AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0509020

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0509020 MtrunA17_Chr3g0113631 94.582 1089 51 2 1 1089 1 1081 0.0 1989
Msa0509020 MtrunA17_Chr3g0105051 38.354 1142 589 31 1 1089 1 1080 0.0 634
Msa0509020 MtrunA17_Chr5g0430201 39.289 1125 577 32 1 1073 1 1071 0.0 622
Msa0509020 MtrunA17_Chr7g0235711 94.170 223 13 0 614 836 11 233 6.88e-146 436
Msa0509020 MtrunA17_Chr4g0073021 28.133 1141 601 42 1 1061 1 1002 1.00e-95 328
Msa0509020 MtrunA17_Chr7g0235721 60.465 258 33 4 288 544 76 265 4.42e-81 267
Msa0509020 MtrunA17_Chr7g0235721 85.075 67 10 0 25 91 9 75 5.48e-18 86.3
Msa0509020 MtrunA17_Chr2g0298801 32.944 428 214 14 1 384 1 399 1.63e-39 159
Msa0509020 MtrunA17_Chr1g0197121 28.113 530 302 20 10 508 11 492 1.26e-36 149
Msa0509020 MtrunA17_Chr1g0177421 30.361 415 222 16 1 383 1 380 9.23e-36 146
Msa0509020 MtrunA17_Chr1g0177421 29.825 171 106 3 694 850 561 731 3.86e-13 73.9
Msa0509020 MtrunA17_Chr4g0071701 42.012 169 84 4 9 174 9 166 1.24e-24 111
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0509020 AT2G29970.1 38.104 1097 542 35 1 1075 1 982 0.0 602
Msa0509020 AT1G07200.2 36.014 1119 539 33 1 1086 1 975 0.0 573
Msa0509020 AT2G40130.1 48.218 477 203 13 1 465 1 445 7.26e-123 399
Msa0509020 AT2G40130.1 35.076 459 231 11 623 1071 486 887 8.73e-70 252
Msa0509020 AT2G40130.2 48.218 477 203 13 1 465 1 445 8.38e-123 399
Msa0509020 AT2G40130.2 35.076 459 231 11 623 1071 489 890 8.02e-70 252
Msa0509020 AT1G07200.1 32.075 477 239 15 620 1086 17 418 4.61e-54 195
Msa0509020 AT5G57710.1 34.531 501 244 20 1 464 1 454 7.17e-52 199
Msa0509020 AT5G57710.1 26.984 378 231 8 696 1061 610 954 5.69e-35 145
Msa0509020 AT3G52490.1 31.527 406 201 17 7 382 7 365 3.11e-38 154
Msa0509020 AT3G52490.1 27.684 177 107 4 691 850 570 742 1.44e-13 75.9
Msa0509020 AT4G30350.1 34.286 420 209 15 1 384 1 389 3.28e-38 155
Msa0509020 AT4G30350.1 26.667 375 230 12 696 1070 571 900 1.02e-32 137
Msa0509020 AT4G29920.2 42.935 184 88 4 1 177 1 174 2.47e-27 120
Msa0509020 AT4G29920.1 43.094 181 86 4 1 174 1 171 2.68e-27 120
Msa0509020 AT5G57130.1 28.690 481 233 21 1 384 1 468 8.77e-27 119

Find 247 sgRNAs with CRISPR-Local

Find 334 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGAAAGTTACTTGAAATTTC+TGG 0.131871 3_4:+57287839 Msa0509020:CDS
TTGTCTGCATCAAACTATTT+TGG 0.192047 3_4:-57290101 None:intergenic
TTATACCTCAACAATTTATT+TGG 0.195726 3_4:-57291107 None:intergenic
TGATTGTTGTCTTCTCTATT+TGG 0.200062 3_4:+57290821 Msa0509020:three_prime_UTR
TAGCCGTATCTGCGAGTAAA+TGG 0.216279 3_4:-57290317 None:intergenic
GAAGGTGTTGTTGAGGAATT+AGG 0.220172 3_4:+57287759 Msa0509020:CDS
ACTGCATTCATTCATTTCTT+TGG 0.229474 3_4:-57289866 None:intergenic
TACTCGCAGATACGGCTAAA+AGG 0.266878 3_4:+57290322 Msa0509020:CDS
CCGGGTGTTATAGTGAGTTT+TGG 0.278369 3_4:+57287696 Msa0509020:CDS
AATAACTTCAACAAAATTCT+TGG 0.287837 3_4:+57290555 Msa0509020:CDS
AAGCTTGAAGTAAATCGATT+AGG 0.295089 3_4:-57289505 None:intergenic
TTTCCTCATGATAATCAATA+TGG 0.295994 3_4:+57288661 Msa0509020:CDS
ACCGGTTTCGAATTCGCTTA+TGG 0.305716 3_4:+57287059 Msa0509020:CDS
AGCTTGAAGTAAATCGATTA+GGG 0.309570 3_4:-57289504 None:intergenic
GCTGGGTTTGGATTTGGATT+AGG 0.309595 3_4:+57287375 Msa0509020:CDS
TGGAACATATCAGTTAGATT+TGG 0.312456 3_4:-57289283 None:intergenic
ATGAGAATTTCCGGAGAATT+GGG 0.315277 3_4:+57287442 Msa0509020:CDS
TTTAAAGCTTGGATTGCTTC+TGG 0.320278 3_4:-57286805 None:intergenic
GATGAGAATTTCCGGAGAAT+TGG 0.321061 3_4:+57287441 Msa0509020:CDS
AGGATGTAGATGAGAATTTC+CGG 0.325191 3_4:+57287433 Msa0509020:CDS
GTTTGGATGAAGAGATTATC+AGG 0.325217 3_4:+57289530 Msa0509020:CDS
ATTTACTTCAAGCTTAAGTT+TGG 0.327831 3_4:+57289513 Msa0509020:CDS
TTCCTTCTGTGGAGAAAGAT+TGG 0.334000 3_4:+57287868 Msa0509020:CDS
TGGTTGAAGACTAAAGAATT+TGG 0.339281 3_4:+57288772 Msa0509020:CDS
GAAGCCTTAACAGAAGTAAT+AGG 0.340459 3_4:-57287906 None:intergenic
AATCTTGCAACCAAAGGTTT+TGG 0.345746 3_4:-57290449 None:intergenic
AGATTCATTATGATAAGTTT+TGG 0.346758 3_4:+57287793 Msa0509020:CDS
CACCAAACCACCATCGTCTT+TGG 0.354002 3_4:-57288975 None:intergenic
GAAAGTTACTTGAAATTTCT+GGG 0.360353 3_4:+57287840 Msa0509020:CDS
GTTGCAAGATTTGTATAATC+AGG 0.362930 3_4:+57290461 Msa0509020:CDS
TTCTGTTCATTCTCATCAGC+TGG 0.374068 3_4:-57290384 None:intergenic
AGCGGAGGAGTGTGTGGGAC+CGG 0.387445 3_4:+57287677 Msa0509020:CDS
CCCGGCGTGGCTGCTCCGGC+AGG 0.388387 3_4:-57287350 None:intergenic
AAGGTGTTGTTGAGGAATTA+GGG 0.389563 3_4:+57287760 Msa0509020:CDS
AGGAAAGAATATTGAGTGTA+AGG 0.390011 3_4:+57290145 Msa0509020:CDS
TCTTCCTATTACTTCTGTTA+AGG 0.396693 3_4:+57287902 Msa0509020:CDS
TTGGTGGATATTAGTGAATC+TGG 0.397983 3_4:+57288992 Msa0509020:CDS
TAGACATGTTGCATGATCTT+AGG 0.399007 3_4:-57289333 None:intergenic
ATAAACAAACGAAAATTGAT+TGG 0.399291 3_4:+57290273 Msa0509020:CDS
CATTGTCTTGCTGATGATAC+TGG 0.406130 3_4:-57286775 None:intergenic
TAAAGAAGGAAAAGAATTGC+TGG 0.406283 3_4:-57289233 None:intergenic
TTCTTTATTCTTGGCAAAGC+AGG 0.407178 3_4:+57289249 Msa0509020:CDS
TGATGATAGAGTGTTGAAAT+TGG 0.408070 3_4:+57290527 Msa0509020:CDS
GATTTGAGAGGTCCGCTAAA+TGG 0.409385 3_4:+57288625 Msa0509020:CDS
AATCTCAGAGCTTCGAAAAC+CGG 0.410413 3_4:-57287262 None:intergenic
AATCGATTAGGGATTTCCTT+TGG 0.411593 3_4:-57289493 None:intergenic
GCGAAAACTCTACTAACAAC+CGG 0.412020 3_4:-57287234 None:intergenic
TATTCTTTCCTCAGAATAGT+TGG 0.412079 3_4:-57290133 None:intergenic
GGTCCGCTAAATGGTTCATT+TGG 0.414541 3_4:+57288634 Msa0509020:CDS
GGGTTGCGTGTGATTTGTAT+TGG 0.415204 3_4:+57287591 Msa0509020:CDS
TAAAGTTGAGTTGCAGCATT+TGG 0.415715 3_4:+57287191 Msa0509020:CDS
CAAGATAAAAGTTGAACATA+TGG 0.418254 3_4:+57290179 Msa0509020:CDS
GTGATACGGAGGTGGAGAAC+TGG 0.420942 3_4:+57290649 Msa0509020:CDS
TTGATATTAATGATGGAAGT+AGG 0.423325 3_4:-57286687 None:intergenic
TGGTACGCCGCGTAATAACT+TGG 0.424168 3_4:+57289012 Msa0509020:CDS
TGATAGAAATGAAAGTTATC+AGG 0.424698 3_4:-57287120 None:intergenic
CCTGCCGGAGCAGCCACGCC+GGG 0.425991 3_4:+57287350 Msa0509020:CDS
AGATTCTTGTTCGGAGTAAA+GGG 0.426301 3_4:+57287466 Msa0509020:CDS
GGTTGCGTGTGATTTGTATT+GGG 0.426999 3_4:+57287592 Msa0509020:CDS
GACCAAAGACGATGGTGGTT+TGG 0.428172 3_4:+57288973 Msa0509020:intron
TTGTTTATGAAATTTAGATT+AGG 0.428862 3_4:-57290258 None:intergenic
TGTTAGCTACACCGATGCTT+TGG 0.432897 3_4:-57290218 None:intergenic
AGCACTCGATCTTTGTCTCT+CGG 0.433782 3_4:+57286981 Msa0509020:CDS
TCCATTGTATATTGAACTGC+AGG 0.435701 3_4:-57289466 None:intergenic
CAACTGAGAACCAAAACCTT+TGG 0.435780 3_4:+57290439 Msa0509020:CDS
ATAACTTCAACAAAATTCTT+GGG 0.438011 3_4:+57290556 Msa0509020:CDS
ATTGGTCGATGACTTCGGTT+TGG 0.439047 3_4:-57290599 None:intergenic
TCCTTCTGTGGAGAAAGATT+GGG 0.439992 3_4:+57287869 Msa0509020:CDS
AAATGTGAACATGAAGTTCT+TGG 0.443256 3_4:+57288688 Msa0509020:CDS
CTACTGCGTCGTTTAAAGCT+TGG 0.445744 3_4:-57286816 None:intergenic
TGCCGGAGCAGCCACGCCGG+GGG 0.446913 3_4:+57287352 Msa0509020:CDS
CGTATGCAGCTGCAAGCAAT+TGG 0.448193 3_4:-57290617 None:intergenic
AACACTTGTCCTACTGTTGT+GGG 0.450722 3_4:+57289076 Msa0509020:CDS
TCAAGGGAATCAAAATCATA+TGG 0.457326 3_4:-57290507 None:intergenic
GAATTCGCTGATGCAGAACT+TGG 0.458181 3_4:-57289045 None:intergenic
AAGTTAGACGGGTATGGATC+AGG 0.465175 3_4:-57288742 None:intergenic
GAGATTCTTGTTCGGAGTAA+AGG 0.465411 3_4:+57287465 Msa0509020:CDS
GAACAGAAACAAACAGATGA+TGG 0.468165 3_4:+57290399 Msa0509020:CDS
CTGAATTACTGTATGGAAGC+CGG 0.471612 3_4:+57289815 Msa0509020:CDS
TCTCTAGCTGAATTACTGTA+TGG 0.471880 3_4:+57289808 Msa0509020:CDS
AATAATCAACTGTGTGGAAG+TGG 0.478256 3_4:-57286562 None:intergenic
AGATTAAGCTTGCAATTCTC+CGG 0.479607 3_4:+57287280 Msa0509020:CDS
ATTATTAAAACAATAGTTTG+TGG 0.482556 3_4:+57289685 Msa0509020:CDS
GACATCGTTTGAACGCCAAC+AGG 0.484414 3_4:-57289199 None:intergenic
TTCCCATTTACTCGCAGATA+CGG 0.488156 3_4:+57290314 Msa0509020:CDS
AGTTAAGCAGGATGAAGATT+GGG 0.488340 3_4:-57289563 None:intergenic
GTAACCACGGATCTCGGCTT+AGG 0.488783 3_4:+57289406 Msa0509020:CDS
TCTATTGTGAACGATGATAG+TGG 0.489016 3_4:+57287729 Msa0509020:CDS
GGAAGAGATGCGGAAGTGGC+CGG 0.489057 3_4:-57287299 None:intergenic
GATGGCAAGATGAAGCCATA+AGG 0.489339 3_4:+57289659 Msa0509020:CDS
CTTGCTGATGATACTGGTGT+TGG 0.489518 3_4:-57286769 None:intergenic
GCCATAAGCGAATTCGAAAC+CGG 0.490442 3_4:-57287060 None:intergenic
ATTTCAACACTCTATCATCA+AGG 0.490477 3_4:-57290524 None:intergenic
GACTTCGGTTTGGATTTGTA+AGG 0.491765 3_4:-57290589 None:intergenic
CGATTAGGGATTTCCTTTGG+AGG 0.492732 3_4:-57289490 None:intergenic
ATTTAGCGGACCTCTCAAAT+CGG 0.494117 3_4:-57288623 None:intergenic
ACTCGCAGATACGGCTAAAA+GGG 0.494908 3_4:+57290323 Msa0509020:CDS
CATTGAAAATGTTGATAAAG+CGG 0.495371 3_4:+57289963 Msa0509020:CDS
AGCCGTATCTGCGAGTAAAT+GGG 0.496780 3_4:-57290316 None:intergenic
ACTCAATCTAAAACTATCCT+TGG 0.497044 3_4:-57290789 None:intergenic
GTAGGACAAGTGTTTGCCTT+GGG 0.498588 3_4:-57289067 None:intergenic
ACCATTGAGGTAAGTTAGAC+GGG 0.498702 3_4:-57288753 None:intergenic
TCTGGGTGGATTTCCTTCTG+TGG 0.499664 3_4:+57287857 Msa0509020:CDS
TCTCTTCCGTCGTGGTCCAC+CGG 0.500377 3_4:+57287314 Msa0509020:CDS
AGGTTTATAAATTAGAAAAG+TGG 0.501488 3_4:-57286662 None:intergenic
CAATTTATTGCTGGTAGGAA+AGG 0.502155 3_4:-57289437 None:intergenic
CTCTTTCGAAGGCGGTAAGA+TGG 0.502545 3_4:+57289641 Msa0509020:CDS
GATTCATTTGTACCACTTGG+TGG 0.502803 3_4:+57288583 Msa0509020:CDS
TTGTCTCAAGCCATCAAGAC+AGG 0.505339 3_4:+57290006 Msa0509020:CDS
CATATCAGAGACCAAGGTCC+AGG 0.505539 3_4:+57287934 Msa0509020:CDS
GAAGATTCAAATCTAAAAGC+CGG 0.505636 3_4:-57290362 None:intergenic
TGAGGTAAGTTAGACGGGTA+TGG 0.506595 3_4:-57288748 None:intergenic
GGAAAGAATATTGAGTGTAA+GGG 0.506915 3_4:+57290146 Msa0509020:CDS
GATGATAGTGGATTTGTTGA+AGG 0.507225 3_4:+57287741 Msa0509020:CDS
ATATTGAGTGTAAGGGGCAG+AGG 0.508668 3_4:+57290153 Msa0509020:CDS
AAGTTAAGCAGGATGAAGAT+TGG 0.509048 3_4:-57289564 None:intergenic
GCAGTGGAGAAGCGGAGAGA+AGG 0.509881 3_4:+57287546 Msa0509020:CDS
ATAATAGTCAAAAGTTAAGC+AGG 0.510086 3_4:-57289575 None:intergenic
TGAATTACTGTATGGAAGCC+GGG 0.510674 3_4:+57289816 Msa0509020:CDS
ACCTGCCGGAGCAGCCACGC+CGG 0.510681 3_4:+57287349 Msa0509020:CDS
CAATCTAAAACTATCCTTGG+TGG 0.511122 3_4:-57290786 None:intergenic
GGCGGCGATTAAACGATCTC+AGG 0.513617 3_4:+57287080 Msa0509020:CDS
CGACGGAAGAGATGCGGAAG+TGG 0.514717 3_4:-57287303 None:intergenic
AATGCAAAAGATCTTGAGTC+AGG 0.517636 3_4:+57289307 Msa0509020:CDS
GAGAAGCTTTACCGAGGCAG+TGG 0.518722 3_4:+57287530 Msa0509020:CDS
CAAGAATCTCCCCAATTCTC+CGG 0.518805 3_4:-57287452 None:intergenic
TCTTTAGTCTTCAACCATTG+AGG 0.520237 3_4:-57288766 None:intergenic
GAAACGTTGTTATGCGAAGA+AGG 0.521878 3_4:-57287021 None:intergenic
GCCGGAGCAGCCACGCCGGG+GGG 0.523102 3_4:+57287353 Msa0509020:CDS
TGCTTTGCCAAGAATAAAGA+AGG 0.523195 3_4:-57289247 None:intergenic
AACCATTGAGGTAAGTTAGA+CGG 0.523839 3_4:-57288754 None:intergenic
GAATTGGGGAGATTCTTGTT+CGG 0.523960 3_4:+57287457 Msa0509020:CDS
AACGATCTCAGGCGAATCAA+CGG 0.525143 3_4:+57287091 Msa0509020:CDS
TCACGGAGAATTGAAGAAGA+TGG 0.525588 3_4:-57286907 None:intergenic
CTGCCGGAGCAGCCACGCCG+GGG 0.528037 3_4:+57287351 Msa0509020:CDS
GAAGTGGAGTACTAGTAGTA+AGG 0.529384 3_4:-57286546 None:intergenic
ACTTCAGTAACCACGGATCT+CGG 0.530831 3_4:+57289400 Msa0509020:CDS
ATGGATTCATTTGTACCACT+TGG 0.532406 3_4:+57288580 Msa0509020:CDS
AAGCAATTGGTCGATGACTT+CGG 0.532613 3_4:-57290604 None:intergenic
TTCCTCTGATCATGAACCAC+CGG 0.533257 3_4:+57287041 Msa0509020:CDS
AAACACTTGTCCTACTGTTG+TGG 0.533314 3_4:+57289075 Msa0509020:CDS
CCCCACGCTGATTTAACCCA+TGG 0.534140 3_4:-57289729 None:intergenic
TGTACACTTGAAGCTTGCTC+TGG 0.535033 3_4:-57290759 None:intergenic
TCTCCGCTTCTCCACTGCCT+CGG 0.535312 3_4:-57287541 None:intergenic
TCCCAATCTTTCTCCACAGA+AGG 0.536779 3_4:-57287870 None:intergenic
ATGGCAAGATGAAGCCATAA+GGG 0.538048 3_4:+57289660 Msa0509020:CDS
GAAAGAATATTGAGTGTAAG+GGG 0.538947 3_4:+57290147 Msa0509020:CDS
TATACAAATCTTGCAACCAA+AGG 0.539912 3_4:-57290455 None:intergenic
TTGAGATTGATGTATTCTCT+AGG 0.542305 3_4:-57289166 None:intergenic
GCGGAGGAGTGTGTGGGACC+GGG 0.543340 3_4:+57287678 Msa0509020:CDS
CAAAGACGATGGTGGTTTGG+TGG 0.544288 3_4:+57288976 Msa0509020:CDS
GCGTGTGATTTGTATTGGGA+AGG 0.545422 3_4:+57287596 Msa0509020:CDS
ACCCGTCTAACTTACCTCAA+TGG 0.547191 3_4:+57288752 Msa0509020:CDS
AGTAGGACAAGTGTTTGCCT+TGG 0.548623 3_4:-57289068 None:intergenic
ACGTTTAATTTAAATATGCA+AGG 0.550421 3_4:-57290973 None:intergenic
CTCAACTCTCATGCACCTGT+TGG 0.550793 3_4:+57289184 Msa0509020:CDS
TTGCACTCTGCAATTTGAAG+AGG 0.551368 3_4:-57286600 None:intergenic
TAAATCAGCGTGGGGACAAG+TGG 0.552622 3_4:+57289737 Msa0509020:CDS
TCCCACACACTCCTCCGCTA+TGG 0.554008 3_4:-57287673 None:intergenic
TTTGTCTGTTCTTGATGACC+CGG 0.555553 3_4:+57287215 Msa0509020:CDS
TTGGATTTGTAAGGCACACT+CGG 0.557236 3_4:-57290580 None:intergenic
TGCCATAGCGGAGGAGTGTG+TGG 0.559738 3_4:+57287671 Msa0509020:CDS
CGCAACCCGGCAAGTTCCAA+AGG 0.560162 3_4:-57287576 None:intergenic
ATTGGGAAGGAGTTAGAGAG+TGG 0.560270 3_4:+57287609 Msa0509020:CDS
GGGCACATACAACATCAAAC+CGG 0.565540 3_4:+57290343 Msa0509020:CDS
TGATACGGAGGTGGAGAACT+GGG 0.566296 3_4:+57290650 Msa0509020:CDS
TCAATGAAAACCACAGACAA+TGG 0.567044 3_4:-57289946 None:intergenic
ATTTGTTGAAGGTGTTGTTG+AGG 0.567097 3_4:+57287752 Msa0509020:CDS
GTCAACCAAATAAATTGTTG+AGG 0.567098 3_4:+57291102 Msa0509020:three_prime_UTR
ATGTCCGCGGCGTTTAGCGA+CGG 0.569403 3_4:-57286839 None:intergenic
GTTCAGCGAGTTCTCTGCGG+TGG 0.570824 3_4:+57290672 Msa0509020:CDS
GAGAAGACAACAATCACTGA+AGG 0.573213 3_4:-57290814 None:intergenic
CTCGTTACCATCACCAACCC+CGG 0.575271 3_4:-57287412 None:intergenic
AAAATAGTTTGATGCAGACA+AGG 0.576696 3_4:+57290103 Msa0509020:CDS
TTTGTCAATTTATTGCTGGT+AGG 0.579086 3_4:-57289442 None:intergenic
AATACAAATCACACGCAACC+CGG 0.579246 3_4:-57287589 None:intergenic
CAACCAAATGAACCATTTAG+CGG 0.582099 3_4:-57288637 None:intergenic
ATTAATGATGGAAGTAGGTG+AGG 0.583952 3_4:-57286682 None:intergenic
GGAGAATTGAAGAAGATGGA+AGG 0.584272 3_4:-57286903 None:intergenic
AGTAGTAAGGACTAAAGTGA+TGG 0.584595 3_4:-57286533 None:intergenic
CAATGAAATCCCACAACAGT+AGG 0.584680 3_4:-57289085 None:intergenic
TTTGTTGGACCCGATAGGCA+TGG 0.587234 3_4:+57289766 Msa0509020:CDS
GAGAATTGAAGAAGATGGAA+GGG 0.587996 3_4:-57286902 None:intergenic
CTCAGACAGTGATACGGAGG+TGG 0.588333 3_4:+57290641 Msa0509020:CDS
CTAAAACTATCCTTGGTGGA+AGG 0.589007 3_4:-57290782 None:intergenic
TCACCATATTGATTATCATG+AGG 0.589932 3_4:-57288664 None:intergenic
TTACCGAGGCAGTGGAGAAG+CGG 0.592015 3_4:+57287538 Msa0509020:CDS
TGAGAATTTCCGGAGAATTG+GGG 0.593530 3_4:+57287443 Msa0509020:CDS
GACATCAGAAACCAAAGCAT+CGG 0.598010 3_4:+57290207 Msa0509020:CDS
TCATCACAGTCCGATTTGAG+AGG 0.598876 3_4:+57288613 Msa0509020:CDS
GAATGCAGTATGAAATTCAG+AGG 0.599731 3_4:+57289880 Msa0509020:CDS
ACCATGGGTTAAATCAGCGT+GGG 0.600324 3_4:+57289728 Msa0509020:CDS
ATATACAATGGAGCCTCCAA+AGG 0.602874 3_4:+57289477 Msa0509020:CDS
CCACATGCTCCGAGAAGCAG+AGG 0.605109 3_4:-57287495 None:intergenic
TGATATATATACCTGGACCT+TGG 0.607527 3_4:-57287945 None:intergenic
ACCTGCAGTTCAATATACAA+TGG 0.608031 3_4:+57289465 Msa0509020:CDS
TTTCAACACTCTATCATCAA+GGG 0.608260 3_4:-57290523 None:intergenic
CCTCTGCTTCTCGGAGCATG+TGG 0.611112 3_4:+57287495 Msa0509020:CDS
AGATGGAAGGGATAATAAAG+CGG 0.614914 3_4:-57286890 None:intergenic
GCCATAGCGGAGGAGTGTGT+GGG 0.615648 3_4:+57287672 Msa0509020:CDS
GGGAGACAGTTGACTACCAT+CGG 0.617296 3_4:-57289368 None:intergenic
AAAACCCAACAAAATAATAG+GGG 0.617591 3_4:-57290891 None:intergenic
CCAAAACTCACTATAACACC+CGG 0.620447 3_4:-57287696 None:intergenic
ATACGTCTCAGACAGTGATA+CGG 0.621447 3_4:+57290635 Msa0509020:CDS
GGTTACTGAAGTCACAGATG+TGG 0.622545 3_4:-57289389 None:intergenic
GGAAACTTCCAACTATTCTG+AGG 0.622677 3_4:+57290125 Msa0509020:CDS
CGGGGTTGGTGATGGTAACG+AGG 0.622810 3_4:+57287413 Msa0509020:CDS
ACTCATCTACGAGAAAATCA+AGG 0.623111 3_4:-57289912 None:intergenic
AACCGGTGGTTCATGATCAG+AGG 0.623728 3_4:-57287043 None:intergenic
CGAAAACTCTACTAACAACC+GGG 0.624716 3_4:-57287233 None:intergenic
ATCTGTGACTTCAGTAACCA+CGG 0.626780 3_4:+57289393 Msa0509020:CDS
GACCATGGGTTAAATCAGCG+TGG 0.632154 3_4:+57289727 Msa0509020:CDS
TCTGCATCAGCGAATTCCCA+AGG 0.632871 3_4:+57289051 Msa0509020:CDS
TATTATAATAATCAACTGTG+TGG 0.634421 3_4:-57286568 None:intergenic
GGACCACGACGGAAGAGATG+CGG 0.635718 3_4:-57287309 None:intergenic
AGTTTGTATTCATAAAACGA+TGG 0.638807 3_4:-57286736 None:intergenic
CTGAATCATATCAGAGACCA+AGG 0.639617 3_4:+57287928 Msa0509020:CDS
GTTACTGAAGTCACAGATGT+GGG 0.645484 3_4:-57289388 None:intergenic
GCGCAGACCAAAGACGATGG+TGG 0.648457 3_4:+57288968 Msa0509020:intron
GGTTTCGAATTCGCTTATGG+CGG 0.649803 3_4:+57287062 Msa0509020:CDS
CTTCCGCATCTCTTCCGTCG+TGG 0.654309 3_4:+57287306 Msa0509020:CDS
GCAGATTGCTGCCATAGCGG+AGG 0.654506 3_4:+57287662 Msa0509020:CDS
AGAAGACAACAATCACTGAA+GGG 0.655116 3_4:-57290813 None:intergenic
GTTAGAGAGTGGTGACTGCG+AGG 0.656028 3_4:+57287620 Msa0509020:CDS
AAATAGTTTGATGCAGACAA+GGG 0.658235 3_4:+57290104 Msa0509020:CDS
TATACCTAAGCCGAGATCCG+TGG 0.660039 3_4:-57289410 None:intergenic
AATGCAGTATGAAATTCAGA+GGG 0.664603 3_4:+57289881 Msa0509020:CDS
TCTAGTTCAAGTGTGTCCGA+TGG 0.664640 3_4:+57289352 Msa0509020:CDS
AAGCAGGATGAAGATTGGGA+CGG 0.667416 3_4:-57289559 None:intergenic
AAGTTTCACAATAGAACTAG+CGG 0.670901 3_4:-57290727 None:intergenic
ATGTTGTTTGTGCATGTCCG+CGG 0.672181 3_4:-57286852 None:intergenic
CTGCAAGAAACCATTGTCTG+TGG 0.672802 3_4:+57289936 Msa0509020:CDS
TGGGTTCAGCGAGTTCTCTG+CGG 0.688804 3_4:+57290669 Msa0509020:CDS
TGTTATGCGAAGAAGGTGAA+CGG 0.688938 3_4:-57287014 None:intergenic
TCGAACGAGAACAAGCGTCA+CGG 0.690321 3_4:-57286924 None:intergenic
CCATGGGTTAAATCAGCGTG+GGG 0.698609 3_4:+57289729 Msa0509020:CDS
AAAGCAGATTGCTGCCATAG+CGG 0.699527 3_4:+57287659 Msa0509020:CDS
TGCTCTGAGAAGCTTTACCG+AGG 0.701654 3_4:+57287524 Msa0509020:CDS
AGTTACTTGAAATTTCTGGG+TGG 0.702382 3_4:+57287843 Msa0509020:CDS
GTAGCCGTCGCTAAACGCCG+CGG 0.708476 3_4:+57286835 Msa0509020:CDS
ATGTTGTCCAAGTTATTACG+CGG 0.709217 3_4:-57289019 None:intergenic
CGTCTCAGACAGTGATACGG+AGG 0.710020 3_4:+57290638 Msa0509020:CDS
CAAGTGTACACCTTCCACCA+AGG 0.712467 3_4:+57290772 Msa0509020:CDS
TCAGCGCAGACCAAAGACGA+TGG 0.718112 3_4:+57288965 Msa0509020:intron
ATAAGCGAATTCGAAACCGG+TGG 0.727286 3_4:-57287057 None:intergenic
AGTGCTTTGAACTGTAAGCG+TGG 0.753908 3_4:-57286964 None:intergenic
AGAGAGTGGTGACTGCGAGG+TGG 0.754731 3_4:+57287623 Msa0509020:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTTATGTGAAATTATATT+TGG + chr3_4:57288223-57288242 Msa0509020:intron 10.0%
!!! AGAAATTTTGATATTAATGA+TGG - chr3_4:57286697-57286716 None:intergenic 15.0%
!! AAAATTCATTTCTTTATCTT+TGG + chr3_4:57288062-57288081 Msa0509020:intron 15.0%
!! ACTATTAAAGTATAAATCAA+TGG - chr3_4:57288899-57288918 None:intergenic 15.0%
!! ATTATTAAAACAATAGTTTG+TGG + chr3_4:57289685-57289704 Msa0509020:CDS 15.0%
!! TTGTTTATGAAATTTAGATT+AGG - chr3_4:57290261-57290280 None:intergenic 15.0%
!! TATTATAATAATCAACTGTG+TGG - chr3_4:57286571-57286590 None:intergenic 20.0%
!! AGGTTTATAAATTAGAAAAG+TGG - chr3_4:57286665-57286684 None:intergenic 20.0%
!!! AGATTCATTATGATAAGTTT+TGG + chr3_4:57287793-57287812 Msa0509020:CDS 20.0%
!! TTAGTGATAATCATAGTAAT+TGG - chr3_4:57288452-57288471 None:intergenic 20.0%
!! AATTATTTGTATAAAAACCG+TGG + chr3_4:57288857-57288876 Msa0509020:intron 20.0%
!! TTTACACAAACAAAAAGAAA+AGG - chr3_4:57288927-57288946 None:intergenic 20.0%
!! ATAAACAAACGAAAATTGAT+TGG + chr3_4:57290273-57290292 Msa0509020:CDS 20.0%
!! AATAACTTCAACAAAATTCT+TGG + chr3_4:57290555-57290574 Msa0509020:CDS 20.0%
!! ATAACTTCAACAAAATTCTT+GGG + chr3_4:57290556-57290575 Msa0509020:CDS 20.0%
!! AAAAACCCAACAAAATAATA+GGG - chr3_4:57290895-57290914 None:intergenic 20.0%
!! AAAAAACCCAACAAAATAAT+AGG - chr3_4:57290896-57290915 None:intergenic 20.0%
!!! ACGTTTAATTTAAATATGCA+AGG - chr3_4:57290976-57290995 None:intergenic 20.0%
!! TTGATATTAATGATGGAAGT+AGG - chr3_4:57286690-57286709 None:intergenic 25.0%
! AGTTTGTATTCATAAAACGA+TGG - chr3_4:57286739-57286758 None:intergenic 25.0%
! TGATAGAAATGAAAGTTATC+AGG - chr3_4:57287123-57287142 None:intergenic 25.0%
!!! TCATTATGATAAGTTTTGGT+TGG + chr3_4:57287797-57287816 Msa0509020:CDS 25.0%
! TGAAAGTTACTTGAAATTTC+TGG + chr3_4:57287839-57287858 Msa0509020:CDS 25.0%
! GAAAGTTACTTGAAATTTCT+GGG + chr3_4:57287840-57287859 Msa0509020:CDS 25.0%
! AGAGATATGATATATATACC+TGG - chr3_4:57287955-57287974 None:intergenic 25.0%
!! TAAAATATAATAAAGGGCAC+AGG - chr3_4:57288108-57288127 None:intergenic 25.0%
!!! GTCTTATTTGTATCATATGT+TGG + chr3_4:57288161-57288180 Msa0509020:intron 25.0%
!!! TTTTTTGTTGTACAGCTTAA+TGG + chr3_4:57288561-57288580 Msa0509020:intron 25.0%
! TTTCCTCATGATAATCAATA+TGG + chr3_4:57288661-57288680 Msa0509020:CDS 25.0%
!! TGCTTCAAATGAAAGATTTT+CGG + chr3_4:57288711-57288730 Msa0509020:CDS 25.0%
!! TTCTTTTCCTTCTTTATTCT+TGG + chr3_4:57289240-57289259 Msa0509020:CDS 25.0%
! ATTTACTTCAAGCTTAAGTT+TGG + chr3_4:57289513-57289532 Msa0509020:CDS 25.0%
! ATAATAGTCAAAAGTTAAGC+AGG - chr3_4:57289578-57289597 None:intergenic 25.0%
!! AGAGCTTCAAAAAGAATTTT+GGG - chr3_4:57289625-57289644 None:intergenic 25.0%
!! AAGAGCTTCAAAAAGAATTT+TGG - chr3_4:57289626-57289645 None:intergenic 25.0%
!!! TGTTTTAATAATAGCCCTTA+TGG - chr3_4:57289677-57289696 None:intergenic 25.0%
!! CATTGAAAATGTTGATAAAG+CGG + chr3_4:57289963-57289982 Msa0509020:CDS 25.0%
! CAAGATAAAAGTTGAACATA+TGG + chr3_4:57290179-57290198 Msa0509020:CDS 25.0%
! AAAACCCAACAAAATAATAG+GGG - chr3_4:57290894-57290913 None:intergenic 25.0%
!!! TTATGATAAGTTTTGGTTGG+TGG + chr3_4:57287800-57287819 Msa0509020:CDS 30.0%
!!! TATGATAAGTTTTGGTTGGT+GGG + chr3_4:57287801-57287820 Msa0509020:CDS 30.0%
TCTTCCTATTACTTCTGTTA+AGG + chr3_4:57287902-57287921 Msa0509020:CDS 30.0%
TTGTATCATATGTTGGATGT+TGG + chr3_4:57288168-57288187 Msa0509020:intron 30.0%
CAAGTTGCAAAAACAAAGTT+TGG - chr3_4:57288293-57288312 None:intergenic 30.0%
GTTCCGATTCCATTAAATTT+GGG + chr3_4:57288336-57288355 Msa0509020:intron 30.0%
! TCACCATATTGATTATCATG+AGG - chr3_4:57288667-57288686 None:intergenic 30.0%
AAATGTGAACATGAAGTTCT+TGG + chr3_4:57288688-57288707 Msa0509020:CDS 30.0%
TGGTTGAAGACTAAAGAATT+TGG + chr3_4:57288772-57288791 Msa0509020:CDS 30.0%
! AGCAAAAACATTGACTGTTA+AGG + chr3_4:57288798-57288817 Msa0509020:CDS 30.0%
TTGAGATTGATGTATTCTCT+AGG - chr3_4:57289169-57289188 None:intergenic 30.0%
TAAAGAAGGAAAAGAATTGC+TGG - chr3_4:57289236-57289255 None:intergenic 30.0%
TGGAACATATCAGTTAGATT+TGG - chr3_4:57289286-57289305 None:intergenic 30.0%
TTTGTCAATTTATTGCTGGT+AGG - chr3_4:57289445-57289464 None:intergenic 30.0%
!! AGGTTTTGTCAATTTATTGC+TGG - chr3_4:57289449-57289468 None:intergenic 30.0%
AGCTTGAAGTAAATCGATTA+GGG - chr3_4:57289507-57289526 None:intergenic 30.0%
AAGCTTGAAGTAAATCGATT+AGG - chr3_4:57289508-57289527 None:intergenic 30.0%
! TTTCTTTTTACCATGCCTAT+CGG - chr3_4:57289779-57289798 None:intergenic 30.0%
ACTGCATTCATTCATTTCTT+TGG - chr3_4:57289869-57289888 None:intergenic 30.0%
AATGCAGTATGAAATTCAGA+GGG + chr3_4:57289881-57289900 Msa0509020:CDS 30.0%
! TTGTCTGCATCAAACTATTT+TGG - chr3_4:57290104-57290123 None:intergenic 30.0%
AAAATAGTTTGATGCAGACA+AGG + chr3_4:57290103-57290122 Msa0509020:CDS 30.0%
AAATAGTTTGATGCAGACAA+GGG + chr3_4:57290104-57290123 Msa0509020:CDS 30.0%
TATTCTTTCCTCAGAATAGT+TGG - chr3_4:57290136-57290155 None:intergenic 30.0%
AGGAAAGAATATTGAGTGTA+AGG + chr3_4:57290145-57290164 Msa0509020:CDS 30.0%
GGAAAGAATATTGAGTGTAA+GGG + chr3_4:57290146-57290165 Msa0509020:CDS 30.0%
GAAAGAATATTGAGTGTAAG+GGG + chr3_4:57290147-57290166 Msa0509020:CDS 30.0%
GAAGATTCAAATCTAAAAGC+CGG - chr3_4:57290365-57290384 None:intergenic 30.0%
TATACAAATCTTGCAACCAA+AGG - chr3_4:57290458-57290477 None:intergenic 30.0%
GTTGCAAGATTTGTATAATC+AGG + chr3_4:57290461-57290480 Msa0509020:CDS 30.0%
TCAAGGGAATCAAAATCATA+TGG - chr3_4:57290510-57290529 None:intergenic 30.0%
TTTCAACACTCTATCATCAA+GGG - chr3_4:57290526-57290545 None:intergenic 30.0%
ATTTCAACACTCTATCATCA+AGG - chr3_4:57290527-57290546 None:intergenic 30.0%
!! TGATGATAGAGTGTTGAAAT+TGG + chr3_4:57290527-57290546 Msa0509020:CDS 30.0%
AAGTTTCACAATAGAACTAG+CGG - chr3_4:57290730-57290749 None:intergenic 30.0%
! ACTCAATCTAAAACTATCCT+TGG - chr3_4:57290792-57290811 None:intergenic 30.0%
TGATTGTTGTCTTCTCTATT+TGG + chr3_4:57290821-57290840 Msa0509020:three_prime_UTR 30.0%
!! TGTAACCCCTATTATTTTGT+TGG + chr3_4:57290886-57290905 Msa0509020:three_prime_UTR 30.0%
!! GTAACCCCTATTATTTTGTT+GGG + chr3_4:57290887-57290906 Msa0509020:three_prime_UTR 30.0%
!!! TTTGTTGGGTTTTTTTGTCT+AGG + chr3_4:57290901-57290920 Msa0509020:three_prime_UTR 30.0%
AATCAATGCAGACCAAAAAA+AGG + chr3_4:57291040-57291059 Msa0509020:three_prime_UTR 30.0%
AGTAGTAAGGACTAAAGTGA+TGG - chr3_4:57286536-57286555 None:intergenic 35.0%
AATAATCAACTGTGTGGAAG+TGG - chr3_4:57286565-57286584 None:intergenic 35.0%
! ATTAATGATGGAAGTAGGTG+AGG - chr3_4:57286685-57286704 None:intergenic 35.0%
! TTTAAAGCTTGGATTGCTTC+TGG - chr3_4:57286808-57286827 None:intergenic 35.0%
AGATGGAAGGGATAATAAAG+CGG - chr3_4:57286893-57286912 None:intergenic 35.0%
GAGAATTGAAGAAGATGGAA+GGG - chr3_4:57286905-57286924 None:intergenic 35.0%
! TAAAGTTGAGTTGCAGCATT+TGG + chr3_4:57287191-57287210 Msa0509020:CDS 35.0%
AGATTAAGCTTGCAATTCTC+CGG + chr3_4:57287280-57287299 Msa0509020:CDS 35.0%
!! TTAGGCTTTCCGTTTTTATC+CGG + chr3_4:57287393-57287412 Msa0509020:CDS 35.0%
AGGATGTAGATGAGAATTTC+CGG + chr3_4:57287433-57287452 Msa0509020:CDS 35.0%
ATGAGAATTTCCGGAGAATT+GGG + chr3_4:57287442-57287461 Msa0509020:CDS 35.0%
AGATTCTTGTTCGGAGTAAA+GGG + chr3_4:57287466-57287485 Msa0509020:CDS 35.0%
TCTATTGTGAACGATGATAG+TGG + chr3_4:57287729-57287748 Msa0509020:CDS 35.0%
!! GATGATAGTGGATTTGTTGA+AGG + chr3_4:57287741-57287760 Msa0509020:CDS 35.0%
!! ATTTGTTGAAGGTGTTGTTG+AGG + chr3_4:57287752-57287771 Msa0509020:CDS 35.0%
!! AAGGTGTTGTTGAGGAATTA+GGG + chr3_4:57287760-57287779 Msa0509020:CDS 35.0%
! AGTTACTTGAAATTTCTGGG+TGG + chr3_4:57287843-57287862 Msa0509020:CDS 35.0%
GAAGCCTTAACAGAAGTAAT+AGG - chr3_4:57287909-57287928 None:intergenic 35.0%
TGATATATATACCTGGACCT+TGG - chr3_4:57287948-57287967 None:intergenic 35.0%
ATATGTTGGATGTTGGATGT+TGG + chr3_4:57288175-57288194 Msa0509020:intron 35.0%
TGAAAGAAGAACCATTAGAG+AGG - chr3_4:57288268-57288287 None:intergenic 35.0%
CGTTCCGATTCCATTAAATT+TGG + chr3_4:57288335-57288354 Msa0509020:intron 35.0%
CAGCCCAAATTTAATGGAAT+CGG - chr3_4:57288342-57288361 None:intergenic 35.0%
TTGCTAACATCGATAAGCTT+GGG + chr3_4:57288405-57288424 Msa0509020:intron 35.0%
ATGGATTCATTTGTACCACT+TGG + chr3_4:57288580-57288599 Msa0509020:CDS 35.0%
CAACCAAATGAACCATTTAG+CGG - chr3_4:57288640-57288659 None:intergenic 35.0%
AACCATTGAGGTAAGTTAGA+CGG - chr3_4:57288757-57288776 None:intergenic 35.0%
! TCTTTAGTCTTCAACCATTG+AGG - chr3_4:57288769-57288788 None:intergenic 35.0%
ATTGACTGTTAAGGTGTGTA+GGG + chr3_4:57288807-57288826 Msa0509020:intron 35.0%
TGCGCTGAATGAAAGAAAAA+TGG - chr3_4:57288953-57288972 None:intergenic 35.0%
! TTGGTGGATATTAGTGAATC+TGG + chr3_4:57288992-57289011 Msa0509020:CDS 35.0%
ATGTTGTCCAAGTTATTACG+CGG - chr3_4:57289022-57289041 None:intergenic 35.0%
TGCTTTGCCAAGAATAAAGA+AGG - chr3_4:57289250-57289269 None:intergenic 35.0%
TTCTTTATTCTTGGCAAAGC+AGG + chr3_4:57289249-57289268 Msa0509020:CDS 35.0%
! ACTCAAGATCTTTTGCATTC+TGG - chr3_4:57289306-57289325 None:intergenic 35.0%
AATGCAAAAGATCTTGAGTC+AGG + chr3_4:57289307-57289326 Msa0509020:CDS 35.0%
TAGACATGTTGCATGATCTT+AGG - chr3_4:57289336-57289355 None:intergenic 35.0%
CAATTTATTGCTGGTAGGAA+AGG - chr3_4:57289440-57289459 None:intergenic 35.0%
ACCTGCAGTTCAATATACAA+TGG + chr3_4:57289465-57289484 Msa0509020:CDS 35.0%
TCCATTGTATATTGAACTGC+AGG - chr3_4:57289469-57289488 None:intergenic 35.0%
AATCGATTAGGGATTTCCTT+TGG - chr3_4:57289496-57289515 None:intergenic 35.0%
GTTTGGATGAAGAGATTATC+AGG + chr3_4:57289530-57289549 Msa0509020:CDS 35.0%
AGTTAAGCAGGATGAAGATT+GGG - chr3_4:57289566-57289585 None:intergenic 35.0%
AAGTTAAGCAGGATGAAGAT+TGG - chr3_4:57289567-57289586 None:intergenic 35.0%
!!! TCTTTTTGAAGCTCTTTCGA+AGG + chr3_4:57289630-57289649 Msa0509020:CDS 35.0%
!! ACAAAAAGTGCTAAAGACCA+TGG + chr3_4:57289712-57289731 Msa0509020:CDS 35.0%
!! CAAAAAGTGCTAAAGACCAT+GGG + chr3_4:57289713-57289732 Msa0509020:CDS 35.0%
! GACAAGTGGATGAATTTTGT+TGG + chr3_4:57289751-57289770 Msa0509020:CDS 35.0%
! TTCTTTTTACCATGCCTATC+GGG - chr3_4:57289778-57289797 None:intergenic 35.0%
TCTCTAGCTGAATTACTGTA+TGG + chr3_4:57289808-57289827 Msa0509020:CDS 35.0%
! CCACAAAAGTAAAGTTTTCC+CGG - chr3_4:57289837-57289856 None:intergenic 35.0%
GAATGCAGTATGAAATTCAG+AGG + chr3_4:57289880-57289899 Msa0509020:CDS 35.0%
ACTCATCTACGAGAAAATCA+AGG - chr3_4:57289915-57289934 None:intergenic 35.0%
TCAATGAAAACCACAGACAA+TGG - chr3_4:57289949-57289968 None:intergenic 35.0%
! TGTGATTTTTCCTGTCTTGA+TGG - chr3_4:57290019-57290038 None:intergenic 35.0%
GAACAGAAACAAACAGATGA+TGG + chr3_4:57290399-57290418 Msa0509020:CDS 35.0%
! AATCTTGCAACCAAAGGTTT+TGG - chr3_4:57290452-57290471 None:intergenic 35.0%
! CAATCTAAAACTATCCTTGG+TGG - chr3_4:57290789-57290808 None:intergenic 35.0%
AGAAGACAACAATCACTGAA+GGG - chr3_4:57290816-57290835 None:intergenic 35.0%
!!! ACACAAACACCTCCTTTTTT+TGG - chr3_4:57291055-57291074 None:intergenic 35.0%
! GAAGTGGAGTACTAGTAGTA+AGG - chr3_4:57286549-57286568 None:intergenic 40.0%
TTGCACTCTGCAATTTGAAG+AGG - chr3_4:57286603-57286622 None:intergenic 40.0%
CATTGTCTTGCTGATGATAC+TGG - chr3_4:57286778-57286797 None:intergenic 40.0%
GGAGAATTGAAGAAGATGGA+AGG - chr3_4:57286906-57286925 None:intergenic 40.0%
TCACGGAGAATTGAAGAAGA+TGG - chr3_4:57286910-57286929 None:intergenic 40.0%
TGTTATGCGAAGAAGGTGAA+CGG - chr3_4:57287017-57287036 None:intergenic 40.0%
GAAACGTTGTTATGCGAAGA+AGG - chr3_4:57287024-57287043 None:intergenic 40.0%
! TTTGTCTGTTCTTGATGACC+CGG + chr3_4:57287215-57287234 Msa0509020:CDS 40.0%
CGAAAACTCTACTAACAACC+GGG - chr3_4:57287236-57287255 None:intergenic 40.0%
GCGAAAACTCTACTAACAAC+CGG - chr3_4:57287237-57287256 None:intergenic 40.0%
AATCTCAGAGCTTCGAAAAC+CGG - chr3_4:57287265-57287284 None:intergenic 40.0%
!! TAGGCTTTCCGTTTTTATCC+GGG + chr3_4:57287394-57287413 Msa0509020:CDS 40.0%
GATGAGAATTTCCGGAGAAT+TGG + chr3_4:57287441-57287460 Msa0509020:CDS 40.0%
TGAGAATTTCCGGAGAATTG+GGG + chr3_4:57287443-57287462 Msa0509020:CDS 40.0%
GAATTGGGGAGATTCTTGTT+CGG + chr3_4:57287457-57287476 Msa0509020:CDS 40.0%
GAGATTCTTGTTCGGAGTAA+AGG + chr3_4:57287465-57287484 Msa0509020:CDS 40.0%
! GAGAGAAGGAGTTTTACCTT+TGG + chr3_4:57287560-57287579 Msa0509020:CDS 40.0%
!!! GTTTTACCTTTGGAACTTGC+CGG + chr3_4:57287570-57287589 Msa0509020:CDS 40.0%
!!! TTTTACCTTTGGAACTTGCC+GGG + chr3_4:57287571-57287590 Msa0509020:CDS 40.0%
AATACAAATCACACGCAACC+CGG - chr3_4:57287592-57287611 None:intergenic 40.0%
! GGTTGCGTGTGATTTGTATT+GGG + chr3_4:57287592-57287611 Msa0509020:CDS 40.0%
CCAAAACTCACTATAACACC+CGG - chr3_4:57287699-57287718 None:intergenic 40.0%
!! CGGGTGTTATAGTGAGTTTT+GGG + chr3_4:57287697-57287716 Msa0509020:CDS 40.0%
!! GGGTGTTATAGTGAGTTTTG+GGG + chr3_4:57287698-57287717 Msa0509020:CDS 40.0%
!! GAAGGTGTTGTTGAGGAATT+AGG + chr3_4:57287759-57287778 Msa0509020:CDS 40.0%
TTCCTTCTGTGGAGAAAGAT+TGG + chr3_4:57287868-57287887 Msa0509020:CDS 40.0%
TCCTTCTGTGGAGAAAGATT+GGG + chr3_4:57287869-57287888 Msa0509020:CDS 40.0%
CTGAATCATATCAGAGACCA+AGG + chr3_4:57287928-57287947 Msa0509020:CDS 40.0%
ATGGAATCGGAACGTGTAAA+CGG - chr3_4:57288329-57288348 None:intergenic 40.0%
TAGCTGCAGCCCAAATTTAA+TGG - chr3_4:57288348-57288367 None:intergenic 40.0%
CTTGCTAACATCGATAAGCT+TGG + chr3_4:57288404-57288423 Msa0509020:intron 40.0%
TGCTAACATCGATAAGCTTG+GGG + chr3_4:57288406-57288425 Msa0509020:intron 40.0%
GATTCATTTGTACCACTTGG+TGG + chr3_4:57288583-57288602 Msa0509020:CDS 40.0%
GATGAAAAAAAGCCACCAAG+TGG - chr3_4:57288598-57288617 None:intergenic 40.0%
! ATTTAGCGGACCTCTCAAAT+CGG - chr3_4:57288626-57288645 None:intergenic 40.0%
ACCATTGAGGTAAGTTAGAC+GGG - chr3_4:57288756-57288775 None:intergenic 40.0%
! CATTGACTGTTAAGGTGTGT+AGG + chr3_4:57288806-57288825 Msa0509020:intron 40.0%
AAACACTTGTCCTACTGTTG+TGG + chr3_4:57289075-57289094 Msa0509020:CDS 40.0%
AACACTTGTCCTACTGTTGT+GGG + chr3_4:57289076-57289095 Msa0509020:CDS 40.0%
CAATGAAATCCCACAACAGT+AGG - chr3_4:57289088-57289107 None:intergenic 40.0%
GTTACTGAAGTCACAGATGT+GGG - chr3_4:57289391-57289410 None:intergenic 40.0%
ATCTGTGACTTCAGTAACCA+CGG + chr3_4:57289393-57289412 Msa0509020:CDS 40.0%
ATATACAATGGAGCCTCCAA+AGG + chr3_4:57289477-57289496 Msa0509020:CDS 40.0%
!!! TTTTGAAGCTCTTTCGAAGG+CGG + chr3_4:57289633-57289652 Msa0509020:CDS 40.0%
ATGGCAAGATGAAGCCATAA+GGG + chr3_4:57289660-57289679 Msa0509020:CDS 40.0%
! TGAATTTTGTTGGACCCGAT+AGG + chr3_4:57289761-57289780 Msa0509020:CDS 40.0%
CTGAATTACTGTATGGAAGC+CGG + chr3_4:57289815-57289834 Msa0509020:CDS 40.0%
TGAATTACTGTATGGAAGCC+GGG + chr3_4:57289816-57289835 Msa0509020:CDS 40.0%
!! CCGGGAAAACTTTACTTTTG+TGG + chr3_4:57289834-57289853 Msa0509020:CDS 40.0%
GGAAAAATCACAGACTCACA+TGG + chr3_4:57290027-57290046 Msa0509020:CDS 40.0%
GGAAACTTCCAACTATTCTG+AGG + chr3_4:57290125-57290144 Msa0509020:CDS 40.0%
GACATCAGAAACCAAAGCAT+CGG + chr3_4:57290207-57290226 Msa0509020:CDS 40.0%
TTCCCATTTACTCGCAGATA+CGG + chr3_4:57290314-57290333 Msa0509020:CDS 40.0%
TTCTGTTCATTCTCATCAGC+TGG - chr3_4:57290387-57290406 None:intergenic 40.0%
CAACTGAGAACCAAAACCTT+TGG + chr3_4:57290439-57290458 Msa0509020:CDS 40.0%
TTGGATTTGTAAGGCACACT+CGG - chr3_4:57290583-57290602 None:intergenic 40.0%
!! GACTTCGGTTTGGATTTGTA+AGG - chr3_4:57290592-57290611 None:intergenic 40.0%
AAGCAATTGGTCGATGACTT+CGG - chr3_4:57290607-57290626 None:intergenic 40.0%
ATACGTCTCAGACAGTGATA+CGG + chr3_4:57290635-57290654 Msa0509020:CDS 40.0%
CTAAAACTATCCTTGGTGGA+AGG - chr3_4:57290785-57290804 None:intergenic 40.0%
GAGAAGACAACAATCACTGA+AGG - chr3_4:57290817-57290836 None:intergenic 40.0%
CAATGCAGACCAAAAAAAGG+AGG + chr3_4:57291043-57291062 Msa0509020:three_prime_UTR 40.0%
CTTGCTGATGATACTGGTGT+TGG - chr3_4:57286772-57286791 None:intergenic 45.0%
! CTACTGCGTCGTTTAAAGCT+TGG - chr3_4:57286819-57286838 None:intergenic 45.0%
! ATGTTGTTTGTGCATGTCCG+CGG - chr3_4:57286855-57286874 None:intergenic 45.0%
! AGTGCTTTGAACTGTAAGCG+TGG - chr3_4:57286967-57286986 None:intergenic 45.0%
AGCACTCGATCTTTGTCTCT+CGG + chr3_4:57286981-57287000 Msa0509020:CDS 45.0%
TTCCTCTGATCATGAACCAC+CGG + chr3_4:57287041-57287060 Msa0509020:CDS 45.0%
ATAAGCGAATTCGAAACCGG+TGG - chr3_4:57287060-57287079 None:intergenic 45.0%
! ACCGGTTTCGAATTCGCTTA+TGG + chr3_4:57287059-57287078 Msa0509020:CDS 45.0%
GCCATAAGCGAATTCGAAAC+CGG - chr3_4:57287063-57287082 None:intergenic 45.0%
GGTTTCGAATTCGCTTATGG+CGG + chr3_4:57287062-57287081 Msa0509020:CDS 45.0%
AACGATCTCAGGCGAATCAA+CGG + chr3_4:57287091-57287110 Msa0509020:CDS 45.0%
! AGTAGAGTTTTCGCTGAAGC+CGG + chr3_4:57287243-57287262 Msa0509020:CDS 45.0%
AGGTTACACAGAAAAACCGG+TGG - chr3_4:57287333-57287352 None:intergenic 45.0%
GGCAGGTTACACAGAAAAAC+CGG - chr3_4:57287336-57287355 None:intergenic 45.0%
! GGTTTTTCTGTGTAACCTGC+CGG + chr3_4:57287335-57287354 Msa0509020:CDS 45.0%
GCTGGGTTTGGATTTGGATT+AGG + chr3_4:57287375-57287394 Msa0509020:CDS 45.0%
!! AGGCTTTCCGTTTTTATCCG+GGG + chr3_4:57287395-57287414 Msa0509020:CDS 45.0%
!! TTTCCGTTTTTATCCGGGGT+TGG + chr3_4:57287399-57287418 Msa0509020:CDS 45.0%
TCACCAACCCCGGATAAAAA+CGG - chr3_4:57287405-57287424 None:intergenic 45.0%
!!! TTTTTATCCGGGGTTGGTGA+TGG + chr3_4:57287405-57287424 Msa0509020:CDS 45.0%
CAAGAATCTCCCCAATTCTC+CGG - chr3_4:57287455-57287474 None:intergenic 45.0%
GGGAAAAATCCTCTGCTTCT+CGG + chr3_4:57287486-57287505 Msa0509020:CDS 45.0%
! GGGTTGCGTGTGATTTGTAT+TGG + chr3_4:57287591-57287610 Msa0509020:CDS 45.0%
! GCGTGTGATTTGTATTGGGA+AGG + chr3_4:57287596-57287615 Msa0509020:CDS 45.0%
ATTGGGAAGGAGTTAGAGAG+TGG + chr3_4:57287609-57287628 Msa0509020:CDS 45.0%
AAAGCAGATTGCTGCCATAG+CGG + chr3_4:57287659-57287678 Msa0509020:CDS 45.0%
!! CCGGGTGTTATAGTGAGTTT+TGG + chr3_4:57287696-57287715 Msa0509020:CDS 45.0%
TCCCAATCTTTCTCCACAGA+AGG - chr3_4:57287873-57287892 None:intergenic 45.0%
TGAAGCAACAGCCTCTCTAA+TGG + chr3_4:57288254-57288273 Msa0509020:intron 45.0%
AACATCGATAAGCTTGGGGA+TGG + chr3_4:57288410-57288429 Msa0509020:intron 45.0%
! TCATCACAGTCCGATTTGAG+AGG + chr3_4:57288613-57288632 Msa0509020:CDS 45.0%
GATTTGAGAGGTCCGCTAAA+TGG + chr3_4:57288625-57288644 Msa0509020:CDS 45.0%
GGTCCGCTAAATGGTTCATT+TGG + chr3_4:57288634-57288653 Msa0509020:CDS 45.0%
AAGTTAGACGGGTATGGATC+AGG - chr3_4:57288745-57288764 None:intergenic 45.0%
TGAGGTAAGTTAGACGGGTA+TGG - chr3_4:57288751-57288770 None:intergenic 45.0%
ACCCGTCTAACTTACCTCAA+TGG + chr3_4:57288752-57288771 Msa0509020:CDS 45.0%
GACAGATCATAGAGTTGCCA+CGG - chr3_4:57288877-57288896 None:intergenic 45.0%
GAATTCGCTGATGCAGAACT+TGG - chr3_4:57289048-57289067 None:intergenic 45.0%
GTAGGACAAGTGTTTGCCTT+GGG - chr3_4:57289070-57289089 None:intergenic 45.0%
AGTAGGACAAGTGTTTGCCT+TGG - chr3_4:57289071-57289090 None:intergenic 45.0%
! GATTTTGCTGCTGTGGTTGT+CGG - chr3_4:57289134-57289153 None:intergenic 45.0%
! TGTCTACGATTTTGCTGCTG+TGG - chr3_4:57289141-57289160 None:intergenic 45.0%
! TCTAGTTCAAGTGTGTCCGA+TGG + chr3_4:57289352-57289371 Msa0509020:CDS 45.0%
GGTTACTGAAGTCACAGATG+TGG - chr3_4:57289392-57289411 None:intergenic 45.0%
ACTTCAGTAACCACGGATCT+CGG + chr3_4:57289400-57289419 Msa0509020:CDS 45.0%
CGATTAGGGATTTCCTTTGG+AGG - chr3_4:57289493-57289512 None:intergenic 45.0%
AAGCAGGATGAAGATTGGGA+CGG - chr3_4:57289562-57289581 None:intergenic 45.0%
GATGGCAAGATGAAGCCATA+AGG + chr3_4:57289659-57289678 Msa0509020:CDS 45.0%
! ACCATGGGTTAAATCAGCGT+GGG + chr3_4:57289728-57289747 Msa0509020:CDS 45.0%
CTGCAAGAAACCATTGTCTG+TGG + chr3_4:57289936-57289955 Msa0509020:CDS 45.0%
TTGTCTCAAGCCATCAAGAC+AGG + chr3_4:57290006-57290025 Msa0509020:CDS 45.0%
ATATTGAGTGTAAGGGGCAG+AGG + chr3_4:57290153-57290172 Msa0509020:CDS 45.0%
TGTTAGCTACACCGATGCTT+TGG - chr3_4:57290221-57290240 None:intergenic 45.0%
AGCCGTATCTGCGAGTAAAT+GGG - chr3_4:57290319-57290338 None:intergenic 45.0%
TAGCCGTATCTGCGAGTAAA+TGG - chr3_4:57290320-57290339 None:intergenic 45.0%
TACTCGCAGATACGGCTAAA+AGG + chr3_4:57290322-57290341 Msa0509020:CDS 45.0%
ACTCGCAGATACGGCTAAAA+GGG + chr3_4:57290323-57290342 Msa0509020:CDS 45.0%
GGGCACATACAACATCAAAC+CGG + chr3_4:57290343-57290362 Msa0509020:CDS 45.0%
ATTGGTCGATGACTTCGGTT+TGG - chr3_4:57290602-57290621 None:intergenic 45.0%
! TGTACACTTGAAGCTTGCTC+TGG - chr3_4:57290762-57290781 None:intergenic 45.0%
!! AACTATTAAAATATAATAAA+GGG - chr3_4:57288114-57288133 None:intergenic 5.0%
!! AAACTATTAAAATATAATAA+AGG - chr3_4:57288115-57288134 None:intergenic 5.0%
TCGAACGAGAACAAGCGTCA+CGG - chr3_4:57286927-57286946 None:intergenic 50.0%
AACCGGTGGTTCATGATCAG+AGG - chr3_4:57287046-57287065 None:intergenic 50.0%
!! TGCTCTGAGAAGCTTTACCG+AGG + chr3_4:57287524-57287543 Msa0509020:CDS 50.0%
! TCTGGGTGGATTTCCTTCTG+TGG + chr3_4:57287857-57287876 Msa0509020:CDS 50.0%
CATATCAGAGACCAAGGTCC+AGG + chr3_4:57287934-57287953 Msa0509020:CDS 50.0%
! GACCAAAGACGATGGTGGTT+TGG + chr3_4:57288973-57288992 Msa0509020:intron 50.0%
CACCAAACCACCATCGTCTT+TGG - chr3_4:57288978-57288997 None:intergenic 50.0%
! CAAAGACGATGGTGGTTTGG+TGG + chr3_4:57288976-57288995 Msa0509020:CDS 50.0%
TGGTACGCCGCGTAATAACT+TGG + chr3_4:57289012-57289031 Msa0509020:CDS 50.0%
TCTGCATCAGCGAATTCCCA+AGG + chr3_4:57289051-57289070 Msa0509020:CDS 50.0%
CTCAACTCTCATGCACCTGT+TGG + chr3_4:57289184-57289203 Msa0509020:CDS 50.0%
GACATCGTTTGAACGCCAAC+AGG - chr3_4:57289202-57289221 None:intergenic 50.0%
GGGAGACAGTTGACTACCAT+CGG - chr3_4:57289371-57289390 None:intergenic 50.0%
TATACCTAAGCCGAGATCCG+TGG - chr3_4:57289413-57289432 None:intergenic 50.0%
CTCTTTCGAAGGCGGTAAGA+TGG + chr3_4:57289641-57289660 Msa0509020:CDS 50.0%
! GACCATGGGTTAAATCAGCG+TGG + chr3_4:57289727-57289746 Msa0509020:CDS 50.0%
! CCATGGGTTAAATCAGCGTG+GGG + chr3_4:57289729-57289748 Msa0509020:CDS 50.0%
TAAATCAGCGTGGGGACAAG+TGG + chr3_4:57289737-57289756 Msa0509020:CDS 50.0%
TTTGTTGGACCCGATAGGCA+TGG + chr3_4:57289766-57289785 Msa0509020:CDS 50.0%
CGTATGCAGCTGCAAGCAAT+TGG - chr3_4:57290620-57290639 None:intergenic 50.0%
TGATACGGAGGTGGAGAACT+GGG + chr3_4:57290650-57290669 Msa0509020:CDS 50.0%
CAAGTGTACACCTTCCACCA+AGG + chr3_4:57290772-57290791 Msa0509020:CDS 50.0%
GGCGGCGATTAAACGATCTC+AGG + chr3_4:57287080-57287099 Msa0509020:CDS 55.0%
GAAAAACCGGTGGACCACGA+CGG - chr3_4:57287323-57287342 None:intergenic 55.0%
CTCGTTACCATCACCAACCC+CGG - chr3_4:57287415-57287434 None:intergenic 55.0%
GAGAAGCTTTACCGAGGCAG+TGG + chr3_4:57287530-57287549 Msa0509020:CDS 55.0%
TTACCGAGGCAGTGGAGAAG+CGG + chr3_4:57287538-57287557 Msa0509020:CDS 55.0%
GTTAGAGAGTGGTGACTGCG+AGG + chr3_4:57287620-57287639 Msa0509020:CDS 55.0%
TCAGCGCAGACCAAAGACGA+TGG + chr3_4:57288965-57288984 Msa0509020:intron 55.0%
GTAACCACGGATCTCGGCTT+AGG + chr3_4:57289406-57289425 Msa0509020:CDS 55.0%
!! CCCCACGCTGATTTAACCCA+TGG - chr3_4:57289732-57289751 None:intergenic 55.0%
CGTCTCAGACAGTGATACGG+AGG + chr3_4:57290638-57290657 Msa0509020:CDS 55.0%
CTCAGACAGTGATACGGAGG+TGG + chr3_4:57290641-57290660 Msa0509020:CDS 55.0%
GTGATACGGAGGTGGAGAAC+TGG + chr3_4:57290649-57290668 Msa0509020:CDS 55.0%
TGGGTTCAGCGAGTTCTCTG+CGG + chr3_4:57290669-57290688 Msa0509020:CDS 55.0%
ATGTCCGCGGCGTTTAGCGA+CGG - chr3_4:57286842-57286861 None:intergenic 60.0%
GGAAGAGATGCGGAAGTGGC+CGG - chr3_4:57287302-57287321 None:intergenic 60.0%
CGACGGAAGAGATGCGGAAG+TGG - chr3_4:57287306-57287325 None:intergenic 60.0%
CTTCCGCATCTCTTCCGTCG+TGG + chr3_4:57287306-57287325 Msa0509020:CDS 60.0%
GGACCACGACGGAAGAGATG+CGG - chr3_4:57287312-57287331 None:intergenic 60.0%
TCTCTTCCGTCGTGGTCCAC+CGG + chr3_4:57287314-57287333 Msa0509020:CDS 60.0%
CAAATCCAAACCCAGCCCCC+CGG - chr3_4:57287371-57287390 None:intergenic 60.0%
!! CGGGGTTGGTGATGGTAACG+AGG + chr3_4:57287413-57287432 Msa0509020:CDS 60.0%
CCACATGCTCCGAGAAGCAG+AGG - chr3_4:57287498-57287517 None:intergenic 60.0%
CCTCTGCTTCTCGGAGCATG+TGG + chr3_4:57287495-57287514 Msa0509020:CDS 60.0%
TCTCCGCTTCTCCACTGCCT+CGG - chr3_4:57287544-57287563 None:intergenic 60.0%
GCAGTGGAGAAGCGGAGAGA+AGG + chr3_4:57287546-57287565 Msa0509020:CDS 60.0%
CGCAACCCGGCAAGTTCCAA+AGG - chr3_4:57287579-57287598 None:intergenic 60.0%
AGAGAGTGGTGACTGCGAGG+TGG + chr3_4:57287623-57287642 Msa0509020:CDS 60.0%
GCAGATTGCTGCCATAGCGG+AGG + chr3_4:57287662-57287681 Msa0509020:CDS 60.0%
! TGCCATAGCGGAGGAGTGTG+TGG + chr3_4:57287671-57287690 Msa0509020:CDS 60.0%
! GCCATAGCGGAGGAGTGTGT+GGG + chr3_4:57287672-57287691 Msa0509020:CDS 60.0%
TCCCACACACTCCTCCGCTA+TGG - chr3_4:57287676-57287695 None:intergenic 60.0%
GCGCAGACCAAAGACGATGG+TGG + chr3_4:57288968-57288987 Msa0509020:intron 60.0%
GTTCAGCGAGTTCTCTGCGG+TGG + chr3_4:57290672-57290691 Msa0509020:CDS 60.0%
GTAGCCGTCGCTAAACGCCG+CGG + chr3_4:57286835-57286854 Msa0509020:CDS 65.0%
CGGGGGGCTGGGTTTGGATT+TGG + chr3_4:57287369-57287388 Msa0509020:CDS 65.0%
! AGCGGAGGAGTGTGTGGGAC+CGG + chr3_4:57287677-57287696 Msa0509020:CDS 65.0%
! GCGGAGGAGTGTGTGGGACC+GGG + chr3_4:57287678-57287697 Msa0509020:CDS 70.0%
ACCTGCCGGAGCAGCCACGC+CGG + chr3_4:57287349-57287368 Msa0509020:CDS 75.0%
! CCTGCCGGAGCAGCCACGCC+GGG + chr3_4:57287350-57287369 Msa0509020:CDS 80.0%
! CTGCCGGAGCAGCCACGCCG+GGG + chr3_4:57287351-57287370 Msa0509020:CDS 80.0%
! TGCCGGAGCAGCCACGCCGG+GGG + chr3_4:57287352-57287371 Msa0509020:CDS 80.0%
! AGCAGCCACGCCGGGGGGCT+GGG + chr3_4:57287358-57287377 Msa0509020:CDS 80.0%
! CCAAACCCAGCCCCCCGGCG+TGG - chr3_4:57287366-57287385 None:intergenic 80.0%
! CCACGCCGGGGGGCTGGGTT+TGG + chr3_4:57287363-57287382 Msa0509020:CDS 80.0%
! CCCGGCGTGGCTGCTCCGGC+AGG - chr3_4:57287353-57287372 None:intergenic 85.0%
! GCCGGAGCAGCCACGCCGGG+GGG + chr3_4:57287353-57287372 Msa0509020:CDS 85.0%
! GCCCCCCGGCGTGGCTGCTC+CGG - chr3_4:57287357-57287376 None:intergenic 85.0%
! GAGCAGCCACGCCGGGGGGC+TGG + chr3_4:57287357-57287376 Msa0509020:CDS 85.0%
Chromosome Type Strat End Strand Name
chr3_4 gene 57286526 57291121 57286526 ID=Msa0509020;Name=Msa0509020
chr3_4 mRNA 57286526 57291121 57286526 ID=Msa0509020-mRNA-1;Parent=Msa0509020;Name=Msa0509020-mRNA-1;_AED=0.01;_eAED=0.01;_QI=240|1|1|1|1|1|3|312|1089
chr3_4 exon 57286526 57287955 57286526 ID=Msa0509020-mRNA-1:exon:13061;Parent=Msa0509020-mRNA-1
chr3_4 exon 57288576 57288819 57288576 ID=Msa0509020-mRNA-1:exon:13062;Parent=Msa0509020-mRNA-1
chr3_4 exon 57288974 57291121 57288974 ID=Msa0509020-mRNA-1:exon:13063;Parent=Msa0509020-mRNA-1
chr3_4 five_prime_UTR 57286526 57286765 57286526 ID=Msa0509020-mRNA-1:five_prime_utr;Parent=Msa0509020-mRNA-1
chr3_4 CDS 57286766 57287955 57286766 ID=Msa0509020-mRNA-1:cds;Parent=Msa0509020-mRNA-1
chr3_4 CDS 57288576 57288819 57288576 ID=Msa0509020-mRNA-1:cds;Parent=Msa0509020-mRNA-1
chr3_4 CDS 57288974 57290809 57288974 ID=Msa0509020-mRNA-1:cds;Parent=Msa0509020-mRNA-1
chr3_4 three_prime_UTR 57290810 57291121 57290810 ID=Msa0509020-mRNA-1:three_prime_utr;Parent=Msa0509020-mRNA-1
Gene Sequence

>Msa0509020

ATGCCAACACCAGTATCATCAGCAAGACAATGCTTAACACCAGAAGCAATCCAAGCTTTAAACGACGCAGTAGCCGTCGCTAAACGCCGCGGACATGCACAAACAACATCGCTTCACGCAATATCCGCTTTATTATCCCTTCCATCTTCTTCAATTCTCCGTGACGCTTGTTCTCGTTCGAGAAACTCTGCTTACTCACCACGCTTACAGTTCAAAGCACTCGATCTTTGTCTCTCGGTTTCACTTGACCGTTCACCTTCTTCGCATAACAACGTTTCCTCTGATCATGAACCACCGGTTTCGAATTCGCTTATGGCGGCGATTAAACGATCTCAGGCGAATCAACGGCGTCATCCTGATAACTTTCATTTCTATCATCAACAGCAACAGTTGCAGAATCAGCAAACGTTTTCTGTTAGTTCTGTTAAAGTTGAGTTGCAGCATTTGGTTTTGTCTGTTCTTGATGACCCGGTTGTTAGTAGAGTTTTCGCTGAAGCCGGTTTTCGAAGCTCTGAGATTAAGCTTGCAATTCTCCGGCCACTTCCGCATCTCTTCCGTCGTGGTCCACCGGTTTTTCTGTGTAACCTGCCGGAGCAGCCACGCCGGGGGGCTGGGTTTGGATTTGGATTAGGCTTTCCGTTTTTATCCGGGGTTGGTGATGGTAACGAGGATGTAGATGAGAATTTCCGGAGAATTGGGGAGATTCTTGTTCGGAGTAAAGGGAAAAATCCTCTGCTTCTCGGAGCATGTGGTAACGATGCTCTGAGAAGCTTTACCGAGGCAGTGGAGAAGCGGAGAGAAGGAGTTTTACCTTTGGAACTTGCCGGGTTGCGTGTGATTTGTATTGGGAAGGAGTTAGAGAGTGGTGACTGCGAGGTGGTGAGTTTGAAGTTAAAGCAGATTGCTGCCATAGCGGAGGAGTGTGTGGGACCGGGTGTTATAGTGAGTTTTGGGGAGTTGAAGTCTATTGTGAACGATGATAGTGGATTTGTTGAAGGTGTTGTTGAGGAATTAGGGAAATTGTTGAAGATTCATTATGATAAGTTTTGGTTGGTGGGTGCTGCTGATAGTTATGAAAGTTACTTGAAATTTCTGGGTGGATTTCCTTCTGTGGAGAAAGATTGGGATTTGCAGATTCTTCCTATTACTTCTGTTAAGGCTTCTGAATCATATCAGAGACCAAGGTCCAGCTTAATGGATTCATTTGTACCACTTGGTGGCTTTTTTTCATCACAGTCCGATTTGAGAGGTCCGCTAAATGGTTCATTTGGTTGTTTTCCTCATGATAATCAATATGGTGAAAAATGTGAACATGAAGTTCTTGGTGCTTCAAATGAAAGATTTTCGGTTTCAGCTCCTGATCCATACCCGTCTAACTTACCTCAATGGTTGAAGACTAAAGAATTTGGCACAGCAAAAACATTGACTGTTAAGACCAAAGACGATGGTGGTTTGGTGGATATTAGTGAATCTGGTACGCCGCGTAATAACTTGGACAACATATGCCAAGTTCTGCATCAGCGAATTCCCAAGGCAAACACTTGTCCTACTGTTGTGGGATTTCATTGTGCTGACAACAAAAACGAAGACGCCGACAACCACAGCAGCAAAATCGTAGACAAATCACCTAGAGAATACATCAATCTCAACTCTCATGCACCTGTTGGCGTTCAAACGATGTCTGCATTACAATCCAGCAATTCTTTTCCTTCTTTATTCTTGGCAAAGCAGGAGAAAAATATTCCAAATCTAACTGATATGTTCCAGAATGCAAAAGATCTTGAGTCAGGTGACCTAAGATCATGCAACATGTCTAGTTCAAGTGTGTCCGATGGTAGTCAACTGTCTCCCACATCTGTGACTTCAGTAACCACGGATCTCGGCTTAGGTATATGCTCCTTTCCTACCAGCAATAAATTGACAAAACCTGCAGTTCAATATACAATGGAGCCTCCAAAGGAAATCCCTAATCGATTTACTTCAAGCTTAAGTTTGGATGAAGAGATTATCAGGAAGCATCCGTCCCAATCTTCATCCTGCTTAACTTTTGACTATTATCGACAAGTTGATGATGCTAGAAATCCCAAAATTCTTTTTGAAGCTCTTTCGAAGGCGGTAAGATGGCAAGATGAAGCCATAAGGGCTATTATTAAAACAATAGTTTGTGGTTCAACAAAAAGTGCTAAAGACCATGGGTTAAATCAGCGTGGGGACAAGTGGATGAATTTTGTTGGACCCGATAGGCATGGTAAAAAGAAAATTGCTGTTTCTCTAGCTGAATTACTGTATGGAAGCCGGGAAAACTTTACTTTTGTGGATCTGAGTTCCAAAGAAATGAATGAATGCAGTATGAAATTCAGAGGGAAGTCTCACCTTGATTTTCTCGTAGATGAGTGCTGCAAGAAACCATTGTCTGTGGTTTTCATTGAAAATGTTGATAAAGCGGATATAGTAGCTCAAAGCAGTTTGTCTCAAGCCATCAAGACAGGAAAAATCACAGACTCACATGGACGAGAAGTTAGTGTAAACAATGCAATATTTGTTTTTTCTTTCTTAGATTACCAAAATAGTTTGATGCAGACAAGGGAAACTTCCAACTATTCTGAGGAAAGAATATTGAGTGTAAGGGGCAGAGGTATCAAGATAAAAGTTGAACATATGGTTAGAGACATCAGAAACCAAAGCATCGGTGTAGCTAACAATTCAATAAATGTCATTCCTAATCTAAATTTCATAAACAAACGAAAATTGATTGGTGACAGTGAATTTCACGATTCCCATTTACTCGCAGATACGGCTAAAAGGGCACATACAACATCAAACCGGCTTTTAGATTTGAATCTTCCAGCTGATGAGAATGAACAGAAACAAACAGATGATGGAAACTTTGAACATGTCTCAACTGAGAACCAAAACCTTTGGTTGCAAGATTTGTATAATCAGGTTGATGAAACAGTTGTTTTTAAACCATATGATTTTGATTCCCTTGATGATAGAGTGTTGAAATTGGTAAGAAATAACTTCAACAAAATTCTTGGGTCCGAGTGTGCCTTACAAATCCAAACCGAAGTCATCGACCAATTGCTTGCAGCTGCATACGTCTCAGACAGTGATACGGAGGTGGAGAACTGGGTTCAGCGAGTTCTCTGCGGTGGATTCACTGAAGCGCGAAGAAGATACAATCTCACCGCTAGTTCTATTGTGAAACTTGTCACATGTCCAGAGCAAGCTTCAAGTGTACACCTTCCACCAAGGATAGTTTTAGATTGA
Protein sequence

>Msa0509020

MPTPVSSARQCLTPEAIQALNDAVAVAKRRGHAQTTSLHAISALLSLPSSSILRDACSRSRNSAYSPRLQFKALDLCLSVSLDRSPSSHNNVSSDHEPPVSNSLMAAIKRSQANQRRHPDNFHFYHQQQQLQNQQTFSVSSVKVELQHLVLSVLDDPVVSRVFAEAGFRSSEIKLAILRPLPHLFRRGPPVFLCNLPEQPRRGAGFGFGLGFPFLSGVGDGNEDVDENFRRIGEILVRSKGKNPLLLGACGNDALRSFTEAVEKRREGVLPLELAGLRVICIGKELESGDCEVVSLKLKQIAAIAEECVGPGVIVSFGELKSIVNDDSGFVEGVVEELGKLLKIHYDKFWLVGAADSYESYLKFLGGFPSVEKDWDLQILPITSVKASESYQRPRSSLMDSFVPLGGFFSSQSDLRGPLNGSFGCFPHDNQYGEKCEHEVLGASNERFSVSAPDPYPSNLPQWLKTKEFGTAKTLTVKTKDDGGLVDISESGTPRNNLDNICQVLHQRIPKANTCPTVVGFHCADNKNEDADNHSSKIVDKSPREYINLNSHAPVGVQTMSALQSSNSFPSLFLAKQEKNIPNLTDMFQNAKDLESGDLRSCNMSSSSVSDGSQLSPTSVTSVTTDLGLGICSFPTSNKLTKPAVQYTMEPPKEIPNRFTSSLSLDEEIIRKHPSQSSSCLTFDYYRQVDDARNPKILFEALSKAVRWQDEAIRAIIKTIVCGSTKSAKDHGLNQRGDKWMNFVGPDRHGKKKIAVSLAELLYGSRENFTFVDLSSKEMNECSMKFRGKSHLDFLVDECCKKPLSVVFIENVDKADIVAQSSLSQAIKTGKITDSHGREVSVNNAIFVFSFLDYQNSLMQTRETSNYSEERILSVRGRGIKIKVEHMVRDIRNQSIGVANNSINVIPNLNFINKRKLIGDSEFHDSHLLADTAKRAHTTSNRLLDLNLPADENEQKQTDDGNFEHVSTENQNLWLQDLYNQVDETVVFKPYDFDSLDDRVLKLVRNNFNKILGSECALQIQTEVIDQLLAAAYVSDSDTEVENWVQRVLCGGFTEARRRYNLTASSIVKLVTCPEQASSVHLPPRIVLD*