTATAC+TGG - chr4_4:81698175-81698194 Msa0708230:CDS 30.0%
TTGTAAGGCTTAATTTACTG+TGG - chr4_4:81698245-81698264 Msa0708230:CDS 30.0%
TAATTTACTGTGGCATTATC+TGG - chr4_4:81698255-81698274 Msa0708230:CDS 30.0%
TGGTGTAATTTAGTCAAAGA+AGG + chr4_4:81698551-81698570 None:intergenic 30.0%
! ATTGTGTATCAGTGTGTTTT+GGG + chr4_4:81698606-81698625 None:intergenic 30.0%
! TATTGTGTATCAGTGTGTTT+TGG + chr4_4:81698607-81698626 None:intergenic 30.0%
CTGATACACAATATAACCTT+TGG - chr4_4:81698614-81698633 Msa0708230:intron 30.0%
GTATGCATAGAAAAATGAAC+AGG + chr4_4:81698767-81698786 None:intergenic 30.0%
! TTGGTTTATATGCCATTTCT+TGG - chr4_4:81698818-81698837 Msa0708230:CDS 30.0%
! TGGTTTATATGCCATTTCTT+GGG - chr4_4:81698819-81698838 Msa0708230:CDS 30.0%
TTCTCTTATTGCTAAACCAT+TGG - chr4_4:81698847-81698866 Msa0708230:CDS 30.0%
!! ATGGATTGTTTCTATCAGAA+AGG + chr4_4:81698890-81698909 None:intergenic 30.0%
TCAACAGTATGTGAGAAAAA+TGG + chr4_4:81698996-81699015 None:intergenic 30.0%
AGGAGATGACAAAAAAGATT+CGG - chr4_4:81699042-81699061 Msa0708230:intron 30.0%
! AAAGATTCGGTCTTTAATAG+TGG - chr4_4:81699055-81699074 Msa0708230:intron 30.0%
!! TTTAATAGTGGATGGAAATC+TGG - chr4_4:81699067-81699086 Msa0708230:intron 30.0%
GAGAAGAATTTATGATCTCT+TGG + chr4_4:81699208-81699227 None:intergenic 30.0%
TATTTGAAGGGAATTGAGTA+AGG - chr4_4:81699504-81699523 Msa0708230:five_prime_UTR 30.0%
AAGGATAATTGGAAGGCAAT+TGG + chr4_4:81693341-81693360 None:intergenic 35.0%
AGAGAAGAAGGATAATTGGA+AGG + chr4_4:81693348-81693367 None:intergenic 35.0%
GCAAAGAGAAGAAGGATAAT+TGG + chr4_4:81693352-81693371 None:intergenic 35.0%
GATAACCTTGTTGAAAGCTT+AGG + chr4_4:81693720-81693739 None:intergenic 35.0%
! TTTCTTTAGTTCAGTTCAGC+AGG + chr4_4:81693966-81693985 None:intergenic 35.0%
AGAAATAATTTCCGCAGGAA+AGG - chr4_4:81693981-81694000 Msa0708230:CDS 35.0%
GAAATAATTTCCGCAGGAAA+GGG - chr4_4:81693982-81694001 Msa0708230:CDS 35.0%
AAATAAAACCTGATCACCAG+AGG + chr4_4:81694077-81694096 None:intergenic 35.0%
!! TCCTGAAAATGGGTTTTGAT+TGG - chr4_4:81694251-81694270 Msa0708230:intron 35.0%
!!! CCTGAAAATGGGTTTTGATT+GGG - chr4_4:81694252-81694271 Msa0708230:intron 35.0%
! GAATGAGATGAGCATTTTGA+TGG - chr4_4:81694279-81694298 Msa0708230:intron 35.0%
! CTAAGGAGCATAAATGCAAA+GGG + chr4_4:81694382-81694401 None:intergenic 35.0%
! TCTAAGGAGCATAAATGCAA+AGG + chr4_4:81694383-81694402 None:intergenic 35.0%
! ATAGCTCTATTGCATGTCTA+AGG + chr4_4:81694399-81694418 None:intergenic 35.0%
! AGTGCTTTTCCATCTAGTAT+TGG + chr4_4:81694623-81694642 None:intergenic 35.0%
TTCATTTGTATCTACACCTG+AGG - chr4_4:81694649-81694668 Msa0708230:intron 35.0%
GTTAGAATAGGAATTGCCTT+TGG - chr4_4:81694671-81694690 Msa0708230:intron 35.0%
TAATTTGAACATACCAGCCA+AGG + chr4_4:81694740-81694759 None:intergenic 35.0%
TTCCAAGAATGAATGAGCAT+GGG + chr4_4:81694871-81694890 None:intergenic 35.0%
ATAGTAGTTACCTTCCATAC+AGG - chr4_4:81694973-81694992 Msa0708230:intron 35.0%
TACTTCCTTAAATCAACTGC+AGG + chr4_4:81695064-81695083 None:intergenic 35.0%
! GATTTAAGGAAGTATGCTGT+TGG - chr4_4:81695070-81695089 Msa0708230:intron 35.0%
CAACAAAATGGCACAAGTAA+TGG - chr4_4:81695157-81695176 Msa0708230:CDS 35.0%
!!! TTTTGGTTCAACTCCAAGAT+GGG - chr4_4:81695267-81695286 Msa0708230:intron 35.0%
TTAAATGTCGTATCCCATCT+TGG + chr4_4:81695283-81695302 None:intergenic 35.0%
CCTTAATTTCACAAGATGCT+AGG + chr4_4:81695384-81695403 None:intergenic 35.0%
CCTAGCATCTTGTGAAATTA+AGG - chr4_4:81695381-81695400 Msa0708230:intron 35.0%
!! TGTTTTTGTGTGCTAGCAAT+TGG - chr4_4:81695424-81695443 Msa0708230:intron 35.0%
CGGCTGTCAATATGTATATA+TGG - chr4_4:81695456-81695475 Msa0708230:intron 35.0%
!! AAAACTGGTTACTGGTTTAC+CGG - chr4_4:81695583-81695602 Msa0708230:intron 35.0%
!! GTGAGAGTTATTTTGCAGAT+AGG + chr4_4:81695667-81695686 None:intergenic 35.0%
AAGTCAAAGATTAAGGAAGG+GGG + chr4_4:81695689-81695708 None:intergenic 35.0%
GCAAAGTCAAAGATTAAGGA+AGG + chr4_4:81695692-81695711 None:intergenic 35.0%
TTGGCTTAGATGATTGTAGT+GGG + chr4_4:81695765-81695784 None:intergenic 35.0%
ATGTGACACTTTGGATCTAT+AGG + chr4_4:81695842-81695861 None:intergenic 35.0%
! GGGAAGTTTTTGTGAATTCA+TGG - chr4_4:81696029-81696048 Msa0708230:intron 35.0%
AATGTTGTTGAATCCTTGTC+TGG - chr4_4:81696112-81696131 Msa0708230:CDS 35.0%
!!! ATCCTTGTCTGGTTTGTTTT+AGG - chr4_4:81696123-81696142 Msa0708230:CDS 35.0%
TATATGAAGCTTTACCACGA+CGG + chr4_4:81696289-81696308 None:intergenic 35.0%
TCTCATCGACATACAGAAAT+AGG + chr4_4:81696329-81696348 None:intergenic 35.0%
AGGATGATTCAACAATTGTG+TGG - chr4_4:81696364-81696383 Msa0708230:intron 35.0%
GGATGATTCAACAATTGTGT+GGG - chr4_4:81696365-81696384 Msa0708230:intron 35.0%
!! TTTGCTATTACACCAGAATC+AGG + chr4_4:81696399-81696418 None:intergenic 35.0%
GCAAAACATGCAAAGTTATG+TGG - chr4_4:81696414-81696433 Msa0708230:intron 35.0%
! ATATTGTACCTCTGCTGATT+TGG + chr4_4:81696475-81696494 None:intergenic 35.0%
GTCAAGCTTTCTTTGCTTTA+TGG - chr4_4:81696505-81696524 Msa0708230:intron 35.0%
AAGCTTTCTTTGCTTTATGG+TGG - chr4_4:81696508-81696527 Msa0708230:intron 35.0%
TTATCTTACATTGCCAGTGT+TGG - chr4_4:81696542-81696561 Msa0708230:intron 35.0%
CTTGCATGCCCATTTATAAA+AGG - chr4_4:81696660-81696679 Msa0708230:intron 35.0%
TTTGCAAGTTGTATCTGCAA+TGG - chr4_4:81696864-81696883 Msa0708230:intron 35.0%
TGAGAATTGTAGTGAAAGAG+TGG - chr4_4:81697183-81697202 Msa0708230:CDS 35.0%
AGTCCTCAGAAATCACTTAA+GGG - chr4_4:81697248-81697267 Msa0708230:CDS 35.0%
CTTGATGCAAAAGACAGATT+TGG - chr4_4:81697334-81697353 Msa0708230:CDS 35.0%
CCATACTGCAACTTAATGTA+AGG + chr4_4:81697370-81697389 None:intergenic 35.0%
! CCTTACATTAAGTTGCAGTA+TGG - chr4_4:81697367-81697386 Msa0708230:CDS 35.0%
! CATTAAGTTGCAGTATGGAA+AGG - chr4_4:81697372-81697391 Msa0708230:CDS 35.0%
! TGTCATGTATTGATGAACCA+AGG - chr4_4:81697445-81697464 Msa0708230:CDS 35.0%
!! TGTCTGGAATGATACTTTTG+AGG - chr4_4:81697605-81697624 Msa0708230:intron 35.0%
! TTTGAGGTAGATGAGAATAG+TGG - chr4_4:81697621-81697640 Msa0708230:intron 35.0%
! TGGTAGTGCACATGTAAATT+TGG - chr4_4:81697701-81697720 Msa0708230:intron 35.0%
AGTGCACATGTAAATTTGGA+AGG - chr4_4:81697705-81697724 Msa0708230:intron 35.0%
ACATGTAAATTTGGAAGGAC+TGG - chr4_4:81697710-81697729 Msa0708230:intron 35.0%
! AACTTGTTCTTATTGAAGCG+AGG - chr4_4:81697984-81698003 Msa0708230:intron 35.0%
ACTTGTTCTTATTGAAGCGA+GGG - chr4_4:81697985-81698004 Msa0708230:intron 35.0%
TTATTGCTGCTGATCTTAGA+GGG - chr4_4:81698011-81698030 Msa0708230:intron 35.0%
! ATGTGGGTAGTAAAGCATTA+TGG + chr4_4:81698370-81698389 None:intergenic 35.0%
TTACTACCCACATCAAGTAT+AGG - chr4_4:81698377-81698396 Msa0708230:intron 35.0%
CATTCACCTATACTTGATGT+GGG + chr4_4:81698386-81698405 None:intergenic 35.0%
ACATTCACCTATACTTGATG+TGG + chr4_4:81698387-81698406 None:intergenic 35.0%
!! CTTTTCTTGTGATTTGGATG+TGG + chr4_4:81698490-81698509 None:intergenic 35.0%
! CTGGAACTTTTCTTGTGATT+TGG + chr4_4:81698496-81698515 None:intergenic 35.0%
!! GATTGTCTTGTTTGAATCTC+TGG + chr4_4:81698515-81698534 None:intergenic 35.0%
AGATGCAAGATAATCTTACC+TGG + chr4_4:81698583-81698602 None:intergenic 35.0%
! TTCAAGAATTTTGAGCCAGT+TGG - chr4_4:81698799-81698818 Msa0708230:CDS 35.0%
GAAATGGCATATAAACCAAC+TGG + chr4_4:81698817-81698836 None:intergenic 35.0%
! GGTTTATATGCCATTTCTTG+GGG - chr4_4:81698820-81698839 Msa0708230:CDS 35.0%
! GTTTATATGCCATTTCTTGG+GGG - chr4_4:81698821-81698840 Msa0708230:CDS 35.0%
! ATTCGGTCTTTAATAGTGGA+TGG - chr4_4:81699059-81699078 Msa0708230:intron 35.0%
ATAGTGGTATGACACTAATC+AGG + chr4_4:81699258-81699277 None:intergenic 35.0%
TCACGTAGTGTTTGTAAGAA+TGG - chr4_4:81699349-81699368 Msa0708230:exon 35.0%
!! AAAGGTACCCAATTTCTCTG+TGG + chr4_4:81693001-81693020 None:intergenic 40.0%
TTCTTACTGCTACTCATTGC+AGG + chr4_4:81693172-81693191 None:intergenic 40.0%
GTGTAGATGCAAAGAGAAGA+AGG + chr4_4:81693360-81693379 None:intergenic 40.0%
AGGAGGACTTGAACAAGAAA+TGG - chr4_4:81693509-81693528 Msa0708230:intron 40.0%
ATTGTAGCCTGTCACAACAT+TGG - chr4_4:81693638-81693657 Msa0708230:intron 40.0%
CATTGTTCCAATGTTGTGAC+AGG + chr4_4:81693648-81693667 None:intergenic 40.0%
CAACATTGGAACAATGTGAG+TGG - chr4_4:81693652-81693671 Msa0708230:intron 40.0%
AAGGTTATCAGCCATAGTAG+AGG - chr4_4:81693731-81693750 Msa0708230:intron 40.0%
CGGAAATTTCACCTCTACTA+TGG + chr4_4:81693745-81693764 None:intergenic 40.0%
!!! GAAGTGCTGGAATTTTCACT+TGG - chr4_4:81694007-81694026 Msa0708230:CDS 40.0%
TTGACCATCTAATCCCTTGA+AGG + chr4_4:81694054-81694073 None:intergenic 40.0%
! CCCAATCAAAACCCATTTTC+AGG + chr4_4:81694255-81694274 None:intergenic 40.0%
GTTGTGACACCAATACTAGA+TGG - chr4_4:81694611-81694630 Msa0708230:intron 40.0%
TCTACACCTGAGGTTAGAAT+AGG - chr4_4:81694659-81694678 Msa0708230:intron 40.0%
GCAATTCCTATTCTAACCTC+AGG + chr4_4:81694668-81694687 None:intergenic 40.0%
! ATAGGAATTGCCTTTGGAAG+CGG - chr4_4:81694677-81694696 Msa0708230:intron 40.0%
GTTCCAAGAATGAATGAGCA+TGG + chr4_4:81694872-81694891 None:intergenic 40.0%
ACATCATATGACACAGCACT+GGG + chr4_4:81694944-81694963 None:intergenic 40.0%
AACATCATATGACACAGCAC+TGG + chr4_4:81694945-81694964 None:intergenic 40.0%
TGACACTTTGGTAAAGACCA+TGG - chr4_4:81695009-81695028 Msa0708230:intron 40.0%
! GTTTGCCTGCAGTTGATTTA+AGG - chr4_4:81695056-81695075 Msa0708230:intron 40.0%
! TTAAGGAAGTATGCTGTTGG+AGG - chr4_4:81695073-81695092 Msa0708230:intron 40.0%
! ACTTTCTAGGAGTTGCTTCA+AGG - chr4_4:81695129-81695148 Msa0708230:intron 40.0%
! CTTTCTAGGAGTTGCTTCAA+GGG - chr4_4:81695130-81695149 Msa0708230:intron 40.0%
! TTTCTAGGAGTTGCTTCAAG+GGG - chr4_4:81695131-81695150 Msa0708230:intron 40.0%
GACATTTGTAGAGGTAGAAG+CGG - chr4_4:81695216-81695235 Msa0708230:intron 40.0%
!!! GTTTTGGTTCAACTCCAAGA+TGG - chr4_4:81695266-81695285 Msa0708230:intron 40.0%
AGTCATACTTCACACTGTCA+GGG + chr4_4:81695360-81695379 None:intergenic 40.0%
TAGTCATACTTCACACTGTC+AGG + chr4_4:81695361-81695380 None:intergenic 40.0%
!!! GTTTTAAAAACACGATGCCG+TGG + chr4_4:81695568-81695587 None:intergenic 40.0%
!!! CGGCATCGTGTTTTTAAAAC+TGG - chr4_4:81695568-81695587 Msa0708230:intron 40.0%
TGGCTTAGATGATTGTAGTG+GGG + chr4_4:81695764-81695783 None:intergenic 40.0%
! GTTGGCTTAGATGATTGTAG+TGG + chr4_4:81695766-81695785 None:intergenic 40.0%
TGTCGTGAAGTTTATAGGTG+AGG + chr4_4:81695989-81696008 None:intergenic 40.0%
! GGGCAAGAGGATAACATTTT+TGG - chr4_4:81696069-81696088 Msa0708230:CDS 40.0%
CACCTAAAACAAACCAGACA+AGG + chr4_4:81696128-81696147 None:intergenic 40.0%
TGTATGTCGATGAGAAGATG+AGG - chr4_4:81696334-81696353 Msa0708230:intron 40.0%
TCAACAATTGTGTGGGCAAT+AGG - chr4_4:81696372-81696391 Msa0708230:intron 40.0%
CAACAATTGTGTGGGCAATA+GGG - chr4_4:81696373-81696392 Msa0708230:intron 40.0%
ACATGCAAAGTTATGTGGAG+AGG - chr4_4:81696419-81696438 Msa0708230:intron 40.0%
TGAAATGCTTGTCCCATTTG+AGG - chr4_4:81696446-81696465 Msa0708230:intron 40.0%
GAAATGCTTGTCCCATTTGA+GGG - chr4_4:81696447-81696466 Msa0708230:intron 40.0%
AAATGCTTGTCCCATTTGAG+GGG - chr4_4:81696448-81696467 Msa0708230:intron 40.0%
GCAAAGAAAGCTTGACAGAT+GGG + chr4_4:81696501-81696520 None:intergenic 40.0%
AGCAAAGAAAGCTTGACAGA+TGG + chr4_4:81696502-81696521 None:intergenic 40.0%
!! GCTTTATGGTGGATATAGCT+TGG - chr4_4:81696519-81696538 Msa0708230:intron 40.0%
GGAACATGATTATACCACCT+TGG - chr4_4:81696681-81696700 Msa0708230:intron 40.0%
! AAAGCTCTGATGTCATGTCA+AGG - chr4_4:81696709-81696728 Msa0708230:intron 40.0%
ACGATAAACTCATTCGTCGT+AGG + chr4_4:81696901-81696920 None:intergenic 40.0%
AAAGAGTGGCAATTCTCTGA+TGG - chr4_4:81697197-81697216 Msa0708230:CDS 40.0%
! CTTAAGTGATTTCTGAGGAC+TGG + chr4_4:81697249-81697268 None:intergenic 40.0%
CAGTCCTCAGAAATCACTTA+AGG - chr4_4:81697247-81697266 Msa0708230:CDS 40.0%
GATCCCTTAAGTGATTTCTG+AGG + chr4_4:81697254-81697273 None:intergenic 40.0%
GATAACTGTTGTGGAAGCAA+AGG - chr4_4:81697309-81697328 Msa0708230:CDS 40.0%
! AATTTGGAAGGACTGGTACA+AGG - chr4_4:81697717-81697736 Msa0708230:intron 40.0%
! ATTTGGAAGGACTGGTACAA+GGG - chr4_4:81697718-81697737 Msa0708230:intron 40.0%
GTGTCCATTTCAAAGGAGTA+GGG + chr4_4:81697928-81697947 None:intergenic 40.0%
TGTGTCCATTTCAAAGGAGT+AGG + chr4_4:81697929-81697948 None:intergenic 40.0%
CTTATTGCTGCTGATCTTAG+AGG - chr4_4:81698010-81698029 Msa0708230:intron 40.0%
! GACAAGTGATCCTTTTGTGA+GGG - chr4_4:81698033-81698052 Msa0708230:intron 40.0%
CCATAGTTTACCCTCACAAA+AGG + chr4_4:81698046-81698065 None:intergenic 40.0%
! CCTTTTGTGAGGGTAAACTA+TGG - chr4_4:81698043-81698062 Msa0708230:intron 40.0%
TTACTGTGGCATTATCTGGT+AGG - chr4_4:81698259-81698278 Msa0708230:CDS 40.0%
ACCTTAGAGTTCCTAGATGA+TGG - chr4_4:81698317-81698336 Msa0708230:intron 40.0%
TCCATCATCTAGGAACTCTA+AGG + chr4_4:81698321-81698340 None:intergenic 40.0%
TCCTTTACATGCAATGTCAG+GGG + chr4_4:81698347-81698366 None:intergenic 40.0%
GTCCTTTACATGCAATGTCA+GGG + chr4_4:81698348-81698367 None:intergenic 40.0%
CAAGATAATCTTACCTGGCT+AGG + chr4_4:81698578-81698597 None:intergenic 40.0%
AGAGCTGAAAAGGTAACCAA+AGG + chr4_4:81698633-81698652 None:intergenic 40.0%
CTTCATCATCAGAGCTGAAA+AGG + chr4_4:81698643-81698662 None:intergenic 40.0%
! TGCATGCGACAACATTTTAC+AGG - chr4_4:81698690-81698709 Msa0708230:intron 40.0%
! ACTCTAGAGGATACACAAGA+AGG - chr4_4:81699122-81699141 Msa0708230:intron 40.0%
! CTCTAGAGGATACACAAGAA+GGG - chr4_4:81699123-81699142 Msa0708230:intron 40.0%
AATTCTTCTCCATCCCTCAA+CGG - chr4_4:81699218-81699237 Msa0708230:CDS 40.0%
TCAATTTCCACTTCCGTTGA+GGG + chr4_4:81699234-81699253 None:intergenic 40.0%
ATCAATTTCCACTTCCGTTG+AGG + chr4_4:81699235-81699254 None:intergenic 40.0%
CTTACAAACACTACGTGACA+TGG + chr4_4:81699347-81699366 None:intergenic 40.0%
TGCAGTATGGGAATTACCAG+CGG - chr4_4:81693476-81693495 Msa0708230:intron 45.0%
TTACCAGCGGAAAATGCTTG+AGG - chr4_4:81693489-81693508 Msa0708230:intron 45.0%
! TTTGAGTTAGTCGGTGAGTG+TGG - chr4_4:81693786-81693805 Msa0708230:intron 45.0%
TTGACAGCGACTCCTGAAAA+TGG - chr4_4:81694240-81694259 Msa0708230:intron 45.0%
TGACAGCGACTCCTGAAAAT+GGG - chr4_4:81694241-81694260 Msa0708230:intron 45.0%
ATGGTTGCTAAGCTTTCCGT+TGG - chr4_4:81694298-81694317 Msa0708230:intron 45.0%
CACAATTCTGGCAGTACCAA+CGG + chr4_4:81694317-81694336 None:intergenic 45.0%
! TAGGAATTGCCTTTGGAAGC+GGG - chr4_4:81694678-81694697 Msa0708230:intron 45.0%
GGGAGAGGCAAAGAATGAAA+AGG + chr4_4:81694851-81694870 None:intergenic 45.0%
AGAATGAATGAGCATGGGAG+AGG + chr4_4:81694866-81694885 None:intergenic 45.0%
CTCCCATGCTCATTCATTCT+TGG - chr4_4:81694866-81694885 Msa0708230:CDS 45.0%
CATCATATGACACAGCACTG+GGG + chr4_4:81694943-81694962 None:intergenic 45.0%
CACTTTGGTAAAGACCATGG+TGG - chr4_4:81695012-81695031 Msa0708230:intron 45.0%
! TAAAGACCATGGTGGAACCT+CGG - chr4_4:81695020-81695039 Msa0708230:intron 45.0%
TTCAAGGGGAGGCAACAAAA+TGG - chr4_4:81695145-81695164 Msa0708230:CDS 45.0%
AGAAGAAAACGTGAGCGACA+AGG - chr4_4:81695186-81695205 Msa0708230:intron 45.0%
GGACTTGCAGACATTTGTAG+AGG - chr4_4:81695207-81695226 Msa0708230:intron 45.0%
ATTTGTAGAGGTAGAAGCGG+AGG - chr4_4:81695219-81695238 Msa0708230:intron 45.0%
TCATACTTCACACTGTCAGG+GGG + chr4_4:81695358-81695377 None:intergenic 45.0%
GTCATACTTCACACTGTCAG+GGG + chr4_4:81695359-81695378 None:intergenic 45.0%
CACTCTCAACTATTGTGCCA+CGG - chr4_4:81695548-81695567 Msa0708230:intron 45.0%
! AGATGATTGTAGTGGGGGTT+TGG + chr4_4:81695758-81695777 None:intergenic 45.0%
GGCTTAGATGATTGTAGTGG+GGG + chr4_4:81695763-81695782 None:intergenic 45.0%
AAAGGATGGGGAAAAGCTGT+TGG + chr4_4:81695784-81695803 None:intergenic 45.0%
AATATGTACACCACCACCCA+TGG - chr4_4:81695807-81695826 Msa0708230:intron 45.0%
CTATAGGCATGTGTGACCAT+GGG + chr4_4:81695826-81695845 None:intergenic 45.0%
TCTATAGGCATGTGTGACCA+TGG + chr4_4:81695827-81695846 None:intergenic 45.0%
! ATGGCAACGACGAGTTTTTC+TGG - chr4_4:81696048-81696067 Msa0708230:CDS 45.0%
! TGGCAACGACGAGTTTTTCT+GGG - chr4_4:81696049-81696068 Msa0708230:CDS 45.0%
ATTGCTCTGTTCTCGGTTAC+CGG + chr4_4:81696189-81696208 None:intergenic 45.0%
CCACATCATTGCTCTGTTCT+CGG + chr4_4:81696196-81696215 None:intergenic 45.0%
!! GACGACATTTTGACAATCGC+TGG + chr4_4:81696241-81696260 None:intergenic 45.0%
AATGCTTGTCCCATTTGAGG+GGG - chr4_4:81696449-81696468 Msa0708230:intron 45.0%
! CATCAGAGCTTTTGTGACCA+AGG + chr4_4:81696701-81696720 None:intergenic 45.0%
TTGCAGTATGGAAAGGTGAG+AGG - chr4_4:81697379-81697398 Msa0708230:CDS 45.0%
! TATGGAAAGGTGAGAGGTAC+TGG - chr4_4:81697385-81697404 Msa0708230:CDS 45.0%
GTATCATTCCAGACAGCAGT+TGG + chr4_4:81697600-81697619 None:intergenic 45.0%
ACTGGTACAAGGGTCAATCA+GGG - chr4_4:81697728-81697747 Msa0708230:intron 45.0%
CAGAACTCACTCCTTCAAGT+GGG + chr4_4:81697764-81697783 None:intergenic 45.0%
AATTTGGGTGGAGAACCAAG+AGG - chr4_4:81697809-81697828 Msa0708230:CDS 45.0%
ATTTGGGTGGAGAACCAAGA+GGG - chr4_4:81697810-81697829 Msa0708230:CDS 45.0%
AGCATACCTTTGATCCCTCT+TGG + chr4_4:81697827-81697846 None:intergenic 45.0%
! CAAGCCCTACTCCTTTGAAA+TGG - chr4_4:81697921-81697940 Msa0708230:intron 45.0%
GGACTCTGTGTCCATTTCAA+AGG + chr4_4:81697935-81697954 None:intergenic 45.0%
! GGACAAGTGATCCTTTTGTG+AGG - chr4_4:81698032-81698051 Msa0708230:intron 45.0%
ACAAAACTGTCAACCCTCGT+TGG - chr4_4:81698288-81698307 Msa0708230:intron 45.0%
CAAAACTGTCAACCCTCGTT+GGG - chr4_4:81698289-81698308 Msa0708230:intron 45.0%
!! CATCTAGGAACTCTAAGGTC+TGG + chr4_4:81698316-81698335 None:intergenic 45.0%
TCCCCTGACATTGCATGTAA+AGG - chr4_4:81698343-81698362 Msa0708230:intron 45.0%
GGTCCTTTACATGCAATGTC+AGG + chr4_4:81698349-81698368 None:intergenic 45.0%
ACAAGTGGATACCTCTCCAA+GGG - chr4_4:81698447-81698466 Msa0708230:CDS 45.0%
! GTCAAAGAAGGTACAGAGTC+TGG + chr4_4:81698539-81698558 None:intergenic 45.0%
ATTACACCAGATTCCTAGCC+AGG - chr4_4:81698562-81698581 Msa0708230:intron 45.0%
ATCTTACCTGGCTAGGAATC+TGG + chr4_4:81698571-81698590 None:intergenic 45.0%
GAGCGAGTTAGAAACTCTAG+AGG - chr4_4:81699109-81699128 Msa0708230:intron 45.0%
! AGAAGGGTATATAGCCCAGT+TGG - chr4_4:81699139-81699158 Msa0708230:intron 45.0%
CATTTGCTCAGTCTCCAACT+GGG + chr4_4:81699156-81699175 None:intergenic 45.0%
AGCACTTCAACCCTTTCCTG+CGG + chr4_4:81693995-81694014 None:intergenic 50.0%
ATCCCTTGAAGGCCCAAACT+GGG + chr4_4:81694043-81694062 None:intergenic 50.0%
AATCCCTTGAAGGCCCAAAC+TGG + chr4_4:81694044-81694063 None:intergenic 50.0%
TGGGCCTTCAAGGGATTAGA+TGG - chr4_4:81694047-81694066 Msa0708230:CDS 50.0%
GGGATTAGATGGTCAACCTC+TGG - chr4_4:81694058-81694077 Msa0708230:CDS 50.0%
ATGGTCAACCTCTGGTGATC+AGG - chr4_4:81694066-81694085 Msa0708230:CDS 50.0%
! AGGAATTGCCTTTGGAAGCG+GGG - chr4_4:81694679-81694698 Msa0708230:intron 50.0%
AGAAACACCAGGCAACTCAG+TGG + chr4_4:81694717-81694736 None:intergenic 50.0%
AGTTGCCTGGTGTTTCTCCT+TGG - chr4_4:81694720-81694739 Msa0708230:CDS 50.0%
CTGCAGGCAAACTGAAACAG+CGG + chr4_4:81695048-81695067 None:intergenic 50.0%
! AGGAGAACAGGTGTGCGTTT+TGG - chr4_4:81695250-81695269 Msa0708230:intron 50.0%
CATACTTCACACTGTCAGGG+GGG + chr4_4:81695357-81695376 None:intergenic 50.0%
AGTTGGTTGTGGGTACGAGA+TGG + chr4_4:81695726-81695745 None:intergenic 50.0%
! GCTAGGATGGAGTTGGTTGT+GGG + chr4_4:81695736-81695755 None:intergenic 50.0%
! ATTGTAGTGGGGGTTTGGCT+AGG + chr4_4:81695753-81695772 None:intergenic 50.0%
! GACGAGTTTTTCTGGGCAAG+AGG - chr4_4:81696056-81696075 Msa0708230:CDS 50.0%
CCGAGAACAGAGCAATGATG+TGG - chr4_4:81696193-81696212 Msa0708230:intron 50.0%
CGATGAGAAGATGAGGCATG+TGG - chr4_4:81696341-81696360 Msa0708230:intron 50.0%
TGAGAAGATGAGGCATGTGG+AGG - chr4_4:81696344-81696363 Msa0708230:intron 50.0%
!! CTGATTTGGCCCCCTCAAAT+GGG + chr4_4:81696461-81696480 None:intergenic 50.0%
! CAGAGCTTTTGTGACCAAGG+TGG + chr4_4:81696698-81696717 None:intergenic 50.0%
AAGAGCGGAAATGTCTCTGC+GGG + chr4_4:81697061-81697080 None:intergenic 50.0%
CAAGAGCGGAAATGTCTCTG+CGG + chr4_4:81697062-81697081 None:intergenic 50.0%
! ATTTCTGAGGACTGGCATGG+AGG + chr4_4:81697241-81697260 None:intergenic 50.0%
! GTGATTTCTGAGGACTGGCA+TGG + chr4_4:81697244-81697263 None:intergenic 50.0%
ACAGCAGTTGGAGTAGTAGG+AGG + chr4_4:81697588-81697607 None:intergenic 50.0%
CAGACAGCAGTTGGAGTAGT+AGG + chr4_4:81697591-81697610 None:intergenic 50.0%
CTACTACTCCAACTGCTGTC+TGG - chr4_4:81697589-81697608 Msa0708230:intron 50.0%
GACTGGTACAAGGGTCAATC+AGG - chr4_4:81697727-81697746 Msa0708230:intron 50.0%
AAGGGTCAATCAGGGACGTA+TGG - chr4_4:81697736-81697755 Msa0708230:intron 50.0%
GACGTATGGATCCCACTTGA+AGG - chr4_4:81697750-81697769 Msa0708230:intron 50.0%
CCAGAACTCACTCCTTCAAG+TGG + chr4_4:81697765-81697784 None:intergenic 50.0%
CCACTTGAAGGAGTGAGTTC+TGG - chr4_4:81697762-81697781 Msa0708230:intron 50.0%
GGAGAACCAAGAGGGATCAA+AGG - chr4_4:81697818-81697837 Msa0708230:CDS 50.0%
ATGGACACAGAGTCCACCAT+CGG - chr4_4:81697940-81697959 Msa0708230:intron 50.0%
! GGATGTTTGGTTCACGCAAG+AGG + chr4_4:81698113-81698132 None:intergenic 50.0%
TCAGGGGACTTCCATCATCT+AGG + chr4_4:81698331-81698350 None:intergenic 50.0%
CACTTGTCTGACGTCTGGTT+CGG + chr4_4:81698434-81698453 None:intergenic 50.0%
GTATCCACTTGTCTGACGTC+TGG + chr4_4:81698439-81698458 None:intergenic 50.0%
GACAAGTGGATACCTCTCCA+AGG - chr4_4:81698446-81698465 Msa0708230:CDS 50.0%
CAAGTGGATACCTCTCCAAG+GGG - chr4_4:81698448-81698467 Msa0708230:CDS 50.0%
!! AGAGAAGTGCCCCCAAGAAA+TGG + chr4_4:81698833-81698852 None:intergenic 50.0%
GCATTTGCTCAGTCTCCAAC+TGG + chr4_4:81699157-81699176 None:intergenic 50.0%
TTTCCACTTCCGTTGAGGGA+TGG + chr4_4:81699230-81699249 None:intergenic 50.0%
AGTGCAGCTAGGAGAAGACT+TGG + chr4_4:81699398-81699417 None:intergenic 50.0%
ACAGATTGTGGAGTGCAGCT+AGG + chr4_4:81699409-81699428 None:intergenic 50.0%
! CCTCCTCAAGCATTTTCCGC+TGG + chr4_4:81693495-81693514 None:intergenic 55.0%
CCAGCGGAAAATGCTTGAGG+AGG - chr4_4:81693492-81693511 Msa0708230:intron 55.0%
GCAGGAAAGGGTTGAAGTGC+TGG - chr4_4:81693994-81694013 Msa0708230:CDS 55.0%
CTTGAAGGCCCAAACTGGGA+GGG + chr4_4:81694039-81694058 None:intergenic 55.0%
CTCCCAGTTTGGGCCTTCAA+GGG - chr4_4:81694038-81694057 Msa0708230:CDS 55.0%
! GGAATTGCCTTTGGAAGCGG+GGG - chr4_4:81694680-81694699 Msa0708230:intron 55.0%
CAGGCAACTCAGTGGCTGAT+TGG + chr4_4:81694709-81694728 None:intergenic 55.0%
CAATCAGCCACTGAGTTGCC+TGG - chr4_4:81694707-81694726 Msa0708230:CDS 55.0%
ACCAGCCAAGGAGAAACACC+AGG + chr4_4:81694728-81694747 None:intergenic 55.0%
CTAGGAGTTGCTTCAAGGGG+AGG - chr4_4:81695134-81695153 Msa0708230:intron 55.0%
TAGAAGCGGAGGAGCTGACA+AGG - chr4_4:81695230-81695249 Msa0708230:intron 55.0%
GAGGAGCTGACAAGGAGAAC+AGG - chr4_4:81695238-81695257 Msa0708230:intron 55.0%
GTTGTGGGTACGAGATGGTG+TGG + chr4_4:81695721-81695740 None:intergenic 55.0%
! GGCTAGGATGGAGTTGGTTG+TGG + chr4_4:81695737-81695756 None:intergenic 55.0%
GGGTTTGGCTAGGATGGAGT+TGG + chr4_4:81695743-81695762 None:intergenic 55.0%
TAGTGGGGGTTTGGCTAGGA+TGG + chr4_4:81695749-81695768 None:intergenic 55.0%
TAGGCATGTGTGACCATGGG+TGG + chr4_4:81695823-81695842 None:intergenic 55.0%
TGGGCAATAGGGCCTGATTC+TGG - chr4_4:81696384-81696403 Msa0708230:intron 55.0%
!! GCTGATTTGGCCCCCTCAAA+TGG + chr4_4:81696462-81696481 None:intergenic 55.0%
AGAGCGGAAATGTCTCTGCG+GGG + chr4_4:81697060-81697079 None:intergenic 55.0%
GCAGTTGGAGTAGTAGGAGG+AGG + chr4_4:81697585-81697604 None:intergenic 55.0%
TGGACACAGAGTCCACCATC+GGG - chr4_4:81697941-81697960 Msa0708230:intron 55.0%
CAACCATTCGTCATGCCCGA+TGG + chr4_4:81697959-81697978 None:intergenic 55.0%
CATCGGGCATGACGAATGGT+TGG - chr4_4:81697957-81697976 Msa0708230:intron 55.0%
CTAAGGTCTGGTCCCAACGA+GGG + chr4_4:81698304-81698323 None:intergenic 55.0%
! TCTAAGGTCTGGTCCCAACG+AGG + chr4_4:81698305-81698324 None:intergenic 55.0%
!! TTGTCTGACGTCTGGTTCGG+AGG + chr4_4:81698431-81698450 None:intergenic 55.0%
CGAACCAGACGTCAGACAAG+TGG - chr4_4:81698432-81698451 Msa0708230:intron 55.0%
!! CCACTTTTCACCCCTTGGAG+AGG + chr4_4:81698461-81698480 None:intergenic 55.0%
CCTCTCCAAGGGGTGAAAAG+TGG - chr4_4:81698458-81698477 Msa0708230:CDS 55.0%
!!! TCTCGCCACTTTTCACCCCT+TGG + chr4_4:81698466-81698485 None:intergenic 55.0%
TCTCCATCCCTCAACGGAAG+TGG - chr4_4:81699224-81699243 Msa0708230:CDS 55.0%
TGGATCACGCCCTCCCAGTT+TGG - chr4_4:81694027-81694046 Msa0708230:CDS 60.0%
GGATCACGCCCTCCCAGTTT+GGG - chr4_4:81694028-81694047 Msa0708230:CDS 60.0%
CCTTGAAGGCCCAAACTGGG+AGG + chr4_4:81694040-81694059 None:intergenic 60.0%
CCTCCCAGTTTGGGCCTTCA+AGG - chr4_4:81694037-81694056 Msa0708230:CDS 60.0%
TTGGCTTCCCCCGCTTCCAA+AGG + chr4_4:81694690-81694709 None:intergenic 60.0%
GCCTGGTGTTTCTCCTTGGC+TGG - chr4_4:81694724-81694743 Msa0708230:CDS 60.0%
AAACTGAAACAGCGGCGCCG+AGG + chr4_4:81695040-81695059 None:intergenic 60.0%
GCATGTGTGACCATGGGTGG+TGG + chr4_4:81695820-81695839 None:intergenic 60.0%
TGAGGGGGCCAAATCAGCAG+AGG - chr4_4:81696464-81696483 Msa0708230:intron 60.0%
! CTGAGGACTGGCATGGAGGT+TGG + chr4_4:81697237-81697256 None:intergenic 60.0%
CCATTCGTCATGCCCGATGG+TGG + chr4_4:81697956-81697975 None:intergenic 60.0%
CCACCATCGGGCATGACGAA+TGG - chr4_4:81697953-81697972 Msa0708230:intron 60.0%
!! CTGACGTCTGGTTCGGAGGA+AGG + chr4_4:81698427-81698446 None:intergenic 60.0%
! GCGGCGCCGAGGTTCCACCA+TGG + chr4_4:81695029-81695048 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr4_4 gene 81692976 81699552 81692976 ID=Msa0708230;Name=Msa0708230
chr4_4 mRNA 81692976 81699552 81692976 ID=Msa0708230-mRNA-1;Parent=Msa0708230;Name=Msa0708230-mRNA-1;_AED=0.11;_eAED=0.11;_QI=199|0.92|0.86|1|1|1|15|299|786
chr4_4 exon 81692976 81693490 81692976 ID=Msa0708230-mRNA-1:exon:26865;Parent=Msa0708230-mRNA-1
chr4_4 exon 81693945 81694247 81693945 ID=Msa0708230-mRNA-1:exon:26864;Parent=Msa0708230-mRNA-1
chr4_4 exon 81694441 81694578 81694441 ID=Msa0708230-mRNA-1:exon:26863;Parent=Msa0708230-mRNA-1
chr4_4 exon 81694689 81694970 81694689 ID=Msa0708230-mRNA-1:exon:26862;Parent=Msa0708230-mRNA-1
chr4_4 exon 81695135 81695202 81695135 ID=Msa0708230-mRNA-1:exon:26861;Parent=Msa0708230-mRNA-1
chr4_4 exon 81695310 81695352 81695310 ID=Msa0708230-mRNA-1:exon:26860;Parent=Msa0708230-mRNA-1
chr4_4 exon 81696043 81696177 81696043 ID=Msa0708230-mRNA-1:exon:26859;Parent=Msa0708230-mRNA-1
chr4_4 exon 81697126 81697533 81697126 ID=Msa0708230-mRNA-1:exon:26858;Parent=Msa0708230-mRNA-1
chr4_4 exon 81697783 81697920 81697783 ID=Msa0708230-mRNA-1:exon:26857;Parent=Msa0708230-mRNA-1
chr4_4 exon 81698165 81698281 81698165 ID=Msa0708230-mRNA-1:exon:26856;Parent=Msa0708230-mRNA-1
chr4_4 exon 81698441 81698530 81698441 ID=Msa0708230-mRNA-1:exon:26855;Parent=Msa0708230-mRNA-1
chr4_4 exon 81698645 81698677 81698645 ID=Msa0708230-mRNA-1:exon:26854;Parent=Msa0708230-mRNA-1
chr4_4 exon 81698776 81698883 81698776 ID=Msa0708230-mRNA-1:exon:26853;Parent=Msa0708230-mRNA-1
chr4_4 exon 81698973 81699047 81698973 ID=Msa0708230-mRNA-1:exon:26852;Parent=Msa0708230-mRNA-1
chr4_4 exon 81699147 81699552 81699147 ID=Msa0708230-mRNA-1:exon:26851;Parent=Msa0708230-mRNA-1
chr4_4 five_prime_UTR 81699354 81699552 81699354 ID=Msa0708230-mRNA-1:five_prime_utr;Parent=Msa0708230-mRNA-1
chr4_4 CDS 81699147 81699353 81699147 ID=Msa0708230-mRNA-1:cds;Parent=Msa0708230-mRNA-1
chr4_4 CDS 81698973 81699047 81698973 ID=Msa0708230-mRNA-1:cds;Parent=Msa0708230-mRNA-1
chr4_4 CDS 81698776 81698883 81698776 ID=Msa0708230-mRNA-1:cds;Parent=Msa0708230-mRNA-1
chr4_4 CDS 81698645 81698677 81698645 ID=Msa0708230-mRNA-1:cds;Parent=Msa0708230-mRNA-1
chr4_4 CDS 81698441 81698530 81698441 ID=Msa0708230-mRNA-1:cds;Parent=Msa0708230-mRNA-1
chr4_4 CDS 81698165 81698281 81698165 ID=Msa0708230-mRNA-1:cds;Parent=Msa0708230-mRNA-1
chr4_4 CDS 81697783 81697920 81697783 ID=Msa0708230-mRNA-1:cds;Parent=Msa0708230-mRNA-1
chr4_4 CDS 81697126 81697533 81697126 ID=Msa0708230-mRNA-1:cds;Parent=Msa0708230-mRNA-1
chr4_4 CDS 81696043 81696177 81696043 ID=Msa0708230-mRNA-1:cds;Parent=Msa0708230-mRNA-1
chr4_4 CDS 81695310 81695352 81695310 ID=Msa0708230-mRNA-1:cds;Parent=Msa0708230-mRNA-1
chr4_4 CDS 81695135 81695202 81695135 ID=Msa0708230-mRNA-1:cds;Parent=Msa0708230-mRNA-1
chr4_4 CDS 81694689 81694970 81694689 ID=Msa0708230-mRNA-1:cds;Parent=Msa0708230-mRNA-1
chr4_4 CDS 81694441 81694578 81694441 ID=Msa0708230-mRNA-1:cds;Parent=Msa0708230-mRNA-1
chr4_4 CDS 81693945 81694247 81693945 ID=Msa0708230-mRNA-1:cds;Parent=Msa0708230-mRNA-1
chr4_4 CDS 81693275 81693490 81693275 ID=Msa0708230-mRNA-1:cds;Parent=Msa0708230-mRNA-1
chr4_4 three_prime_UTR 81692976 81693274 81692976 ID=Msa0708230-mRNA-1:three_prime_utr;Parent=Msa0708230-mRNA-1
Gene Sequence

>Msa0708230

ATGAGTAGCAGTAAGAAAAGTTTGATCATTACCAATAATTTGGAAGAAGCTTCAGTGAATTTGTTAAACCAATTAGTGAAAGTGAAGCAAAATTCACGGATTTCGTACTTTCTTATTCTCGTTTTCATTGTTTGGCTTATTCACAAATGGATCTTCTCTTTCTCCAATTGCCTTCCAATTATCCTTCTTCTCTTTGCATCTACACAATATGGGAATTACCAGCGGAAAATGCTTGAGGAGGACTTGAACAAGAAATGGAATCGTATCATAGTCAATACTTCGCCTGTCACAACATTGGAACAATGTGAGTGGTTGAATCTATTGTTGTCACAAATATGGTCCAATTATTTTAATCCTAAGCTTTCAACAAGGTTATCAGCCATAGTAGAGAAACGGTTAAAGCTGCGCAAACCAAGATTTATAGAAAGGGTTGAAGTGCTGGAATTTTCACTTGGATCACGCCCTCCCAGTTTGGGCCTTCAAGGGATTAGATGGTCAACCTCTGGTGATCAGCGACTCCTGAAAATGGGTTTTGATTGGGACACGAATGAGATGAGCATTTTGATGGTTGCTAAGCTTTCCGTTGGTACTGCCAGAATTGTGATTAACAGTCTTCATATTAAGGGTGATCTTGTTGTGACACCAATACTAGATGGAAAAGCACTTTTGTATTCATTTGTATCTACACCTGAGGTTAGAATAGGAATTGCCTTTGGAAGCGGGGGAAGCCAATCAGCCACTGAGTTGCCTGGTGTTTCTCCTTGGCTGGTTAAACTTTTTACTGACACTTTGGTAAAGACCATGGTGGAACCTCGGCGCCGCTGTTTCAGTTTGCCTGCAGTTGATTTAAGGAAGTATGCTGTTGGAGGCACAATATATGTTTCAGTGATTTCTGGAAACAAACTTTCTAGGAGTTGCTTCAAGGGGAGGCAACAAAATGGCACAAGTAATGGCTGTTTAGAAGAAAACGTGAGCGACAAGGACTTGCAGACATTTGTAGAGGTAGAAGCGGAGGAGCTGACAAGGAGAACAGGTGTGCGTTTTGGTTCAACTCCAAGATGGGATACGACATTTAATATGGTTTTACATGATAATACAGGAATAGTTCGCTTCAATCTTTATCAGTGCCCCCCTGACAGTGTGAAGTATGACTACCTAGCATCTTGTGAAATTAAGATGAGGCATGTGGAGGATGATTCAACAATTGTGTGGGCAATAGGGCCTGATTCTGGTGTAATAGCAAAACATGCAAAGTTATGTGGAGAGGAAGTTGAAATGCTTGTCCCATTTGAGGGGGCCAAATCAGCAGAGTTAAAGGTGAGAATTGTAGTGAAAGAGTGGCAATTCTCTGATGCAAAGGATCTTGATGCAAAAGACAGATTTGGAAAATTTGACCCTTACATTAAGTTGCAGTATGGAAAGGTTGTCATGAAAACAAAGATTGCTCCTCCTCCTACTACTCCAACTGCTGTCTGGAATGATACTTTTGAGGTAGATGAGAATAGTGGTGATGAATACCTAATTGTGAAATGCTTTAGTGAAGAAATTTTTGGAGATGAAAACATTGGTAGTGCACATGTAAATTTGGAAGGACTGGTACAAGGGTCAATCAGGGACGTATGGATCCCACTTGAAGGAGTGAGTTCTGGTGAATTAAGACTTAAAATAGAAGCAATTTGGGTGGAGAACCAAGAGGGATCAAAGAGTCCACCATCGGGCATGACGAATGGTTGGATTGAACTTGTTCTTATTGAAGCGAGGGATCTTATTGCTGCTGATCTTAGAGGGACAAGTGATCCTTTTGTGAGGGTAAACTATGGAAACTTAAAGAAAAGAACAAAGGTTGTACACAAAACTGTCAACCCTCGTTGGGACCAGACCTTAGAGTTCCTAGATGATGGAAGTCCCCTGACATTGCATGTAAAGGACCATAATGCTTTACTACCCACATCAAGTATAGGTGAATGTGTTGTAGAATATCAAAGCCTTCCTCCGAACCAGACGTCAGACAAGTGGATACCTCTCCAAGGGGTGAAAAGTGGCGAGATCCACATCCAAATCACAAGAAAAGTTCCAGAGATTCAAACAAGACAATCTCCAGACTCTGTACCTTCTTTGACTAAATTACACCAGATTCCTAGCCAGATAAAGGAGATGACAAAAAAGATTCGGTCTTTAATAGTGGATGGAAATCTGGAAGAACTGTCTACAACTTTGAGCGAGTTAGAAACTCTAGAGGATACACAAGAAGGGTATATAGCCCAGTTGGAGACTGAGCAAATGCTTCTTATCAGCAAAATAAATGAACTGGGCCAAGAGATCATAAATTCTTCTCCATCCCTCAACGGAAGTGGAAATTGA
Protein sequence

>Msa0708230

MSSSKKSLIITNNLEEASVNLLNQLVKVKQNSRISYFLILVFIVWLIHKWIFSFSNCLPIILLLFASTQYGNYQRKMLEEDLNKKWNRIIVNTSPVTTLEQCEWLNLLLSQIWSNYFNPKLSTRLSAIVEKRLKLRKPRFIERVEVLEFSLGSRPPSLGLQGIRWSTSGDQRLLKMGFDWDTNEMSILMVAKLSVGTARIVINSLHIKGDLVVTPILDGKALLYSFVSTPEVRIGIAFGSGGSQSATELPGVSPWLVKLFTDTLVKTMVEPRRRCFSLPAVDLRKYAVGGTIYVSVISGNKLSRSCFKGRQQNGTSNGCLEENVSDKDLQTFVEVEAEELTRRTGVRFGSTPRWDTTFNMVLHDNTGIVRFNLYQCPPDSVKYDYLASCEIKMRHVEDDSTIVWAIGPDSGVIAKHAKLCGEEVEMLVPFEGAKSAELKVRIVVKEWQFSDAKDLDAKDRFGKFDPYIKLQYGKVVMKTKIAPPPTTPTAVWNDTFEVDENSGDEYLIVKCFSEEIFGDENIGSAHVNLEGLVQGSIRDVWIPLEGVSSGELRLKIEAIWVENQEGSKSPPSGMTNGWIELVLIEARDLIAADLRGTSDPFVRVNYGNLKKRTKVVHKTVNPRWDQTLEFLDDGSPLTLHVKDHNALLPTSSIGECVVEYQSLPPNQTSDKWIPLQGVKSGEIHIQITRKVPEIQTRQSPDSVPSLTKLHQIPSQIKEMTKKIRSLIVDGNLEELSTTLSELETLEDTQEGYIAQLETEQMLLISKINELGQEIINSSPSLNGSGN*