AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0053480


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0053480 MtrunA17_Chr1g0151351 96.407 334 6 1 1 328 1 334 0.0 670
Msa0053480 MtrunA17_Chr2g0330171 60.185 324 79 10 11 288 1 320 8.14e-121 355
Msa0053480 MtrunA17_Chr8g0342421 54.802 354 91 10 1 288 1 351 8.21e-117 347
Msa0053480 MtrunA17_Chr1g0185121 53.293 334 111 8 11 299 6 339 2.80e-110 328
Msa0053480 MtrunA17_Chr8g0373541 73.057 193 46 2 10 197 3 194 3.22e-102 310
Msa0053480 MtrunA17_Chr1g0181381 49.853 339 76 8 41 288 38 373 4.95e-100 303
Msa0053480 MtrunA17_Chr4g0040571 74.725 182 41 1 32 208 30 211 6.56e-100 303
Msa0053480 MtrunA17_Chr7g0263941 55.776 303 108 8 16 295 9 308 8.22e-100 300
Msa0053480 MtrunA17_Chr4g0029521 70.619 194 50 2 16 202 12 205 3.97e-98 298
Msa0053480 MtrunA17_Chr1g0191991 55.068 296 91 7 35 289 57 351 9.22e-97 296
Msa0053480 MtrunA17_Chr1g0199101 73.913 184 41 3 38 216 45 226 3.77e-96 295
Msa0053480 MtrunA17_Chr2g0326381 73.714 175 40 1 40 208 31 205 1.58e-95 289
Msa0053480 MtrunA17_Chr1g0162971 77.778 162 31 1 41 197 41 202 2.99e-95 289
Msa0053480 MtrunA17_Chr1g0163001 68.966 203 52 4 9 205 16 213 2.59e-94 289
Msa0053480 MtrunA17_Chr1g0210821 78.981 157 28 1 44 195 47 203 6.46e-93 287
Msa0053480 MtrunA17_Chr7g0268961 53.310 287 83 8 51 288 32 316 3.88e-90 278
Msa0053480 MtrunA17_Chr3g0141431 48.185 303 103 6 38 289 19 318 1.06e-86 266
Msa0053480 MtrunA17_Chr2g0324991 77.863 131 24 1 52 177 3 133 6.44e-73 222
Msa0053480 MtrunA17_Chr6g0479921 42.373 295 134 9 25 289 18 306 1.61e-67 219
Msa0053480 MtrunA17_Chr8g0375521 52.973 185 74 3 14 191 6 184 8.73e-66 213
Msa0053480 MtrunA17_Chr1g0200421 32.450 151 85 3 55 188 236 386 8.01e-21 92.8
Msa0053480 MtrunA17_Chr5g0422571 32.178 202 113 8 5 190 55 248 8.80e-21 90.9
Msa0053480 MtrunA17_Chr3g0123941 34.437 151 86 4 51 188 118 268 2.37e-20 90.1
Msa0053480 MtrunA17_Chr2g0320341 29.293 198 120 4 7 185 182 378 2.83e-19 87.8
Msa0053480 MtrunA17_Chr7g0258011 32.515 163 87 5 62 202 181 342 1.30e-18 85.5
Msa0053480 MtrunA17_Chr8g0352011 33.129 163 86 6 62 202 171 332 2.50e-18 84.3
Msa0053480 MtrunA17_Chr4g0053341 32.278 158 91 5 45 188 63 218 6.94e-18 81.3
Msa0053480 MtrunA17_Chr1g0198651 32.500 160 89 5 47 188 91 249 9.56e-18 82.0
Msa0053480 MtrunA17_Chr4g0026521 34.043 141 78 4 62 188 123 262 9.87e-18 82.0
Msa0053480 MtrunA17_Chr2g0321291 34.752 141 77 4 62 188 138 277 2.69e-17 81.3
Msa0053480 MtrunA17_Chr8g0382121 33.784 148 82 5 54 185 109 256 2.98e-17 80.9
Msa0053480 MtrunA17_Chr1g0173841 34.043 141 78 4 62 188 220 359 3.08e-17 81.6
Msa0053480 MtrunA17_Chr2g0328921 33.333 141 79 4 62 188 143 282 1.93e-16 78.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0053480 AT1G55110.3 57.895 323 93 8 7 288 17 337 2.49e-113 336
Msa0053480 AT1G55110.1 57.895 323 93 8 7 288 17 337 2.49e-113 336
Msa0053480 AT1G55110.2 57.895 323 93 8 7 288 17 337 2.49e-113 336
Msa0053480 AT5G66730.1 72.449 196 40 4 10 197 4 193 3.46e-100 304
Msa0053480 AT3G50700.1 69.697 198 52 2 5 197 1 195 5.06e-99 300
Msa0053480 AT3G13810.5 66.667 216 46 3 8 197 12 227 1.12e-97 298
Msa0053480 AT3G13810.4 66.667 216 46 3 8 197 17 232 1.15e-97 298
Msa0053480 AT3G13810.1 66.667 216 46 3 8 197 17 232 1.15e-97 298
Msa0053480 AT2G02080.1 76.970 165 33 1 38 197 51 215 7.05e-97 296
Msa0053480 AT2G02080.4 76.970 165 33 1 38 197 51 215 7.05e-97 296
Msa0053480 AT2G02080.5 76.970 165 33 1 38 197 51 215 7.05e-97 296
Msa0053480 AT2G02080.3 76.970 165 33 1 38 197 51 215 7.05e-97 296
Msa0053480 AT5G03150.1 74.719 178 36 2 40 208 52 229 7.72e-97 295
Msa0053480 AT3G45260.2 76.608 171 34 1 40 204 38 208 1.62e-96 293
Msa0053480 AT3G45260.1 76.608 171 34 1 40 204 38 208 1.62e-96 293
Msa0053480 AT1G03840.1 73.714 175 41 1 38 207 38 212 1.05e-95 293
Msa0053480 AT1G14580.1 72.941 170 41 1 33 197 45 214 2.57e-95 290
Msa0053480 AT1G14580.2 72.941 170 41 1 33 197 45 214 2.57e-95 290
Msa0053480 AT3G13810.6 66.197 213 46 3 11 197 1 213 2.74e-95 291
Msa0053480 AT4G02670.1 56.226 265 72 5 41 290 53 288 3.20e-95 288
Msa0053480 AT4G02670.2 56.226 265 72 5 41 290 55 290 3.29e-95 288
Msa0053480 AT1G14580.3 72.941 170 41 1 33 197 59 228 3.71e-95 290
Msa0053480 AT5G44160.1 71.123 187 49 1 24 205 20 206 9.22e-95 289
Msa0053480 AT2G02070.2 78.395 162 30 1 41 197 52 213 6.39e-94 291
Msa0053480 AT2G02070.1 78.395 162 30 1 41 197 52 213 6.39e-94 291
Msa0053480 AT1G03840.2 72.571 175 41 2 38 207 38 210 6.37e-92 283
Msa0053480 AT5G60470.2 72.024 168 41 2 41 202 44 211 4.55e-90 277
Msa0053480 AT5G60470.3 72.024 168 41 2 41 202 40 207 5.87e-90 276
Msa0053480 AT3G13810.2 61.712 222 53 3 8 197 12 233 5.38e-88 273
Msa0053480 AT5G44160.2 74.691 162 36 1 49 205 6 167 1.25e-87 270
Msa0053480 AT3G13810.3 79.605 152 25 1 52 197 68 219 3.55e-87 271
Msa0053480 AT2G02080.6 80.435 138 22 1 65 197 1 138 2.89e-83 259
Msa0053480 AT2G02080.2 80.435 138 22 1 65 197 1 138 2.89e-83 259
Msa0053480 AT5G60470.1 71.975 157 38 2 52 202 46 202 2.44e-82 256
Msa0053480 AT1G68130.1 60.000 170 56 3 29 191 34 198 7.01e-68 218
Msa0053480 AT2G01940.1 59.172 169 61 3 28 189 32 199 2.07e-66 215
Msa0053480 AT1G25250.3 54.737 190 71 5 10 191 9 191 3.39e-65 211
Msa0053480 AT2G01940.3 58.235 170 62 4 28 189 32 200 7.27e-63 206
Msa0053480 AT1G25250.1 59.732 149 52 3 51 191 20 168 3.59e-61 199
Msa0053480 AT1G68130.2 58.929 112 39 2 87 191 1 112 2.27e-40 144
Msa0053480 AT1G25250.2 56.637 113 41 3 87 191 1 113 4.71e-38 137
Msa0053480 AT2G01940.2 57.273 110 40 2 87 189 1 110 1.11e-37 138
Msa0053480 AT1G34370.3 32.278 158 88 3 50 188 14 171 3.09e-21 92.4
Msa0053480 AT1G34370.2 31.579 171 95 4 37 188 214 381 8.07e-21 93.2
Msa0053480 AT1G34370.1 31.579 171 95 4 37 188 214 381 8.07e-21 93.2
Msa0053480 AT5G22890.1 29.651 172 100 4 36 188 185 354 2.90e-18 85.1
Msa0053480 AT1G13290.1 33.121 157 88 5 62 202 93 248 6.67e-18 83.2
Msa0053480 AT3G57670.1 31.176 170 94 5 62 209 209 377 4.94e-17 81.6
Msa0053480 AT1G51220.1 33.333 141 79 5 62 188 170 309 7.05e-17 80.5
Msa0053480 AT3G20880.1 30.247 162 91 5 62 202 248 408 9.03e-17 80.9
Msa0053480 AT1G34790.1 30.612 196 110 6 28 202 107 297 6.33e-16 77.4
Msa0053480 AT1G08290.1 33.099 142 79 4 62 188 172 312 1.29e-15 77.0

Find 114 sgRNAs with CRISPR-Local

Find 187 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCTTTAGTGCCACAAATTT+TGG 0.055414 1_2:+7875850 None:intergenic
CTGCTTAGTGTGGAAATTTC+AGG 0.165111 1_2:+7877319 None:intergenic
GAGGAACAATATTCCCATTT+TGG 0.167286 1_2:-7874778 Msa0053480:three_prime_UTR
AACCATGGCTTTGATGAAAT+TGG 0.176098 1_2:+7875302 None:intergenic
TCATGATAACAAGCCAATTT+TGG 0.179044 1_2:-7877448 Msa0053480:five_prime_UTR
AGTAACCATAATGGAATTTC+TGG 0.229667 1_2:+7875235 None:intergenic
AATTAATTTGAATCCTTCTT+AGG 0.232891 1_2:+7874531 None:intergenic
ATTGTTTGGCTTCTTAATTA+TGG 0.237020 1_2:-7874961 Msa0053480:exon
CCTTGGTGAGGCTGATATTC+AGG 0.253757 1_2:-7874607 Msa0053480:three_prime_UTR
TTTGAGTTGAAAGAATTATT+AGG 0.263924 1_2:+7875163 None:intergenic
AGGAAGATTTCTCTTCCTTT+TGG 0.267985 1_2:+7876778 None:intergenic
CTATACACTTGCTATTAATT+AGG 0.271323 1_2:-7874505 Msa0053480:three_prime_UTR
TTGTTTGGCTTCTTAATTAT+GGG 0.276059 1_2:-7874960 Msa0053480:exon
AACTAGCTAAATCAAGAATT+TGG 0.284765 1_2:+7877279 None:intergenic
TATTGTGGATGAGAAATTAA+AGG 0.289703 1_2:+7877379 None:intergenic
CTAGTTGCTATAGCTAGATT+TGG 0.294047 1_2:-7877262 Msa0053480:five_prime_UTR
CCAAAACACAAAGCCAAAAT+TGG 0.297593 1_2:+7877435 None:intergenic
AGAGACTTGTTCAATATATC+TGG 0.300064 1_2:-7874673 Msa0053480:three_prime_UTR
GGAAACAAAGTTGTAGGGTT+AGG 0.304016 1_2:+7875184 None:intergenic
TGTTTGTTGCTAAGAGAGTT+TGG 0.304831 1_2:+7876164 None:intergenic
ATGCAAACTCACGTGCCTTC+AGG 0.323277 1_2:-7875031 Msa0053480:CDS
TAAGACCAGAAATTCCATTA+TGG 0.323892 1_2:-7875240 Msa0053480:CDS
GTTTGTTGCTAAGAGAGTTT+GGG 0.340724 1_2:+7876165 None:intergenic
TTCAATATATCTGGAATTGA+TGG 0.346876 1_2:-7874664 Msa0053480:three_prime_UTR
ATACTCCATGATTTGGAGAT+TGG 0.358650 1_2:-7874565 Msa0053480:three_prime_UTR
ACCATGGCTTTGATGAAATT+GGG 0.358760 1_2:+7875303 None:intergenic
AAAGTGTCTCTCAGATATAT+TGG 0.359724 1_2:-7876969 Msa0053480:five_prime_UTR
CTAATGCATACTCCATGATT+TGG 0.361070 1_2:-7874572 Msa0053480:three_prime_UTR
ATGGCTTCACGTGAAGAAAT+AGG 0.371641 1_2:-7875001 Msa0053480:CDS
TTATTAGGAAACAAAGTTGT+AGG 0.372201 1_2:+7875178 None:intergenic
AGGGCACTTGGTGACCTAAC+TGG 0.384172 1_2:-7875971 Msa0053480:CDS
GAAACAAAGTTGTAGGGTTA+GGG 0.390096 1_2:+7875185 None:intergenic
AAAGCTAGCACTTGTGCCTC+AGG 0.393473 1_2:+7876193 None:intergenic
CTGCTTACTTGAACTTGAAA+AGG 0.402514 1_2:+7877172 None:intergenic
AGTGCTTCTTGATTCCAGTT+AGG 0.403331 1_2:+7875957 None:intergenic
CAAGAATTGTTTAGATCTTA+CGG 0.403583 1_2:+7877027 None:intergenic
ATTGTGGATGAGAAATTAAA+GGG 0.406146 1_2:+7877380 None:intergenic
TAAAGGGTTGCTTTGAAAGC+TGG 0.410501 1_2:+7877396 None:intergenic
GATAATGGTTCAAATGGGTT+GGG 0.421089 1_2:+7875212 None:intergenic
TGGGAGTGAGAAGAGAATAG+AGG 0.421836 1_2:+7875322 None:intergenic
ACTTTGAAAGAAATCCATCT+TGG 0.435198 1_2:-7877228 Msa0053480:five_prime_UTR
TGATAATGGTTCAAATGGGT+TGG 0.442086 1_2:+7875211 None:intergenic
GGGAGTGAGAAGAGAATAGA+GGG 0.447356 1_2:+7875323 None:intergenic
GCTACTTGCACTAAGTATAT+CGG 0.447719 1_2:+7877060 None:intergenic
GCACGTGAGTTTGCATTAAG+TGG 0.454018 1_2:+7875038 None:intergenic
TCTTGTCATCTCATCATCAT+TGG 0.457129 1_2:+7874726 None:intergenic
GCTTCTTCAGCAACCAAGAA+TGG 0.463212 1_2:-7876830 Msa0053480:CDS
CTTTGAAAGAAATCCATCTT+GGG 0.466963 1_2:-7877227 Msa0053480:five_prime_UTR
GTGTTCACCATGACCCTTCA+AGG 0.470912 1_2:-7875991 Msa0053480:CDS
GAGAGATAATAATAACTTTG+AGG 0.471825 1_2:-7874797 Msa0053480:three_prime_UTR
CTAATATTGATTAATAGAAA+AGG 0.471967 1_2:+7874443 None:intergenic
AGTAACCAATCTCCAAATCA+TGG 0.476476 1_2:+7874560 None:intergenic
CGTGAAGAAATAGGAACTAC+TGG 0.478841 1_2:-7874992 Msa0053480:CDS
AAAAGGAAGAGAAATCTTCC+TGG 0.478919 1_2:-7876776 Msa0053480:CDS
TGCATTAAGTGGGGTCTACA+AGG 0.485099 1_2:+7875049 None:intergenic
TATTAGGAAACAAAGTTGTA+GGG 0.486072 1_2:+7875179 None:intergenic
CTGAAATTTCCACACTAAGC+AGG 0.487400 1_2:-7877318 Msa0053480:five_prime_UTR
AAAGCTCATTCCAAAATTTG+TGG 0.492046 1_2:-7875860 Msa0053480:CDS
AAAAGCAACATTATAAAGAA+TGG 0.495322 1_2:-7874754 Msa0053480:three_prime_UTR
AAACTCTCTTAGCAACAAAC+AGG 0.496554 1_2:-7876162 Msa0053480:CDS
GTAAGCAAAATCAAACTCCT+TGG 0.497139 1_2:-7874624 Msa0053480:three_prime_UTR
AGATTCTTACCTTGAGAAGA+GGG 0.498855 1_2:+7875808 None:intergenic
GGAAGCACGGTGAGAAGAAG+TGG 0.500086 1_2:-7875928 Msa0053480:CDS
GGTTGCTTTGAAAGCTGGTA+TGG 0.504025 1_2:+7877401 None:intergenic
GGTAAGAGAGAAGAATATTG+TGG 0.504225 1_2:+7877364 None:intergenic
CACGTGAGTTTGCATTAAGT+GGG 0.505578 1_2:+7875039 None:intergenic
ATCTAGAACCACAAGCCAAA+AGG 0.506626 1_2:-7876793 Msa0053480:CDS
AACTCACGTGCCTTCAGGAA+TGG 0.523050 1_2:-7875026 Msa0053480:CDS
AGAGATGATGAAAGGTTTGT+CGG 0.525812 1_2:-7876900 Msa0053480:exon
CATGACCCTTCAAGGGCACT+TGG 0.527782 1_2:-7875983 Msa0053480:CDS
TGGGTTGGGAGTAACCATAA+TGG 0.528528 1_2:+7875226 None:intergenic
TCCCAATTTCATCAAAGCCA+TGG 0.529104 1_2:-7875304 Msa0053480:CDS
GTTATGCAGTTCAGTCGGAT+TGG 0.535164 1_2:-7875883 Msa0053480:CDS
CGTGCCTTCAGGAATGGCTA+TGG 0.546913 1_2:-7875020 Msa0053480:CDS
TGCTTACCATGCAAACTCAA+AGG 0.555451 1_2:+7874640 None:intergenic
AGGTCACCAAGTGCCCTTGA+AGG 0.557241 1_2:+7875977 None:intergenic
TGAGTGATAGAGATGATGAA+AGG 0.561148 1_2:-7876908 Msa0053480:exon
TAAACGTTATGCAGTTCAGT+CGG 0.567043 1_2:-7875888 Msa0053480:CDS
AATTGTTTAGATCTTACGGC+AGG 0.567214 1_2:+7877031 None:intergenic
AAGATTCTTACCTTGAGAAG+AGG 0.572213 1_2:+7875807 None:intergenic
GATGGTCCTTTGAGTTTGCA+TGG 0.572532 1_2:-7874646 Msa0053480:three_prime_UTR
CAAGTGCCCTTGAAGGGTCA+TGG 0.580343 1_2:+7875984 None:intergenic
ATTTGTTTGTGAGTGTGTGA+AGG 0.584762 1_2:+7877342 None:intergenic
TTACTGCTGCTATGAGCATG+AGG 0.586599 1_2:-7874837 Msa0053480:three_prime_UTR
GGTCAATTTCCTGCTTAGTG+TGG 0.586633 1_2:+7877309 None:intergenic
GTGATAGTGGTTGAAAACCA+TGG 0.587939 1_2:+7875287 None:intergenic
TTTGTTGCTAAGAGAGTTTG+GGG 0.590009 1_2:+7876166 None:intergenic
AGAGAGGACATAATTTGCCA+TGG 0.596190 1_2:-7876081 Msa0053480:CDS
ATTTGTGAGATTTGTAACAA+AGG 0.598660 1_2:-7876136 Msa0053480:CDS
GGTCACCAAGTGCCCTTGAA+GGG 0.601914 1_2:+7875978 None:intergenic
AAGCTAGCACTTGTGCCTCA+GGG 0.605138 1_2:+7876194 None:intergenic
CTGTGATAAAACATCACAGA+AGG 0.605312 1_2:+7875372 None:intergenic
TAGATCTTACGGCAGGCTAG+AGG 0.610052 1_2:+7877038 None:intergenic
TTTGTTTGTGAGTGTGTGAA+GGG 0.612610 1_2:+7877343 None:intergenic
TGATGTGATGTATGGTAGTG+AGG 0.613764 1_2:-7874884 Msa0053480:three_prime_UTR
AATCTTCAGCTTCATAAGAG+AGG 0.614070 1_2:-7876097 Msa0053480:CDS
TGTTCACCATGACCCTTCAA+GGG 0.614167 1_2:-7875990 Msa0053480:CDS
GATGTGATGTATGGTAGTGA+GGG 0.620627 1_2:-7874883 Msa0053480:three_prime_UTR
AGCAACATTATAAAGAATGG+TGG 0.626398 1_2:-7874751 Msa0053480:three_prime_UTR
CAAAATCAAACTCCTTGGTG+AGG 0.632534 1_2:-7874619 Msa0053480:three_prime_UTR
AGAAATCTTCCTGGCCACCC+AGG 0.633086 1_2:-7876767 Msa0053480:intron
ACTGTGGAACCCTCTTCTCA+AGG 0.634375 1_2:-7875817 Msa0053480:intron
GAAGCCATAGCCATTCCTGA+AGG 0.639906 1_2:+7875016 None:intergenic
AAAGAGTATAAGTGTGACTG+TGG 0.643514 1_2:-7875833 Msa0053480:CDS
TACTGCTGCTATGAGCATGA+GGG 0.646189 1_2:-7874836 Msa0053480:three_prime_UTR
AAAGCAGTGGCAGACATGTG+AGG 0.650724 1_2:+7875121 None:intergenic
GATGATGAAAGGTTTGTCGG+TGG 0.652402 1_2:-7876897 Msa0053480:CDS
AAGGTGAATAGATCCCAAGA+TGG 0.655417 1_2:+7877214 None:intergenic
AATCAAGAATTTGGTAAACA+CGG 0.658414 1_2:+7877288 None:intergenic
ACGTGAGTTTGCATTAAGTG+GGG 0.666291 1_2:+7875040 None:intergenic
GGAGAGTGCATCAATTTCAG+CGG 0.685024 1_2:-7875350 Msa0053480:CDS
CCTGAATATCAGCCTCACCA+AGG 0.685282 1_2:+7874607 None:intergenic
GGGTCATGGTGAACACATGT+TGG 0.693614 1_2:+7875998 None:intergenic
ACTGCTGCTATGAGCATGAG+GGG 0.697079 1_2:-7874835 Msa0053480:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GAATCTTATTAATTTAAATT+TGG - chr1_2:7876169-7876188 Msa0053480:CDS 10.0%
!! CAAGAAAATAATATTACAAT+TGG + chr1_2:7875232-7875251 None:intergenic 15.0%
!! TATATACCAATTTATATTAC+TGG + chr1_2:7875271-7875290 None:intergenic 15.0%
!!! TAGCCTATTAATTTTTTTTT+AGG - chr1_2:7875656-7875675 Msa0053480:intron 15.0%
!!! AGCCTATTAATTTTTTTTTA+GGG - chr1_2:7875657-7875676 Msa0053480:intron 15.0%
!! TTCCCTAAAAAAAAATTAAT+AGG + chr1_2:7875662-7875681 None:intergenic 15.0%
!!! CTAATATTGATTAATAGAAA+AGG + chr1_2:7877520-7877539 None:intergenic 15.0%
!!! TATTATTTTCTTGTTCATGA+AGG - chr1_2:7875239-7875258 Msa0053480:CDS 20.0%
!! TATAAATTGGTATATACTGA+AGG - chr1_2:7875275-7875294 Msa0053480:CDS 20.0%
!!! GTTTTACAATTGAATATTTG+TGG - chr1_2:7875710-7875729 Msa0053480:intron 20.0%
!! ACATACAAATCAATTCAAAA+TGG - chr1_2:7876335-7876354 Msa0053480:intron 20.0%
!!! TTTGAGTTGAAAGAATTATT+AGG + chr1_2:7876800-7876819 None:intergenic 20.0%
!! AAAAGCAACATTATAAAGAA+TGG - chr1_2:7877206-7877225 Msa0053480:five_prime_UTR 20.0%
!!! AATTAATTTGAATCCTTCTT+AGG + chr1_2:7877432-7877451 None:intergenic 20.0%
! ATTGTGGATGAGAAATTAAA+GGG + chr1_2:7874583-7874602 None:intergenic 25.0%
! TATTGTGGATGAGAAATTAA+AGG + chr1_2:7874584-7874603 None:intergenic 25.0%
! AATCAAGAATTTGGTAAACA+CGG + chr1_2:7874675-7874694 None:intergenic 25.0%
! AACTAGCTAAATCAAGAATT+TGG + chr1_2:7874684-7874703 None:intergenic 25.0%
! AAGAAAAAGCTGAGAAATTA+AGG + chr1_2:7874768-7874787 None:intergenic 25.0%
! CAAGAATTGTTTAGATCTTA+CGG + chr1_2:7874936-7874955 None:intergenic 25.0%
! AGTAGTCCAGTAATATAAAT+TGG - chr1_2:7875262-7875281 Msa0053480:CDS 25.0%
! ACTGAAGGAGTTATATATAT+AGG - chr1_2:7875290-7875309 Msa0053480:CDS 25.0%
!! TTATATATATAGGAGGTGTA+GGG - chr1_2:7875300-7875319 Msa0053480:CDS 25.0%
!!! TGTTAGTAGTTAGTTTGTTA+GGG + chr1_2:7875357-7875376 None:intergenic 25.0%
! TTACCTATCAAAAAAAGACA+GGG - chr1_2:7875378-7875397 Msa0053480:CDS 25.0%
! AAAAAAAGACAGGGTTTAAT+TGG - chr1_2:7875387-7875406 Msa0053480:CDS 25.0%
! GGCTGAAAATATTGTTAATT+TGG - chr1_2:7875731-7875750 Msa0053480:intron 25.0%
! ATTTGTGAGATTTGTAACAA+AGG - chr1_2:7875824-7875843 Msa0053480:CDS 25.0%
! GATACAAACAAACTAAATCA+TGG - chr1_2:7876200-7876219 Msa0053480:intron 25.0%
!!! AGTTTATTTTTGATTGCAGA+AGG - chr1_2:7876543-7876562 Msa0053480:intron 25.0%
!!! GTTTATTTTTGATTGCAGAA+GGG - chr1_2:7876544-7876563 Msa0053480:intron 25.0%
!!! TGTTCTTTTTTTAGTGATAG+TGG + chr1_2:7876689-7876708 None:intergenic 25.0%
!!! GTTTTGATAATGGTTCAAAT+GGG + chr1_2:7876756-7876775 None:intergenic 25.0%
! TATTAGGAAACAAAGTTGTA+GGG + chr1_2:7876784-7876803 None:intergenic 25.0%
! TTATTAGGAAACAAAGTTGT+AGG + chr1_2:7876785-7876804 None:intergenic 25.0%
!! ATTGTTTGGCTTCTTAATTA+TGG - chr1_2:7876999-7877018 Msa0053480:five_prime_UTR 25.0%
!! TTGTTTGGCTTCTTAATTAT+GGG - chr1_2:7877000-7877019 Msa0053480:five_prime_UTR 25.0%
! GAGAGATAATAATAACTTTG+AGG - chr1_2:7877163-7877182 Msa0053480:five_prime_UTR 25.0%
!!! AATGTTGCTTTTACCAAAAT+GGG + chr1_2:7877198-7877217 None:intergenic 25.0%
!!! TAATGTTGCTTTTACCAAAA+TGG + chr1_2:7877199-7877218 None:intergenic 25.0%
!! TTCAATATATCTGGAATTGA+TGG - chr1_2:7877296-7877315 Msa0053480:five_prime_UTR 25.0%
!!! CTATACACTTGCTATTAATT+AGG - chr1_2:7877455-7877474 Msa0053480:five_prime_UTR 25.0%
GAGAGAAAGAAAAAGAAAAG+AGG - chr1_2:7874470-7874489 Msa0053480:three_prime_UTR 30.0%
! TCATGATAACAAGCCAATTT+TGG - chr1_2:7874512-7874531 Msa0053480:three_prime_UTR 30.0%
! ACTTTGAAAGAAATCCATCT+TGG - chr1_2:7874732-7874751 Msa0053480:three_prime_UTR 30.0%
! CTTTGAAAGAAATCCATCTT+GGG - chr1_2:7874733-7874752 Msa0053480:three_prime_UTR 30.0%
TTCTGAGTGTAAAAAAAGAG+AGG + chr1_2:7874814-7874833 None:intergenic 30.0%
! TAAACAATTCTTGCCTTTTC+CGG - chr1_2:7874943-7874962 Msa0053480:three_prime_UTR 30.0%
!!! AGATCAACTTCTTTTTTCAC+CGG + chr1_2:7874965-7874984 None:intergenic 30.0%
! AAAGTGTCTCTCAGATATAT+TGG - chr1_2:7874991-7875010 Msa0053480:CDS 30.0%
! TTGGTGTGATTTTATTACCT+GGG + chr1_2:7875213-7875232 None:intergenic 30.0%
! ATTGGTGTGATTTTATTACC+TGG + chr1_2:7875214-7875233 None:intergenic 30.0%
GAAGGAGTTATATATATAGG+AGG - chr1_2:7875293-7875312 Msa0053480:CDS 30.0%
! GTTATATATATAGGAGGTGT+AGG - chr1_2:7875299-7875318 Msa0053480:CDS 30.0%
!! GTGTTAGTAGTTAGTTTGTT+AGG + chr1_2:7875358-7875377 None:intergenic 30.0%
CTTACCTATCAAAAAAAGAC+AGG - chr1_2:7875377-7875396 Msa0053480:CDS 30.0%
!!! AAACCCTGTCTTTTTTTGAT+AGG + chr1_2:7875384-7875403 None:intergenic 30.0%
TTGTCATAACTCATATCTCT+TGG + chr1_2:7875428-7875447 None:intergenic 30.0%
CAATATATCACCTAAATCCA+TGG + chr1_2:7875451-7875470 None:intergenic 30.0%
TGGATTTAGGTGATATATTG+TGG - chr1_2:7875451-7875470 Msa0053480:intron 30.0%
!! TTTCTTTTCTTTAGCTTCCA+TGG + chr1_2:7875899-7875918 None:intergenic 30.0%
AAAGCTCATTCCAAAATTTG+TGG - chr1_2:7876100-7876119 Msa0053480:CDS 30.0%
TAAGACCAGAAATTCCATTA+TGG - chr1_2:7876720-7876739 Msa0053480:intron 30.0%
! AGTAACCATAATGGAATTTC+TGG + chr1_2:7876728-7876747 None:intergenic 30.0%
!!! GGTTTTGATAATGGTTCAAA+TGG + chr1_2:7876757-7876776 None:intergenic 30.0%
!!! TACTGGTTTTTCTCATTGTT+TGG - chr1_2:7876985-7877004 Msa0053480:five_prime_UTR 30.0%
AGCAACATTATAAAGAATGG+TGG - chr1_2:7877209-7877228 Msa0053480:five_prime_UTR 30.0%
!!! ACAAGAGATTTTTTGAGTCT+TGG - chr1_2:7877251-7877270 Msa0053480:five_prime_UTR 30.0%
! AGAGACTTGTTCAATATATC+TGG - chr1_2:7877287-7877306 Msa0053480:five_prime_UTR 30.0%
CCAAAACACAAAGCCAAAAT+TGG + chr1_2:7874528-7874547 None:intergenic 35.0%
!!! CCAATTTTGGCTTTGTGTTT+TGG - chr1_2:7874525-7874544 Msa0053480:three_prime_UTR 35.0%
GGTAAGAGAGAAGAATATTG+TGG + chr1_2:7874599-7874618 None:intergenic 35.0%
TTTGTTTGTGAGTGTGTGAA+GGG + chr1_2:7874620-7874639 None:intergenic 35.0%
ATTTGTTTGTGAGTGTGTGA+AGG + chr1_2:7874621-7874640 None:intergenic 35.0%
CTAGTTGCTATAGCTAGATT+TGG - chr1_2:7874698-7874717 Msa0053480:three_prime_UTR 35.0%
CTGCTTACTTGAACTTGAAA+AGG + chr1_2:7874791-7874810 None:intergenic 35.0%
GCTACTTGCACTAAGTATAT+CGG + chr1_2:7874903-7874922 None:intergenic 35.0%
AATTGTTTAGATCTTACGGC+AGG + chr1_2:7874932-7874951 None:intergenic 35.0%
!!! ACTTCTTTTTTCACCGGAAA+AGG + chr1_2:7874959-7874978 None:intergenic 35.0%
TGAGTGATAGAGATGATGAA+AGG - chr1_2:7875052-7875071 Msa0053480:CDS 35.0%
AGAGATGATGAAAGGTTTGT+CGG - chr1_2:7875060-7875079 Msa0053480:CDS 35.0%
! TGTTGAAGCTTTTCCATTCT+TGG + chr1_2:7875146-7875165 None:intergenic 35.0%
! AGGAAGATTTCTCTTCCTTT+TGG + chr1_2:7875185-7875204 None:intergenic 35.0%
AAAAGGAAGAGAAATCTTCC+TGG - chr1_2:7875184-7875203 Msa0053480:CDS 35.0%
!! TAGTTAGTTTGTTAGGGAAG+TGG + chr1_2:7875351-7875370 None:intergenic 35.0%
GATATGAGTTATGACAACCA+TGG - chr1_2:7875431-7875450 Msa0053480:intron 35.0%
GTTATGACAACCATGGATTT+AGG - chr1_2:7875438-7875457 Msa0053480:intron 35.0%
CAAAGAAAAGTAGTAGCCAA+GGG + chr1_2:7875599-7875618 None:intergenic 35.0%
ACAAAGAAAAGTAGTAGCCA+AGG + chr1_2:7875600-7875619 None:intergenic 35.0%
TTTGTTGCTAAGAGAGTTTG+GGG + chr1_2:7875797-7875816 None:intergenic 35.0%
! GTTTGTTGCTAAGAGAGTTT+GGG + chr1_2:7875798-7875817 None:intergenic 35.0%
! TGTTTGTTGCTAAGAGAGTT+TGG + chr1_2:7875799-7875818 None:intergenic 35.0%
AAACTCTCTTAGCAACAAAC+AGG - chr1_2:7875798-7875817 Msa0053480:intron 35.0%
AATCTTCAGCTTCATAAGAG+AGG - chr1_2:7875863-7875882 Msa0053480:CDS 35.0%
!!! GAATCAAGAAGCACTTTTTC+AGG - chr1_2:7876011-7876030 Msa0053480:intron 35.0%
TAAACGTTATGCAGTTCAGT+CGG - chr1_2:7876072-7876091 Msa0053480:CDS 35.0%
! CTCTTTAGTGCCACAAATTT+TGG + chr1_2:7876113-7876132 None:intergenic 35.0%
! AAAGAGTATAAGTGTGACTG+TGG - chr1_2:7876127-7876146 Msa0053480:CDS 35.0%
AGATTCTTACCTTGAGAAGA+GGG + chr1_2:7876155-7876174 None:intergenic 35.0%
AAGATTCTTACCTTGAGAAG+AGG + chr1_2:7876156-7876175 None:intergenic 35.0%
! CTCTCTCTCTTATCTCTTTT+TGG + chr1_2:7876254-7876273 None:intergenic 35.0%
! AAGAGAGAGAGTACGTAAAA+AGG - chr1_2:7876263-7876282 Msa0053480:intron 35.0%
CTGTGATAAAACATCACAGA+AGG + chr1_2:7876591-7876610 None:intergenic 35.0%
! CTTCTGTGATGTTTTATCAC+AGG - chr1_2:7876589-7876608 Msa0053480:intron 35.0%
!! ACCATGGCTTTGATGAAATT+GGG + chr1_2:7876660-7876679 None:intergenic 35.0%
!! AACCATGGCTTTGATGAAAT+TGG + chr1_2:7876661-7876680 None:intergenic 35.0%
! GATAATGGTTCAAATGGGTT+GGG + chr1_2:7876751-7876770 None:intergenic 35.0%
!! TGATAATGGTTCAAATGGGT+TGG + chr1_2:7876752-7876771 None:intergenic 35.0%
!! TAGGGTTAGGGTTTTGATAA+TGG + chr1_2:7876766-7876785 None:intergenic 35.0%
GAAACAAAGTTGTAGGGTTA+GGG + chr1_2:7876778-7876797 None:intergenic 35.0%
!! CTGCAAAAAGCATCACAAAT+AGG - chr1_2:7876863-7876882 Msa0053480:CDS 35.0%
! CTTTTGCATGATGTGATGTA+TGG - chr1_2:7877068-7877087 Msa0053480:five_prime_UTR 35.0%
! GAGGAACAATATTCCCATTT+TGG - chr1_2:7877182-7877201 Msa0053480:five_prime_UTR 35.0%
TCTTGTCATCTCATCATCAT+TGG + chr1_2:7877237-7877256 None:intergenic 35.0%
GTAAGCAAAATCAAACTCCT+TGG - chr1_2:7877336-7877355 Msa0053480:five_prime_UTR 35.0%
CTAATGCATACTCCATGATT+TGG - chr1_2:7877388-7877407 Msa0053480:five_prime_UTR 35.0%
! ATACTCCATGATTTGGAGAT+TGG - chr1_2:7877395-7877414 Msa0053480:five_prime_UTR 35.0%
AGTAACCAATCTCCAAATCA+TGG + chr1_2:7877403-7877422 None:intergenic 35.0%
!!! GGTTACTTTTTCTCCTAAGA+AGG - chr1_2:7877416-7877435 Msa0053480:five_prime_UTR 35.0%
!! TAAAGGGTTGCTTTGAAAGC+TGG + chr1_2:7874567-7874586 None:intergenic 40.0%
CTGCTTAGTGTGGAAATTTC+AGG + chr1_2:7874644-7874663 None:intergenic 40.0%
CTGAAATTTCCACACTAAGC+AGG - chr1_2:7874642-7874661 Msa0053480:three_prime_UTR 40.0%
AAGGTGAATAGATCCCAAGA+TGG + chr1_2:7874749-7874768 None:intergenic 40.0%
! ATCTAGAACCACAAGCCAAA+AGG - chr1_2:7875167-7875186 Msa0053480:CDS 40.0%
!!! TTTCTCTTCCTTTTGGCTTG+TGG + chr1_2:7875178-7875197 None:intergenic 40.0%
! GTGTGATTTTATTACCTGGG+TGG + chr1_2:7875210-7875229 None:intergenic 40.0%
TCTGATGATCGTGTTAGAGT+CGG + chr1_2:7875493-7875512 None:intergenic 40.0%
ACACTGATGCATAGTCACAT+AGG - chr1_2:7875556-7875575 Msa0053480:intron 40.0%
! AGAGAGGACATAATTTGCCA+TGG - chr1_2:7875879-7875898 Msa0053480:CDS 40.0%
AGTGCTTCTTGATTCCAGTT+AGG + chr1_2:7876006-7876025 None:intergenic 40.0%
!!! AAGCACTTTTTCAGGAAGCA+CGG - chr1_2:7876019-7876038 Msa0053480:intron 40.0%
TCCCAATTTCATCAAAGCCA+TGG - chr1_2:7876656-7876675 Msa0053480:intron 40.0%
!! GTGATAGTGGTTGAAAACCA+TGG + chr1_2:7876676-7876695 None:intergenic 40.0%
GGAAACAAAGTTGTAGGGTT+AGG + chr1_2:7876779-7876798 None:intergenic 40.0%
ACGTGAGTTTGCATTAAGTG+GGG + chr1_2:7876923-7876942 None:intergenic 40.0%
CACGTGAGTTTGCATTAAGT+GGG + chr1_2:7876924-7876943 None:intergenic 40.0%
ATGGCTTCACGTGAAGAAAT+AGG - chr1_2:7876959-7876978 Msa0053480:five_prime_UTR 40.0%
CGTGAAGAAATAGGAACTAC+TGG - chr1_2:7876968-7876987 Msa0053480:five_prime_UTR 40.0%
! TGATGTGATGTATGGTAGTG+AGG - chr1_2:7877076-7877095 Msa0053480:five_prime_UTR 40.0%
! GATGTGATGTATGGTAGTGA+GGG - chr1_2:7877077-7877096 Msa0053480:five_prime_UTR 40.0%
TGCTTACCATGCAAACTCAA+AGG + chr1_2:7877323-7877342 None:intergenic 40.0%
CAAAATCAAACTCCTTGGTG+AGG - chr1_2:7877341-7877360 Msa0053480:five_prime_UTR 40.0%
!! GGTTGCTTTGAAAGCTGGTA+TGG + chr1_2:7874562-7874581 None:intergenic 45.0%
GGTCAATTTCCTGCTTAGTG+TGG + chr1_2:7874654-7874673 None:intergenic 45.0%
GATGATGAAAGGTTTGTCGG+TGG - chr1_2:7875063-7875082 Msa0053480:CDS 45.0%
GCTTCTTCAGCAACCAAGAA+TGG - chr1_2:7875130-7875149 Msa0053480:CDS 45.0%
! ATTTTATTACCTGGGTGGCC+AGG + chr1_2:7875205-7875224 None:intergenic 45.0%
!!! TGGTTTTGTTTCAGACCCTG+AGG - chr1_2:7875751-7875770 Msa0053480:intron 45.0%
TGTTCACCATGACCCTTCAA+GGG - chr1_2:7875970-7875989 Msa0053480:CDS 45.0%
GTTATGCAGTTCAGTCGGAT+TGG - chr1_2:7876077-7876096 Msa0053480:CDS 45.0%
GTGTTTGACGTTTACTCTGC+AGG - chr1_2:7876392-7876411 Msa0053480:intron 45.0%
! GGAGAGTGCATCAATTTCAG+CGG - chr1_2:7876610-7876629 Msa0053480:intron 45.0%
GGGAGTGAGAAGAGAATAGA+GGG + chr1_2:7876640-7876659 None:intergenic 45.0%
TGGGAGTGAGAAGAGAATAG+AGG + chr1_2:7876641-7876660 None:intergenic 45.0%
! TGGGTTGGGAGTAACCATAA+TGG + chr1_2:7876737-7876756 None:intergenic 45.0%
!! TGCTTTTTGCAGCAAAGCAG+TGG + chr1_2:7876855-7876874 None:intergenic 45.0%
TGCATTAAGTGGGGTCTACA+AGG + chr1_2:7876914-7876933 None:intergenic 45.0%
GCACGTGAGTTTGCATTAAG+TGG + chr1_2:7876925-7876944 None:intergenic 45.0%
TTACTGCTGCTATGAGCATG+AGG - chr1_2:7877123-7877142 Msa0053480:five_prime_UTR 45.0%
TACTGCTGCTATGAGCATGA+GGG - chr1_2:7877124-7877143 Msa0053480:five_prime_UTR 45.0%
! GATGGTCCTTTGAGTTTGCA+TGG - chr1_2:7877314-7877333 Msa0053480:five_prime_UTR 45.0%
!! ATATAACATTAATATATAAT+AGG + chr1_2:7875689-7875708 None:intergenic 5.0%
TAGATCTTACGGCAGGCTAG+AGG + chr1_2:7874925-7874944 None:intergenic 50.0%
GTCACATAGGTAGCACCATG+AGG - chr1_2:7875569-7875588 Msa0053480:intron 50.0%
AAGCTAGCACTTGTGCCTCA+GGG + chr1_2:7875769-7875788 None:intergenic 50.0%
AAAGCTAGCACTTGTGCCTC+AGG + chr1_2:7875770-7875789 None:intergenic 50.0%
!! TGGTGAACACATGTTGGCTC+TGG + chr1_2:7875959-7875978 None:intergenic 50.0%
GGGTCATGGTGAACACATGT+TGG + chr1_2:7875965-7875984 None:intergenic 50.0%
GTGTTCACCATGACCCTTCA+AGG - chr1_2:7875969-7875988 Msa0053480:CDS 50.0%
ACTGTGGAACCCTCTTCTCA+AGG - chr1_2:7876143-7876162 Msa0053480:CDS 50.0%
AAAGCAGTGGCAGACATGTG+AGG + chr1_2:7876842-7876861 None:intergenic 50.0%
ATGCAAACTCACGTGCCTTC+AGG - chr1_2:7876929-7876948 Msa0053480:five_prime_UTR 50.0%
AACTCACGTGCCTTCAGGAA+TGG - chr1_2:7876934-7876953 Msa0053480:five_prime_UTR 50.0%
GAAGCCATAGCCATTCCTGA+AGG + chr1_2:7876947-7876966 None:intergenic 50.0%
ACTGCTGCTATGAGCATGAG+GGG - chr1_2:7877125-7877144 Msa0053480:five_prime_UTR 50.0%
CCTGAATATCAGCCTCACCA+AGG + chr1_2:7877356-7877375 None:intergenic 50.0%
CCTTGGTGAGGCTGATATTC+AGG - chr1_2:7877353-7877372 Msa0053480:five_prime_UTR 50.0%
AGAAATCTTCCTGGCCACCC+AGG - chr1_2:7875193-7875212 Msa0053480:CDS 55.0%
CAAGTGCCCTTGAAGGGTCA+TGG + chr1_2:7875979-7875998 None:intergenic 55.0%
!! CATGACCCTTCAAGGGCACT+TGG - chr1_2:7875977-7875996 Msa0053480:CDS 55.0%
GGTCACCAAGTGCCCTTGAA+GGG + chr1_2:7875985-7876004 None:intergenic 55.0%
AGGTCACCAAGTGCCCTTGA+AGG + chr1_2:7875986-7876005 None:intergenic 55.0%
! AGGGCACTTGGTGACCTAAC+TGG - chr1_2:7875989-7876008 Msa0053480:CDS 55.0%
! GGAAGCACGGTGAGAAGAAG+TGG - chr1_2:7876032-7876051 Msa0053480:intron 55.0%
CGTGCCTTCAGGAATGGCTA+TGG - chr1_2:7876940-7876959 Msa0053480:five_prime_UTR 55.0%
! AGCACCATGAGGTGCTCCCT+TGG - chr1_2:7875580-7875599 Msa0053480:intron 60.0%
!! GTAGCCAAGGGAGCACCTCA+TGG + chr1_2:7875587-7875606 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr1_2 gene 7874426 7877556 7874426 ID=Msa0053480;Name=Msa0053480
chr1_2 mRNA 7874426 7877556 7874426 ID=Msa0053480-mRNA-1;Parent=Msa0053480;Name=Msa0053480-mRNA-1;_AED=0.01;_eAED=0.01;_QI=638|0.66|0.5|1|0.66|0.5|4|541|328
chr1_2 exon 7874426 7875420 7874426 ID=Msa0053480-mRNA-1:exon:2734;Parent=Msa0053480-mRNA-1
chr1_2 exon 7875818 7876020 7875818 ID=Msa0053480-mRNA-1:exon:2733;Parent=Msa0053480-mRNA-1
chr1_2 exon 7876039 7876217 7876039 ID=Msa0053480-mRNA-1:exon:2732;Parent=Msa0053480-mRNA-1
chr1_2 exon 7876768 7877556 7876768 ID=Msa0053480-mRNA-1:exon:2731;Parent=Msa0053480-mRNA-1
chr1_2 five_prime_UTR 7876919 7877556 7876919 ID=Msa0053480-mRNA-1:five_prime_utr;Parent=Msa0053480-mRNA-1
chr1_2 CDS 7876768 7876918 7876768 ID=Msa0053480-mRNA-1:cds;Parent=Msa0053480-mRNA-1
chr1_2 CDS 7876039 7876217 7876039 ID=Msa0053480-mRNA-1:cds;Parent=Msa0053480-mRNA-1
chr1_2 CDS 7875818 7876020 7875818 ID=Msa0053480-mRNA-1:cds;Parent=Msa0053480-mRNA-1
chr1_2 CDS 7874967 7875420 7874967 ID=Msa0053480-mRNA-1:cds;Parent=Msa0053480-mRNA-1
chr1_2 three_prime_UTR 7874426 7874966 7874426 ID=Msa0053480-mRNA-1:three_prime_utr;Parent=Msa0053480-mRNA-1
Gene Sequence

>Msa0053480

ATGATGAAAGGTTTGTCGGTGGATGAAAATATGTCAAATTTGACATCTGCTTCAAGTGAAATAAGTGCTTCTTCAGCAACCAAGAATGGAAAAGCTTCAACAAATCTAGAACCACAAGCCAAAAGGAAGAGAAATCTTCCTGGCCACCCAGACCCTGAGGCACAAGTGCTAGCTTTGAGTCCCCAAACTCTCTTAGCAACAAACAGGTTCATTTGTGAGATTTGTAACAAAGGTTTTCAAAGAGATCAAAATCTTCAGCTTCATAAGAGAGGACATAATTTGCCATGGAAGCTAAAGAAAAGAAACGTCAATGAAATCATAAGAAAGAAACCAACATGTGTTCACCATGACCCTTCAAGGGCACTTGGTGACCTAACTGGAATCAAGAAGCACTTTTTCAGGAAGCACGGTGAGAAGAAGTGGAAGTGTGAGAAATGTTCTAAACGTTATGCAGTTCAGTCGGATTGGAAAGCTCATTCCAAAATTTGTGGCACTAAAGAGTATAAGTGTGACTGTGGAACCCTCTTCTCAAGAAGGGACAGTTTTATCACTCACAGAGCCTTCTGTGATGTTTTATCACAGGAGAGTGCATCAATTTCAGCGGTGAACCCTCTATTCTCTTCTCACTCCCAATTTCATCAAAGCCATGGTTTTCAACCACTATCACTAAAAAAAGAACAAGACTTCAATTTAAGACCAGAAATTCCATTATGGTTACTCCCAACCCATTTGAACCATTATCAAAACCCTAACCCTACAACTTTGTTTCCTAATAATTCTTTCAACTCAAACAATATGACTACTGCTTCTCCTCACATGTCTGCCACTGCTTTGCTGCAAAAAGCATCACAAATAGGTGTAACGACAGTGAGTAAAACAGAACCTTGTAGACCCCACTTAATGCAAACTCACGTGCCTTCAGGAATGGCTATGGCTTCACGTGAAGAAATAGGAACTACTGGTTTTTCTCATTGTTTGGCTTCTTAA

Protein sequence

>Msa0053480

MMKGLSVDENMSNLTSASSEISASSATKNGKASTNLEPQAKRKRNLPGHPDPEAQVLALSPQTLLATNRFICEICNKGFQRDQNLQLHKRGHNLPWKLKKRNVNEIIRKKPTCVHHDPSRALGDLTGIKKHFFRKHGEKKWKCEKCSKRYAVQSDWKAHSKICGTKEYKCDCGTLFSRRDSFITHRAFCDVLSQESASISAVNPLFSSHSQFHQSHGFQPLSLKKEQDFNLRPEIPLWLLPTHLNHYQNPNPTTLFPNNSFNSNNMTTASPHMSATALLQKASQIGVTTVSKTEPCRPHLMQTHVPSGMAMASREEIGTTGFSHCLAS*